Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:48:31 (25626): wrapper (7.7.26015): starting
20:48:31 (25626): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:48:31] Arguments: --nthreads 8
[2025-10-12 20:48:31] Threads: 8
[2025-10-12 20:48:31] Checking for CVMFS
[2025-10-12 20:48:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:48:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:48:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:48:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:48:32] 2.11.2.0 3869 39334 132688 151642 3 59 9293305 18432001 1833 130560 0 39523727 99.994 1280574 37617 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 20:48:32] CVMFS is ok
[2025-10-12 20:48:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:48:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:48:32] Further information can be found at the LHC@home message board.
[2025-10-12 20:48:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:48:32] Checking for apptainer binary...
[2025-10-12 20:48:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:48:32] Running /usr/bin/apptainer --version
[2025-10-12 20:48:32] apptainer version 1.3.2-1.el7
[2025-10-12 20:48:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:48:32] c-206-12.aglt2.org
[2025-10-12 20:48:32] apptainer works
[2025-10-12 20:48:32] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:48:32] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:48:32] Starting ATLAS job with PandaID=6840749300
[2025-10-12 20:48:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:40:05]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:40:05] 2025-10-13 03:39:40,386 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840749300/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:40:05] 2025-10-13 03:39:40,387 | INFO     | extracted standard info from prmon json
[2025-10-12 23:40:05] 2025-10-13 03:39:40,387 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:40:05] 2025-10-13 03:39:40,387 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:40:05] 2025-10-13 03:39:40,387 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:40:05] 2025-10-13 03:39:40,387 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:40:05] 2025-10-13 03:39:40,390 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:40:05] 2025-10-13 03:39:40,390 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 23:40:05] 2025-10-13 03:39:40,391 | INFO     | sum of deviations: 5247084336.000008
[2025-10-12 23:40:05] 2025-10-13 03:39:40,391 | INFO     | mean x: 1760321641.5
[2025-10-12 23:40:05] 2025-10-13 03:39:40,391 | INFO     | mean y: 2514969.261904762
[2025-10-12 23:40:05] 2025-10-13 03:39:40,391 | INFO     | -- intersect: -6279792551.548622
[2025-10-12 23:40:05] 2025-10-13 03:39:40,392 | INFO     | intersect: -6279792551.548622
[2025-10-12 23:40:05] 2025-10-13 03:39:40,392 | INFO     | chi2: 1.4811288635939337
[2025-10-12 23:40:05] 2025-10-13 03:39:40,392 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 23:40:05] 2025-10-13 03:39:40,393 | INFO     | sum of deviations: 5045154938.000002
[2025-10-12 23:40:05] 2025-10-13 03:39:40,393 | INFO     | mean x: 1760321489.0
[2025-10-12 23:40:05] 2025-10-13 03:39:40,393 | INFO     | mean y: 2514727.5398773006
[2025-10-12 23:40:05] 2025-10-13 03:39:40,393 | INFO     | -- intersect: -6611141360.489124
[2025-10-12 23:40:05] 2025-10-13 03:39:40,393 | INFO     | intersect: -6611141360.489124
[2025-10-12 23:40:05] 2025-10-13 03:39:40,394 | INFO     | chi2: 1.481743297550755
