Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:40:03 (621404): wrapper (7.7.26015): starting
21:40:03 (621404): wrapper: running run_atlas (--nthreads 11)
[2025-10-12 21:40:03] Arguments: --nthreads 11
[2025-10-12 21:40:03] Threads: 11
[2025-10-12 21:40:03] Checking for CVMFS
[2025-10-12 21:40:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:40:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:40:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:40:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:40:03] 2.13.2.0 2216807 130034 425140 151643 2 188 35789030 40960001 1175 16776704 30 268515173 99.728 199491595 21781 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 21:40:03] CVMFS is ok
[2025-10-12 21:40:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:40:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:40:03] Further information can be found at the LHC@home message board.
[2025-10-12 21:40:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:40:03] Checking for apptainer binary...
[2025-10-12 21:40:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:40:03] Running /usr/bin/apptainer --version
[2025-10-12 21:40:04] apptainer version 1.4.3-1.el9
[2025-10-12 21:40:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:40:04] c7-11-11.aglt2.org
[2025-10-12 21:40:04] apptainer works
[2025-10-12 21:40:04] Set ATHENA_PROC_NUMBER=11
[2025-10-12 21:40:04] Set ATHENA_CORE_NUMBER=11
[2025-10-12 21:40:04] Starting ATLAS job with PandaID=6840749214
[2025-10-12 21:40:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:16:20]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:16:20]  status_code=0
[2025-10-12 22:16:20]  storage_token=
[2025-10-12 22:16:20]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6840749214/log.46676269._088735.job.log.tgz.1
[2025-10-12 22:16:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/17/7d/log.46676269._088735.job.log.tgz.1
[2025-10-12 22:16:20]  workdir=None
[2025-10-12 22:16:20] ]
[2025-10-12 22:16:20] 2025-10-13 02:15:28,528 | INFO     | transferring file log.46676269._088735.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6840749214/log.46676269._088735.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 22:16:20] 2025-10-13 02:15:28,528 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6840749214/log.46676269._088735.job.log.tgz.1 /tmp/boinchome/slots/4/log.46676269._088735.job
[2025-10-12 22:16:20] 2025-10-13 02:15:28,542 | INFO     | adding to output.list: log.46676269._088735.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/17/7d/log.46676269._088735.job.log.tg
[2025-10-12 22:16:20] 2025-10-13 02:15:28,543 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 22:16:20] 2025-10-13 02:15:28,543 | INFO     | summary of transferred files:
[2025-10-12 22:16:20] 2025-10-13 02:15:28,543 | INFO     |  -- lfn=log.46676269._088735.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 22:16:20] 2025-10-13 02:15:28,543 | INFO     | stage-out finished correctly
[2025-10-12 22:16:20] 2025-10-13 02:15:29,287 | INFO     | time since job start (2117s) is within the limit (172800.0s)
[2025-10-12 22:16:20] 2025-10-13 02:15:30,520 | INFO     | PID=625867 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 22:16:20] 2025-10-13 02:15:30,520 | INFO     | .. there are 5 such processes running
[2025-10-12 22:16:20] 2025-10-13 02:15:30,554 | INFO     | monitor loop #163: job 0:6840749214 is in state 'finished'
[2025-10-12 22:16:20] 2025-10-13 02:15:30,554 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:16:20] 2025-10-13 02:15:30,647 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 22:16:20] 2025-10-13 02:15:31,521 | INFO     | time since job start (2119s) is within the limit (172800.0s)
[2025-10-12 22:16:20] 2025-10-13 02:15:33,055 | INFO     | monitor loop #164: job 0:6840749214 is in state 'finished'
[2025-10-12 22:16:20] 2025-10-13 02:15:33,055 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:16:20] 2025-10-13 02:15:33,507 | INFO     | job 6840749214 has state=finished
