Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
19:44:08 (1542038): wrapper (7.7.26015): starting
19:44:08 (1542038): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 19:44:08] Arguments: --nthreads 4
[2025-10-12 19:44:08] Threads: 4
[2025-10-12 19:44:08] Checking for CVMFS
[2025-10-12 19:44:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:44:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:44:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:44:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:44:08] 2.11.3.0 1528564 5224 66492 151643 3 57 2906314 4096000 4698 130560 0 22727297 99.998 175296 684 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 19:44:08] CVMFS is ok
[2025-10-12 19:44:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:44:08] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 19:44:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 19:44:08] Further information can be found at the LHC@home message board.
[2025-10-12 19:44:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:44:08] Checking for apptainer binary...
[2025-10-12 19:44:08] apptainer is not installed, using version from CVMFS
[2025-10-12 19:44:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:44:09] officedc-System-Product-Name
[2025-10-12 19:44:09] apptainer works
[2025-10-12 19:44:09] Set ATHENA_PROC_NUMBER=4
[2025-10-12 19:44:09] Set ATHENA_CORE_NUMBER=4
[2025-10-12 19:44:09] Starting ATLAS job with PandaID=6840711542
[2025-10-12 19:44:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc3/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:39:36]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:39:36] 2025-10-13 03:38:51,358 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:39:36] 2025-10-13 03:38:51,358 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:39:36] 2025-10-13 03:38:51,360 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:39:36] 2025-10-13 03:38:51,360 | INFO     | sum of square deviations: 447383272.0
[2025-10-12 21:39:36] 2025-10-13 03:38:51,361 | INFO     | sum of deviations: -3102810993.9999995
[2025-10-12 21:39:36] 2025-10-13 03:38:51,361 | INFO     | mean x: 1760323296.0
[2025-10-12 21:39:36] 2025-10-13 03:38:51,361 | INFO     | mean y: 2297482.646017699
[2025-10-12 21:39:36] 2025-10-13 03:38:51,361 | INFO     | -- intersect: 12210957970.566797
[2025-10-12 21:39:36] 2025-10-13 03:38:51,361 | INFO     | intersect: 12210957970.566797
[2025-10-12 21:39:36] 2025-10-13 03:38:51,361 | INFO     | chi2: 1.9199198644070083
[2025-10-12 21:39:36] 2025-10-13 03:38:51,361 | INFO     | sum of square deviations: 390582207.0
[2025-10-12 21:39:36] 2025-10-13 03:38:51,362 | INFO     | sum of deviations: 3340815974.999998
[2025-10-12 21:39:36] 2025-10-13 03:38:51,362 | INFO     | mean x: 1760323143.5
[2025-10-12 21:39:36] 2025-10-13 03:38:51,362 | INFO     | mean y: 2314168.685185185
[2025-10-12 21:39:36] 2025-10-13 03:38:51,362 | INFO     | -- intersect: -15054479442.41501
[2025-10-12 21:39:36] 2025-10-13 03:38:51,362 | INFO     | intersect: -15054479442.41501
[2025-10-12 21:39:36] 2025-10-13 03:38:51,362 | INFO     | chi2: 1.2611670522297813
[2025-10-12 21:39:36] 2025-10-13 03:38:51,362 | INFO     | current chi2=1.2611670522297813 (change=34.31147436878524 %)
[2025-10-12 21:39:36] 2025-10-13 03:38:51,362 | INFO     | sum of square deviations: 338804492.0
[2025-10-12 21:39:36] 2025-10-13 03:38:51,363 | INFO     | sum of deviations: 3263445465.9999995
[2025-10-12 21:39:36] 2025-10-13 03:38:51,363 | INFO     | mean x: 1760322991.0
[2025-10-12 21:39:36] 2025-10-13 03:38:51,363 | INFO     | mean y: 2313940.3980582524
[2025-10-12 21:39:36] 2025-10-13 03:38:51,363 | INFO     | -- intersect: -16953535876.594652
