Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:49:01 (3938025): wrapper (7.7.26015): starting
20:49:01 (3938025): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:49:01] Arguments: --nthreads 8
[2025-10-12 20:49:01] Threads: 8
[2025-10-12 20:49:01] Checking for CVMFS
[2025-10-12 20:49:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:49:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:49:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:49:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:49:03] 2.13.2.0 2498914 129984 477164 151642 1 608 16743422 32935936 26692 16776704 0 242298764 99.610 242689057 20740 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 20:49:03] CVMFS is ok
[2025-10-12 20:49:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:49:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:49:03] Further information can be found at the LHC@home message board.
[2025-10-12 20:49:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:49:03] Checking for apptainer binary...
[2025-10-12 20:49:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:49:03] Running /usr/bin/apptainer --version
[2025-10-12 20:49:03] apptainer version 1.4.3-1.el9
[2025-10-12 20:49:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:49:04] c6-2-11-3.aglt2.org
[2025-10-12 20:49:04] apptainer works
[2025-10-12 20:49:04] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:49:04] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:49:04] Starting ATLAS job with PandaID=6840854379
[2025-10-12 20:49:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:00:06]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:00:06] 2025-10-13 04:58:29,120 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:00:06] 2025-10-13 04:58:29,120 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:00:06] 2025-10-13 04:58:29,219 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:00:06] 2025-10-13 04:58:29,220 | INFO     | sum of square deviations: 4340499170.373456
[2025-10-13 01:00:06] 2025-10-13 04:58:29,320 | INFO     | sum of deviations: 118276281110.6182
[2025-10-13 01:00:06] 2025-10-13 04:58:29,321 | INFO     | mean x: 1760324086.7219918
[2025-10-13 01:00:06] 2025-10-13 04:58:29,321 | INFO     | mean y: 2061984.1286307054
[2025-10-13 01:00:06] 2025-10-13 04:58:29,321 | INFO     | -- intersect: -47965827964.57712
[2025-10-13 01:00:06] 2025-10-13 04:58:29,321 | INFO     | intersect: -47965827964.57712
[2025-10-13 01:00:06] 2025-10-13 04:58:29,321 | INFO     | chi2: 7.202361615126399
[2025-10-13 01:00:06] 2025-10-13 04:58:29,322 | INFO     | sum of square deviations: 4075912578.542379
[2025-10-13 01:00:06] 2025-10-13 04:58:29,398 | INFO     | sum of deviations: 156454429644.98306
[2025-10-13 01:00:06] 2025-10-13 04:58:29,399 | INFO     | mean x: 1760323934.220339
[2025-10-13 01:00:06] 2025-10-13 04:58:29,399 | INFO     | mean y: 2083798.9618644067
[2025-10-13 01:00:06] 2025-10-13 04:58:29,399 | INFO     | -- intersect: -67568177292.68983
[2025-10-13 01:00:06] 2025-10-13 04:58:29,399 | INFO     | intersect: -67568177292.68983
[2025-10-13 01:00:06] 2025-10-13 04:58:29,400 | INFO     | chi2: 4.830904410588553
[2025-10-13 01:00:06] 2025-10-13 04:58:29,400 | INFO     | current chi2=4.830904410588553 (change=32.92610578670907 %)
[2025-10-13 01:00:06] 2025-10-13 04:58:29,400 | INFO     | sum of square deviations: 3822272803.5670786
[2025-10-13 01:00:06] 2025-10-13 04:58:29,455 | INFO     | sum of deviations: 152756395766.9221
[2025-10-13 01:00:06] 2025-10-13 04:58:29,455 | INFO     | mean x: 1760323781.7099566
[2025-10-13 01:00:06] 2025-10-13 04:58:29,455 | INFO     | mean y: 2081574.2077922078
[2025-10-13 01:00:06] 2025-10-13 04:58:29,455 | INFO     | -- intersect: -70348919020.4812
