Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:24:42 (3585468): wrapper (7.7.26015): starting
21:24:42 (3585468): wrapper: running run_atlas (--nthreads 10)
[2025-10-12 21:24:42] Arguments: --nthreads 10
[2025-10-12 21:24:42] Threads: 10
[2025-10-12 21:24:42] Checking for CVMFS
[2025-10-12 21:24:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:24:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:24:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:24:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:24:43] 2.13.2.0 1660786 130020 451160 151643 0 136 25318452 32935937 23720 16776704 16 254540009 99.578 282724052 22235 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 21:24:43] CVMFS is ok
[2025-10-12 21:24:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:24:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:24:43] Further information can be found at the LHC@home message board.
[2025-10-12 21:24:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:24:43] Checking for apptainer binary...
[2025-10-12 21:24:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:24:43] Running /usr/bin/apptainer --version
[2025-10-12 21:24:43] apptainer version 1.4.3-1.el9
[2025-10-12 21:24:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:24:43] c7-11-16.aglt2.org
[2025-10-12 21:24:43] apptainer works
[2025-10-12 21:24:43] Set ATHENA_PROC_NUMBER=10
[2025-10-12 21:24:43] Set ATHENA_CORE_NUMBER=10
[2025-10-12 21:24:43] Starting ATLAS job with PandaID=6840749453
[2025-10-12 21:24:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:55:30]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:55:30] 2025-10-13 03:54:23,449 | INFO     | -- intersect: 45125289021.4575
[2025-10-12 23:55:30] 2025-10-13 03:54:23,449 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6840749453/HITS.46676269._088885.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 23:55:30] 2025-10-13 03:54:23,456 | INFO     | total size of present files: 0 B (workdir size: 3639209 B)
[2025-10-12 23:55:30] 2025-10-13 03:54:23,456 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6840749453/HITS.46676269._088885.pool.root.1 since it does not exist
[2025-10-12 23:55:30] 2025-10-13 03:54:23,455 | INFO     | intersect: 45125289021.4575
[2025-10-12 23:55:30] 2025-10-13 03:54:23,457 | INFO     | chi2: 2.8419709906931456
[2025-10-12 23:55:30] 2025-10-13 03:54:23,457 | INFO     | sum of square deviations: 869185597.8014175
[2025-10-12 23:55:30] 2025-10-13 03:54:23,458 | INFO     | sum of deviations: -15292393021.170223
[2025-10-12 23:55:30] 2025-10-13 03:54:23,458 | INFO     | mean x: 1760323043.0921986
[2025-10-12 23:55:30] 2025-10-13 03:54:23,458 | INFO     | mean y: 2263061.936170213
[2025-10-12 23:55:30] 2025-10-13 03:54:23,458 | INFO     | -- intersect: 30973268434.41424
[2025-10-12 23:55:30] 2025-10-13 03:54:23,458 | INFO     | intersect: 30973268434.41424
[2025-10-12 23:55:30] 2025-10-13 03:54:23,458 | INFO     | chi2: 2.058896845720211
[2025-10-12 23:55:30] 2025-10-13 03:54:23,459 | INFO     | current chi2=2.058896845720211 (change=27.553910561977478 %)
[2025-10-12 23:55:30] 2025-10-13 03:54:23,459 | INFO     | sum of square deviations: 779959982.7573526
[2025-10-12 23:55:30] 2025-10-13 03:54:23,459 | INFO     | sum of deviations: -14384931661.588234
[2025-10-12 23:55:30] 2025-10-13 03:54:23,459 | INFO     | mean x: 1760322890.5955882
[2025-10-12 23:55:30] 2025-10-13 03:54:23,459 | INFO     | mean y: 2264616.3529411764
[2025-10-12 23:55:30] 2025-10-13 03:54:23,459 | INFO     | -- intersect: 32468192411.811096
[2025-10-12 23:55:30] 2025-10-13 03:54:23,460 | INFO     | intersect: 32468192411.811096