[2025-10-12 21:39:36] 2025-10-13 03:38:51,363 | INFO     | intersect: -16953535876.594652
[2025-10-12 21:39:36] 2025-10-13 03:38:51,363 | INFO     | chi2: 1.263007045555498
[2025-10-12 21:39:36] 2025-10-13 03:38:51,363 | INFO     | current chi2=1.263007045555498 (change=-0.14589608271668308 %)
[2025-10-12 21:39:36] 2025-10-13 03:38:51,363 | INFO     | right removable region: 102
[2025-10-12 21:39:36] 2025-10-13 03:38:51,363 | INFO     | sum of square deviations: 390582207.0
[2025-10-12 21:39:36] 2025-10-13 03:38:51,364 | INFO     | sum of deviations: -13279782380.5
[2025-10-12 21:39:36] 2025-10-13 03:38:51,364 | INFO     | mean x: 1760323448.5
[2025-10-12 21:39:36] 2025-10-13 03:38:51,364 | INFO     | mean y: 2323841.3981481483
[2025-10-12 21:39:36] 2025-10-13 03:38:51,364 | INFO     | -- intersect: 59853264044.03594
[2025-10-12 21:39:36] 2025-10-13 03:38:51,364 | INFO     | intersect: 59853264044.03594
[2025-10-12 21:39:36] 2025-10-13 03:38:51,364 | INFO     | chi2: 0.7239235423369242
[2025-10-12 21:39:36] 2025-10-13 03:38:51,364 | INFO     | current chi2=0.7239235423369242 (change=62.294075093570775 %)
[2025-10-12 21:39:36] 2025-10-13 03:38:51,365 | INFO     | sum of square deviations: 338804492.0
[2025-10-12 21:39:36] 2025-10-13 03:38:51,365 | INFO     | sum of deviations: -10541285682.0
[2025-10-12 21:39:36] 2025-10-13 03:38:51,365 | INFO     | mean x: 1760323601.0
[2025-10-12 21:39:36] 2025-10-13 03:38:51,365 | INFO     | mean y: 2315760.291262136
[2025-10-12 21:39:36] 2025-10-13 03:38:51,365 | INFO     | -- intersect: 54771583609.63247
[2025-10-12 21:39:36] 2025-10-13 03:38:51,365 | INFO     | intersect: 54771583609.63247
[2025-10-12 21:39:36] 2025-10-13 03:38:51,365 | INFO     | chi2: 0.7166966644793346
[2025-10-12 21:39:36] 2025-10-13 03:38:51,365 | INFO     | current chi2=0.7166966644793346 (change=0.9982929736281729 %)
[2025-10-12 21:39:36] 2025-10-13 03:38:51,365 | INFO     | left removable region: 20
[2025-10-12 21:39:36] 2025-10-13 03:38:51,366 | INFO     | sum of square deviations: 170944600.5
[2025-10-12 21:39:36] 2025-10-13 03:38:51,366 | INFO     | sum of deviations: -780938470.0
[2025-10-12 21:39:36] 2025-10-13 03:38:51,366 | INFO     | mean x: 1760323570.5
[2025-10-12 21:39:36] 2025-10-13 03:38:51,366 | INFO     | mean y: 2321893.536585366
[2025-10-12 21:39:36] 2025-10-13 03:38:51,366 | INFO     | -- intersect: 8044134222.386405
[2025-10-12 21:39:36] 2025-10-13 03:38:51,366 | INFO     | intersect: 8044134222.386405
[2025-10-12 21:39:36] 2025-10-13 03:38:51,366 | INFO     | chi2: 0.008997505503135455
[2025-10-12 21:39:36] 2025-10-13 03:38:51,366 | INFO     | -- intersect: 8044134222.386405
[2025-10-12 21:39:36] 2025-10-13 03:38:51,366 | INFO     | current memory leak: -4.57 B/s (using 82 data points, chi2=0.01)
[2025-10-12 21:39:36] 2025-10-13 03:38:51,367 | INFO     | could have reported an average CPU frequency of 3967 MHz (7 samples)
[2025-10-12 21:39:36] 2025-10-13 03:38:51,367 | INFO     | ..............................
[2025-10-12 21:39:36] 2025-10-13 03:38:51,367 | INFO     | . Timing measurements:
[2025-10-12 21:39:36] 2025-10-13 03:38:51,367 | INFO     | . get job = 0 s
[2025-10-12 21:39:36] 2025-10-13 03:38:51,367 | INFO     | . initial setup = 3 s
[2025-10-12 21:39:36] 2025-10-13 03:38:51,367 | INFO     | . payload setup = 3 s
[2025-10-12 21:39:36] 2025-10-13 03:38:51,367 | INFO     | . stage-in = 0 s
[2025-10-12 21:39:36] 2025-10-13 03:38:51,367 | INFO     | . payload execution = 6839 s
[2025-10-12 21:39:36] 2025-10-13 03:38:51,367 | INFO     | . stage-out = 0 s
[2025-10-12 21:39:36] 2025-10-13 03:38:51,367 | INFO     | . log creation = 0 s
[2025-10-12 21:39:36] 2025-10-13 03:38:51,367 | INFO     | ..............................