[2025-10-13 01:00:06] 2025-10-13 04:58:29,455 | INFO     | intersect: -70348919020.4812
[2025-10-13 01:00:06] 2025-10-13 04:58:29,456 | INFO     | chi2: 4.815146526920422
[2025-10-13 01:00:06] 2025-10-13 04:58:29,456 | INFO     | current chi2=4.815146526920422 (change=0.32618910102199006 %)
[2025-10-13 01:00:06] 2025-10-13 04:58:29,456 | INFO     | right removable region: 230
[2025-10-13 01:00:06] 2025-10-13 04:58:29,491 | INFO     | sum of square deviations: 4075864392.7118683
[2025-10-13 01:00:06] 2025-10-13 04:58:29,493 | INFO     | sum of deviations: 60186919224.00003
[2025-10-13 01:00:06] 2025-10-13 04:58:29,493 | INFO     | mean x: 1760324239.2372882
[2025-10-13 01:00:06] 2025-10-13 04:58:29,494 | INFO     | mean y: 2095390.25
[2025-10-13 01:00:06] 2025-10-13 04:58:29,494 | INFO     | -- intersect: -25992020847.884056
[2025-10-13 01:00:06] 2025-10-13 04:58:29,494 | INFO     | intersect: -25992020847.884056
[2025-10-13 01:00:06] 2025-10-13 04:58:29,494 | INFO     | chi2: 4.1227560649441095
[2025-10-13 01:00:06] 2025-10-13 04:58:29,495 | INFO     | current chi2=4.1227560649441095 (change=42.75827450421959 %)
[2025-10-13 01:00:06] 2025-10-13 04:58:29,525 | INFO     | sum of square deviations: 3822249388.415574
[2025-10-13 01:00:06] 2025-10-13 04:58:29,527 | INFO     | sum of deviations: 29056786796.935112
[2025-10-13 01:00:06] 2025-10-13 04:58:29,527 | INFO     | mean x: 1760324391.7402596
[2025-10-13 01:00:06] 2025-10-13 04:58:29,527 | INFO     | mean y: 2114077.4155844157
[2025-10-13 01:00:06] 2025-10-13 04:58:29,527 | INFO     | -- intersect: -13379893569.511925
[2025-10-13 01:00:06] 2025-10-13 04:58:29,528 | INFO     | intersect: -13379893569.511925
[2025-10-13 01:00:06] 2025-10-13 04:58:29,556 | INFO     | chi2: 3.341781451656161
[2025-10-13 01:00:06] 2025-10-13 04:58:29,557 | INFO     | current chi2=3.341781451656161 (change=18.94302260394676 %)
[2025-10-13 01:00:06] 2025-10-13 04:58:29,557 | INFO     | left removable region: 20
[2025-10-13 01:00:06] 2025-10-13 04:58:29,557 | INFO     | sum of square deviations: 2871711347.923795
[2025-10-13 01:00:06] 2025-10-13 04:58:29,592 | INFO     | sum of deviations: 22799456841.761894
[2025-10-13 01:00:06] 2025-10-13 04:58:29,593 | INFO     | mean x: 1760324361.2190475
[2025-10-13 01:00:06] 2025-10-13 04:58:29,593 | INFO     | mean y: 2166708.8095238097
[2025-10-13 01:00:06] 2025-10-13 04:58:29,593 | INFO     | -- intersect: -13973624879.760948
[2025-10-13 01:00:06] 2025-10-13 04:58:29,593 | INFO     | intersect: -13973624879.760948
[2025-10-13 01:00:06] 2025-10-13 04:58:29,593 | INFO     | chi2: 0.13003441168046528
[2025-10-13 01:00:06] 2025-10-13 04:58:29,594 | INFO     | -- intersect: -13973624879.760948
[2025-10-13 01:00:06] 2025-10-13 04:58:29,594 | INFO     | current memory leak: 7.94 B/s (using 210 data points, chi2=0.13)
[2025-10-13 01:00:06] 2025-10-13 04:58:29,595 | INFO     | could have reported an average CPU frequency of 2582 MHz (12 samples)
[2025-10-13 01:00:06] 2025-10-13 04:58:29,595 | INFO     | ..............................
[2025-10-13 01:00:06] 2025-10-13 04:58:29,595 | INFO     | . Timing measurements:
[2025-10-13 01:00:06] 2025-10-13 04:58:29,595 | INFO     | . get job = 0 s
[2025-10-13 01:00:06] 2025-10-13 04:58:29,596 | INFO     | . initial setup = 5 s
[2025-10-13 01:00:06] 2025-10-13 04:58:29,596 | INFO     | . payload setup = 49 s
[2025-10-13 01:00:06] 2025-10-13 04:58:29,625 | INFO     | . stage-in = 0 s
[2025-10-13 01:00:06] 2025-10-13 04:58:29,625 | INFO     | . payload execution = 14724 s
[2025-10-13 01:00:06] 2025-10-13 04:58:29,625 | INFO     | . stage-out = 10 s
[2025-10-13 01:00:06] 2025-10-13 04:58:29,625 | INFO     | . log creation = 0 s
[2025-10-13 01:00:06] 2025-10-13 04:58:29,625 | INFO     | ..............................
