Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:57:35 (29887): wrapper (7.7.26015): starting
20:57:35 (29887): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:57:35] Arguments: --nthreads 8
[2025-10-12 20:57:35] Threads: 8
[2025-10-12 20:57:35] Checking for CVMFS
[2025-10-12 20:57:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:57:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:57:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:57:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:57:36] 2.13.2.0 704839 125751 122144 151642 3 271 38997669 40960001 25828 16776704 1 301025058 99.702 234200750 35642 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 20:57:36] CVMFS is ok
[2025-10-12 20:57:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:57:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:57:36] Further information can be found at the LHC@home message board.
[2025-10-12 20:57:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:57:36] Checking for apptainer binary...
[2025-10-12 20:57:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:57:36] Running /usr/bin/apptainer --version
[2025-10-12 20:57:36] apptainer version 1.4.3-1.el9
[2025-10-12 20:57:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:57:36] c-212-4.aglt2.org
[2025-10-12 20:57:36] apptainer works
[2025-10-12 20:57:36] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:57:36] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:57:36] Starting ATLAS job with PandaID=6840531900
[2025-10-12 20:57:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:16:13]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:16:13] 2025-10-13 03:15:23,867 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:16:13] 2025-10-13 03:15:23,867 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:16:13] 2025-10-13 03:15:23,869 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:16:13] 2025-10-13 03:15:23,888 | INFO     | sum of square deviations: 762901262.8148139
[2025-10-12 23:16:13] 2025-10-13 03:15:23,888 | INFO     | sum of deviations: 34829470505.29629
[2025-10-12 23:16:13] 2025-10-13 03:15:23,888 | INFO     | mean x: 1760321194.0370371
[2025-10-12 23:16:13] 2025-10-13 03:15:23,889 | INFO     | mean y: 2406472.3407407408
[2025-10-12 23:16:13] 2025-10-13 03:15:23,889 | INFO     | -- intersect: -80363242525.73088
[2025-10-12 23:16:13] 2025-10-13 03:15:23,889 | INFO     | intersect: -80363242525.73088
[2025-10-12 23:16:13] 2025-10-13 03:15:23,889 | INFO     | chi2: 3.2275161438057967
[2025-10-12 23:16:13] 2025-10-13 03:15:23,889 | INFO     | sum of square deviations: 681236140.3076906
[2025-10-12 23:16:13] 2025-10-13 03:15:23,890 | INFO     | sum of deviations: 42481551203.6923
[2025-10-12 23:16:13] 2025-10-13 03:15:23,890 | INFO     | mean x: 1760321041.5384614
[2025-10-12 23:16:13] 2025-10-13 03:15:23,890 | INFO     | mean y: 2420253.7615384613
[2025-10-12 23:16:13] 2025-10-13 03:15:23,890 | INFO     | -- intersect: -109770335529.97751
[2025-10-12 23:16:13] 2025-10-13 03:15:23,890 | INFO     | intersect: -109770335529.97751
[2025-10-12 23:16:13] 2025-10-13 03:15:23,890 | INFO     | chi2: 2.4100727468442416
[2025-10-12 23:16:13] 2025-10-13 03:15:23,890 | INFO     | current chi2=2.4100727468442416 (change=25.327321709308283 %)
[2025-10-12 23:16:13] 2025-10-13 03:15:23,890 | INFO     | sum of square deviations: 605609833.8720003
