Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:23:07 (3420613): wrapper (7.7.26015): starting
11:23:07 (3420613): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 11:23:07] Arguments: --nthreads 3
[2025-10-13 11:23:07] Threads: 3
[2025-10-13 11:23:07] Checking for CVMFS
[2025-10-13 11:23:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 11:23:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 11:23:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 11:23:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 11:23:07] 2.9.2.0 1692675 5628 86428 151656 1 56 29581189 36864001 0 130560 0 4529289 99.991 190883 873 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 11:23:07] CVMFS is ok
[2025-10-13 11:23:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 11:23:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 11:23:07] Further information can be found at the LHC@home message board.
[2025-10-13 11:23:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 11:23:07] Checking for apptainer binary...
[2025-10-13 11:23:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 11:23:07] Running /usr/bin/apptainer --version
[2025-10-13 11:23:07] apptainer version 1.4.1-1.1
[2025-10-13 11:23:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 11:23:07] thA337a
[2025-10-13 11:23:07] apptainer works
[2025-10-13 11:23:07] Set ATHENA_PROC_NUMBER=3
[2025-10-13 11:23:07] Set ATHENA_CORE_NUMBER=3
[2025-10-13 11:23:07] Starting ATLAS job with PandaID=6840712947
[2025-10-13 11:23:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:40:34]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:40:34] 2025-10-13 10:40:03,946 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:40:34] 2025-10-13 10:40:03,955 | INFO     | cat /etc/os-release:
[2025-10-13 12:40:34] NAME="CentOS Linux"
[2025-10-13 12:40:34] VERSION="7 (Core)"
[2025-10-13 12:40:34] ID="centos"
[2025-10-13 12:40:34] ID_LIKE="rhel fedora"
[2025-10-13 12:40:34] VERSION_ID="7"
[2025-10-13 12:40:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:40:34] ANSI_COLOR="0;31"
[2025-10-13 12:40:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:40:34] HOME_URL="https://www.centos.org/"
[2025-10-13 12:40:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:40:34] 
[2025-10-13 12:40:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:40:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:40:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:40:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:40:34] 
[2025-10-13 12:40:34] 2025-10-13 10:40:03,955 | INFO     | ***************************************
[2025-10-13 12:40:34] 2025-10-13 10:40:04,457 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 12:40:34] 2025-10-13 10:40:04,469 | INFO     | sufficient remaining disk space (375537008640 B)
[2025-10-13 12:40:34] 2025-10-13 10:40:04,469 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:40:34] 2025-10-13 10:40:04,470 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:40:34] 2025-10-13 10:40:04,470 | INFO     | update_server=False
[2025-10-13 12:40:34] 2025-10-13 10:40:04,470 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:40:34] 2025-10-13 10:40:04,470 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:40:34] 2025-10-13 10:40:04,470 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:40:34] 2025-10-13 10:40:04,470 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:40:34] 2025-10-13 10:40:05,229 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:40:34] 2025-10-13 10:40:05,229 | INFO     | aborting loop
[2025-10-13 12:40:34] 2025-10-13 10:40:05,265 | INFO     | all job control threads have been joined
[2025-10-13 12:40:34] 2025-10-13 10:40:05,457 | INFO     | all data control threads have been joined
[2025-10-13 12:40:34] 2025-10-13 10:40:05,466 | INFO     | all payload control threads have been joined