[2025-10-12 21:39:36] 2025-10-13 03:38:51,445 | INFO     | 
[2025-10-12 21:39:36] 2025-10-13 03:38:51,445 | INFO     | job summary report
[2025-10-12 21:39:36] 2025-10-13 03:38:51,445 | INFO     | --------------------------------------------------
[2025-10-12 21:39:36] 2025-10-13 03:38:51,445 | INFO     | PanDA job id: 6840711542
[2025-10-12 21:39:36] 2025-10-13 03:38:51,445 | INFO     | task id: 46676269
[2025-10-12 21:39:36] 2025-10-13 03:38:51,446 | INFO     | errors: (none)
[2025-10-12 21:39:36] 2025-10-13 03:38:51,446 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:39:36] 2025-10-13 03:38:51,446 | INFO     | pilot state: finished 
[2025-10-12 21:39:36] 2025-10-13 03:38:51,446 | INFO     | transexitcode: 0
[2025-10-12 21:39:36] 2025-10-13 03:38:51,446 | INFO     | exeerrorcode: 0
[2025-10-12 21:39:36] 2025-10-13 03:38:51,446 | INFO     | exeerrordiag: 
[2025-10-12 21:39:36] 2025-10-13 03:38:51,446 | INFO     | exitcode: 0
[2025-10-12 21:39:36] 2025-10-13 03:38:51,446 | INFO     | exitmsg: OK
[2025-10-12 21:39:36] 2025-10-13 03:38:51,446 | INFO     | cpuconsumptiontime: 26322 s
[2025-10-12 21:39:36] 2025-10-13 03:38:51,446 | INFO     | nevents: 400
[2025-10-12 21:39:36] 2025-10-13 03:38:51,446 | INFO     | neventsw: 0
[2025-10-12 21:39:36] 2025-10-13 03:38:51,446 | INFO     | pid: 1553198
[2025-10-12 21:39:36] 2025-10-13 03:38:51,446 | INFO     | pgrp: 1553198
[2025-10-12 21:39:36] 2025-10-13 03:38:51,446 | INFO     | corecount: 4
[2025-10-12 21:39:36] 2025-10-13 03:38:51,447 | INFO     | event service: False
[2025-10-12 21:39:36] 2025-10-13 03:38:51,447 | INFO     | sizes: {0: 2348808, 3: 2349070, 11: 2349098, 6846: 2376417, 6847: 2385472, 6858: 2385610}
[2025-10-12 21:39:36] 2025-10-13 03:38:51,447 | INFO     | --------------------------------------------------
[2025-10-12 21:39:36] 2025-10-13 03:38:51,447 | INFO     | 
[2025-10-12 21:39:36] 2025-10-13 03:38:51,447 | INFO     | executing command: ls -lF /var/lib/boinc3/slots/5
[2025-10-12 21:39:36] 2025-10-13 03:38:51,464 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:39:36] 2025-10-13 03:38:51,464 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:39:36] 2025-10-13 03:38:51,464 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:39:36] 2025-10-13 03:38:51,464 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:39:36] 2025-10-13 03:38:51,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:39:36] 2025-10-13 03:38:51,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:39:36] 2025-10-13 03:38:51,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:39:36] 2025-10-13 03:38:51,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:39:36] 2025-10-13 03:38:51,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:39:36] 2025-10-13 03:38:51,464 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:39:36] 2025-10-13 03:38:51,464 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:39:36] 2025-10-13 03:38:51,464 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:39:36] 2025-10-13 03:38:51,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:39:36] 2025-10-13 03:38:51,465 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:39:36] 2025-10-13 03:38:51,465 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:39:36] 2025-10-13 03:38:51,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:39:36] 2025-10-13 03:38:51,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:39:36] 2025-10-13 03:38:51,465 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:39:36] 2025-10-13 03:38:51,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:39:36] 2025-10-13 03:38:51,465 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:39:36] 2025-10-13 03:38:51,465 | INFO     | job 6840711542 has completed (purged errors)
[2025-10-12 21:39:36] 2025-10-13 03:38:51,465 | INFO     | overall cleanup function is called