[2025-10-12 23:16:13] 2025-10-13 03:15:23,891 | INFO     | sum of deviations: 40937442686.368
[2025-10-12 23:16:13] 2025-10-13 03:15:23,891 | INFO     | mean x: 1760320889.032
[2025-10-12 23:16:13] 2025-10-13 03:15:23,891 | INFO     | mean y: 2417138.408
[2025-10-12 23:16:13] 2025-10-13 03:15:23,891 | INFO     | -- intersect: -118990094993.74284
[2025-10-12 23:16:13] 2025-10-13 03:15:23,891 | INFO     | intersect: -118990094993.74284
[2025-10-12 23:16:13] 2025-10-13 03:15:23,891 | INFO     | chi2: 2.4017122709740164
[2025-10-12 23:16:13] 2025-10-13 03:15:23,891 | INFO     | current chi2=2.4017122709740164 (change=0.34689724122113685 %)
[2025-10-12 23:16:13] 2025-10-13 03:15:23,891 | INFO     | right removable region: 124
[2025-10-12 23:16:13] 2025-10-13 03:15:23,891 | INFO     | sum of square deviations: 681233090.3076906
[2025-10-12 23:16:13] 2025-10-13 03:15:23,910 | INFO     | sum of deviations: 5270692276.30769
[2025-10-12 23:16:13] 2025-10-13 03:15:23,910 | INFO     | mean x: 1760321346.5384614
[2025-10-12 23:16:13] 2025-10-13 03:15:23,910 | INFO     | mean y: 2461224.7384615387
[2025-10-12 23:16:13] 2025-10-13 03:15:23,910 | INFO     | -- intersect: -13617123990.696686
[2025-10-12 23:16:13] 2025-10-13 03:15:23,910 | INFO     | intersect: -13617123990.696686
[2025-10-12 23:16:13] 2025-10-13 03:15:23,911 | INFO     | chi2: 1.1113248384514134
[2025-10-12 23:16:13] 2025-10-13 03:15:23,911 | INFO     | current chi2=1.1113248384514134 (change=65.56717956053443 %)
[2025-10-12 23:16:13] 2025-10-13 03:15:23,911 | INFO     | sum of square deviations: 605611542.799999
[2025-10-12 23:16:13] 2025-10-13 03:15:23,911 | INFO     | sum of deviations: -3832032696.959998
[2025-10-12 23:16:13] 2025-10-13 03:15:23,911 | INFO     | mean x: 1760321499.04
[2025-10-12 23:16:13] 2025-10-13 03:15:23,911 | INFO     | mean y: 2479507.192
[2025-10-12 23:16:13] 2025-10-13 03:15:23,912 | INFO     | -- intersect: 11140988377.57301
[2025-10-12 23:16:13] 2025-10-13 03:15:23,912 | INFO     | intersect: 11140988377.57301
[2025-10-12 23:16:13] 2025-10-13 03:15:23,912 | INFO     | chi2: 0.9413906506426603
[2025-10-12 23:16:13] 2025-10-13 03:15:23,912 | INFO     | current chi2=0.9413906506426603 (change=15.291135582423374 %)
[2025-10-12 23:16:13] 2025-10-13 03:15:23,912 | INFO     | left removable region: 20
[2025-10-12 23:16:13] 2025-10-13 03:15:23,912 | INFO     | sum of square deviations: 348781777.8461526
[2025-10-12 23:16:13] 2025-10-13 03:15:23,912 | INFO     | sum of deviations: -2992858535.3076925
[2025-10-12 23:16:13] 2025-10-13 03:15:23,912 | INFO     | mean x: 1760321468.5384614
[2025-10-12 23:16:13] 2025-10-13 03:15:23,913 | INFO     | mean y: 2518604.076923077
[2025-10-12 23:16:13] 2025-10-13 03:15:23,913 | INFO     | -- intersect: 15107645840.180956
[2025-10-12 23:16:13] 2025-10-13 03:15:23,913 | INFO     | intersect: 15107645840.180956
[2025-10-12 23:16:13] 2025-10-13 03:15:23,913 | INFO     | chi2: 0.010160672194689196
[2025-10-12 23:16:13] 2025-10-13 03:15:23,913 | INFO     | -- intersect: 15107645840.180956
[2025-10-12 23:16:13] 2025-10-13 03:15:23,913 | INFO     | current memory leak: -8.58 B/s (using 104 data points, chi2=0.01)
[2025-10-12 23:16:13] 2025-10-13 03:15:23,913 | INFO     | could have reported an average CPU frequency of 2958 MHz (8 samples)
[2025-10-12 23:16:13] 2025-10-13 03:15:23,932 | INFO     | ..............................