[2025-10-13 01:00:06] 2025-10-13 04:58:31,144 | INFO     | time since job start (14901s) is within the limit (172800.0s)
[2025-10-13 01:00:06] 2025-10-13 04:58:31,752 | INFO     | 
[2025-10-13 01:00:06] 2025-10-13 04:58:31,752 | INFO     | job summary report
[2025-10-13 01:00:06] 2025-10-13 04:58:31,752 | INFO     | --------------------------------------------------
[2025-10-13 01:00:06] 2025-10-13 04:58:31,753 | INFO     | PanDA job id: 6840854379
[2025-10-13 01:00:06] 2025-10-13 04:58:31,814 | INFO     | task id: 46676269
[2025-10-13 01:00:06] 2025-10-13 04:58:31,815 | INFO     | errors: (none)
[2025-10-13 01:00:06] 2025-10-13 04:58:31,815 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:00:06] 2025-10-13 04:58:31,815 | INFO     | pilot state: finished 
[2025-10-13 01:00:06] 2025-10-13 04:58:31,815 | INFO     | transexitcode: 0
[2025-10-13 01:00:06] 2025-10-13 04:58:31,815 | INFO     | exeerrorcode: 0
[2025-10-13 01:00:06] 2025-10-13 04:58:31,815 | INFO     | exeerrordiag: 
[2025-10-13 01:00:06] 2025-10-13 04:58:31,815 | INFO     | exitcode: 0
[2025-10-13 01:00:06] 2025-10-13 04:58:31,815 | INFO     | exitmsg: OK
[2025-10-13 01:00:06] 2025-10-13 04:58:31,816 | INFO     | cpuconsumptiontime: 47046 s
[2025-10-13 01:00:06] 2025-10-13 04:58:31,816 | INFO     | nevents: 400
[2025-10-13 01:00:06] 2025-10-13 04:58:31,816 | INFO     | neventsw: 0
[2025-10-13 01:00:06] 2025-10-13 04:58:31,816 | INFO     | pid: 3957136
[2025-10-13 01:00:06] 2025-10-13 04:58:31,816 | INFO     | pgrp: 3957136
[2025-10-13 01:00:06] 2025-10-13 04:58:31,816 | INFO     | corecount: 8
[2025-10-13 01:00:06] 2025-10-13 04:58:31,816 | INFO     | event service: False
[2025-10-13 01:00:06] 2025-10-13 04:58:31,816 | INFO     | sizes: {0: 2348685, 1: 2348884, 2: 2348912, 13: 2348912, 25: 2348968, 35: 2349258, 37: 2349414, 14779: 2380064, 14780: 2380063, 14791: 2389117, 14793: 2389173, 148
[2025-10-13 01:00:06] 2025-10-13 04:58:31,816 | INFO     | --------------------------------------------------
[2025-10-13 01:00:06] 2025-10-13 04:58:31,816 | INFO     | 
[2025-10-13 01:00:06] 2025-10-13 04:58:31,817 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 01:00:06] 2025-10-13 04:58:32,180 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:00:06] 2025-10-13 04:58:32,181 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:00:06] 2025-10-13 04:58:32,181 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:00:06] 2025-10-13 04:58:32,181 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:00:06] 2025-10-13 04:58:32,181 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:00:06] 2025-10-13 04:58:32,181 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:00:06] 2025-10-13 04:58:32,181 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:00:06] 2025-10-13 04:58:32,181 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:00:06] 2025-10-13 04:58:32,182 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:00:06] 2025-10-13 04:58:32,182 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:00:06] 2025-10-13 04:58:32,182 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:00:06] 2025-10-13 04:58:32,182 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:00:06] 2025-10-13 04:58:32,182 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:00:06] 2025-10-13 04:58:32,182 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:00:06] 2025-10-13 04:58:32,182 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:00:06] 2025-10-13 04:58:32,182 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:00:06] 2025-10-13 04:58:32,182 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:00:06] 2025-10-13 04:58:32,182 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:00:06] 2025-10-13 04:58:32,183 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:00:06] 2025-10-13 04:58:32,183 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:00:06] 2025-10-13 04:58:32,183 | INFO     | job 6840854379 has completed (purged errors)