[2025-10-12 23:40:05] 2025-10-13 03:39:40,394 | INFO     | current chi2=1.481743297550755 (change=-0.04148416602525355 %)
[2025-10-12 23:40:05] 2025-10-13 03:39:40,394 | INFO     | right removable region: 162
[2025-10-12 23:40:05] 2025-10-13 03:39:40,394 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 23:40:05] 2025-10-13 03:39:40,395 | INFO     | sum of deviations: -18434242883.0
[2025-10-12 23:40:05] 2025-10-13 03:39:40,395 | INFO     | mean x: 1760321794.0
[2025-10-12 23:40:05] 2025-10-13 03:39:40,395 | INFO     | mean y: 2542907.055214724
[2025-10-12 23:40:05] 2025-10-13 03:39:40,395 | INFO     | -- intersect: 24167858996.162457
[2025-10-12 23:40:05] 2025-10-13 03:39:40,395 | INFO     | intersect: 24167858996.162457
[2025-10-12 23:40:05] 2025-10-13 03:39:40,395 | INFO     | chi2: 0.1349396544981616
[2025-10-12 23:40:05] 2025-10-13 03:39:40,396 | INFO     | current chi2=0.1349396544981616 (change=90.88940484417184 %)
[2025-10-12 23:40:05] 2025-10-13 03:39:40,396 | INFO     | sum of square deviations: 1223016419.5
[2025-10-12 23:40:05] 2025-10-13 03:39:40,396 | INFO     | sum of deviations: -15531122952.999996
[2025-10-12 23:40:05] 2025-10-13 03:39:40,397 | INFO     | mean x: 1760321946.5
[2025-10-12 23:40:05] 2025-10-13 03:39:40,397 | INFO     | mean y: 2539161.481012658
[2025-10-12 23:40:05] 2025-10-13 03:39:40,397 | INFO     | -- intersect: 22356921451.07691
[2025-10-12 23:40:05] 2025-10-13 03:39:40,397 | INFO     | intersect: 22356921451.07691
[2025-10-12 23:40:05] 2025-10-13 03:39:40,397 | INFO     | chi2: 0.1229142199456641
[2025-10-12 23:40:05] 2025-10-13 03:39:40,397 | INFO     | current chi2=0.1229142199456641 (change=8.91171286692551 %)
[2025-10-12 23:40:05] 2025-10-13 03:39:40,397 | INFO     | left removable region: 20
[2025-10-12 23:40:05] 2025-10-13 03:39:40,398 | INFO     | sum of square deviations: 887813855.5
[2025-10-12 23:40:05] 2025-10-13 03:39:40,398 | INFO     | sum of deviations: -4904883455.5
[2025-10-12 23:40:05] 2025-10-13 03:39:40,398 | INFO     | mean x: 1760322068.5
[2025-10-12 23:40:05] 2025-10-13 03:39:40,398 | INFO     | mean y: 2524364.1619718308
[2025-10-12 23:40:05] 2025-10-13 03:39:40,399 | INFO     | -- intersect: 9727732567.039797
[2025-10-12 23:40:05] 2025-10-13 03:39:40,399 | INFO     | intersect: 9727732567.039797
[2025-10-12 23:40:05] 2025-10-13 03:39:40,399 | INFO     | chi2: 0.07287490877777283
[2025-10-12 23:40:05] 2025-10-13 03:39:40,399 | INFO     | -- intersect: 9727732567.039797
[2025-10-12 23:40:05] 2025-10-13 03:39:40,399 | INFO     | current memory leak: -5.52 B/s (using 142 data points, chi2=0.07)
[2025-10-12 23:40:05] 2025-10-13 03:39:40,399 | INFO     | could have reported an average CPU frequency of 2583 MHz (9 samples)
[2025-10-12 23:40:05] 2025-10-13 03:39:40,400 | INFO     | ..............................
[2025-10-12 23:40:05] 2025-10-13 03:39:40,400 | INFO     | . Timing measurements:
[2025-10-12 23:40:05] 2025-10-13 03:39:40,400 | INFO     | . get job = 0 s
[2025-10-12 23:40:05] 2025-10-13 03:39:40,400 | INFO     | . initial setup = 2 s
[2025-10-12 23:40:05] 2025-10-13 03:39:40,400 | INFO     | . payload setup = 4 s
[2025-10-12 23:40:05] 2025-10-13 03:39:40,400 | INFO     | . stage-in = 0 s
[2025-10-12 23:40:05] 2025-10-13 03:39:40,400 | INFO     | . payload execution = 10227 s
[2025-10-12 23:40:05] 2025-10-13 03:39:40,400 | INFO     | . stage-out = 1 s
[2025-10-12 23:40:05] 2025-10-13 03:39:40,400 | INFO     | . log creation = 0 s
[2025-10-12 23:40:05] 2025-10-13 03:39:40,401 | INFO     | ..............................