[2025-10-12 23:16:13] 2025-10-13 03:15:23,932 | INFO     | . Timing measurements:
[2025-10-12 23:16:13] 2025-10-13 03:15:23,932 | INFO     | . get job = 0 s
[2025-10-12 23:16:13] 2025-10-13 03:15:23,932 | INFO     | . initial setup = 2 s
[2025-10-12 23:16:13] 2025-10-13 03:15:23,932 | INFO     | . payload setup = 9 s
[2025-10-12 23:16:13] 2025-10-13 03:15:23,932 | INFO     | . stage-in = 0 s
[2025-10-12 23:16:13] 2025-10-13 03:15:23,932 | INFO     | . payload execution = 8204 s
[2025-10-12 23:16:13] 2025-10-13 03:15:23,932 | INFO     | . stage-out = 1 s
[2025-10-12 23:16:13] 2025-10-13 03:15:23,932 | INFO     | . log creation = 0 s
[2025-10-12 23:16:13] 2025-10-13 03:15:23,932 | INFO     | ..............................
[2025-10-12 23:16:13] 2025-10-13 03:15:24,076 | INFO     | 
[2025-10-12 23:16:13] 2025-10-13 03:15:24,077 | INFO     | job summary report
[2025-10-12 23:16:13] 2025-10-13 03:15:24,077 | INFO     | --------------------------------------------------
[2025-10-12 23:16:13] 2025-10-13 03:15:24,077 | INFO     | PanDA job id: 6840531900
[2025-10-12 23:16:13] 2025-10-13 03:15:24,077 | INFO     | task id: 46676269
[2025-10-12 23:16:13] 2025-10-13 03:15:24,077 | INFO     | errors: (none)
[2025-10-12 23:16:13] 2025-10-13 03:15:24,077 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:16:13] 2025-10-13 03:15:24,077 | INFO     | pilot state: finished 
[2025-10-12 23:16:13] 2025-10-13 03:15:24,077 | INFO     | transexitcode: 0
[2025-10-12 23:16:13] 2025-10-13 03:15:24,077 | INFO     | exeerrorcode: 0
[2025-10-12 23:16:13] 2025-10-13 03:15:24,077 | INFO     | exeerrordiag: 
[2025-10-12 23:16:13] 2025-10-13 03:15:24,077 | INFO     | exitcode: 0
[2025-10-12 23:16:13] 2025-10-13 03:15:24,077 | INFO     | exitmsg: OK
[2025-10-12 23:16:13] 2025-10-13 03:15:24,077 | INFO     | cpuconsumptiontime: 33749 s
[2025-10-12 23:16:13] 2025-10-13 03:15:24,077 | INFO     | nevents: 400
[2025-10-12 23:16:13] 2025-10-13 03:15:24,078 | INFO     | neventsw: 0
[2025-10-12 23:16:13] 2025-10-13 03:15:24,078 | INFO     | pid: 40087
[2025-10-12 23:16:13] 2025-10-13 03:15:24,078 | INFO     | pgrp: 40087
[2025-10-12 23:16:13] 2025-10-13 03:15:24,078 | INFO     | corecount: 8
[2025-10-12 23:16:13] 2025-10-13 03:15:24,078 | INFO     | event service: False
[2025-10-12 23:16:13] 2025-10-13 03:15:24,078 | INFO     | sizes: {0: 2348851, 6: 2349113, 11: 2349141, 8218: 2376907, 8220: 2385905, 8221: 2385961, 8233: 2386283}
[2025-10-12 23:16:13] 2025-10-13 03:15:24,078 | INFO     | --------------------------------------------------
[2025-10-12 23:16:13] 2025-10-13 03:15:24,078 | INFO     | 
[2025-10-12 23:16:13] 2025-10-13 03:15:24,078 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 23:16:13] 2025-10-13 03:15:24,116 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:16:13] 2025-10-13 03:15:24,116 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:16:13] 2025-10-13 03:15:24,117 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:16:13] 2025-10-13 03:15:24,117 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:16:13] 2025-10-13 03:15:24,117 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:16:13] 2025-10-13 03:15:24,117 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:16:13] 2025-10-13 03:15:24,117 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:16:13] 2025-10-13 03:15:24,117 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:16:13] 2025-10-13 03:15:24,117 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:16:13] 2025-10-13 03:15:24,117 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:16:13] 2025-10-13 03:15:24,117 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:16:13] 2025-10-13 03:15:24,117 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:16:13] 2025-10-13 03:15:24,117 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:16:13] 2025-10-13 03:15:24,118 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:16:13] 2025-10-13 03:15:24,118 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:16:13] 2025-10-13 03:15:24,118 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:16:13] 2025-10-13 03:15:24,118 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:16:13] 2025-10-13 03:15:24,118 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:16:13] 2025-10-13 03:15:24,118 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:16:13] 2025-10-13 03:15:24,118 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:16:13] 2025-10-13 03:15:24,118 | INFO     | job 6840531900 has completed (purged errors)
