Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:46:39 (4044): wrapper (7.7.26015): starting
02:46:39 (4044): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 02:46:39] Arguments: --nthreads 4
[2025-10-13 02:46:39] Threads: 4
[2025-10-13 02:46:39] Checking for CVMFS
[2025-10-13 02:46:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:46:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:46:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:46:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:46:49] 2.11.5.0 4252 0 25328 151643 3 1 2381719 4096001 0 130560 0 0 0.000 1291 447 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2025-10-13 02:46:49] CVMFS is ok
[2025-10-13 02:46:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:46:49] Checking for apptainer binary...
[2025-10-13 02:46:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:46:49] Running /usr/bin/apptainer --version
[2025-10-13 02:46:50] apptainer version 1.0.3
[2025-10-13 02:46:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:46:51] TeeC28
[2025-10-13 02:46:51] apptainer works
[2025-10-13 02:46:51] Set ATHENA_PROC_NUMBER=4
[2025-10-13 02:46:51] Set ATHENA_CORE_NUMBER=4
[2025-10-13 02:46:51] Starting ATLAS job with PandaID=6840428487
[2025-10-13 02:46:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/users/jmp/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:30:58]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:30:58] 2025-10-13 04:30:27,200 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:30:58] 2025-10-13 04:30:27,200 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:30:58] 2025-10-13 04:30:27,203 | INFO     | sufficient remaining disk space (414641553408 B)
[2025-10-13 05:30:58] 2025-10-13 04:30:27,204 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:30:58] 2025-10-13 04:30:27,204 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-13 05:30:58] 2025-10-13 04:30:27,204 | INFO     | sum of square deviations: 1270051720.0
[2025-10-13 05:30:58] 2025-10-13 04:30:27,206 | INFO     | sum of deviations: -4563084382.0
[2025-10-13 05:30:58] 2025-10-13 04:30:27,206 | INFO     | mean x: 1760324908.5
[2025-10-13 05:30:58] 2025-10-13 04:30:27,206 | INFO     | mean y: 2366417.9375
[2025-10-13 05:30:58] 2025-10-13 04:30:27,206 | INFO     | -- intersect: 6326920741.773957
[2025-10-13 05:30:58] 2025-10-13 04:30:27,206 | INFO     | intersect: 6326920741.773957
[2025-10-13 05:30:58] 2025-10-13 04:30:27,207 | INFO     | chi2: 1.6098625396292705
[2025-10-13 05:30:58] 2025-10-13 04:30:27,207 | INFO     | sum of square deviations: 1154663510.0
[2025-10-13 05:30:58] 2025-10-13 04:30:27,209 | INFO     | sum of deviations: -4411535311.0
[2025-10-13 05:30:58] 2025-10-13 04:30:27,209 | INFO     | mean x: 1760324756.0
[2025-10-13 05:30:58] 2025-10-13 04:30:27,209 | INFO     | mean y: 2366618.2967741936
[2025-10-13 05:30:58] 2025-10-13 04:30:27,209 | INFO     | -- intersect: 6727905922.748734
[2025-10-13 05:30:58] 2025-10-13 04:30:27,209 | INFO     | intersect: 6727905922.748734
[2025-10-13 05:30:58] 2025-10-13 04:30:27,209 | INFO     | chi2: 1.6088236531734263
[2025-10-13 05:30:58] 2025-10-13 04:30:27,209 | INFO     | current chi2=1.6088236531734263 (change=0.06453261879634756 %)
[2025-10-13 05:30:58] 2025-10-13 04:30:27,210 | INFO     | right removable region: 154
[2025-10-13 05:30:58] 2025-10-13 04:30:27,210 | INFO     | sum of square deviations: 1154663510.0
[2025-10-13 05:30:58] 2025-10-13 04:30:27,211 | INFO     | sum of deviations: -22489616335.0
[2025-10-13 05:30:58] 2025-10-13 04:30:27,211 | INFO     | mean x: 1760325061.0
[2025-10-13 05:30:58] 2025-10-13 04:30:27,211 | INFO     | mean y: 2389616.6516129035