[2025-10-13 12:40:34] 2025-10-13 10:40:05,471 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:40:34] 2025-10-13 10:40:05,471 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:40:34] 2025-10-13 10:40:05,808 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:40:34] 2025-10-13 10:40:06,159 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:40:34] 2025-10-13 10:40:06,235 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:40:34] 2025-10-13 10:40:06,271 | INFO     | [job] control thread has finished
[2025-10-13 12:40:34] 2025-10-13 10:40:06,441 | INFO     | [job] validate thread has finished
[2025-10-13 12:40:34] 2025-10-13 10:40:06,463 | INFO     | [data] control thread has finished
[2025-10-13 12:40:34] 2025-10-13 10:40:06,471 | INFO     | [payload] control thread has finished
[2025-10-13 12:40:34] 2025-10-13 10:40:06,475 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:40:34] 2025-10-13 10:40:06,511 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:40:34] 2025-10-13 10:40:06,514 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:40:34] 2025-10-13 10:40:06,523 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:40:34] 2025-10-13 10:40:06,679 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:40:34] 2025-10-13 10:40:08,476 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:40:34] 2025-10-13 10:40:14,824 | INFO     | job.realtimelogging is not enabled
[2025-10-13 12:40:34] 2025-10-13 10:40:15,829 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:40:34] 2025-10-13 10:40:18,671 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:40:34] 2025-10-13 10:40:19,630 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139884031772480)>', '<ExcThread(monitor, started 139882789861120)>']
[2025-10-13 12:40:34] 2025-10-13 10:40:24,656 | INFO     | all workflow threads have been joined
[2025-10-13 12:40:34] 2025-10-13 10:40:24,656 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:40:34] 2025-10-13 10:40:24,656 | INFO     | traces error code: 0
[2025-10-13 12:40:34] 2025-10-13 10:40:24,656 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:40:34] 2025-10-13 10:40:34,548 | INFO     | PID=3424329 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 12:40:34] 2025-10-13 10:40:34,548 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:40:34] 2025-10-13 10:40:34,548 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:40:34] 2025-10-13 10:40:34,548 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:40:34] 2025-10-13 10:40:34,548 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:40:34] 2025-10-13 10:40:34,548 | INFO     | [monitor] control thread has ended
[2025-10-13 12:40:34] 2025-10-13 10:40:34,594 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:40:34] 2025-10-13 10:40:34,597 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:40:34] 2025-10-13 10:40:34,599 [wrapper] pilotpid: 3424329
[2025-10-13 12:40:34] 2025-10-13 10:40:34,602 [wrapper] Pilot exit status: 0
[2025-10-13 12:40:34] 2025-10-13 10:40:34,609 [wrapper] pandaids: 6840712947
[2025-10-13 12:40:34] 2025-10-13 10:40:34,626 [wrapper] cleanup supervisor_pilot 3443012 3424330
[2025-10-13 12:40:34] 2025-10-13 10:40:34,629 [wrapper] Test setup, not cleaning
[2025-10-13 12:40:34] 2025-10-13 10:40:34,631 [wrapper] apfmon messages muted
[2025-10-13 12:40:34] 2025-10-13 10:40:34,633 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:40:34] 2025-10-13 10:40:34,636 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:40:34]  *** Error codes and diagnostics ***
[2025-10-13 12:40:34]     "exeErrorCode": 0,
[2025-10-13 12:40:34]     "exeErrorDiag": "",
[2025-10-13 12:40:34]     "pilotErrorCode": 0,
[2025-10-13 12:40:34]     "pilotErrorDiag": "",
[2025-10-13 12:40:34]  *** Listing of results directory ***
[2025-10-13 12:40:34] total 401860