[2025-10-12 23:40:05] 2025-10-13 03:39:40,671 | INFO     | time since job start (10257s) is within the limit (172800.0s)
[2025-10-12 23:40:05] 2025-10-13 03:39:40,776 | INFO     | 
[2025-10-12 23:40:05] 2025-10-13 03:39:40,777 | INFO     | job summary report
[2025-10-12 23:40:05] 2025-10-13 03:39:40,777 | INFO     | --------------------------------------------------
[2025-10-12 23:40:05] 2025-10-13 03:39:40,777 | INFO     | PanDA job id: 6840749300
[2025-10-12 23:40:05] 2025-10-13 03:39:40,777 | INFO     | task id: 46676269
[2025-10-12 23:40:05] 2025-10-13 03:39:40,777 | INFO     | errors: (none)
[2025-10-12 23:40:05] 2025-10-13 03:39:40,778 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:40:05] 2025-10-13 03:39:40,778 | INFO     | pilot state: finished 
[2025-10-12 23:40:05] 2025-10-13 03:39:40,778 | INFO     | transexitcode: 0
[2025-10-12 23:40:05] 2025-10-13 03:39:40,778 | INFO     | exeerrorcode: 0
[2025-10-12 23:40:05] 2025-10-13 03:39:40,778 | INFO     | exeerrordiag: 
[2025-10-12 23:40:05] 2025-10-13 03:39:40,779 | INFO     | exitcode: 0
[2025-10-12 23:40:05] 2025-10-13 03:39:40,779 | INFO     | exitmsg: OK
[2025-10-12 23:40:05] 2025-10-13 03:39:40,779 | INFO     | cpuconsumptiontime: 77531 s
[2025-10-12 23:40:05] 2025-10-13 03:39:40,779 | INFO     | nevents: 400
[2025-10-12 23:40:05] 2025-10-13 03:39:40,779 | INFO     | neventsw: 0
[2025-10-12 23:40:05] 2025-10-13 03:39:40,779 | INFO     | pid: 3501
[2025-10-12 23:40:05] 2025-10-13 03:39:40,780 | INFO     | pgrp: 3501
[2025-10-12 23:40:05] 2025-10-13 03:39:40,780 | INFO     | corecount: 8
[2025-10-12 23:40:05] 2025-10-13 03:39:40,780 | INFO     | event service: False
[2025-10-12 23:40:05] 2025-10-13 03:39:40,780 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 12: 2349175, 10236: 2377920, 10238: 2387102, 10242: 2387304}
[2025-10-12 23:40:05] 2025-10-13 03:39:40,780 | INFO     | --------------------------------------------------
[2025-10-12 23:40:05] 2025-10-13 03:39:40,780 | INFO     | 
[2025-10-12 23:40:05] 2025-10-13 03:39:40,781 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 23:40:05] 2025-10-13 03:39:40,802 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:40:05] 2025-10-13 03:39:40,803 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:40:05] 2025-10-13 03:39:40,803 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:40:05] 2025-10-13 03:39:40,803 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:40:05] 2025-10-13 03:39:40,803 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:40:05] 2025-10-13 03:39:40,803 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:40:05] 2025-10-13 03:39:40,803 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:40:05] 2025-10-13 03:39:40,803 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:40:05] 2025-10-13 03:39:40,803 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:40:05] 2025-10-13 03:39:40,804 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:40:05] 2025-10-13 03:39:40,804 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:40:05] 2025-10-13 03:39:40,804 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:40:05] 2025-10-13 03:39:40,804 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:40:05] 2025-10-13 03:39:40,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:40:05] 2025-10-13 03:39:40,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:40:05] 2025-10-13 03:39:40,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:40:05] 2025-10-13 03:39:40,804 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:40:05] 2025-10-13 03:39:40,804 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:40:05] 2025-10-13 03:39:40,805 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:40:05] 2025-10-13 03:39:40,805 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:40:05] 2025-10-13 03:39:40,805 | INFO     | job 6840749300 has completed (purged errors)
[2025-10-12 23:40:05] 2025-10-13 03:39:40,805 | INFO     | overall cleanup function is called