[2025-10-12 21:39:36] 2025-10-13 03:38:52,472 | INFO     | --- collectZombieJob: --- 10, [1553198]
[2025-10-12 21:39:36] 2025-10-13 03:38:52,472 | INFO     | zombie collector waiting for pid 1553198
[2025-10-12 21:39:36] 2025-10-13 03:38:52,472 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:39:36] 2025-10-13 03:38:52,473 | INFO     | collected zombie processes
[2025-10-12 21:39:36] 2025-10-13 03:38:52,473 | INFO     | will attempt to kill all subprocesses of pid=1553198
[2025-10-12 21:39:36] 2025-10-13 03:38:52,615 | INFO     | process IDs to be killed: [1553198] (in reverse order)
[2025-10-12 21:39:36] 2025-10-13 03:38:52,679 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:39:36] 2025-10-13 03:38:52,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:39:36] 2025-10-13 03:38:52,683 | INFO     | did not find any defunct processes belonging to 1553198
[2025-10-12 21:39:36] 2025-10-13 03:38:52,687 | INFO     | did not find any defunct processes belonging to 1553198
[2025-10-12 21:39:36] 2025-10-13 03:38:52,687 | INFO     | ready for new job
[2025-10-12 21:39:36] 2025-10-13 03:38:52,688 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:39:36] 2025-10-13 03:38:52,689 | INFO     | ***************************************
[2025-10-12 21:39:36] 2025-10-13 03:38:52,689 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:39:36] 2025-10-13 03:38:52,689 | INFO     | ***************************************
[2025-10-12 21:39:36] 2025-10-13 03:38:52,689 | INFO     | 
[2025-10-12 21:39:36] 2025-10-13 03:38:52,690 | INFO     | architecture information:
[2025-10-12 21:39:36] 2025-10-13 03:38:52,691 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:39:36] 2025-10-13 03:38:52,705 | INFO     | cat /etc/os-release:
[2025-10-12 21:39:36] NAME="CentOS Linux"
[2025-10-12 21:39:36] VERSION="7 (Core)"
[2025-10-12 21:39:36] ID="centos"
[2025-10-12 21:39:36] ID_LIKE="rhel fedora"
[2025-10-12 21:39:36] VERSION_ID="7"
[2025-10-12 21:39:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:39:36] ANSI_COLOR="0;31"
[2025-10-12 21:39:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:39:36] HOME_URL="https://www.centos.org/"
[2025-10-12 21:39:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:39:36] 
[2025-10-12 21:39:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:39:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:39:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:39:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:39:36] 
[2025-10-12 21:39:36] 2025-10-13 03:38:52,706 | INFO     | ***************************************
[2025-10-12 21:39:36] 2025-10-13 03:38:53,208 | INFO     | executing command: df -mP /var/lib/boinc3/slots/5
[2025-10-12 21:39:36] 2025-10-13 03:38:53,224 | INFO     | sufficient remaining disk space (376798445568 B)
[2025-10-12 21:39:36] 2025-10-13 03:38:53,224 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:39:36] 2025-10-13 03:38:53,224 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:39:36] 2025-10-13 03:38:53,224 | INFO     | update_server=False
[2025-10-12 21:39:36] 2025-10-13 03:38:53,224 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:39:36] 2025-10-13 03:38:53,224 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:39:36] 2025-10-13 03:38:53,224 | INFO     | aborting loop
[2025-10-12 21:39:36] 2025-10-13 03:38:53,225 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:39:36] 2025-10-13 03:38:53,686 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:39:36] 2025-10-13 03:38:53,875 | INFO     | all job control threads have been joined
[2025-10-12 21:39:36] 2025-10-13 03:38:54,046 | INFO     | all data control threads have been joined
