Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:27:30 (2779198): wrapper (7.7.26015): starting
17:27:30 (2779198): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 17:27:30] Arguments: --nthreads 6
[2025-10-13 17:27:30] Threads: 6
[2025-10-13 17:27:30] Checking for CVMFS
[2025-10-13 17:27:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 17:27:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 17:27:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 17:27:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 17:27:31] 2.11.5.0 3385007 5609 99564 151654 0 57 13650844 20971520 929 130560 0 11128705 99.996 189638 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-10-13 17:27:31] CVMFS is ok
[2025-10-13 17:27:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 17:27:31] Checking for apptainer binary...
[2025-10-13 17:27:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 17:27:31] Running /usr/bin/apptainer --version
[2025-10-13 17:27:31] apptainer version 1.3.6-1.el9
[2025-10-13 17:27:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 17:27:31] testio006
[2025-10-13 17:27:31] apptainer works
[2025-10-13 17:27:31] Set ATHENA_PROC_NUMBER=6
[2025-10-13 17:27:31] Set ATHENA_CORE_NUMBER=6
[2025-10-13 17:27:31] Starting ATLAS job with PandaID=6840748994
[2025-10-13 17:27:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 18:47:09]  *** The last 200 lines of the pilot log: ***
[2025-10-13 18:47:09] 2025-10-13 09:46:13,725 | INFO     | monitor loop #363: job 0:6840748994 is in state 'finished'
[2025-10-13 18:47:09] 2025-10-13 09:46:13,725 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:47:09] 2025-10-13 09:46:15,337 | INFO     | time since job start (4697s) is within the limit (172800.0s)
[2025-10-13 18:47:09] 2025-10-13 09:46:16,228 | INFO     | monitor loop #364: job 0:6840748994 is in state 'finished'
[2025-10-13 18:47:09] 2025-10-13 09:46:16,228 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:47:09] 2025-10-13 09:46:17,343 | INFO     | time since job start (4699s) is within the limit (172800.0s)
[2025-10-13 18:47:09] 2025-10-13 09:46:18,731 | INFO     | monitor loop #365: job 0:6840748994 is in state 'finished'
[2025-10-13 18:47:09] 2025-10-13 09:46:18,731 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:47:09] 2025-10-13 09:46:19,348 | INFO     | time since job start (4701s) is within the limit (172800.0s)
[2025-10-13 18:47:09] 2025-10-13 09:46:21,234 | INFO     | monitor loop #366: job 0:6840748994 is in state 'finished'
[2025-10-13 18:47:09] 2025-10-13 09:46:21,234 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:47:09] 2025-10-13 09:46:21,354 | INFO     | time since job start (4703s) is within the limit (172800.0s)
[2025-10-13 18:47:09] 2025-10-13 09:46:23,359 | INFO     | time since job start (4705s) is within the limit (172800.0s)
[2025-10-13 18:47:09] 2025-10-13 09:46:23,737 | INFO     | monitor loop #367: job 0:6840748994 is in state 'finished'
[2025-10-13 18:47:09] 2025-10-13 09:46:23,738 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:47:09] 2025-10-13 09:46:24,450 | INFO     | PID=2782982 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 18:47:09] 2025-10-13 09:46:24,450 | INFO     | .. there are 2 such processes running
[2025-10-13 18:47:09] 2025-10-13 09:46:25,451 | INFO     | time since job start (4707s) is within the limit (172800.0s)
[2025-10-13 18:47:09] 2025-10-13 09:46:26,240 | INFO     | monitor loop #368: job 0:6840748994 is in state 'finished'
[2025-10-13 18:47:09] 2025-10-13 09:46:26,241 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:47:09] 2025-10-13 09:46:27,456 | INFO     | time since job start (4709s) is within the limit (172800.0s)
[2025-10-13 18:47:09] 2025-10-13 09:46:28,744 | INFO     | monitor loop #369: job 0:6840748994 is in state 'finished'