[2025-10-13 05:30:58] 2025-10-13 04:30:27,212 | INFO     | -- intersect: 34288599325.292595
[2025-10-13 05:30:58] 2025-10-13 04:30:27,212 | INFO     | intersect: 34288599325.292595
[2025-10-13 05:30:58] 2025-10-13 04:30:27,212 | INFO     | chi2: 0.27286766057140566
[2025-10-13 05:30:58] 2025-10-13 04:30:27,212 | INFO     | current chi2=0.27286766057140566 (change=83.05025094662783 %)
[2025-10-13 05:30:58] 2025-10-13 04:30:27,212 | INFO     | sum of square deviations: 1046484737.5
[2025-10-13 05:30:58] 2025-10-13 04:30:27,214 | INFO     | sum of deviations: -14283014244.500002
[2025-10-13 05:30:58] 2025-10-13 04:30:27,214 | INFO     | mean x: 1760325213.5
[2025-10-13 05:30:58] 2025-10-13 04:30:27,214 | INFO     | mean y: 2378035.566666667
[2025-10-13 05:30:58] 2025-10-13 04:30:27,214 | INFO     | -- intersect: 24028289927.447464
[2025-10-13 05:30:58] 2025-10-13 04:30:27,214 | INFO     | intersect: 24028289927.447464
[2025-10-13 05:30:58] 2025-10-13 04:30:27,214 | INFO     | chi2: 0.2142998606146796
[2025-10-13 05:30:58] 2025-10-13 04:30:27,215 | INFO     | current chi2=0.2142998606146796 (change=21.463811370713785 %)
[2025-10-13 05:30:58] 2025-10-13 04:30:27,215 | INFO     | left removable region: 20
[2025-10-13 05:30:58] 2025-10-13 04:30:27,215 | INFO     | sum of square deviations: 746051197.5
[2025-10-13 05:30:58] 2025-10-13 04:30:27,216 | INFO     | sum of deviations: 1349768349.9999998
[2025-10-13 05:30:58] 2025-10-13 04:30:27,216 | INFO     | mean x: 1760325335.5
[2025-10-13 05:30:58] 2025-10-13 04:30:27,216 | INFO     | mean y: 2353250.686567164
[2025-10-13 05:30:58] 2025-10-13 04:30:27,216 | INFO     | -- intersect: -3182456895.7525196
[2025-10-13 05:30:58] 2025-10-13 04:30:27,217 | INFO     | intersect: -3182456895.7525196
[2025-10-13 05:30:58] 2025-10-13 04:30:27,217 | INFO     | chi2: 0.0007866325003868437
[2025-10-13 05:30:58] 2025-10-13 04:30:27,217 | INFO     | -- intersect: -3182456895.7525196
[2025-10-13 05:30:58] 2025-10-13 04:30:27,217 | INFO     | current memory leak: 1.81 B/s (using 134 data points, chi2=0.00)
[2025-10-13 05:30:58] 2025-10-13 04:30:27,217 | INFO     | size of work directory /home/m/users/jmp/BOINC/slots/0/PanDA_Pilot-6840428487: 2371778 B (within 2537553920 B limit)
[2025-10-13 05:30:58] 2025-10-13 04:30:27,218 | INFO     | could have reported an average CPU frequency of 3200 MHz (9 samples)
[2025-10-13 05:30:58] 2025-10-13 04:30:27,218 | INFO     | ..............................
[2025-10-13 05:30:58] 2025-10-13 04:30:27,218 | INFO     | pfn file=/home/m/users/jmp/BOINC/slots/0/PanDA_Pilot-6840428487/HITS.46676269._084089.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 05:30:58] 2025-10-13 04:30:27,218 | INFO     | . Timing measurements:
[2025-10-13 05:30:58] 2025-10-13 04:30:27,218 | INFO     | total size of present files: 0 B (workdir size: 2371778 B)
[2025-10-13 05:30:58] 2025-10-13 04:30:27,218 | INFO     | . get job = 0 s
[2025-10-13 05:30:58] 2025-10-13 04:30:27,218 | INFO     | output file size check: skipping output file /home/m/users/jmp/BOINC/slots/0/PanDA_Pilot-6840428487/HITS.46676269._084089.pool.root.1 since it does not exist
[2025-10-13 05:30:58] 2025-10-13 04:30:27,218 | INFO     | . initial setup = 6 s
[2025-10-13 05:30:58] 2025-10-13 04:30:27,219 | INFO     | . payload setup = 6 s
[2025-10-13 05:30:58] 2025-10-13 04:30:27,219 | INFO     | . stage-in = 0 s
[2025-10-13 05:30:58] 2025-10-13 04:30:27,219 | INFO     | . payload execution = 9739 s
[2025-10-13 05:30:58] 2025-10-13 04:30:27,219 | INFO     | . stage-out = 0 s
[2025-10-13 05:30:58] 2025-10-13 04:30:27,219 | INFO     | . log creation = 0 s
[2025-10-13 05:30:58] 2025-10-13 04:30:27,219 | INFO     | ..............................