[2025-10-12 23:55:30] 2025-10-13 03:54:23,460 | INFO     | chi2: 2.0541514778166703
[2025-10-12 23:55:30] 2025-10-13 03:54:23,475 | INFO     | current chi2=2.0541514778166703 (change=0.2304810905609403 %)
[2025-10-12 23:55:30] 2025-10-13 03:54:23,475 | INFO     | right removable region: 135
[2025-10-12 23:55:30] 2025-10-13 03:54:23,475 | INFO     | sum of square deviations: 869177667.8014175
[2025-10-12 23:55:30] 2025-10-13 03:54:23,476 | INFO     | sum of deviations: -47258085087.89362
[2025-10-12 23:55:30] 2025-10-13 03:54:23,476 | INFO     | mean x: 1760323348.0921986
[2025-10-12 23:55:30] 2025-10-13 03:54:23,476 | INFO     | mean y: 2283847.914893617
[2025-10-12 23:55:30] 2025-10-13 03:54:23,476 | INFO     | -- intersect: 95712877490.72504
[2025-10-12 23:55:30] 2025-10-13 03:54:23,476 | INFO     | intersect: 95712877490.72504
[2025-10-12 23:55:30] 2025-10-13 03:54:23,476 | INFO     | chi2: 1.184952525759257
[2025-10-12 23:55:30] 2025-10-13 03:54:23,476 | INFO     | current chi2=1.184952525759257 (change=58.30525611838664 %)
[2025-10-12 23:55:30] 2025-10-13 03:54:23,477 | INFO     | sum of square deviations: 779970043.264704
[2025-10-12 23:55:30] 2025-10-13 03:54:23,478 | INFO     | sum of deviations: -42942311022.02941
[2025-10-12 23:55:30] 2025-10-13 03:54:23,478 | INFO     | mean x: 1760323500.5735295
[2025-10-12 23:55:30] 2025-10-13 03:54:23,478 | INFO     | mean y: 2276400.1029411764
[2025-10-12 23:55:30] 2025-10-13 03:54:23,478 | INFO     | -- intersect: 96919279705.2693
[2025-10-12 23:55:30] 2025-10-13 03:54:23,479 | INFO     | intersect: 96919279705.2693
[2025-10-12 23:55:30] 2025-10-13 03:54:23,479 | INFO     | chi2: 1.1737308601784082
[2025-10-12 23:55:30] 2025-10-13 03:54:23,479 | INFO     | current chi2=1.1737308601784082 (change=0.9470139382722136 %)
[2025-10-12 23:55:30] 2025-10-13 03:54:23,479 | INFO     | left removable region: 20
[2025-10-12 23:55:30] 2025-10-13 03:54:23,479 | INFO     | sum of square deviations: 471574173.13043594
[2025-10-12 23:55:30] 2025-10-13 03:54:23,480 | INFO     | sum of deviations: -20445792068.739136
[2025-10-12 23:55:30] 2025-10-13 03:54:23,480 | INFO     | mean x: 1760323470.0869565
[2025-10-12 23:55:30] 2025-10-13 03:54:23,480 | INFO     | mean y: 2271991.7739130436
[2025-10-12 23:55:30] 2025-10-13 03:54:23,480 | INFO     | -- intersect: 76323685872.86064
[2025-10-12 23:55:30] 2025-10-13 03:54:23,480 | INFO     | intersect: 76323685872.86064
[2025-10-12 23:55:30] 2025-10-13 03:54:23,480 | INFO     | chi2: 0.2985202047689303
[2025-10-12 23:55:30] 2025-10-13 03:54:23,480 | INFO     | -- intersect: 76323685872.86064
[2025-10-12 23:55:30] 2025-10-13 03:54:23,480 | INFO     | current memory leak: -43.36 B/s (using 115 data points, chi2=0.30)
[2025-10-12 23:55:30] 2025-10-13 03:54:23,481 | INFO     | could have reported an average CPU frequency of 3285 MHz (8 samples)
[2025-10-12 23:55:30] 2025-10-13 03:54:23,481 | INFO     | ..............................
[2025-10-12 23:55:30] 2025-10-13 03:54:23,481 | INFO     | . Timing measurements:
[2025-10-12 23:55:30] 2025-10-13 03:54:23,481 | INFO     | . get job = 0 s
[2025-10-12 23:55:30] 2025-10-13 03:54:23,481 | INFO     | . initial setup = 3 s
[2025-10-12 23:55:30] 2025-10-13 03:54:23,481 | INFO     | . payload setup = 18 s
[2025-10-12 23:55:30] 2025-10-13 03:54:23,481 | INFO     | . stage-in = 0 s
[2025-10-12 23:55:30] 2025-10-13 03:54:23,481 | INFO     | . payload execution = 8887 s
[2025-10-12 23:55:30] 2025-10-13 03:54:23,481 | INFO     | . stage-out = 0 s
[2025-10-12 23:55:30] 2025-10-13 03:54:23,481 | INFO     | . log creation = 0 s
[2025-10-12 23:55:30] 2025-10-13 03:54:23,481 | INFO     | ..............................