[2025-10-13 18:47:09] 2025-10-13 09:46:28,744 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:47:09] 2025-10-13 09:46:29,461 | INFO     | time since job start (4711s) is within the limit (172800.0s)
[2025-10-13 18:47:09] 2025-10-13 09:46:31,247 | INFO     | monitor loop #370: job 0:6840748994 is in state 'finished'
[2025-10-13 18:47:09] 2025-10-13 09:46:31,247 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:47:09] 2025-10-13 09:46:31,463 | INFO     | time since job start (4713s) is within the limit (172800.0s)
[2025-10-13 18:47:09] 2025-10-13 09:46:33,464 | INFO     | time since job start (4715s) is within the limit (172800.0s)
[2025-10-13 18:47:09] 2025-10-13 09:46:33,750 | INFO     | monitor loop #371: job 0:6840748994 is in state 'finished'
[2025-10-13 18:47:09] 2025-10-13 09:46:33,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:47:09] 2025-10-13 09:46:35,468 | INFO     | time since job start (4717s) is within the limit (172800.0s)
[2025-10-13 18:47:09] 2025-10-13 09:46:36,253 | INFO     | monitor loop #372: job 0:6840748994 is in state 'finished'
[2025-10-13 18:47:09] 2025-10-13 09:46:36,253 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 18:47:09] 2025-10-13 09:46:36,911 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 18:47:09] 2025-10-13 09:46:36,914 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4049.2839374999994
[2025-10-13 18:47:09] 2025-10-13 09:46:36,917 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6840748994/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 18:47:09] 2025-10-13 09:46:36,917 | INFO     | extracted standard info from prmon json
[2025-10-13 18:47:09] 2025-10-13 09:46:36,917 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 18:47:09] 2025-10-13 09:46:36,917 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 18:47:09] 2025-10-13 09:46:36,918 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 18:47:09] 2025-10-13 09:46:36,918 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 18:47:09] 2025-10-13 09:46:36,919 | INFO     | fitting pss+swap vs Time
[2025-10-13 18:47:09] 2025-10-13 09:46:36,919 | INFO     | sum of square deviations: 101843770.0
[2025-10-13 18:47:09] 2025-10-13 09:46:36,919 | INFO     | sum of deviations: -5704929839.999998
[2025-10-13 18:47:09] 2025-10-13 09:46:36,919 | INFO     | mean x: 1760346478.0
[2025-10-13 18:47:09] 2025-10-13 09:46:36,920 | INFO     | mean y: 2562060.0289855073
[2025-10-13 18:47:09] 2025-10-13 09:46:36,920 | INFO     | -- intersect: 98610981122.6884
[2025-10-13 18:47:09] 2025-10-13 09:46:36,920 | INFO     | intersect: 98610981122.6884
[2025-10-13 18:47:09] 2025-10-13 09:46:36,920 | INFO     | chi2: 0.04546878027282142
[2025-10-13 18:47:09] 2025-10-13 09:46:36,920 | INFO     | -- intersect: 98610981122.6884
[2025-10-13 18:47:09] 2025-10-13 09:46:36,920 | INFO     | current memory leak: -56.02 B/s (using 69 data points, chi2=0.05)
[2025-10-13 18:47:09] 2025-10-13 09:46:36,920 | INFO     | could have reported an average CPU frequency of 3997 MHz (6 samples)
[2025-10-13 18:47:09] 2025-10-13 09:46:36,920 | INFO     | ..............................
[2025-10-13 18:47:09] 2025-10-13 09:46:36,921 | INFO     | . Timing measurements:
[2025-10-13 18:47:09] 2025-10-13 09:46:36,921 | INFO     | . get job = 0 s
[2025-10-13 18:47:09] 2025-10-13 09:46:36,921 | INFO     | . initial setup = 21 s
[2025-10-13 18:47:09] 2025-10-13 09:46:36,921 | INFO     | . payload setup = 3 s
[2025-10-13 18:47:09] 2025-10-13 09:46:36,921 | INFO     | . stage-in = 0 s
[2025-10-13 18:47:09] 2025-10-13 09:46:36,921 | INFO     | . payload execution = 4621 s
[2025-10-13 18:47:09] 2025-10-13 09:46:36,921 | INFO     | . stage-out = 0 s
[2025-10-13 18:47:09] 2025-10-13 09:46:36,921 | INFO     | . log creation = 0 s
[2025-10-13 18:47:09] 2025-10-13 09:46:36,921 | INFO     | ..............................