[2025-10-12 23:16:13] 2025-10-13 03:15:24,118 | INFO     | overall cleanup function is called
[2025-10-12 23:16:13] 2025-10-13 03:15:25,126 | INFO     | --- collectZombieJob: --- 10, [40087]
[2025-10-12 23:16:13] 2025-10-13 03:15:25,126 | INFO     | zombie collector waiting for pid 40087
[2025-10-12 23:16:13] 2025-10-13 03:15:25,126 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:16:13] 2025-10-13 03:15:25,126 | INFO     | collected zombie processes
[2025-10-12 23:16:13] 2025-10-13 03:15:25,126 | INFO     | will attempt to kill all subprocesses of pid=40087
[2025-10-12 23:16:13] 2025-10-13 03:15:26,368 | INFO     | process IDs to be killed: [40087] (in reverse order)
[2025-10-12 23:16:13] 2025-10-13 03:15:26,702 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:16:13] 2025-10-13 03:15:26,703 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:16:13] 2025-10-13 03:15:26,720 | INFO     | did not find any defunct processes belonging to 40087
[2025-10-12 23:16:13] 2025-10-13 03:15:26,736 | INFO     | did not find any defunct processes belonging to 40087
[2025-10-12 23:16:13] 2025-10-13 03:15:26,737 | INFO     | ready for new job
[2025-10-12 23:16:13] 2025-10-13 03:15:26,737 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:16:13] 2025-10-13 03:15:26,739 | INFO     | ***************************************
[2025-10-12 23:16:13] 2025-10-13 03:15:26,739 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:16:13] 2025-10-13 03:15:26,739 | INFO     | ***************************************
[2025-10-12 23:16:13] 2025-10-13 03:15:26,739 | INFO     | 
[2025-10-12 23:16:13] 2025-10-13 03:15:26,744 | INFO     | architecture information:
[2025-10-12 23:16:13] 2025-10-13 03:15:26,745 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:16:13] 2025-10-13 03:15:26,803 | INFO     | cat /etc/os-release:
[2025-10-12 23:16:13] NAME="CentOS Linux"
[2025-10-12 23:16:13] VERSION="7 (Core)"
[2025-10-12 23:16:13] ID="centos"
[2025-10-12 23:16:13] ID_LIKE="rhel fedora"
[2025-10-12 23:16:13] VERSION_ID="7"
[2025-10-12 23:16:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:16:13] ANSI_COLOR="0;31"
[2025-10-12 23:16:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:16:13] HOME_URL="https://www.centos.org/"
[2025-10-12 23:16:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:16:13] 
[2025-10-12 23:16:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:16:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:16:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:16:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:16:13] 
[2025-10-12 23:16:13] 2025-10-13 03:15:26,803 | INFO     | ***************************************
[2025-10-12 23:16:13] 2025-10-13 03:15:27,306 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 23:16:13] 2025-10-13 03:15:27,446 | INFO     | sufficient remaining disk space (127496355840 B)
[2025-10-12 23:16:13] 2025-10-13 03:15:27,446 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:16:13] 2025-10-13 03:15:27,446 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:16:13] 2025-10-13 03:15:27,446 | INFO     | update_server=False
[2025-10-12 23:16:13] 2025-10-13 03:15:27,447 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:16:13] 2025-10-13 03:15:27,447 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:16:13] 2025-10-13 03:15:27,447 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:16:13] 2025-10-13 03:15:27,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:16:13] 2025-10-13 03:15:27,448 | INFO     | aborting loop
[2025-10-12 23:16:13] 2025-10-13 03:15:27,473 | INFO     | all data control threads have been joined