[2025-10-12 22:16:20] 2025-10-13 02:15:33,508 | INFO     | preparing for final server update for job 6840749214 in state='finished'
[2025-10-12 22:16:20] 2025-10-13 02:15:33,508 | INFO     | this job has now completed (state=finished)
[2025-10-12 22:16:20] 2025-10-13 02:15:33,508 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 22:16:20] 2025-10-13 02:15:33,508 | INFO     | log transfer has been attempted: DONE
[2025-10-12 22:16:20] 2025-10-13 02:15:33,509 | INFO     | job 6840749214 has finished - writing final server update
[2025-10-12 22:16:20] 2025-10-13 02:15:33,509 | INFO     | total number of processed events: 400 (read)
[2025-10-12 22:16:20] 2025-10-13 02:15:33,509 | INFO     | executing command: lscpu
[2025-10-12 22:16:20] 2025-10-13 02:15:33,526 | INFO     | time since job start (2121s) is within the limit (172800.0s)
[2025-10-12 22:16:20] 2025-10-13 02:15:33,558 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 22:16:20] 2025-10-13 02:15:35,532 | INFO     | time since job start (2123s) is within the limit (172800.0s)
[2025-10-12 22:16:20] 2025-10-13 02:15:35,558 | INFO     | monitor loop #165: job 0:6840749214 is in state 'finished'
[2025-10-12 22:16:20] 2025-10-13 02:15:35,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:16:20] 2025-10-13 02:15:36,572 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 22:16:20] 2025-10-13 02:15:36,576 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3007.4631093749986
[2025-10-12 22:16:20] 2025-10-13 02:15:36,583 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6840749214/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:16:20] 2025-10-13 02:15:36,583 | INFO     | extracted standard info from prmon json
[2025-10-12 22:16:20] 2025-10-13 02:15:36,583 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:16:20] 2025-10-13 02:15:36,583 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:16:20] 2025-10-13 02:15:36,584 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:16:20] 2025-10-13 02:15:36,584 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:16:20] 2025-10-13 02:15:36,584 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:16:20] 2025-10-13 02:15:36,585 | INFO     | sum of square deviations: 6798267.0
[2025-10-12 22:16:20] 2025-10-13 02:15:36,585 | INFO     | sum of deviations: -723508129.0
[2025-10-12 22:16:20] 2025-10-13 02:15:36,585 | INFO     | mean x: 1760320762.5
[2025-10-12 22:16:20] 2025-10-13 02:15:36,585 | INFO     | mean y: 2505207.714285714
[2025-10-12 22:16:20] 2025-10-13 02:15:36,585 | INFO     | -- intersect: 187345306147.45798
[2025-10-12 22:16:20] 2025-10-13 02:15:36,585 | INFO     | intersect: 187345306147.45798
[2025-10-12 22:16:20] 2025-10-13 02:15:36,585 | INFO     | chi2: 0.019157468179251527
[2025-10-12 22:16:20] 2025-10-13 02:15:36,585 | INFO     | -- intersect: 187345306147.45798
[2025-10-12 22:16:20] 2025-10-13 02:15:36,585 | INFO     | current memory leak: -106.43 B/s (using 28 data points, chi2=0.02)
[2025-10-12 22:16:20] 2025-10-13 02:15:36,585 | INFO     | could have reported an average CPU frequency of 3029 MHz (5 samples)
[2025-10-12 22:16:20] 2025-10-13 02:15:36,585 | INFO     | ..............................
[2025-10-12 22:16:20] 2025-10-13 02:15:36,585 | INFO     | . Timing measurements:
[2025-10-12 22:16:20] 2025-10-13 02:15:36,585 | INFO     | . get job = 0 s
[2025-10-12 22:16:20] 2025-10-13 02:15:36,586 | INFO     | . initial setup = 2 s
[2025-10-12 22:16:20] 2025-10-13 02:15:36,586 | INFO     | . payload setup = 3 s
[2025-10-12 22:16:20] 2025-10-13 02:15:36,586 | INFO     | . stage-in = 0 s
[2025-10-12 22:16:20] 2025-10-13 02:15:36,586 | INFO     | . payload execution = 2092 s
[2025-10-12 22:16:20] 2025-10-13 02:15:36,586 | INFO     | . stage-out = 0 s
[2025-10-12 22:16:20] 2025-10-13 02:15:36,586 | INFO     | . log creation = 0 s
[2025-10-12 22:16:20] 2025-10-13 02:15:36,586 | INFO     | ..............................