[2025-10-13 18:47:09] 2025-10-13 09:46:36,982 | INFO     | 
[2025-10-13 18:47:09] 2025-10-13 09:46:36,982 | INFO     | job summary report
[2025-10-13 18:47:09] 2025-10-13 09:46:36,982 | INFO     | --------------------------------------------------
[2025-10-13 18:47:09] 2025-10-13 09:46:36,982 | INFO     | PanDA job id: 6840748994
[2025-10-13 18:47:09] 2025-10-13 09:46:36,982 | INFO     | task id: 46676269
[2025-10-13 18:47:09] 2025-10-13 09:46:36,983 | INFO     | errors: (none)
[2025-10-13 18:47:09] 2025-10-13 09:46:36,983 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 18:47:09] 2025-10-13 09:46:36,983 | INFO     | pilot state: finished 
[2025-10-13 18:47:09] 2025-10-13 09:46:36,983 | INFO     | transexitcode: 0
[2025-10-13 18:47:09] 2025-10-13 09:46:36,983 | INFO     | exeerrorcode: 0
[2025-10-13 18:47:09] 2025-10-13 09:46:36,983 | INFO     | exeerrordiag: 
[2025-10-13 18:47:09] 2025-10-13 09:46:36,983 | INFO     | exitcode: 0
[2025-10-13 18:47:09] 2025-10-13 09:46:36,983 | INFO     | exitmsg: OK
[2025-10-13 18:47:09] 2025-10-13 09:46:36,983 | INFO     | cpuconsumptiontime: 25437 s
[2025-10-13 18:47:09] 2025-10-13 09:46:36,983 | INFO     | nevents: 400
[2025-10-13 18:47:09] 2025-10-13 09:46:36,983 | INFO     | neventsw: 0
[2025-10-13 18:47:09] 2025-10-13 09:46:36,983 | INFO     | pid: 2789754
[2025-10-13 18:47:09] 2025-10-13 09:46:36,983 | INFO     | pgrp: 2789754
[2025-10-13 18:47:09] 2025-10-13 09:46:36,983 | INFO     | corecount: 6
[2025-10-13 18:47:09] 2025-10-13 09:46:36,984 | INFO     | event service: False
[2025-10-13 18:47:09] 2025-10-13 09:46:36,984 | INFO     | sizes: {0: 2348855, 3: 2349117, 11: 2349145, 4629: 2375341, 4630: 2384339, 4631: 2384395, 4705: 2384717}
[2025-10-13 18:47:09] 2025-10-13 09:46:36,984 | INFO     | --------------------------------------------------
[2025-10-13 18:47:09] 2025-10-13 09:46:36,984 | INFO     | 
[2025-10-13 18:47:09] 2025-10-13 09:46:36,984 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 18:47:09] 2025-10-13 09:46:36,997 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 18:47:09] 2025-10-13 09:46:36,997 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 18:47:09] 2025-10-13 09:46:36,997 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 18:47:09] 2025-10-13 09:46:36,997 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 18:47:09] 2025-10-13 09:46:36,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 18:47:09] 2025-10-13 09:46:36,997 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 18:47:09] 2025-10-13 09:46:36,998 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 18:47:09] 2025-10-13 09:46:36,998 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 18:47:09] 2025-10-13 09:46:36,998 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 18:47:09] 2025-10-13 09:46:36,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 18:47:09] 2025-10-13 09:46:36,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 18:47:09] 2025-10-13 09:46:36,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 18:47:09] 2025-10-13 09:46:36,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 18:47:09] 2025-10-13 09:46:36,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 18:47:09] 2025-10-13 09:46:36,998 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 18:47:09] 2025-10-13 09:46:36,998 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 18:47:09] 2025-10-13 09:46:36,998 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 18:47:09] 2025-10-13 09:46:36,998 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 18:47:09] 2025-10-13 09:46:36,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 18:47:09] 2025-10-13 09:46:36,999 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 18:47:09] 2025-10-13 09:46:36,999 | INFO     | job 6840748994 has completed (purged errors)
[2025-10-13 18:47:09] 2025-10-13 09:46:36,999 | INFO     | overall cleanup function is called
[2025-10-13 18:47:09] 2025-10-13 09:46:38,006 | INFO     | --- collectZombieJob: --- 10, [2789754]