[2025-10-13 05:30:58] 2025-10-13 04:30:27,380 | INFO     | 
[2025-10-13 05:30:58] 2025-10-13 04:30:27,380 | INFO     | job summary report
[2025-10-13 05:30:58] 2025-10-13 04:30:27,380 | INFO     | --------------------------------------------------
[2025-10-13 05:30:58] 2025-10-13 04:30:27,381 | INFO     | PanDA job id: 6840428487
[2025-10-13 05:30:58] 2025-10-13 04:30:27,381 | INFO     | task id: 46676269
[2025-10-13 05:30:58] 2025-10-13 04:30:27,381 | INFO     | errors: (none)
[2025-10-13 05:30:58] 2025-10-13 04:30:27,381 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:30:58] 2025-10-13 04:30:27,381 | INFO     | pilot state: finished 
[2025-10-13 05:30:58] 2025-10-13 04:30:27,381 | INFO     | transexitcode: 0
[2025-10-13 05:30:58] 2025-10-13 04:30:27,381 | INFO     | exeerrorcode: 0
[2025-10-13 05:30:58] 2025-10-13 04:30:27,381 | INFO     | exeerrordiag: 
[2025-10-13 05:30:58] 2025-10-13 04:30:27,382 | INFO     | exitcode: 0
[2025-10-13 05:30:58] 2025-10-13 04:30:27,382 | INFO     | exitmsg: OK
[2025-10-13 05:30:58] 2025-10-13 04:30:27,382 | INFO     | cpuconsumptiontime: 37630 s
[2025-10-13 05:30:58] 2025-10-13 04:30:27,382 | INFO     | nevents: 400
[2025-10-13 05:30:58] 2025-10-13 04:30:27,382 | INFO     | neventsw: 0
[2025-10-13 05:30:58] 2025-10-13 04:30:27,382 | INFO     | pid: 14676
[2025-10-13 05:30:58] 2025-10-13 04:30:27,382 | INFO     | pgrp: 14676
[2025-10-13 05:30:58] 2025-10-13 04:30:27,382 | INFO     | corecount: 4
[2025-10-13 05:30:58] 2025-10-13 04:30:27,382 | INFO     | event service: False
[2025-10-13 05:30:58] 2025-10-13 04:30:27,382 | INFO     | sizes: {0: 2348645, 1: 2348844, 3: 2349106, 11: 2349134, 9749: 2377649, 9750: 2386849, 9778: 2387079}
[2025-10-13 05:30:58] 2025-10-13 04:30:27,383 | INFO     | --------------------------------------------------
[2025-10-13 05:30:58] 2025-10-13 04:30:27,383 | INFO     | 
[2025-10-13 05:30:58] 2025-10-13 04:30:27,383 | INFO     | executing command: ls -lF /home/m/users/jmp/BOINC/slots/0
[2025-10-13 05:30:58] 2025-10-13 04:30:27,388 | INFO     | number of running child processes to parent process 14676: 1
[2025-10-13 05:30:58] 2025-10-13 04:30:27,388 | INFO     | maximum number of monitored processes: 6
[2025-10-13 05:30:58] 2025-10-13 04:30:27,388 | INFO     | aborting job monitoring since job object (job id=6840428487) has expired
[2025-10-13 05:30:58] 2025-10-13 04:30:27,391 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:30:58] 2025-10-13 04:30:27,391 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:30:58] 2025-10-13 04:30:27,391 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:30:58] 2025-10-13 04:30:27,391 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:30:58] 2025-10-13 04:30:27,391 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:30:58] 2025-10-13 04:30:27,391 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:30:58] 2025-10-13 04:30:27,391 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:30:58] 2025-10-13 04:30:27,391 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:30:58] 2025-10-13 04:30:27,391 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:30:58] 2025-10-13 04:30:27,392 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:30:58] 2025-10-13 04:30:27,392 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:30:58] 2025-10-13 04:30:27,392 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:30:58] 2025-10-13 04:30:27,392 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:30:58] 2025-10-13 04:30:27,392 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:30:58] 2025-10-13 04:30:27,392 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:30:58] 2025-10-13 04:30:27,392 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:30:58] 2025-10-13 04:30:27,392 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:30:58] 2025-10-13 04:30:27,392 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:30:58] 2025-10-13 04:30:27,392 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:30:58] 2025-10-13 04:30:27,392 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:30:58] 2025-10-13 04:30:27,392 | INFO     | job 6840428487 has completed (purged errors)