[2025-10-12 23:55:30] 2025-10-13 03:54:23,608 | INFO     | 
[2025-10-12 23:55:30] 2025-10-13 03:54:23,608 | INFO     | job summary report
[2025-10-12 23:55:30] 2025-10-13 03:54:23,608 | INFO     | --------------------------------------------------
[2025-10-12 23:55:30] 2025-10-13 03:54:23,609 | INFO     | PanDA job id: 6840749453
[2025-10-12 23:55:30] 2025-10-13 03:54:23,609 | INFO     | task id: 46676269
[2025-10-12 23:55:30] 2025-10-13 03:54:23,609 | INFO     | errors: (none)
[2025-10-12 23:55:30] 2025-10-13 03:54:23,609 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:55:30] 2025-10-13 03:54:23,609 | INFO     | pilot state: finished 
[2025-10-12 23:55:30] 2025-10-13 03:54:23,609 | INFO     | transexitcode: 0
[2025-10-12 23:55:30] 2025-10-13 03:54:23,609 | INFO     | exeerrorcode: 0
[2025-10-12 23:55:30] 2025-10-13 03:54:23,609 | INFO     | exeerrordiag: 
[2025-10-12 23:55:30] 2025-10-13 03:54:23,609 | INFO     | exitcode: 0
[2025-10-12 23:55:30] 2025-10-13 03:54:23,609 | INFO     | exitmsg: OK
[2025-10-12 23:55:30] 2025-10-13 03:54:23,609 | INFO     | cpuconsumptiontime: 30899 s
[2025-10-12 23:55:30] 2025-10-13 03:54:23,610 | INFO     | nevents: 400
[2025-10-12 23:55:30] 2025-10-13 03:54:23,610 | INFO     | neventsw: 0
[2025-10-12 23:55:30] 2025-10-13 03:54:23,610 | INFO     | pid: 3601843
[2025-10-12 23:55:30] 2025-10-13 03:54:23,610 | INFO     | pgrp: 3601843
[2025-10-12 23:55:30] 2025-10-13 03:54:23,610 | INFO     | corecount: 10
[2025-10-12 23:55:30] 2025-10-13 03:54:23,610 | INFO     | event service: False
[2025-10-12 23:55:30] 2025-10-13 03:54:23,610 | INFO     | sizes: {0: 2348684, 1: 2348883, 11: 2348883, 13: 2349173, 22: 2349229, 8909: 2377765, 8910: 2386763, 8913: 2386819, 8920: 2387041}
[2025-10-12 23:55:30] 2025-10-13 03:54:23,610 | INFO     | --------------------------------------------------
[2025-10-12 23:55:30] 2025-10-13 03:54:23,610 | INFO     | 
[2025-10-12 23:55:30] 2025-10-13 03:54:23,611 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 23:55:30] 2025-10-13 03:54:23,642 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:55:30] 2025-10-13 03:54:23,642 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:55:30] 2025-10-13 03:54:23,642 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:55:30] 2025-10-13 03:54:23,643 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:55:30] 2025-10-13 03:54:23,643 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:55:30] 2025-10-13 03:54:23,643 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:55:30] 2025-10-13 03:54:23,643 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:55:30] 2025-10-13 03:54:23,643 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:55:30] 2025-10-13 03:54:23,643 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:55:30] 2025-10-13 03:54:23,643 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:55:30] 2025-10-13 03:54:23,643 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:55:30] 2025-10-13 03:54:23,643 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:55:30] 2025-10-13 03:54:23,643 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:55:30] 2025-10-13 03:54:23,643 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:55:30] 2025-10-13 03:54:23,643 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:55:30] 2025-10-13 03:54:23,644 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:55:30] 2025-10-13 03:54:23,644 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:55:30] 2025-10-13 03:54:23,644 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:55:30] 2025-10-13 03:54:23,644 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:55:30] 2025-10-13 03:54:23,644 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:55:30] 2025-10-13 03:54:23,644 | INFO     | job 6840749453 has completed (purged errors)
[2025-10-12 23:55:30] 2025-10-13 03:54:23,644 | INFO     | overall cleanup function is called
[2025-10-12 23:55:30] 2025-10-13 03:54:23,938 | INFO     | number of running child processes to parent process 3601843: 1