[2025-10-13 01:00:06] 2025-10-13 04:58:32,183 | INFO     | overall cleanup function is called
[2025-10-13 01:00:06] 2025-10-13 04:58:33,227 | INFO     | --- collectZombieJob: --- 10, [3957136]
[2025-10-13 01:00:06] 2025-10-13 04:58:33,227 | INFO     | zombie collector waiting for pid 3957136
[2025-10-13 01:00:06] 2025-10-13 04:58:33,227 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:00:06] 2025-10-13 04:58:33,227 | INFO     | collected zombie processes
[2025-10-13 01:00:06] 2025-10-13 04:58:33,227 | INFO     | will attempt to kill all subprocesses of pid=3957136
[2025-10-13 01:00:06] 2025-10-13 04:58:36,591 | INFO     | process IDs to be killed: [3957136] (in reverse order)
[2025-10-13 01:00:06] 2025-10-13 04:58:37,795 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:00:06] 2025-10-13 04:58:37,795 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:00:06] 2025-10-13 04:58:37,822 | INFO     | did not find any defunct processes belonging to 3957136
[2025-10-13 01:00:06] 2025-10-13 04:58:37,884 | INFO     | did not find any defunct processes belonging to 3957136
[2025-10-13 01:00:06] 2025-10-13 04:58:37,884 | INFO     | ready for new job
[2025-10-13 01:00:06] 2025-10-13 04:58:37,885 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:00:06] 2025-10-13 04:58:37,887 | INFO     | ***************************************
[2025-10-13 01:00:06] 2025-10-13 04:58:37,888 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:00:06] 2025-10-13 04:58:37,908 | INFO     | ***************************************
[2025-10-13 01:00:06] 2025-10-13 04:58:37,908 | INFO     | 
[2025-10-13 01:00:06] 2025-10-13 04:58:37,948 | INFO     | architecture information:
[2025-10-13 01:00:06] 2025-10-13 04:58:37,982 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:00:06] 2025-10-13 04:58:38,102 | INFO     | cat /etc/os-release:
[2025-10-13 01:00:06] NAME="CentOS Linux"
[2025-10-13 01:00:06] VERSION="7 (Core)"
[2025-10-13 01:00:06] ID="centos"
[2025-10-13 01:00:06] ID_LIKE="rhel fedora"
[2025-10-13 01:00:06] VERSION_ID="7"
[2025-10-13 01:00:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:00:06] ANSI_COLOR="0;31"
[2025-10-13 01:00:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:00:06] HOME_URL="https://www.centos.org/"
[2025-10-13 01:00:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:00:06] 
[2025-10-13 01:00:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:00:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:00:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:00:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:00:06] 
[2025-10-13 01:00:06] 2025-10-13 04:58:38,103 | INFO     | ***************************************
[2025-10-13 01:00:06] 2025-10-13 04:58:38,606 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 01:00:06] 2025-10-13 04:58:38,709 | INFO     | sufficient remaining disk space (73472671744 B)
[2025-10-13 01:00:06] 2025-10-13 04:58:38,709 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:00:06] 2025-10-13 04:58:38,709 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:00:06] 2025-10-13 04:58:38,709 | INFO     | update_server=False
[2025-10-13 01:00:06] 2025-10-13 04:58:38,709 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:00:06] 2025-10-13 04:58:38,762 | INFO     | all payload control threads have been joined
[2025-10-13 01:00:06] 2025-10-13 04:58:38,816 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:00:06] 2025-10-13 04:58:38,816 | INFO     | aborting loop
[2025-10-13 01:00:06] 2025-10-13 04:58:39,268 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:00:06] 2025-10-13 04:58:39,474 | INFO     | all data control threads have been joined
[2025-10-13 01:00:06] 2025-10-13 04:58:39,575 | INFO     | all job control threads have been joined
[2025-10-13 01:00:06] 2025-10-13 04:58:39,715 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:00:06] 2025-10-13 04:58:39,768 | INFO     | [payload] control thread has finished