[2025-10-12 23:16:13] 2025-10-13 03:15:28,452 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:16:13] 2025-10-13 03:15:28,459 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:16:13] 2025-10-13 03:15:28,478 | INFO     | [data] control thread has finished
[2025-10-12 23:16:13] 2025-10-13 03:15:28,610 | INFO     | all payload control threads have been joined
[2025-10-12 23:16:13] 2025-10-13 03:15:28,665 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:16:13] 2025-10-13 03:15:29,013 | INFO     | all job control threads have been joined
[2025-10-12 23:16:13] 2025-10-13 03:15:29,101 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:16:13] 2025-10-13 03:15:29,241 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:16:13] 2025-10-13 03:15:29,255 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:16:13] 2025-10-13 03:15:29,293 | INFO     | [job] validate thread has finished
[2025-10-12 23:16:13] 2025-10-13 03:15:29,362 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:16:13] 2025-10-13 03:15:29,454 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:16:13] 2025-10-13 03:15:29,468 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:16:13] 2025-10-13 03:15:29,492 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:16:13] 2025-10-13 03:15:29,616 | INFO     | [payload] control thread has finished
[2025-10-12 23:16:13] 2025-10-13 03:15:30,019 | INFO     | [job] control thread has finished
[2025-10-12 23:16:13] 2025-10-13 03:15:30,107 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:16:13] 2025-10-13 03:15:31,466 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:16:13] 2025-10-13 03:15:37,852 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:16:13] 2025-10-13 03:15:38,859 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:16:13] 2025-10-13 03:15:58,272 | INFO     | PID=33553 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 23:16:13] 2025-10-13 03:15:58,272 | INFO     | .. there are 24 such processes running
[2025-10-12 23:16:13] 2025-10-13 03:15:58,273 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:16:13] 2025-10-13 03:15:58,273 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:16:13] 2025-10-13 03:15:58,274 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:16:13] 2025-10-13 03:16:06,176 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:16:13] 2025-10-13 03:16:07,655 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140535302571840)>', '<ExcThread(monitor, started 140534786012928)>']
[2025-10-12 23:16:13] 2025-10-13 03:16:08,331 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:16:13] 2025-10-13 03:16:08,332 | INFO     | [monitor] control thread has ended
[2025-10-12 23:16:13] 2025-10-13 03:16:12,681 | INFO     | all workflow threads have been joined
[2025-10-12 23:16:13] 2025-10-13 03:16:12,681 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:16:13] 2025-10-13 03:16:12,681 | INFO     | traces error code: 0
[2025-10-12 23:16:13] 2025-10-13 03:16:12,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:16:13] 2025-10-13 03:16:13,019 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:16:13] 2025-10-13 03:16:13,031 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:16:13] 2025-10-13 03:16:13,036 [wrapper] pilotpid: 33553
[2025-10-12 23:16:13] 2025-10-13 03:16:13,039 [wrapper] Pilot exit status: 0
[2025-10-12 23:16:13] 2025-10-13 03:16:13,068 [wrapper] pandaids: 6840531900
[2025-10-12 23:16:13] 2025-10-13 03:16:13,181 [wrapper] cleanup supervisor_pilot  361343 33554
[2025-10-12 23:16:13] 2025-10-13 03:16:13,194 [wrapper] Test setup, not cleaning
[2025-10-12 23:16:13] 2025-10-13 03:16:13,198 [wrapper] apfmon messages muted
[2025-10-12 23:16:13] 2025-10-13 03:16:13,201 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:16:13] 2025-10-13 03:16:13,204 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:16:13]  *** Error codes and diagnostics ***
[2025-10-12 23:16:13]     "exeErrorCode": 0,
[2025-10-12 23:16:13]     "exeErrorDiag": "",
[2025-10-12 23:16:13]     "pilotErrorCode": 0,
[2025-10-12 23:16:13]     "pilotErrorDiag": "",