[2025-10-12 23:55:30] 2025-10-13 03:54:23,938 | INFO     | maximum number of monitored processes: 6
[2025-10-12 23:55:30] 2025-10-13 03:54:23,938 | INFO     | aborting job monitoring since job object (job id=6840749453) has expired
[2025-10-12 23:55:30] 2025-10-13 03:54:24,654 | INFO     | --- collectZombieJob: --- 10, [3601843]
[2025-10-12 23:55:30] 2025-10-13 03:54:24,654 | INFO     | zombie collector waiting for pid 3601843
[2025-10-12 23:55:30] 2025-10-13 03:54:24,654 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:55:30] 2025-10-13 03:54:24,654 | INFO     | collected zombie processes
[2025-10-12 23:55:30] 2025-10-13 03:54:24,654 | INFO     | will attempt to kill all subprocesses of pid=3601843
[2025-10-12 23:55:30] 2025-10-13 03:54:25,000 | INFO     | process IDs to be killed: [3601843] (in reverse order)
[2025-10-12 23:55:30] 2025-10-13 03:54:25,155 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:55:30] 2025-10-13 03:54:25,155 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:55:30] 2025-10-13 03:54:25,175 | INFO     | did not find any defunct processes belonging to 3601843
[2025-10-12 23:55:30] 2025-10-13 03:54:25,193 | INFO     | did not find any defunct processes belonging to 3601843
[2025-10-12 23:55:30] 2025-10-13 03:54:25,193 | INFO     | ready for new job
[2025-10-12 23:55:30] 2025-10-13 03:54:25,193 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:55:30] 2025-10-13 03:54:25,195 | INFO     | ***************************************
[2025-10-12 23:55:30] 2025-10-13 03:54:25,195 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:55:30] 2025-10-13 03:54:25,195 | INFO     | ***************************************
[2025-10-12 23:55:30] 2025-10-13 03:54:25,195 | INFO     | 
[2025-10-12 23:55:30] 2025-10-13 03:54:25,214 | INFO     | architecture information:
[2025-10-12 23:55:30] 2025-10-13 03:54:25,215 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:55:30] 2025-10-13 03:54:25,232 | INFO     | cat /etc/os-release:
[2025-10-12 23:55:30] NAME="CentOS Linux"
[2025-10-12 23:55:30] VERSION="7 (Core)"
[2025-10-12 23:55:30] ID="centos"
[2025-10-12 23:55:30] ID_LIKE="rhel fedora"
[2025-10-12 23:55:30] VERSION_ID="7"
[2025-10-12 23:55:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:55:30] ANSI_COLOR="0;31"
[2025-10-12 23:55:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:55:30] HOME_URL="https://www.centos.org/"
[2025-10-12 23:55:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:55:30] 
[2025-10-12 23:55:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:55:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:55:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:55:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:55:30] 
[2025-10-12 23:55:30] 2025-10-13 03:54:25,232 | INFO     | ***************************************
[2025-10-12 23:55:30] 2025-10-13 03:54:25,735 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 23:55:30] 2025-10-13 03:54:25,753 | INFO     | sufficient remaining disk space (95322898432 B)
[2025-10-12 23:55:30] 2025-10-13 03:54:25,754 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:55:30] 2025-10-13 03:54:25,754 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:55:30] 2025-10-13 03:54:25,754 | INFO     | update_server=False
[2025-10-12 23:55:30] 2025-10-13 03:54:25,754 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:55:30] 2025-10-13 03:54:25,754 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:55:30] 2025-10-13 03:54:25,754 | INFO     | aborting loop
[2025-10-12 23:55:30] 2025-10-13 03:54:25,986 | INFO     | all data control threads have been joined
[2025-10-12 23:55:30] 2025-10-13 03:54:26,570 | INFO     | all job control threads have been joined
[2025-10-12 23:55:30] 2025-10-13 03:54:26,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:55:30] 2025-10-13 03:54:26,760 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:55:30] 2025-10-13 03:54:26,760 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:55:30] 2025-10-13 03:54:26,788 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:55:30] 2025-10-13 03:54:26,962 | INFO     | [job] validate thread has finished