[2025-10-12 22:16:20] 2025-10-13 02:15:36,642 | INFO     | 
[2025-10-12 22:16:20] 2025-10-13 02:15:36,642 | INFO     | job summary report
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | --------------------------------------------------
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | PanDA job id: 6840749214
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | task id: 46676269
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | errors: (none)
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | pilot state: finished 
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | transexitcode: 0
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | exeerrorcode: 0
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | exeerrordiag: 
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | exitcode: 0
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | exitmsg: OK
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | cpuconsumptiontime: 20792 s
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | nevents: 400
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | neventsw: 0
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | pid: 632816
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | pgrp: 632816
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | corecount: 11
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | event service: False
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | sizes: {0: 2348633, 1: 2348832, 4: 2349094, 11: 2349122, 2100: 2374238, 2101: 2374237, 2103: 2383419, 2105: 2383475, 2111: 2383701}
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | --------------------------------------------------
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | 
[2025-10-12 22:16:20] 2025-10-13 02:15:36,643 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 22:16:20] 2025-10-13 02:15:36,658 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:16:20] 2025-10-13 02:15:36,659 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:16:20] 2025-10-13 02:15:36,659 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:16:20] 2025-10-13 02:15:36,659 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:16:20] 2025-10-13 02:15:36,659 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:16:20] 2025-10-13 02:15:36,659 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:16:20] 2025-10-13 02:15:36,659 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:16:20] 2025-10-13 02:15:36,659 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:16:20] 2025-10-13 02:15:36,659 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:16:20] 2025-10-13 02:15:36,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:16:20] 2025-10-13 02:15:36,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:16:20] 2025-10-13 02:15:36,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:16:20] 2025-10-13 02:15:36,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:16:20] 2025-10-13 02:15:36,659 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:16:20] 2025-10-13 02:15:36,659 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:16:20] 2025-10-13 02:15:36,659 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:16:20] 2025-10-13 02:15:36,659 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:16:20] 2025-10-13 02:15:36,659 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:16:20] 2025-10-13 02:15:36,659 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:16:20] 2025-10-13 02:15:36,659 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:16:20] 2025-10-13 02:15:36,660 | INFO     | job 6840749214 has completed (purged errors)
[2025-10-12 22:16:20] 2025-10-13 02:15:36,660 | INFO     | overall cleanup function is called
[2025-10-12 22:16:20] 2025-10-13 02:15:37,667 | INFO     | --- collectZombieJob: --- 10, [632816]
[2025-10-12 22:16:20] 2025-10-13 02:15:37,667 | INFO     | zombie collector waiting for pid 632816
[2025-10-12 22:16:20] 2025-10-13 02:15:37,667 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:16:20] 2025-10-13 02:15:37,667 | INFO     | collected zombie processes
[2025-10-12 22:16:20] 2025-10-13 02:15:37,668 | INFO     | will attempt to kill all subprocesses of pid=632816
[2025-10-12 22:16:20] 2025-10-13 02:15:37,844 | INFO     | process IDs to be killed: [632816] (in reverse order)
[2025-10-12 22:16:20] 2025-10-13 02:15:37,912 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:16:20] 2025-10-13 02:15:37,912 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:16:20] 2025-10-13 02:15:37,920 | INFO     | did not find any defunct processes belonging to 632816
[2025-10-12 22:16:20] 2025-10-13 02:15:37,926 | INFO     | did not find any defunct processes belonging to 632816
[2025-10-12 22:16:20] 2025-10-13 02:15:37,926 | INFO     | ready for new job
[2025-10-12 22:16:20] 2025-10-13 02:15:37,926 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:16:20] 2025-10-13 02:15:37,927 | INFO     | ***************************************
[2025-10-12 22:16:20] 2025-10-13 02:15:37,927 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:16:20] 2025-10-13 02:15:37,927 | INFO     | ***************************************