[2025-10-13 01:00:06] 2025-10-13 04:58:39,769 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:00:06] 2025-10-13 04:58:39,806 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:00:06] 2025-10-13 04:58:39,815 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:00:06] 2025-10-13 04:58:39,822 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:00:06] 2025-10-13 04:58:39,942 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:00:06] 2025-10-13 04:58:39,969 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:00:06] 2025-10-13 04:58:39,976 | INFO     | [job] validate thread has finished
[2025-10-13 01:00:06] 2025-10-13 04:58:39,977 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:00:06] 2025-10-13 04:58:39,984 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:00:06] 2025-10-13 04:58:40,480 | INFO     | [data] control thread has finished
[2025-10-13 01:00:06] 2025-10-13 04:58:40,539 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:00:06] 2025-10-13 04:58:40,581 | INFO     | [job] control thread has finished
[2025-10-13 01:00:06] 2025-10-13 04:58:41,035 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:00:06] 2025-10-13 04:58:41,544 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:00:06] 2025-10-13 04:58:41,782 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:00:06] 2025-10-13 04:58:43,336 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:00:06] 2025-10-13 04:59:05,919 | INFO     | PID=3945173 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:00:06] 2025-10-13 04:59:05,920 | INFO     | .. there are 30 such processes running
[2025-10-13 01:00:06] 2025-10-13 04:59:05,921 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:00:06] 2025-10-13 04:59:05,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:00:06] 2025-10-13 04:59:05,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:00:06] 2025-10-13 04:59:37,662 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:00:06] 2025-10-13 04:59:39,074 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140310465451840)>', '<ExcThread(monitor, started 140309979711232)>']
[2025-10-13 01:00:06] 2025-10-13 04:59:39,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:00:06] 2025-10-13 04:59:39,227 | INFO     | [monitor] control thread has ended
[2025-10-13 01:00:06] 2025-10-13 04:59:44,100 | INFO     | all workflow threads have been joined
[2025-10-13 01:00:06] 2025-10-13 04:59:44,100 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:00:06] 2025-10-13 04:59:44,101 | INFO     | traces error code: 0
[2025-10-13 01:00:06] 2025-10-13 04:59:44,101 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:00:06] 2025-10-13 04:59:44,642 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:00:06] 2025-10-13 04:59:44,646 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:00:06] 2025-10-13 04:59:44,650 [wrapper] pilotpid: 3945173
[2025-10-13 01:00:06] 2025-10-13 04:59:44,655 [wrapper] Pilot exit status: 0
[2025-10-13 01:00:06] 2025-10-13 04:59:44,889 [wrapper] pandaids: 6840854379
[2025-10-13 01:00:06] 2025-10-13 04:59:45,652 [wrapper] cleanup supervisor_pilot  521697 3945174
[2025-10-13 01:00:06] 2025-10-13 04:59:45,680 [wrapper] Test setup, not cleaning
[2025-10-13 01:00:06] 2025-10-13 04:59:45,741 [wrapper] apfmon messages muted
[2025-10-13 01:00:06] 2025-10-13 04:59:45,842 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:00:06] 2025-10-13 04:59:45,878 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:00:06]  *** Error codes and diagnostics ***
[2025-10-13 01:00:06]     "exeErrorCode": 0,
[2025-10-13 01:00:06]     "exeErrorDiag": "",
[2025-10-13 01:00:06]     "pilotErrorCode": 0,
[2025-10-13 01:00:06]     "pilotErrorDiag": "",
[2025-10-13 01:00:06]  *** Listing of results directory ***
[2025-10-13 01:00:06] total 415428
[2025-10-13 01:00:06] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 18:49 pilot3.tar.gz