[2025-10-13 05:30:58] 2025-10-13 04:30:27,393 | INFO     | overall cleanup function is called
[2025-10-13 05:30:58] 2025-10-13 04:30:28,399 | INFO     | --- collectZombieJob: --- 10, [14676]
[2025-10-13 05:30:58] 2025-10-13 04:30:28,400 | INFO     | zombie collector waiting for pid 14676
[2025-10-13 05:30:58] 2025-10-13 04:30:28,401 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:30:58] 2025-10-13 04:30:28,401 | INFO     | collected zombie processes
[2025-10-13 05:30:58] 2025-10-13 04:30:28,402 | INFO     | will attempt to kill all subprocesses of pid=14676
[2025-10-13 05:30:58] 2025-10-13 04:30:28,474 | INFO     | process IDs to be killed: [14676] (in reverse order)
[2025-10-13 05:30:58] 2025-10-13 04:30:28,497 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:30:58] 2025-10-13 04:30:28,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:30:58] 2025-10-13 04:30:28,499 | INFO     | did not find any defunct processes belonging to 14676
[2025-10-13 05:30:58] 2025-10-13 04:30:28,501 | INFO     | did not find any defunct processes belonging to 14676
[2025-10-13 05:30:58] 2025-10-13 04:30:28,501 | INFO     | ready for new job
[2025-10-13 05:30:58] 2025-10-13 04:30:28,501 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:30:58] 2025-10-13 04:30:28,502 | INFO     | ***************************************
[2025-10-13 05:30:58] 2025-10-13 04:30:28,502 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:30:58] 2025-10-13 04:30:28,502 | INFO     | ***************************************
[2025-10-13 05:30:58] 2025-10-13 04:30:28,502 | INFO     | 
[2025-10-13 05:30:58] 2025-10-13 04:30:28,521 | INFO     | architecture information:
[2025-10-13 05:30:58] 2025-10-13 04:30:28,521 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:30:58] 2025-10-13 04:30:28,528 | INFO     | cat /etc/os-release:
[2025-10-13 05:30:58] NAME="CentOS Linux"
[2025-10-13 05:30:58] VERSION="7 (Core)"
[2025-10-13 05:30:58] ID="centos"
[2025-10-13 05:30:58] ID_LIKE="rhel fedora"
[2025-10-13 05:30:58] VERSION_ID="7"
[2025-10-13 05:30:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:30:58] ANSI_COLOR="0;31"
[2025-10-13 05:30:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:30:58] HOME_URL="https://www.centos.org/"
[2025-10-13 05:30:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:30:58] 
[2025-10-13 05:30:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:30:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:30:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:30:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:30:58] 
[2025-10-13 05:30:58] 2025-10-13 04:30:28,528 | INFO     | ***************************************
[2025-10-13 05:30:58] 2025-10-13 04:30:29,032 | INFO     | executing command: df -mP /home/m/users/jmp/BOINC/slots/0
[2025-10-13 05:30:58] 2025-10-13 04:30:29,044 | INFO     | sufficient remaining disk space (414644699136 B)
[2025-10-13 05:30:58] 2025-10-13 04:30:29,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:30:58] 2025-10-13 04:30:29,045 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:30:58] 2025-10-13 04:30:29,045 | INFO     | update_server=False
[2025-10-13 05:30:58] 2025-10-13 04:30:29,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:30:58] 2025-10-13 04:30:29,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:30:58] 2025-10-13 04:30:29,046 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:30:58] 2025-10-13 04:30:29,046 | INFO     | aborting loop