[2025-10-13 18:47:09] 2025-10-13 09:46:38,006 | INFO     | zombie collector waiting for pid 2789754
[2025-10-13 18:47:09] 2025-10-13 09:46:38,006 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 18:47:09] 2025-10-13 09:46:38,006 | INFO     | collected zombie processes
[2025-10-13 18:47:09] 2025-10-13 09:46:38,006 | INFO     | will attempt to kill all subprocesses of pid=2789754
[2025-10-13 18:47:09] 2025-10-13 09:46:38,079 | INFO     | process IDs to be killed: [2789754] (in reverse order)
[2025-10-13 18:47:09] 2025-10-13 09:46:38,108 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 18:47:09] 2025-10-13 09:46:38,108 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 18:47:09] 2025-10-13 09:46:38,111 | INFO     | did not find any defunct processes belonging to 2789754
[2025-10-13 18:47:09] 2025-10-13 09:46:38,113 | INFO     | did not find any defunct processes belonging to 2789754
[2025-10-13 18:47:09] 2025-10-13 09:46:38,113 | INFO     | ready for new job
[2025-10-13 18:47:09] 2025-10-13 09:46:38,113 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 18:47:09] 2025-10-13 09:46:38,114 | INFO     | ***************************************
[2025-10-13 18:47:09] 2025-10-13 09:46:38,114 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 18:47:09] 2025-10-13 09:46:38,114 | INFO     | ***************************************
[2025-10-13 18:47:09] 2025-10-13 09:46:38,114 | INFO     | 
[2025-10-13 18:47:09] 2025-10-13 09:46:38,115 | INFO     | architecture information:
[2025-10-13 18:47:09] 2025-10-13 09:46:38,115 | INFO     | executing command: cat /etc/os-release
[2025-10-13 18:47:09] 2025-10-13 09:46:38,125 | INFO     | cat /etc/os-release:
[2025-10-13 18:47:09] NAME="CentOS Linux"
[2025-10-13 18:47:09] VERSION="7 (Core)"
[2025-10-13 18:47:09] ID="centos"
[2025-10-13 18:47:09] ID_LIKE="rhel fedora"
[2025-10-13 18:47:09] VERSION_ID="7"
[2025-10-13 18:47:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 18:47:09] ANSI_COLOR="0;31"
[2025-10-13 18:47:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 18:47:09] HOME_URL="https://www.centos.org/"
[2025-10-13 18:47:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 18:47:09] 
[2025-10-13 18:47:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 18:47:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 18:47:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 18:47:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 18:47:09] 
[2025-10-13 18:47:09] 2025-10-13 09:46:38,125 | INFO     | ***************************************
[2025-10-13 18:47:09] 2025-10-13 09:46:38,627 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 18:47:09] 2025-10-13 09:46:38,636 | INFO     | sufficient remaining disk space (83175145472 B)
[2025-10-13 18:47:09] 2025-10-13 09:46:38,637 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 18:47:09] 2025-10-13 09:46:38,637 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 18:47:09] 2025-10-13 09:46:38,637 | INFO     | update_server=False
[2025-10-13 18:47:09] 2025-10-13 09:46:38,637 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 18:47:09] 2025-10-13 09:46:38,637 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:47:09] 2025-10-13 09:46:38,756 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 18:47:09] 2025-10-13 09:46:38,756 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 18:47:09] 2025-10-13 09:46:38,756 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:47:09] 2025-10-13 09:46:38,756 | INFO     | will abort loop
[2025-10-13 18:47:09] 2025-10-13 09:46:39,296 | INFO     | all data control threads have been joined
[2025-10-13 18:47:09] 2025-10-13 09:46:39,642 | INFO     | [job] retrieve thread has finished
[2025-10-13 18:47:09] 2025-10-13 09:46:39,643 | INFO     | [job] queue monitor thread has finished
[2025-10-13 18:47:09] 2025-10-13 09:46:39,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 18:47:09] 2025-10-13 09:46:39,761 | INFO     | [job] job monitor thread has finished