[2025-10-12 23:55:30] 2025-10-13 03:54:26,992 | INFO     | [data] control thread has finished
[2025-10-12 23:55:30] 2025-10-13 03:54:27,026 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:55:30] 2025-10-13 03:54:27,245 | INFO     | all payload control threads have been joined
[2025-10-12 23:55:30] 2025-10-13 03:54:27,387 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:55:30] 2025-10-13 03:54:27,486 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:55:30] 2025-10-13 03:54:27,575 | INFO     | [job] control thread has finished
[2025-10-12 23:55:30] 2025-10-13 03:54:27,707 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:55:30] 2025-10-13 03:54:27,830 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:55:30] 2025-10-13 03:54:28,250 | INFO     | [payload] control thread has finished
[2025-10-12 23:55:30] 2025-10-13 03:54:28,255 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:55:30] 2025-10-13 03:54:28,588 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:55:30] 2025-10-13 03:54:28,710 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:55:30] 2025-10-13 03:54:29,594 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:55:30] 2025-10-13 03:54:31,512 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:55:30] 2025-10-13 03:54:36,036 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:55:30] 2025-10-13 03:54:37,041 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:55:30] 2025-10-13 03:54:55,888 | INFO     | PID=3594548 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:55:30] 2025-10-13 03:54:55,890 | INFO     | .. there are 30 such processes running
[2025-10-12 23:55:30] 2025-10-13 03:54:55,890 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:55:30] 2025-10-13 03:54:55,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:55:30] 2025-10-13 03:54:55,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:55:30] 2025-10-13 03:55:06,955 [wrapper] supervise_pilot (15 min periods counter: 11)
[2025-10-12 23:55:30] 2025-10-13 03:55:23,945 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:55:30] 2025-10-13 03:55:25,142 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140318912767808)>', '<ExcThread(monitor, started 140318569645824)>']
[2025-10-12 23:55:30] 2025-10-13 03:55:26,104 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:55:30] 2025-10-13 03:55:26,104 | INFO     | [monitor] control thread has ended
[2025-10-12 23:55:30] 2025-10-13 03:55:30,168 | INFO     | all workflow threads have been joined
[2025-10-12 23:55:30] 2025-10-13 03:55:30,168 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:55:30] 2025-10-13 03:55:30,168 | INFO     | traces error code: 0
[2025-10-12 23:55:30] 2025-10-13 03:55:30,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:55:30] 2025-10-13 03:55:30,328 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:55:30] 2025-10-13 03:55:30,332 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:55:30] 2025-10-13 03:55:30,335 [wrapper] pilotpid: 3594548
[2025-10-12 23:55:30] 2025-10-13 03:55:30,338 [wrapper] Pilot exit status: 0
[2025-10-12 23:55:30] 2025-10-13 03:55:30,359 [wrapper] pandaids: 6840749453
[2025-10-12 23:55:30] 2025-10-13 03:55:30,474 [wrapper] cleanup supervisor_pilot   62279 3594549
[2025-10-12 23:55:30] 2025-10-13 03:55:30,477 [wrapper] Test setup, not cleaning
[2025-10-12 23:55:30] 2025-10-13 03:55:30,480 [wrapper] apfmon messages muted
[2025-10-12 23:55:30] 2025-10-13 03:55:30,490 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:55:30] 2025-10-13 03:55:30,493 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:55:30]  *** Error codes and diagnostics ***
[2025-10-12 23:55:30]     "exeErrorCode": 0,
[2025-10-12 23:55:30]     "exeErrorDiag": "",
[2025-10-12 23:55:30]     "pilotErrorCode": 0,
[2025-10-12 23:55:30]     "pilotErrorDiag": "",
[2025-10-12 23:55:30]  *** Listing of results directory ***
[2025-10-12 23:55:30] total 404808