[2025-10-12 23:40:05] 2025-10-13 03:39:41,142 | WARNING  | process 3501 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 23:40:05] 2025-10-13 03:39:41,277 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:40:05] 2025-10-13 03:39:41,439 | INFO     | number of running child processes to parent process 3501: 1
[2025-10-12 23:40:05] 2025-10-13 03:39:41,439 | INFO     | maximum number of monitored processes: 6
[2025-10-12 23:40:05] 2025-10-13 03:39:41,439 | INFO     | aborting job monitoring since job object (job id=6840749300) has expired
[2025-10-12 23:40:05] 2025-10-13 03:39:41,811 | INFO     | --- collectZombieJob: --- 10, [3501]
[2025-10-12 23:40:05] 2025-10-13 03:39:41,812 | INFO     | zombie collector waiting for pid 3501
[2025-10-12 23:40:05] 2025-10-13 03:39:41,812 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:40:05] 2025-10-13 03:39:41,812 | INFO     | collected zombie processes
[2025-10-12 23:40:05] 2025-10-13 03:39:41,812 | INFO     | will attempt to kill all subprocesses of pid=3501
[2025-10-12 23:40:05] 2025-10-13 03:39:41,947 | INFO     | process IDs to be killed: [3501] (in reverse order)
[2025-10-12 23:40:05] 2025-10-13 03:39:41,992 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:40:05] 2025-10-13 03:39:41,992 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:40:05] 2025-10-13 03:39:41,996 | INFO     | did not find any defunct processes belonging to 3501
[2025-10-12 23:40:05] 2025-10-13 03:39:41,998 | INFO     | did not find any defunct processes belonging to 3501
[2025-10-12 23:40:05] 2025-10-13 03:39:41,998 | INFO     | ready for new job
[2025-10-12 23:40:05] 2025-10-13 03:39:41,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:40:05] 2025-10-13 03:39:42,000 | INFO     | ***************************************
[2025-10-12 23:40:05] 2025-10-13 03:39:42,000 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:40:05] 2025-10-13 03:39:42,000 | INFO     | ***************************************
[2025-10-12 23:40:05] 2025-10-13 03:39:42,000 | INFO     | 
[2025-10-12 23:40:05] 2025-10-13 03:39:42,001 | INFO     | architecture information:
[2025-10-12 23:40:05] 2025-10-13 03:39:42,001 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:40:05] 2025-10-13 03:39:42,016 | INFO     | cat /etc/os-release:
[2025-10-12 23:40:05] NAME="CentOS Linux"
[2025-10-12 23:40:05] VERSION="7 (Core)"
[2025-10-12 23:40:05] ID="centos"
[2025-10-12 23:40:05] ID_LIKE="rhel fedora"
[2025-10-12 23:40:05] VERSION_ID="7"
[2025-10-12 23:40:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:40:05] ANSI_COLOR="0;31"
[2025-10-12 23:40:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:40:05] HOME_URL="https://www.centos.org/"
[2025-10-12 23:40:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:40:05] 
[2025-10-12 23:40:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:40:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:40:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:40:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:40:05] 
[2025-10-12 23:40:05] 2025-10-13 03:39:42,016 | INFO     | ***************************************
[2025-10-12 23:40:05] 2025-10-13 03:39:42,520 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 23:40:05] 2025-10-13 03:39:42,536 | INFO     | sufficient remaining disk space (28057796608 B)
[2025-10-12 23:40:05] 2025-10-13 03:39:42,537 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:40:05] 2025-10-13 03:39:42,537 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:40:05] 2025-10-13 03:39:42,537 | INFO     | update_server=False
[2025-10-12 23:40:05] 2025-10-13 03:39:42,538 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:40:05] 2025-10-13 03:39:42,538 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 23:40:05] 2025-10-13 03:39:42,538 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:40:05] 2025-10-13 03:39:42,538 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:40:05] 2025-10-13 03:39:42,539 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:40:05] 2025-10-13 03:39:42,539 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:40:05] 2025-10-13 03:39:42,539 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:40:05] 2025-10-13 03:39:42,539 | INFO     | aborting loop