[2025-10-12 22:16:20] 2025-10-13 02:15:37,927 | INFO     | 
[2025-10-12 22:16:20] 2025-10-13 02:15:37,941 | INFO     | architecture information:
[2025-10-12 22:16:20] 2025-10-13 02:15:37,941 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:16:20] 2025-10-13 02:15:37,952 | INFO     | cat /etc/os-release:
[2025-10-12 22:16:20] NAME="CentOS Linux"
[2025-10-12 22:16:20] VERSION="7 (Core)"
[2025-10-12 22:16:20] ID="centos"
[2025-10-12 22:16:20] ID_LIKE="rhel fedora"
[2025-10-12 22:16:20] VERSION_ID="7"
[2025-10-12 22:16:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:16:20] ANSI_COLOR="0;31"
[2025-10-12 22:16:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:16:20] HOME_URL="https://www.centos.org/"
[2025-10-12 22:16:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:16:20] 
[2025-10-12 22:16:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:16:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:16:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:16:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:16:20] 
[2025-10-12 22:16:20] 2025-10-13 02:15:37,952 | INFO     | ***************************************
[2025-10-12 22:16:20] 2025-10-13 02:15:38,455 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 22:16:20] 2025-10-13 02:15:38,466 | INFO     | sufficient remaining disk space (83757105152 B)
[2025-10-12 22:16:20] 2025-10-13 02:15:38,466 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:16:20] 2025-10-13 02:15:38,466 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:16:20] 2025-10-13 02:15:38,466 | INFO     | update_server=False
[2025-10-12 22:16:20] 2025-10-13 02:15:38,466 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:16:20] 2025-10-13 02:15:38,466 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:16:20] 2025-10-13 02:15:38,827 | INFO     | all data control threads have been joined
[2025-10-12 22:16:20] 2025-10-13 02:15:39,066 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:16:20] 2025-10-13 02:15:39,067 | INFO     | aborting loop
[2025-10-12 22:16:20] 2025-10-13 02:15:39,112 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:16:20] 2025-10-13 02:15:39,471 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:16:20] 2025-10-13 02:15:39,472 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:16:20] 2025-10-13 02:15:39,536 | INFO     | all payload control threads have been joined
[2025-10-12 22:16:20] 2025-10-13 02:15:39,664 | INFO     | [job] validate thread has finished
[2025-10-12 22:16:20] 2025-10-13 02:15:39,832 | INFO     | [data] control thread has finished
[2025-10-12 22:16:20] 2025-10-13 02:15:39,902 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:16:20] 2025-10-13 02:15:39,924 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:16:20] 2025-10-13 02:15:40,044 | INFO     | all job control threads have been joined
[2025-10-12 22:16:20] 2025-10-13 02:15:40,072 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:16:20] 2025-10-13 02:15:40,081 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:16:20] 2025-10-13 02:15:40,088 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:16:20] 2025-10-13 02:15:40,541 | INFO     | [payload] control thread has finished
[2025-10-12 22:16:20] 2025-10-13 02:15:40,653 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:16:20] 2025-10-13 02:15:40,959 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:16:20] 2025-10-13 02:15:41,050 | INFO     | [job] control thread has finished
[2025-10-12 22:16:20] 2025-10-13 02:15:41,117 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:16:20] 2025-10-13 02:15:41,207 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:16:20] 2025-10-13 02:15:45,212 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:16:20] 2025-10-13 02:15:48,750 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:16:20] 2025-10-13 02:15:49,755 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:16:20] 2025-10-13 02:16:08,823 | INFO     | PID=625867 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 22:16:20] 2025-10-13 02:16:08,823 | INFO     | .. there are 5 such processes running
[2025-10-12 22:16:20] 2025-10-13 02:16:08,824 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:16:20] 2025-10-13 02:16:08,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:16:20] 2025-10-13 02:16:08,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:16:20] 2025-10-13 02:16:14,600 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:16:20] 2025-10-13 02:16:15,205 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140470451033920)>', '<ExcThread(monitor, started 140469975635712)>']
[2025-10-12 22:16:20] 2025-10-13 02:16:15,859 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:16:20] 2025-10-13 02:16:15,860 | INFO     | [monitor] control thread has ended
[2025-10-12 22:16:20] 2025-10-13 02:16:20,230 | INFO     | all workflow threads have been joined
[2025-10-12 22:16:20] 2025-10-13 02:16:20,230 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:16:20] 2025-10-13 02:16:20,230 | INFO     | traces error code: 0