[2025-10-13 18:47:09] 2025-10-13 09:46:39,813 | INFO     | [data] copytool_in thread has finished
[2025-10-13 18:47:09] 2025-10-13 09:46:39,889 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 18:47:09] 2025-10-13 09:46:40,089 | INFO     | [payload] failed_post thread has finished
[2025-10-13 18:47:09] 2025-10-13 09:46:40,136 | INFO     | all payload control threads have been joined
[2025-10-13 18:47:09] 2025-10-13 09:46:40,237 | INFO     | all job control threads have been joined
[2025-10-13 18:47:09] 2025-10-13 09:46:40,288 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 18:47:09] 2025-10-13 09:46:40,301 | INFO     | [data] control thread has finished
[2025-10-13 18:47:09] 2025-10-13 09:46:40,351 | INFO     | [job] validate thread has finished
[2025-10-13 18:47:09] 2025-10-13 09:46:40,371 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 18:47:09] 2025-10-13 09:46:40,588 | INFO     | [payload] validate_post thread has finished
[2025-10-13 18:47:09] 2025-10-13 09:46:41,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 18:47:09] 2025-10-13 09:46:41,142 | INFO     | [payload] control thread has finished
[2025-10-13 18:47:09] 2025-10-13 09:46:41,238 | INFO     | [job] control thread has finished
[2025-10-13 18:47:09] 2025-10-13 09:46:41,759 | INFO     | [data] copytool_out thread has finished
[2025-10-13 18:47:09] 2025-10-13 09:46:45,048 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 18:47:09] 2025-10-13 09:46:49,037 | INFO     | job.realtimelogging is not enabled
[2025-10-13 18:47:09] 2025-10-13 09:46:50,042 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 18:47:09] 2025-10-13 09:47:03,706 | INFO     | [monitor] cgroup control has ended
[2025-10-13 18:47:09] 2025-10-13 09:47:04,425 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140499194808128)>', '<ExcThread(monitor, started 140498689836800)>']
[2025-10-13 18:47:09] 2025-10-13 09:47:08,641 | INFO     | PID=2782982 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 18:47:09] 2025-10-13 09:47:08,641 | INFO     | .. there are 2 such processes running
[2025-10-13 18:47:09] 2025-10-13 09:47:08,641 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 18:47:09] 2025-10-13 09:47:08,641 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 18:47:09] 2025-10-13 09:47:08,641 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 18:47:09] 2025-10-13 09:47:08,641 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 18:47:09] 2025-10-13 09:47:08,641 | INFO     | [monitor] control thread has ended
[2025-10-13 18:47:09] 2025-10-13 09:47:09,437 | INFO     | all workflow threads have been joined
[2025-10-13 18:47:09] 2025-10-13 09:47:09,438 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 18:47:09] 2025-10-13 09:47:09,438 | INFO     | traces error code: 0
[2025-10-13 18:47:09] 2025-10-13 09:47:09,438 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 18:47:09] 2025-10-13 09:47:09,519 [wrapper] ==== pilot stdout END ====
[2025-10-13 18:47:09] 2025-10-13 09:47:09,521 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 18:47:09] 2025-10-13 09:47:09,523 [wrapper] pilotpid: 2782982
[2025-10-13 18:47:09] 2025-10-13 09:47:09,524 [wrapper] Pilot exit status: 0
[2025-10-13 18:47:09] 2025-10-13 09:47:09,531 [wrapper] pandaids: 6840748994
[2025-10-13 18:47:09] 2025-10-13 09:47:09,557 [wrapper] cleanup supervisor_pilot 2825477 2782983
[2025-10-13 18:47:09] 2025-10-13 09:47:09,559 [wrapper] Test setup, not cleaning
[2025-10-13 18:47:09] 2025-10-13 09:47:09,561 [wrapper] apfmon messages muted
[2025-10-13 18:47:09] 2025-10-13 09:47:09,562 [wrapper] ==== wrapper stdout END ====
[2025-10-13 18:47:09] 2025-10-13 09:47:09,564 [wrapper] ==== wrapper stderr END ====
[2025-10-13 18:47:09]  *** Error codes and diagnostics ***
[2025-10-13 18:47:09]     "exeErrorCode": 0,
[2025-10-13 18:47:09]     "exeErrorDiag": "",
[2025-10-13 18:47:09]     "pilotErrorCode": 0,