[2025-10-12 23:16:13]  *** Listing of results directory ***
[2025-10-12 23:16:13] total 410188
[2025-10-12 23:16:13] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 13:57 pilot3.tar.gz
[2025-10-12 23:16:13] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 14:17 queuedata.json
[2025-10-12 23:16:13] -rwx------. 1 boincer umatlas     36292 Oct 12 14:17 runpilot2-wrapper.sh
[2025-10-12 23:16:13] -rw-r--r--. 1 boincer umatlas       100 Oct 12 20:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:16:13] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 20:57 run_atlas
[2025-10-12 23:16:13] -rw-r--r--. 1 boincer umatlas       105 Oct 12 20:57 job.xml
[2025-10-12 23:16:13] -rw-r--r--. 2 boincer umatlas 222896861 Oct 12 20:57 EVNT.46676267._004397.pool.root.1
[2025-10-12 23:16:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:57 start_atlas.sh
[2025-10-12 23:16:13] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 20:57 shared
[2025-10-12 23:16:13] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 20:57 input.tar.gz
[2025-10-12 23:16:13] -rw-r--r--. 1 boincer umatlas         0 Oct 12 20:57 boinc_lockfile
[2025-10-12 23:16:13] -rw-r--r--. 1 boincer umatlas      2547 Oct 12 20:57 pandaJob.out
[2025-10-12 23:16:13] -rw-------. 1 boincer umatlas    975603 Oct 12 20:57 agis_schedconf.cvmfs.json
[2025-10-12 23:16:13] -rw-------. 1 boincer umatlas   1560580 Oct 12 20:57 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:16:13] drwx------. 5 boincer umatlas      4096 Oct 12 20:57 pilot3
[2025-10-12 23:16:13] -rw-r--r--. 1 boincer umatlas      6946 Oct 12 23:11 init_data.xml
[2025-10-12 23:16:13] -rw-------. 1 boincer umatlas 190201470 Oct 12 23:14 HITS.46676269._085921.pool.root.1
[2025-10-12 23:16:13] -rw-r--r--. 1 boincer umatlas       530 Oct 12 23:14 boinc_task_state.xml
[2025-10-12 23:16:13] -rw-------. 1 boincer umatlas      1047 Oct 12 23:15 memory_monitor_summary.json
[2025-10-12 23:16:13] -rw-------. 1 boincer umatlas    363825 Oct 12 23:15 log.46676269._085921.job.log.tgz.1
[2025-10-12 23:16:13] -rw-------. 1 boincer umatlas      7792 Oct 12 23:15 heartbeat.json
[2025-10-12 23:16:13] -rw-------. 1 boincer umatlas        95 Oct 12 23:15 pilot_heartbeat.json
[2025-10-12 23:16:13] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:16 boinc_mmap_file
[2025-10-12 23:16:13] -rw-r--r--. 1 boincer umatlas        27 Oct 12 23:16 wrapper_checkpoint.txt
[2025-10-12 23:16:13] -rw-------. 1 boincer umatlas      4895 Oct 12 23:16 pilotlog.txt
[2025-10-12 23:16:13] -rw-------. 1 boincer umatlas   1150572 Oct 12 23:16 log.46676269._085921.job.log.1
[2025-10-12 23:16:13] -rw-------. 1 boincer umatlas       357 Oct 12 23:16 output.list
[2025-10-12 23:16:13] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:16 runtime_log
[2025-10-12 23:16:13] -rw-------. 1 boincer umatlas   1536000 Oct 12 23:16 result.tar.gz
[2025-10-12 23:16:13] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 23:16 runtime_log.err
[2025-10-12 23:16:13] -rw-------. 1 boincer umatlas       655 Oct 12 23:16 RmKODmNoFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmL1kNDmBFxcqm.diag
[2025-10-12 23:16:13] -rw-r--r--. 1 boincer umatlas     20922 Oct 12 23:16 stderr.txt
[2025-10-12 23:16:13] HITS file was successfully produced:
[2025-10-12 23:16:13] -rw-------. 1 boincer umatlas 190201470 Oct 12 23:14 shared/HITS.pool.root.1
[2025-10-12 23:16:13]  *** Contents of shared directory: ***
[2025-10-12 23:16:13] total 405504
[2025-10-12 23:16:13] -rw-r--r--. 2 boincer umatlas 222896861 Oct 12 20:57 ATLAS.root_0
[2025-10-12 23:16:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:57 start_atlas.sh
[2025-10-12 23:16:13] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 20:57 input.tar.gz
[2025-10-12 23:16:13] -rw-------. 1 boincer umatlas 190201470 Oct 12 23:14 HITS.pool.root.1
[2025-10-12 23:16:13] -rw-------. 1 boincer umatlas   1536000 Oct 12 23:16 result.tar.gz
23:16:15 (29887): run_atlas exited; CPU time 33969.819929
23:16:15 (29887): called boinc_finish(0)

</stderr_txt>
]]>

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