[2025-10-13 05:30:58] 2025-10-13 04:30:29,400 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:30:58] 2025-10-13 04:30:29,696 | INFO     | all job control threads have been joined
[2025-10-13 05:30:58] 2025-10-13 04:30:29,991 | INFO     | all data control threads have been joined
[2025-10-13 05:30:58] 2025-10-13 04:30:30,050 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:30:58] 2025-10-13 04:30:30,051 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:30:58] 2025-10-13 04:30:30,052 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:30:58] 2025-10-13 04:30:30,297 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:30:58] 2025-10-13 04:30:30,366 | INFO     | all payload control threads have been joined
[2025-10-13 05:30:58] 2025-10-13 04:30:30,621 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:30:58] 2025-10-13 04:30:30,702 | INFO     | [job] control thread has finished
[2025-10-13 05:30:58] 2025-10-13 04:30:30,927 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:30:58] 2025-10-13 04:30:30,997 | INFO     | [data] control thread has finished
[2025-10-13 05:30:58] 2025-10-13 04:30:31,124 | INFO     | [job] validate thread has finished
[2025-10-13 05:30:58] 2025-10-13 04:30:31,237 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:30:58] 2025-10-13 04:30:31,238 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:30:58] 2025-10-13 04:30:31,268 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:30:58] 2025-10-13 04:30:31,372 | INFO     | [payload] control thread has finished
[2025-10-13 05:30:58] 2025-10-13 04:30:31,406 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:30:58] 2025-10-13 04:30:31,528 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:30:58] 2025-10-13 04:30:32,181 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:30:58] 2025-10-13 04:30:36,188 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:30:58] 2025-10-13 04:30:39,813 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:30:58] 2025-10-13 04:30:40,819 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:30:58] 2025-10-13 04:30:40,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140168405632832)>', '<ExcThread(monitor, started 140168094787328)>']
[2025-10-13 05:30:58] 2025-10-13 04:30:45,942 | INFO     | all workflow threads have been joined
[2025-10-13 05:30:58] 2025-10-13 04:30:45,943 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:30:58] 2025-10-13 04:30:45,943 | INFO     | traces error code: 0
[2025-10-13 05:30:58] 2025-10-13 04:30:45,944 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:30:58] 2025-10-13 04:30:58,583 | INFO     | PID=8304 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 05:30:58] 2025-10-13 04:30:58,583 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:30:58] 2025-10-13 04:30:58,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:30:58] 2025-10-13 04:30:58,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:30:58] 2025-10-13 04:30:58,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:30:58] 2025-10-13 04:30:58,584 | INFO     | [monitor] control thread has ended
[2025-10-13 05:30:58] 2025-10-13 04:30:58,680 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:30:58] 2025-10-13 04:30:58,682 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:30:58] 2025-10-13 04:30:58,683 [wrapper] pilotpid: 8304
[2025-10-13 05:30:58] 2025-10-13 04:30:58,685 [wrapper] Pilot exit status: 0
[2025-10-13 05:30:58] 2025-10-13 04:30:58,700 [wrapper] pandaids: 6840428487
[2025-10-13 05:30:58] 2025-10-13 04:30:58,717 [wrapper] cleanup supervisor_pilot 31369 8305
[2025-10-13 05:30:58] 2025-10-13 04:30:58,719 [wrapper] Test setup, not cleaning
[2025-10-13 05:30:58] 2025-10-13 04:30:58,720 [wrapper] apfmon messages muted
[2025-10-13 05:30:58] 2025-10-13 04:30:58,722 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:30:58] 2025-10-13 04:30:58,724 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:30:58]  *** Error codes and diagnostics ***