[2025-10-12 23:40:05] 2025-10-13 03:39:42,612 | INFO     | all data control threads have been joined
[2025-10-12 23:40:05] 2025-10-13 03:39:42,958 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:40:05] 2025-10-13 03:39:43,361 | INFO     | all payload control threads have been joined
[2025-10-12 23:40:05] 2025-10-13 03:39:43,543 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:40:05] 2025-10-13 03:39:43,545 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:40:05] 2025-10-13 03:39:43,617 | INFO     | [data] control thread has finished
[2025-10-12 23:40:05] 2025-10-13 03:39:43,712 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:40:05] 2025-10-13 03:39:43,719 | INFO     | all job control threads have been joined
[2025-10-12 23:40:05] 2025-10-13 03:39:43,784 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:40:05] 2025-10-13 03:39:44,061 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:40:05] 2025-10-13 03:39:44,123 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:40:05] 2025-10-13 03:39:44,209 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:40:05] 2025-10-13 03:39:44,367 | INFO     | [payload] control thread has finished
[2025-10-12 23:40:05] 2025-10-13 03:39:44,514 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:40:05] 2025-10-13 03:39:44,544 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:40:05] 2025-10-13 03:39:44,724 | INFO     | [job] control thread has finished
[2025-10-12 23:40:05] 2025-10-13 03:39:44,800 | INFO     | [job] validate thread has finished
[2025-10-12 23:40:05] 2025-10-13 03:39:45,045 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:40:05] 2025-10-13 03:39:45,490 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:40:05] 2025-10-13 03:39:46,496 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:40:05] 2025-10-13 03:39:46,966 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:40:05] 2025-10-13 03:39:59,850 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:40:05] 2025-10-13 03:40:00,406 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139765926729536)>', '<ExcThread(monitor, started 139765349349120)>']
[2025-10-12 23:40:05] 2025-10-13 03:40:00,627 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:40:05] 2025-10-13 03:40:00,627 | INFO     | [monitor] control thread has ended
[2025-10-12 23:40:05] 2025-10-13 03:40:05,431 | INFO     | all workflow threads have been joined
[2025-10-12 23:40:05] 2025-10-13 03:40:05,431 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:40:05] 2025-10-13 03:40:05,432 | INFO     | traces error code: 0
[2025-10-12 23:40:05] 2025-10-13 03:40:05,432 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:40:05] 2025-10-13 03:40:05,557 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:40:05] 2025-10-13 03:40:05,560 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:40:05] 2025-10-13 03:40:05,562 [wrapper] pilotpid: 29282
[2025-10-12 23:40:05] 2025-10-13 03:40:05,564 [wrapper] Pilot exit status: 0
[2025-10-12 23:40:05] 2025-10-13 03:40:05,574 [wrapper] pandaids: 6840749300
[2025-10-12 23:40:05] 2025-10-13 03:40:05,611 [wrapper] cleanup supervisor_pilot 15185 29283
[2025-10-12 23:40:05] 2025-10-13 03:40:05,614 [wrapper] Test setup, not cleaning
[2025-10-12 23:40:05] 2025-10-13 03:40:05,616 [wrapper] apfmon messages muted
[2025-10-12 23:40:05] 2025-10-13 03:40:05,619 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:40:05] 2025-10-13 03:40:05,621 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:40:05]  *** Error codes and diagnostics ***
[2025-10-12 23:40:05]     "exeErrorCode": 0,
[2025-10-12 23:40:05]     "exeErrorDiag": "",
[2025-10-12 23:40:05]     "pilotErrorCode": 0,
[2025-10-12 23:40:05]     "pilotErrorDiag": "",
[2025-10-12 23:40:05]  *** Listing of results directory ***