[2025-10-12 22:16:20] 2025-10-13 02:16:20,231 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:16:20] 2025-10-13 02:16:20,312 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:16:20] 2025-10-13 02:16:20,314 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:16:20] 2025-10-13 02:16:20,316 [wrapper] pilotpid: 625867
[2025-10-12 22:16:20] 2025-10-13 02:16:20,318 [wrapper] Pilot exit status: 0
[2025-10-12 22:16:20] 2025-10-13 02:16:20,326 [wrapper] pandaids: 6840749214
[2025-10-12 22:16:20] 2025-10-13 02:16:20,377 [wrapper] cleanup supervisor_pilot  680715 625868
[2025-10-12 22:16:20] 2025-10-13 02:16:20,380 [wrapper] Test setup, not cleaning
[2025-10-12 22:16:20] 2025-10-13 02:16:20,382 [wrapper] apfmon messages muted
[2025-10-12 22:16:20] 2025-10-13 02:16:20,384 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:16:20] 2025-10-13 02:16:20,386 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:16:20]  *** Error codes and diagnostics ***
[2025-10-12 22:16:20]     "exeErrorCode": 0,
[2025-10-12 22:16:20]     "exeErrorDiag": "",
[2025-10-12 22:16:20]     "pilotErrorCode": 0,
[2025-10-12 22:16:20]     "pilotErrorDiag": "",
[2025-10-12 22:16:20]  *** Listing of results directory ***
[2025-10-12 22:16:20] total 413060
[2025-10-12 22:16:20] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 16:23 pilot3.tar.gz
[2025-10-12 22:16:20] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:31 queuedata.json
[2025-10-12 22:16:20] -rwx------. 1 boincer umatlas     36292 Oct 12 16:32 runpilot2-wrapper.sh
[2025-10-12 22:16:20] -rw-r--r--. 1 boincer umatlas       100 Oct 12 21:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:16:20] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 21:40 run_atlas
[2025-10-12 22:16:20] -rw-r--r--. 1 boincer umatlas       105 Oct 12 21:40 job.xml
[2025-10-12 22:16:20] -rw-r--r--. 2 boincer umatlas 220459629 Oct 12 21:40 EVNT.46676267._004502.pool.root.1
[2025-10-12 22:16:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 21:40 start_atlas.sh
[2025-10-12 22:16:20] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 21:40 shared
[2025-10-12 22:16:20] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 21:40 input.tar.gz
[2025-10-12 22:16:20] -rw-r--r--. 1 boincer umatlas         0 Oct 12 21:40 boinc_lockfile
[2025-10-12 22:16:20] -rw-r--r--. 1 boincer umatlas      2548 Oct 12 21:40 pandaJob.out
[2025-10-12 22:16:20] -rw-------. 1 boincer umatlas    975595 Oct 12 21:40 agis_schedconf.cvmfs.json
[2025-10-12 22:16:20] -rw-------. 1 boincer umatlas   1560580 Oct 12 21:40 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:16:20] drwx------. 5 boincer umatlas      4096 Oct 12 21:40 pilot3
[2025-10-12 22:16:20] -rw-r--r--. 1 boincer umatlas      6900 Oct 12 22:12 init_data.xml
[2025-10-12 22:16:20] -rw-------. 1 boincer umatlas 197270970 Oct 12 22:15 HITS.46676269._088735.pool.root.1
[2025-10-12 22:16:20] -rw-r--r--. 1 boincer umatlas       530 Oct 12 22:15 boinc_task_state.xml
[2025-10-12 22:16:20] -rw-------. 1 boincer umatlas      1022 Oct 12 22:15 memory_monitor_summary.json
[2025-10-12 22:16:20] -rw-------. 1 boincer umatlas    321963 Oct 12 22:15 log.46676269._088735.job.log.tgz.1
[2025-10-12 22:16:20] -rw-------. 1 boincer umatlas      7769 Oct 12 22:15 heartbeat.json
[2025-10-12 22:16:20] -rw-------. 1 boincer umatlas        95 Oct 12 22:16 pilot_heartbeat.json
[2025-10-12 22:16:20] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 22:16 boinc_mmap_file
[2025-10-12 22:16:20] -rw-r--r--. 1 boincer umatlas        27 Oct 12 22:16 wrapper_checkpoint.txt
[2025-10-12 22:16:20] -rw-------. 1 boincer umatlas      4894 Oct 12 22:16 pilotlog.txt
[2025-10-12 22:16:20] -rw-------. 1 boincer umatlas    345984 Oct 12 22:16 log.46676269._088735.job.log.1
[2025-10-12 22:16:20] -rw-------. 1 boincer umatlas       357 Oct 12 22:16 output.list
[2025-10-12 22:16:20] -rw-r--r--. 1 boincer umatlas       620 Oct 12 22:16 runtime_log
[2025-10-12 22:16:20] -rw-------. 1 boincer umatlas    686080 Oct 12 22:16 result.tar.gz
[2025-10-12 22:16:20] -rw-r--r--. 1 boincer umatlas      8705 Oct 12 22:16 runtime_log.err
[2025-10-12 22:16:20] -rw-------. 1 boincer umatlas       650 Oct 12 22:16 DgQODmtuHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmlxUMDmyi5VLm.diag
[2025-10-12 22:16:20] -rw-r--r--. 1 boincer umatlas     22175 Oct 12 22:16 stderr.txt
[2025-10-12 22:16:20] HITS file was successfully produced:
[2025-10-12 22:16:20] -rw-------. 1 boincer umatlas 197270970 Oct 12 22:15 shared/HITS.pool.root.1
[2025-10-12 22:16:20]  *** Contents of shared directory: ***
[2025-10-12 22:16:20] total 409200
[2025-10-12 22:16:20] -rw-r--r--. 2 boincer umatlas 220459629 Oct 12 21:40 ATLAS.root_0
[2025-10-12 22:16:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 21:40 start_atlas.sh
[2025-10-12 22:16:20] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 21:40 input.tar.gz
[2025-10-12 22:16:20] -rw-------. 1 boincer umatlas 197270970 Oct 12 22:15 HITS.pool.root.1
[2025-10-12 22:16:20] -rw-------. 1 boincer umatlas    686080 Oct 12 22:16 result.tar.gz
22:16:21 (621404): run_atlas exited; CPU time 20793.982663
22:16:21 (621404): called boinc_finish(0)

</stderr_txt>
]]>

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