[2025-10-12 21:39:36] 2025-10-13 03:38:54,229 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:39:36] 2025-10-13 03:38:54,230 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:39:36] 2025-10-13 03:38:54,230 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:39:36] 2025-10-13 03:38:54,253 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:39:36] 2025-10-13 03:38:54,259 | INFO     | [job] validate thread has finished
[2025-10-12 21:39:36] 2025-10-13 03:38:54,294 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:39:36] 2025-10-13 03:38:54,409 | INFO     | all payload control threads have been joined
[2025-10-12 21:39:36] 2025-10-13 03:38:54,879 | INFO     | [job] control thread has finished
[2025-10-12 21:39:36] 2025-10-13 03:38:54,928 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:39:36] 2025-10-13 03:38:55,052 | INFO     | [data] control thread has finished
[2025-10-12 21:39:36] 2025-10-13 03:38:55,414 | INFO     | [payload] control thread has finished
[2025-10-12 21:39:36] 2025-10-13 03:38:55,437 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:39:36] 2025-10-13 03:38:55,655 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:39:36] 2025-10-13 03:38:55,665 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:39:36] 2025-10-13 03:38:55,692 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:39:36] 2025-10-13 03:38:55,745 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:39:36] 2025-10-13 03:38:59,750 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:39:36] 2025-10-13 03:39:03,400 | INFO     | job.realtimelogging is not enabled
[2025-10-12 21:39:36] 2025-10-13 03:39:04,405 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:39:36] 2025-10-13 03:39:23,665 | INFO     | PID=1546533 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:39:36] 2025-10-13 03:39:23,666 | INFO     | .. there are 7 such processes running
[2025-10-12 21:39:36] 2025-10-13 03:39:23,666 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:39:36] 2025-10-13 03:39:23,666 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:39:36] 2025-10-13 03:39:23,666 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:39:36] 2025-10-13 03:39:29,685 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:39:36] 2025-10-13 03:39:31,439 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130075269297984)>', '<ExcThread(monitor, started 130074913249024)>']
[2025-10-12 21:39:36] 2025-10-13 03:39:31,704 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:39:36] 2025-10-13 03:39:31,704 | INFO     | [monitor] control thread has ended
[2025-10-12 21:39:36] 2025-10-13 03:39:36,464 | INFO     | all workflow threads have been joined
[2025-10-12 21:39:36] 2025-10-13 03:39:36,464 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:39:36] 2025-10-13 03:39:36,465 | INFO     | traces error code: 0
[2025-10-12 21:39:36] 2025-10-13 03:39:36,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:39:36] 2025-10-13 03:39:36,566 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:39:36] 2025-10-13 03:39:36,568 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:39:36] 2025-10-13 03:39:36,571 [wrapper] pilotpid: 1546533
[2025-10-12 21:39:36] 2025-10-13 03:39:36,573 [wrapper] Pilot exit status: 0
[2025-10-12 21:39:36] 2025-10-13 03:39:36,582 [wrapper] pandaids: 6840711542
[2025-10-12 21:39:36] 2025-10-13 03:39:36,627 [wrapper] cleanup supervisor_pilot 1719137 1546534
[2025-10-12 21:39:36] 2025-10-13 03:39:36,630 [wrapper] Test setup, not cleaning
[2025-10-12 21:39:36] 2025-10-13 03:39:36,632 [wrapper] apfmon messages muted
[2025-10-12 21:39:36] 2025-10-13 03:39:36,634 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:39:36] 2025-10-13 03:39:36,636 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:39:36]  *** Error codes and diagnostics ***
[2025-10-12 21:39:36]     "exeErrorCode": 0,
[2025-10-12 21:39:36]     "exeErrorDiag": "",
[2025-10-12 21:39:36]     "pilotErrorCode": 0,
[2025-10-12 21:39:36]     "pilotErrorDiag": "",