[2025-10-13 12:40:34] -rw-r--r-- 1 boinc boinc    557409 Oct 12 21:28 pilot3.tar.gz
[2025-10-13 12:40:34] -rwx------ 1 boinc boinc     36292 Oct 12 21:29 runpilot2-wrapper.sh
[2025-10-13 12:40:34] -rw-r--r-- 1 boinc boinc      5112 Oct 12 21:29 queuedata.json
[2025-10-13 12:40:34] -rw-r--r-- 1 boinc boinc       100 Oct 13 11:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:40:34] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 11:23 run_atlas
[2025-10-13 12:40:34] -rw-r--r-- 1 boinc boinc       105 Oct 13 11:23 job.xml
[2025-10-13 12:40:34] -rw-r--r-- 2 boinc boinc 220839248 Oct 13 11:23 EVNT.46676267._004453.pool.root.1
[2025-10-13 12:40:34] -rw-r--r-- 2 boinc boinc    569675 Oct 13 11:23 input.tar.gz
[2025-10-13 12:40:34] -rw-r--r-- 2 boinc boinc     15120 Oct 13 11:23 start_atlas.sh
[2025-10-13 12:40:34] drwxrwx--x 2 boinc boinc      4096 Oct 13 11:23 shared
[2025-10-13 12:40:34] -rw-r--r-- 1 boinc boinc         0 Oct 13 11:23 boinc_setup_complete
[2025-10-13 12:40:34] -rw-r--r-- 1 boinc boinc      6447 Oct 13 11:23 init_data.xml
[2025-10-13 12:40:34] -rw-r--r-- 1 boinc boinc         0 Oct 13 11:23 boinc_lockfile
[2025-10-13 12:40:34] -rw-r--r-- 1 boinc boinc      2550 Oct 13 11:23 pandaJob.out
[2025-10-13 12:40:34] -rw------- 1 boinc boinc    972849 Oct 13 11:23 agis_schedconf.cvmfs.json
[2025-10-13 12:40:34] -rw------- 1 boinc boinc   1560580 Oct 13 11:23 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:40:34] drwx------ 5 boinc boinc      4096 Oct 13 11:23 pilot3
[2025-10-13 12:40:34] -rw------- 1 boinc boinc        95 Oct 13 12:39 pilot_heartbeat.json
[2025-10-13 12:40:34] -rw-r--r-- 1 boinc boinc       529 Oct 13 12:39 boinc_task_state.xml
[2025-10-13 12:40:34] -rw------- 1 boinc boinc 184937934 Oct 13 12:39 HITS.46676269._087460.pool.root.1
[2025-10-13 12:40:34] -rw------- 1 boinc boinc      1014 Oct 13 12:39 memory_monitor_summary.json
[2025-10-13 12:40:34] -rw------- 1 boinc boinc    239465 Oct 13 12:39 log.46676269._087460.job.log.tgz.1
[2025-10-13 12:40:34] -rw------- 1 boinc boinc      7754 Oct 13 12:40 heartbeat.json
[2025-10-13 12:40:34] -rw-r--r-- 1 boinc boinc      8192 Oct 13 12:40 boinc_mmap_file
[2025-10-13 12:40:34] -rw-r--r-- 1 boinc boinc        27 Oct 13 12:40 wrapper_checkpoint.txt
[2025-10-13 12:40:34] -rw------- 1 boinc boinc       747 Oct 13 12:40 pilotlog.txt
[2025-10-13 12:40:34] -rw------- 1 boinc boinc    681098 Oct 13 12:40 log.46676269._087460.job.log.1
[2025-10-13 12:40:34] -rw------- 1 boinc boinc       357 Oct 13 12:40 output.list
[2025-10-13 12:40:34] -rw-r--r-- 1 boinc boinc       620 Oct 13 12:40 runtime_log
[2025-10-13 12:40:34] -rw------- 1 boinc boinc    942080 Oct 13 12:40 result.tar.gz
[2025-10-13 12:40:34] -rw-r--r-- 1 boinc boinc      8782 Oct 13 12:40 runtime_log.err
[2025-10-13 12:40:34] -rw------- 1 boinc boinc       659 Oct 13 12:40 IqxLDmwvGS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm2oUMDmoBx0Ro.diag
[2025-10-13 12:40:34] -rw-r--r-- 1 boinc boinc      8979 Oct 13 12:40 stderr.txt
[2025-10-13 12:40:34] HITS file was successfully produced:
[2025-10-13 12:40:34] -rw------- 1 boinc boinc 184937934 Oct 13 12:39 shared/HITS.pool.root.1
[2025-10-13 12:40:34]  *** Contents of shared directory: ***
[2025-10-13 12:40:34] total 397772
[2025-10-13 12:40:34] -rw-r--r-- 2 boinc boinc 220839248 Oct 13 11:23 ATLAS.root_0
[2025-10-13 12:40:34] -rw-r--r-- 2 boinc boinc    569675 Oct 13 11:23 input.tar.gz
[2025-10-13 12:40:34] -rw-r--r-- 2 boinc boinc     15120 Oct 13 11:23 start_atlas.sh
[2025-10-13 12:40:34] -rw------- 1 boinc boinc 184937934 Oct 13 12:39 HITS.pool.root.1
[2025-10-13 12:40:34] -rw------- 1 boinc boinc    942080 Oct 13 12:40 result.tar.gz
12:40:36 (3420613): run_atlas exited; CPU time 13205.615701
12:40:36 (3420613): called boinc_finish(0)

</stderr_txt>
]]>

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