[2025-10-13 01:00:06] -rwx------. 1 boincer umatlas     36292 Oct 12 18:55 runpilot2-wrapper.sh
[2025-10-13 01:00:06] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:55 queuedata.json
[2025-10-13 01:00:06] -rw-r--r--. 1 boincer umatlas       100 Oct 12 20:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:00:06] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 20:49 run_atlas
[2025-10-13 01:00:06] -rw-r--r--. 1 boincer umatlas       105 Oct 12 20:49 job.xml
[2025-10-13 01:00:06] -rw-r--r--. 2 boincer umatlas 220562315 Oct 12 20:49 EVNT.46676267._004636.pool.root.1
[2025-10-13 01:00:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:49 start_atlas.sh
[2025-10-13 01:00:06] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 20:49 shared
[2025-10-13 01:00:06] -rw-r--r--. 2 boincer umatlas    569674 Oct 12 20:49 input.tar.gz
[2025-10-13 01:00:06] -rw-r--r--. 1 boincer umatlas         0 Oct 12 20:49 boinc_lockfile
[2025-10-13 01:00:06] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 20:49 pandaJob.out
[2025-10-13 01:00:06] -rw-------. 1 boincer umatlas    975603 Oct 12 20:50 agis_schedconf.cvmfs.json
[2025-10-13 01:00:06] drwx------. 5 boincer umatlas      4096 Oct 12 20:50 pilot3
[2025-10-13 01:00:06] -rw-------. 1 boincer umatlas 196633525 Oct 13 00:54 HITS.46676269._091615.pool.root.1
[2025-10-13 01:00:06] -rw-r--r--. 1 boincer umatlas       531 Oct 13 00:54 boinc_task_state.xml
[2025-10-13 01:00:06] -rw-------. 1 boincer umatlas      1044 Oct 13 00:57 memory_monitor_summary.json
[2025-10-13 01:00:06] -rw-------. 1 boincer umatlas   1560580 Oct 13 00:57 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:00:06] -rw-------. 1 boincer umatlas    444742 Oct 13 00:57 log.46676269._091615.job.log.tgz.1
[2025-10-13 01:00:06] -rw-------. 1 boincer umatlas      7837 Oct 13 00:58 heartbeat.json
[2025-10-13 01:00:06] -rw-------. 1 boincer umatlas        95 Oct 13 00:59 pilot_heartbeat.json
[2025-10-13 01:00:06] -rw-------. 1 boincer umatlas      4824 Oct 13 00:59 pilotlog.txt
[2025-10-13 01:00:06] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 00:59 boinc_mmap_file
[2025-10-13 01:00:06] -rw-r--r--. 1 boincer umatlas        28 Oct 13 00:59 wrapper_checkpoint.txt
[2025-10-13 01:00:06] -rw-------. 1 boincer umatlas   1703153 Oct 13 00:59 log.46676269._091615.job.log.1
[2025-10-13 01:00:06] -rw-------. 1 boincer umatlas       357 Oct 13 00:59 output.list
[2025-10-13 01:00:06] -rw-r--r--. 1 boincer umatlas       620 Oct 13 00:59 runtime_log
[2025-10-13 01:00:06] -rw-------. 1 boincer umatlas   2170880 Oct 13 00:59 result.tar.gz
[2025-10-13 01:00:06] -rw-r--r--. 1 boincer umatlas      8709 Oct 13 00:59 runtime_log.err
[2025-10-13 01:00:06] -rw-------. 1 boincer umatlas       656 Oct 13 00:59 DjANDmW9JS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAxlNDmDAPvMm.diag
[2025-10-13 01:00:06] -rw-r--r--. 1 boincer umatlas      6857 Oct 13 01:00 init_data.xml
[2025-10-13 01:00:06] -rw-r--r--. 1 boincer umatlas     21050 Oct 13 01:00 stderr.txt
[2025-10-13 01:00:06] HITS file was successfully produced:
[2025-10-13 01:00:06] -rw-------. 1 boincer umatlas 196633525 Oct 13 00:54 shared/HITS.pool.root.1
[2025-10-13 01:00:06]  *** Contents of shared directory: ***
[2025-10-13 01:00:06] total 410124
[2025-10-13 01:00:06] -rw-r--r--. 2 boincer umatlas 220562315 Oct 12 20:49 ATLAS.root_0
[2025-10-13 01:00:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:49 start_atlas.sh
[2025-10-13 01:00:06] -rw-r--r--. 2 boincer umatlas    569674 Oct 12 20:49 input.tar.gz
[2025-10-13 01:00:06] -rw-------. 1 boincer umatlas 196633525 Oct 13 00:54 HITS.pool.root.1
[2025-10-13 01:00:06] -rw-------. 1 boincer umatlas   2170880 Oct 13 00:59 result.tar.gz
01:00:08 (3938025): run_atlas exited; CPU time 47813.394789
01:00:08 (3938025): called boinc_finish(0)

</stderr_txt>
]]>

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