[2025-10-13 05:30:58]     "exeErrorCode": 0,
[2025-10-13 05:30:58]     "exeErrorDiag": "",
[2025-10-13 05:30:58]     "pilotErrorCode": 0,
[2025-10-13 05:30:58]     "pilotErrorDiag": "",
[2025-10-13 05:30:58]  *** Listing of results directory ***
[2025-10-13 05:30:58] total 413276
[2025-10-13 05:30:58] -rw-r--r-- 1 m m    557409 Oct 12 17:49 pilot3.tar.gz
[2025-10-13 05:30:58] -rw-r--r-- 1 m m      5112 Oct 12 17:50 queuedata.json
[2025-10-13 05:30:58] -rwx------ 1 m m     36292 Oct 12 17:50 runpilot2-wrapper.sh
[2025-10-13 05:30:58] -rw-rw-r-- 1 m m       100 Oct 13 02:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:30:58] -rwxr-xr-x 1 m m      7986 Oct 13 02:46 run_atlas
[2025-10-13 05:30:58] -rw-rw-r-- 1 m m       105 Oct 13 02:46 job.xml
[2025-10-13 05:30:58] -rw-r--r-- 2 m m     15120 Oct 13 02:46 start_atlas.sh
[2025-10-13 05:30:58] drwxrwx--x 2 m m      4096 Oct 13 02:46 shared
[2025-10-13 05:30:58] -rw-r--r-- 2 m m    569687 Oct 13 02:46 input.tar.gz
[2025-10-13 05:30:58] -rw-rw-r-- 1 m m      6041 Oct 13 02:46 init_data.xml
[2025-10-13 05:30:58] -rw-r--r-- 2 m m 223088507 Oct 13 02:46 EVNT.46676267._001821.pool.root.1
[2025-10-13 05:30:58] -rw-rw-r-- 1 m m         0 Oct 13 02:46 boinc_lockfile
[2025-10-13 05:30:58] -rw-rw-r-- 1 m m      2550 Oct 13 02:46 pandaJob.out
[2025-10-13 05:30:58] -rw------- 1 m m    975595 Oct 13 02:47 agis_schedconf.cvmfs.json
[2025-10-13 05:30:58] -rw------- 1 m m   1560580 Oct 13 02:47 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:30:58] drwx------ 5 m m      4096 Oct 13 02:47 pilot3
[2025-10-13 05:30:58] -rw------- 1 m m 192768589 Oct 13 05:29 HITS.46676269._084089.pool.root.1
[2025-10-13 05:30:58] -rw-rw-r-- 1 m m       529 Oct 13 05:29 boinc_task_state.xml
[2025-10-13 05:30:58] -rw------- 1 m m      1028 Oct 13 05:29 memory_monitor_summary.json
[2025-10-13 05:30:58] -rw------- 1 m m    326114 Oct 13 05:29 log.46676269._084089.job.log.tgz.1
[2025-10-13 05:30:58] -rw------- 1 m m        95 Oct 13 05:30 pilot_heartbeat.json
[2025-10-13 05:30:58] -rw------- 1 m m      7781 Oct 13 05:30 heartbeat.json
[2025-10-13 05:30:58] -rw-rw-r-- 1 m m      8192 Oct 13 05:30 boinc_mmap_file
[2025-10-13 05:30:58] -rw-rw-r-- 1 m m        27 Oct 13 05:30 wrapper_checkpoint.txt
[2025-10-13 05:30:58] -rw------- 1 m m       744 Oct 13 05:30 pilotlog.txt
[2025-10-13 05:30:58] -rw------- 1 m m   1396460 Oct 13 05:30 log.46676269._084089.job.log.1
[2025-10-13 05:30:58] -rw------- 1 m m       357 Oct 13 05:30 output.list
[2025-10-13 05:30:58] -rw-rw-r-- 1 m m       620 Oct 13 05:30 runtime_log
[2025-10-13 05:30:58] -rw------- 1 m m   1740800 Oct 13 05:30 result.tar.gz
[2025-10-13 05:30:58] -rw-rw-r-- 1 m m      8757 Oct 13 05:30 runtime_log.err
[2025-10-13 05:30:58] -rw------- 1 m m       643 Oct 13 05:30 BYAMDmHSES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRjkNDmSQ8aMm.diag
[2025-10-13 05:30:58] -rw-rw-r-- 1 m m     21009 Oct 13 05:30 stderr.txt
[2025-10-13 05:30:58] HITS file was successfully produced:
[2025-10-13 05:30:58] -rw------- 1 m m 192768589 Oct 13 05:29 shared/HITS.pool.root.1
[2025-10-13 05:30:58]  *** Contents of shared directory: ***
[2025-10-13 05:30:58] total 408392
[2025-10-13 05:30:58] -rw-r--r-- 2 m m     15120 Oct 13 02:46 start_atlas.sh
[2025-10-13 05:30:58] -rw-r--r-- 2 m m    569687 Oct 13 02:46 input.tar.gz
[2025-10-13 05:30:58] -rw-r--r-- 2 m m 223088507 Oct 13 02:46 ATLAS.root_0
[2025-10-13 05:30:58] -rw------- 1 m m 192768589 Oct 13 05:29 HITS.pool.root.1
[2025-10-13 05:30:58] -rw------- 1 m m   1740800 Oct 13 05:30 result.tar.gz
05:31:00 (4044): run_atlas exited; CPU time 37728.981049
05:31:00 (4044): called boinc_finish(0)

</stderr_txt>
]]>

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