[2025-10-12 21:39:36]  *** Listing of results directory ***
[2025-10-12 21:39:36] total 415696
[2025-10-12 21:39:36] -rw-r--r-- 1 boinc boinc    557409 Oct 12 12:53 pilot3.tar.gz
[2025-10-12 21:39:36] -rw-r--r-- 1 boinc boinc      5112 Oct 12 13:09 queuedata.json
[2025-10-12 21:39:36] -rwx------ 1 boinc boinc     36292 Oct 12 13:09 runpilot2-wrapper.sh
[2025-10-12 21:39:36] -rw-rw-r-- 1 boinc boinc       100 Oct 12 19:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:39:36] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 19:44 run_atlas
[2025-10-12 21:39:36] -rw-rw-r-- 1 boinc boinc       105 Oct 12 19:44 job.xml
[2025-10-12 21:39:36] -rw-rw-r-- 1 boinc boinc      9753 Oct 12 19:44 init_data.xml
[2025-10-12 21:39:36] -rw-r--r-- 2 boinc boinc 224567452 Oct 12 19:44 EVNT.46676267._001875.pool.root.1
[2025-10-12 21:39:36] -rw-r--r-- 2 boinc boinc     15120 Oct 12 19:44 start_atlas.sh
[2025-10-12 21:39:36] drwxrwx--x 2 boinc boinc      4096 Oct 12 19:44 shared
[2025-10-12 21:39:36] -rw-r--r-- 2 boinc boinc    569686 Oct 12 19:44 input.tar.gz
[2025-10-12 21:39:36] -rw-rw-r-- 1 boinc boinc         0 Oct 12 19:44 boinc_lockfile
[2025-10-12 21:39:36] -rw-rw-r-- 1 boinc boinc      2550 Oct 12 19:44 pandaJob.out
[2025-10-12 21:39:36] -rw------- 1 boinc boinc    975595 Oct 12 19:44 agis_schedconf.cvmfs.json
[2025-10-12 21:39:36] -rw------- 1 boinc boinc   1560580 Oct 12 19:44 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:39:36] drwx------ 5 boinc boinc      4096 Oct 12 19:44 pilot3
[2025-10-12 21:39:36] -rw-rw-r-- 1 boinc boinc       529 Oct 12 21:38 boinc_task_state.xml
[2025-10-12 21:39:36] -rw------- 1 boinc boinc 194567545 Oct 12 21:38 HITS.46676269._087110.pool.root.1
[2025-10-12 21:39:36] -rw------- 1 boinc boinc      1024 Oct 12 21:38 memory_monitor_summary.json
[2025-10-12 21:39:36] -rw------- 1 boinc boinc    312597 Oct 12 21:38 log.46676269._087110.job.log.tgz.1
[2025-10-12 21:39:36] -rw------- 1 boinc boinc        95 Oct 12 21:38 pilot_heartbeat.json
[2025-10-12 21:39:36] -rw------- 1 boinc boinc      7775 Oct 12 21:38 heartbeat.json
[2025-10-12 21:39:36] -rw-rw-r-- 1 boinc boinc      8192 Oct 12 21:39 boinc_mmap_file
[2025-10-12 21:39:36] -rw-rw-r-- 1 boinc boinc        27 Oct 12 21:39 wrapper_checkpoint.txt
[2025-10-12 21:39:36] -rw------- 1 boinc boinc      4897 Oct 12 21:39 pilotlog.txt
[2025-10-12 21:39:36] -rw------- 1 boinc boinc   1002765 Oct 12 21:39 log.46676269._087110.job.log.1
[2025-10-12 21:39:36] -rw------- 1 boinc boinc       357 Oct 12 21:39 output.list
[2025-10-12 21:39:36] -rw-rw-r-- 1 boinc boinc       620 Oct 12 21:39 runtime_log
[2025-10-12 21:39:36] -rw------- 1 boinc boinc   1331200 Oct 12 21:39 result.tar.gz
[2025-10-12 21:39:36] -rw-rw-r-- 1 boinc boinc      8755 Oct 12 21:39 runtime_log.err
[2025-10-12 21:39:36] -rw------- 1 boinc boinc       658 Oct 12 21:39 dn5LDmzcGS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm8kUMDmMMs14m.diag
[2025-10-12 21:39:36] -rw-rw-r-- 1 boinc boinc     20953 Oct 12 21:39 stderr.txt
[2025-10-12 21:39:36] HITS file was successfully produced:
[2025-10-12 21:39:36] -rw------- 1 boinc boinc 194567545 Oct 12 21:38 shared/HITS.pool.root.1
[2025-10-12 21:39:36]  *** Contents of shared directory: ***
[2025-10-12 21:39:36] total 411200
[2025-10-12 21:39:36] -rw-r--r-- 2 boinc boinc 224567452 Oct 12 19:44 ATLAS.root_0
[2025-10-12 21:39:36] -rw-r--r-- 2 boinc boinc     15120 Oct 12 19:44 start_atlas.sh
[2025-10-12 21:39:36] -rw-r--r-- 2 boinc boinc    569686 Oct 12 19:44 input.tar.gz
[2025-10-12 21:39:36] -rw------- 1 boinc boinc 194567545 Oct 12 21:38 HITS.pool.root.1
[2025-10-12 21:39:36] -rw------- 1 boinc boinc   1331200 Oct 12 21:39 result.tar.gz
21:39:37 (1542038): run_atlas exited; CPU time 26389.715316
21:39:37 (1542038): called boinc_finish(0)

</stderr_txt>
]]>

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