[2025-10-12 23:55:30] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 16:23 pilot3.tar.gz
[2025-10-12 23:55:30] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:38 queuedata.json
[2025-10-12 23:55:30] -rwx------. 1 boincer umatlas     36292 Oct 12 16:38 runpilot2-wrapper.sh
[2025-10-12 23:55:30] -rw-r--r--. 1 boincer umatlas       100 Oct 12 21:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:55:30] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 21:24 run_atlas
[2025-10-12 23:55:30] -rw-r--r--. 1 boincer umatlas       105 Oct 12 21:24 job.xml
[2025-10-12 23:55:30] -rw-r--r--. 2 boincer umatlas 220219100 Oct 12 21:24 EVNT.46676267._004855.pool.root.1
[2025-10-12 23:55:30] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 21:24 shared
[2025-10-12 23:55:30] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 21:24 input.tar.gz
[2025-10-12 23:55:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 21:24 start_atlas.sh
[2025-10-12 23:55:30] -rw-r--r--. 1 boincer umatlas         0 Oct 12 21:24 boinc_lockfile
[2025-10-12 23:55:30] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 21:24 pandaJob.out
[2025-10-12 23:55:30] -rw-------. 1 boincer umatlas    975595 Oct 12 21:25 agis_schedconf.cvmfs.json
[2025-10-12 23:55:30] -rw-------. 1 boincer umatlas   1560580 Oct 12 21:25 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:55:30] drwx------. 5 boincer umatlas      4096 Oct 12 21:25 pilot3
[2025-10-12 23:55:30] -rw-------. 1 boincer umatlas 187097285 Oct 12 23:53 HITS.46676269._088885.pool.root.1
[2025-10-12 23:55:30] -rw-r--r--. 1 boincer umatlas       529 Oct 12 23:53 boinc_task_state.xml
[2025-10-12 23:55:30] -rw-------. 1 boincer umatlas      1033 Oct 12 23:54 memory_monitor_summary.json
[2025-10-12 23:55:30] -rw-------. 1 boincer umatlas    409456 Oct 12 23:54 log.46676269._088885.job.log.tgz.1
[2025-10-12 23:55:30] -rw-------. 1 boincer umatlas        95 Oct 12 23:54 pilot_heartbeat.json
[2025-10-12 23:55:30] -rw-------. 1 boincer umatlas      7778 Oct 12 23:54 heartbeat.json
[2025-10-12 23:55:30] -rw-r--r--. 1 boincer umatlas      6899 Oct 12 23:54 init_data.xml
[2025-10-12 23:55:30] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:55 boinc_mmap_file
[2025-10-12 23:55:30] -rw-r--r--. 1 boincer umatlas        27 Oct 12 23:55 wrapper_checkpoint.txt
[2025-10-12 23:55:30] -rw-------. 1 boincer umatlas      4896 Oct 12 23:55 pilotlog.txt
[2025-10-12 23:55:30] -rw-------. 1 boincer umatlas   1242245 Oct 12 23:55 log.46676269._088885.job.log.1
[2025-10-12 23:55:30] -rw-------. 1 boincer umatlas       357 Oct 12 23:55 output.list
[2025-10-12 23:55:30] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:55 runtime_log
[2025-10-12 23:55:30] -rw-------. 1 boincer umatlas   1669120 Oct 12 23:55 result.tar.gz
[2025-10-12 23:55:30] -rw-r--r--. 1 boincer umatlas      8705 Oct 12 23:55 runtime_log.err
[2025-10-12 23:55:30] -rw-------. 1 boincer umatlas       652 Oct 12 23:55 5h6MDmh0HS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmxyUMDmM8Watm.diag
[2025-10-12 23:55:30] -rw-r--r--. 1 boincer umatlas     21312 Oct 12 23:55 stderr.txt
[2025-10-12 23:55:30] HITS file was successfully produced:
[2025-10-12 23:55:30] -rw-------. 1 boincer umatlas 187097285 Oct 12 23:53 shared/HITS.pool.root.1
[2025-10-12 23:55:30]  *** Contents of shared directory: ***
[2025-10-12 23:55:30] total 399988
[2025-10-12 23:55:30] -rw-r--r--. 2 boincer umatlas 220219100 Oct 12 21:24 ATLAS.root_0
[2025-10-12 23:55:30] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 21:24 input.tar.gz
[2025-10-12 23:55:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 21:24 start_atlas.sh
[2025-10-12 23:55:30] -rw-------. 1 boincer umatlas 187097285 Oct 12 23:53 HITS.pool.root.1
[2025-10-12 23:55:30] -rw-------. 1 boincer umatlas   1669120 Oct 12 23:55 result.tar.gz
23:55:32 (3585468): run_atlas exited; CPU time 30950.382466
23:55:32 (3585468): called boinc_finish(0)

</stderr_txt>
]]>

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