[2025-10-12 23:40:05] total 415220
[2025-10-12 23:40:05] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 16:23 pilot3.tar.gz
[2025-10-12 23:40:05] -rwx------ 1 boincer umatlas     36292 Oct 12 16:35 runpilot2-wrapper.sh
[2025-10-12 23:40:05] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 16:35 queuedata.json
[2025-10-12 23:40:05] -rw-r--r-- 1 boincer umatlas       100 Oct 12 20:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:40:05] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 20:48 run_atlas
[2025-10-12 23:40:05] -rw-r--r-- 1 boincer umatlas       105 Oct 12 20:48 job.xml
[2025-10-12 23:40:05] -rw-r--r-- 2 boincer umatlas 224055312 Oct 12 20:48 EVNT.46676267._004852.pool.root.1
[2025-10-12 23:40:05] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:48 start_atlas.sh
[2025-10-12 23:40:05] drwxrwx--x 2 boincer umatlas      4096 Oct 12 20:48 shared
[2025-10-12 23:40:05] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 20:48 input.tar.gz
[2025-10-12 23:40:05] -rw-r--r-- 1 boincer umatlas         0 Oct 12 20:48 boinc_lockfile
[2025-10-12 23:40:05] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 20:48 pandaJob.out
[2025-10-12 23:40:05] -rw------- 1 boincer umatlas    975603 Oct 12 20:48 agis_schedconf.cvmfs.json
[2025-10-12 23:40:05] -rw------- 1 boincer umatlas   1560580 Oct 12 20:48 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:40:05] drwx------ 5 boincer umatlas      4096 Oct 12 20:48 pilot3
[2025-10-12 23:40:05] -rw------- 1 boincer umatlas 193535064 Oct 12 23:39 HITS.46676269._088821.pool.root.1
[2025-10-12 23:40:05] -rw-r--r-- 1 boincer umatlas       531 Oct 12 23:39 boinc_task_state.xml
[2025-10-12 23:40:05] -rw------- 1 boincer umatlas        95 Oct 12 23:39 pilot_heartbeat.json
[2025-10-12 23:40:05] -rw------- 1 boincer umatlas      1053 Oct 12 23:39 memory_monitor_summary.json
[2025-10-12 23:40:05] -rw------- 1 boincer umatlas    408228 Oct 12 23:39 log.46676269._088821.job.log.tgz.1
[2025-10-12 23:40:05] -rw------- 1 boincer umatlas      7858 Oct 12 23:39 heartbeat.json
[2025-10-12 23:40:05] -rw-r--r-- 1 boincer umatlas        28 Oct 12 23:40 wrapper_checkpoint.txt
[2025-10-12 23:40:05] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 23:40 init_data.xml
[2025-10-12 23:40:05] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 23:40 boinc_mmap_file
[2025-10-12 23:40:05] -rw------- 1 boincer umatlas      4552 Oct 12 23:40 pilotlog.txt
[2025-10-12 23:40:05] -rw------- 1 boincer umatlas   1440237 Oct 12 23:40 log.46676269._088821.job.log.1
[2025-10-12 23:40:05] -rw------- 1 boincer umatlas       357 Oct 12 23:40 output.list
[2025-10-12 23:40:05] -rw-r--r-- 1 boincer umatlas       620 Oct 12 23:40 runtime_log
[2025-10-12 23:40:05] -rw------- 1 boincer umatlas   1863680 Oct 12 23:40 result.tar.gz
[2025-10-12 23:40:05] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 23:40 runtime_log.err
[2025-10-12 23:40:05] -rw------- 1 boincer umatlas       662 Oct 12 23:40 5etMDmkxHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmzxUMDmxeK0tm.diag
[2025-10-12 23:40:05] -rw-r--r-- 1 boincer umatlas     21036 Oct 12 23:40 stderr.txt
[2025-10-12 23:40:05] HITS file was successfully produced:
[2025-10-12 23:40:05] -rw------- 1 boincer umatlas 193535064 Oct 12 23:39 shared/HITS.pool.root.1
[2025-10-12 23:40:05]  *** Contents of shared directory: ***
[2025-10-12 23:40:05] total 410208
[2025-10-12 23:40:05] -rw-r--r-- 2 boincer umatlas 224055312 Oct 12 20:48 ATLAS.root_0
[2025-10-12 23:40:05] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:48 start_atlas.sh
[2025-10-12 23:40:05] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 20:48 input.tar.gz
[2025-10-12 23:40:05] -rw------- 1 boincer umatlas 193535064 Oct 12 23:39 HITS.pool.root.1
[2025-10-12 23:40:05] -rw------- 1 boincer umatlas   1863680 Oct 12 23:40 result.tar.gz
23:40:06 (25626): run_atlas exited; CPU time 77710.401740
23:40:06 (25626): called boinc_finish(0)

</stderr_txt>
]]>

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