[2025-10-13 18:47:09]     "pilotErrorDiag": "",
[2025-10-13 18:47:09]  *** Listing of results directory ***
[2025-10-13 18:47:09] total 411564
[2025-10-13 18:47:09] -rw-r--r--. 1 boinc boinc    557409 Oct 13 05:23 pilot3.tar.gz
[2025-10-13 18:47:09] -rw-r--r--. 1 boinc boinc      5112 Oct 13 05:24 queuedata.json
[2025-10-13 18:47:09] -rwx------. 1 boinc boinc     36292 Oct 13 05:24 runpilot2-wrapper.sh
[2025-10-13 18:47:09] -rw-r--r--. 1 boinc boinc       100 Oct 13 17:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 18:47:09] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 17:27 run_atlas
[2025-10-13 18:47:09] -rw-r--r--. 1 boinc boinc       105 Oct 13 17:27 job.xml
[2025-10-13 18:47:09] drwxrwx--x. 2 boinc boinc        68 Oct 13 17:27 shared
[2025-10-13 18:47:09] -rw-r--r--. 2 boinc boinc    569677 Oct 13 17:27 input.tar.gz
[2025-10-13 18:47:09] -rw-r--r--. 2 boinc boinc 221207015 Oct 13 17:27 EVNT.46676267._004495.pool.root.1
[2025-10-13 18:47:09] -rw-r--r--. 2 boinc boinc     15120 Oct 13 17:27 start_atlas.sh
[2025-10-13 18:47:09] -rw-r--r--. 1 boinc boinc         0 Oct 13 17:27 boinc_lockfile
[2025-10-13 18:47:09] -rw-r--r--. 1 boinc boinc      2549 Oct 13 17:27 pandaJob.out
[2025-10-13 18:47:09] -rw-------. 1 boinc boinc    972857 Oct 13 17:27 agis_schedconf.cvmfs.json
[2025-10-13 18:47:09] -rw-------. 1 boinc boinc   1560580 Oct 13 17:27 agis_ddmendpoints.agis.ALL.json
[2025-10-13 18:47:09] drwx------. 5 boinc boinc      4096 Oct 13 17:27 pilot3
[2025-10-13 18:47:09] -rw-r--r--. 1 boinc boinc      9471 Oct 13 17:48 init_data.xml
[2025-10-13 18:47:09] -rw-------. 1 boinc boinc 194396095 Oct 13 18:44 HITS.46676269._088560.pool.root.1
[2025-10-13 18:47:09] -rw-r--r--. 1 boinc boinc       529 Oct 13 18:45 boinc_task_state.xml
[2025-10-13 18:47:09] -rw-------. 1 boinc boinc      1020 Oct 13 18:45 memory_monitor_summary.json
[2025-10-13 18:47:09] -rw-------. 1 boinc boinc    279947 Oct 13 18:45 log.46676269._088560.job.log.tgz.1
[2025-10-13 18:47:09] -rw-------. 1 boinc boinc        95 Oct 13 18:46 pilot_heartbeat.json
[2025-10-13 18:47:09] -rw-------. 1 boinc boinc      7753 Oct 13 18:46 heartbeat.json
[2025-10-13 18:47:09] -rw-r--r--. 1 boinc boinc      8192 Oct 13 18:47 boinc_mmap_file
[2025-10-13 18:47:09] -rw-r--r--. 1 boinc boinc        27 Oct 13 18:47 wrapper_checkpoint.txt
[2025-10-13 18:47:09] -rw-------. 1 boinc boinc      5081 Oct 13 18:47 pilotlog.txt
[2025-10-13 18:47:09] -rw-------. 1 boinc boinc    694722 Oct 13 18:47 log.46676269._088560.job.log.1
[2025-10-13 18:47:09] -rw-------. 1 boinc boinc       357 Oct 13 18:47 output.list
[2025-10-13 18:47:09] -rw-r--r--. 1 boinc boinc       620 Oct 13 18:47 runtime_log
[2025-10-13 18:47:09] -rw-------. 1 boinc boinc    993280 Oct 13 18:47 result.tar.gz
[2025-10-13 18:47:09] -rw-------. 1 boinc boinc       641 Oct 13 18:47 w1BNDmsnHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuRlNDmYi3FMn.diag
[2025-10-13 18:47:09] -rw-r--r--. 1 boinc boinc      8661 Oct 13 18:47 runtime_log.err
[2025-10-13 18:47:09] -rw-r--r--. 1 boinc boinc     21928 Oct 13 18:47 stderr.txt
[2025-10-13 18:47:09] HITS file was successfully produced:
[2025-10-13 18:47:09] -rw-------. 1 boinc boinc 194396095 Oct 13 18:44 shared/HITS.pool.root.1
[2025-10-13 18:47:09]  *** Contents of shared directory: ***
[2025-10-13 18:47:09] total 407412
[2025-10-13 18:47:09] -rw-r--r--. 2 boinc boinc    569677 Oct 13 17:27 input.tar.gz
[2025-10-13 18:47:09] -rw-r--r--. 2 boinc boinc 221207015 Oct 13 17:27 ATLAS.root_0
[2025-10-13 18:47:09] -rw-r--r--. 2 boinc boinc     15120 Oct 13 17:27 start_atlas.sh
[2025-10-13 18:47:09] -rw-------. 1 boinc boinc 194396095 Oct 13 18:44 HITS.pool.root.1
[2025-10-13 18:47:09] -rw-------. 1 boinc boinc    993280 Oct 13 18:47 result.tar.gz
18:47:10 (2779198): run_atlas exited; CPU time 25479.123683
18:47:10 (2779198): called boinc_finish(0)

</stderr_txt>
]]>

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