Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:18:46 (4087): wrapper (7.7.26015): starting
02:18:46 (4087): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 02:18:46] Arguments: --nthreads 4
[2025-10-13 02:18:46] Threads: 4
[2025-10-13 02:18:46] Checking for CVMFS
[2025-10-13 02:18:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:18:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:18:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:18:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:18:56] 2.11.5.0 4309 0 25148 151643 3 1 3051549 4194304 0 130560 0 0 0.000 1291 507 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2025-10-13 02:18:56] CVMFS is ok
[2025-10-13 02:18:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:18:56] Checking for apptainer binary...
[2025-10-13 02:18:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:18:56] Running /usr/bin/apptainer --version
[2025-10-13 02:18:57] apptainer version 1.0.3
[2025-10-13 02:18:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:18:58] TeeC22
[2025-10-13 02:18:58] apptainer works
[2025-10-13 02:18:58] Set ATHENA_PROC_NUMBER=4
[2025-10-13 02:18:58] Set ATHENA_CORE_NUMBER=4
[2025-10-13 02:18:58] Starting ATLAS job with PandaID=6840852579
[2025-10-13 02:18:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:30:17]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:30:17] 2025-10-13 04:29:42,964 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:30:17] 2025-10-13 04:29:43,358 | INFO     | PID=8401 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 05:30:17] 2025-10-13 04:29:44,358 | INFO     | time since job start (11407s) is within the limit (172800.0s)
[2025-10-13 05:30:17] 2025-10-13 04:29:45,401 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 05:30:17] 2025-10-13 04:29:45,402 | INFO     | found 2 cores (2 cores per socket, 1 socket) HT, CPU MHz: 3408.5119999999997
[2025-10-13 05:30:17] 2025-10-13 04:29:45,402 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-6840852579/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:30:17] 2025-10-13 04:29:45,403 | INFO     | extracted standard info from prmon json
[2025-10-13 05:30:17] 2025-10-13 04:29:45,403 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 05:30:17] 2025-10-13 04:29:45,403 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:30:17] 2025-10-13 04:29:45,403 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:30:17] 2025-10-13 04:29:45,403 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:30:17] 2025-10-13 04:29:45,405 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:30:17] 2025-10-13 04:29:45,405 | INFO     | sum of square deviations: 1963274020.0
[2025-10-13 05:30:17] 2025-10-13 04:29:45,405 | INFO     | sum of deviations: -39162896516.99998
[2025-10-13 05:30:17] 2025-10-13 04:29:45,405 | INFO     | mean x: 1760324010.0
[2025-10-13 05:30:17] 2025-10-13 04:29:45,405 | INFO     | mean y: 2424285.0324324323
[2025-10-13 05:30:17] 2025-10-13 04:29:45,405 | INFO     | -- intersect: 35116925031.09763
[2025-10-13 05:30:17] 2025-10-13 04:29:45,405 | INFO     | intersect: 35116925031.09763
[2025-10-13 05:30:17] 2025-10-13 04:29:45,406 | INFO     | chi2: 2.1452620865804315
[2025-10-13 05:30:17] 2025-10-13 04:29:45,406 | INFO     | sum of square deviations: 1808350185.0
[2025-10-13 05:30:17] 2025-10-13 04:29:45,406 | INFO     | sum of deviations: -37396681227.99999
[2025-10-13 05:30:17] 2025-10-13 04:29:45,406 | INFO     | mean x: 1760323857.5
[2025-10-13 05:30:17] 2025-10-13 04:29:45,406 | INFO     | mean y: 2426024.033333333
[2025-10-13 05:30:17] 2025-10-13 04:29:45,406 | INFO     | -- intersect: 36405922815.209755
[2025-10-13 05:30:17] 2025-10-13 04:29:45,406 | INFO     | intersect: 36405922815.209755
[2025-10-13 05:30:17] 2025-10-13 04:29:45,407 | INFO     | chi2: 2.1391834974529114
[2025-10-13 05:30:17] 2025-10-13 04:29:45,407 | INFO     | current chi2=2.1391834974529114 (change=0.2833494874842756 %)
[2025-10-13 05:30:17] 2025-10-13 04:29:45,407 | INFO     | right removable region: 179
[2025-10-13 05:30:17] 2025-10-13 04:29:45,407 | INFO     | sum of square deviations: 1808350185.0
[2025-10-13 05:30:17] 2025-10-13 04:29:45,407 | INFO     | sum of deviations: -69784339525.99998
[2025-10-13 05:30:17] 2025-10-13 04:29:45,407 | INFO     | mean x: 1760324162.5
[2025-10-13 05:30:17] 2025-10-13 04:29:45,407 | INFO     | mean y: 2454111.144444444
[2025-10-13 05:30:17] 2025-10-13 04:29:45,407 | INFO     | -- intersect: 67933466616.73477
[2025-10-13 05:30:17] 2025-10-13 04:29:45,407 | INFO     | intersect: 67933466616.73477
[2025-10-13 05:30:17] 2025-10-13 04:29:45,408 | INFO     | chi2: 0.4200821841608547
[2025-10-13 05:30:17] 2025-10-13 04:29:45,408 | INFO     | current chi2=0.4200821841608547 (change=80.41814159730619 %)
[2025-10-13 05:30:17] 2025-10-13 04:29:45,408 | INFO     | sum of square deviations: 1661798600.0
[2025-10-13 05:30:17] 2025-10-13 04:29:45,408 | INFO     | sum of deviations: -63126337938.99999
[2025-10-13 05:30:17] 2025-10-13 04:29:45,408 | INFO     | mean x: 1760324315.0
[2025-10-13 05:30:17] 2025-10-13 04:29:45,408 | INFO     | mean y: 2447161.4685714287
[2025-10-13 05:30:17] 2025-10-13 04:29:45,408 | INFO     | -- intersect: 66871457395.87885
[2025-10-13 05:30:17] 2025-10-13 04:29:45,408 | INFO     | intersect: 66871457395.87885
[2025-10-13 05:30:17] 2025-10-13 04:29:45,408 | INFO     | chi2: 0.4164818200981535
[2025-10-13 05:30:17] 2025-10-13 04:29:45,409 | INFO     | current chi2=0.4164818200981535 (change=0.8570618318158849 %)
[2025-10-13 05:30:17] 2025-10-13 04:29:45,409 | INFO     | left removable region: 20
[2025-10-13 05:30:17] 2025-10-13 04:29:45,409 | INFO     | sum of square deviations: 1246386160.0
[2025-10-13 05:30:17] 2025-10-13 04:29:45,409 | INFO     | sum of deviations: -44519843561.00001
[2025-10-13 05:30:17] 2025-10-13 04:29:45,409 | INFO     | mean x: 1760324437.0
[2025-10-13 05:30:17] 2025-10-13 04:29:45,409 | INFO     | mean y: 2430816.9182389937
[2025-10-13 05:30:17] 2025-10-13 04:29:45,409 | INFO     | -- intersect: 62879708395.03689
[2025-10-13 05:30:17] 2025-10-13 04:29:45,409 | INFO     | intersect: 62879708395.03689
[2025-10-13 05:30:17] 2025-10-13 04:29:45,409 | INFO     | chi2: 0.3796764505600576
[2025-10-13 05:30:17] 2025-10-13 04:29:45,409 | INFO     | -- intersect: 62879708395.03689
[2025-10-13 05:30:17] 2025-10-13 04:29:45,409 | INFO     | current memory leak: -35.72 B/s (using 159 data points, chi2=0.38)
[2025-10-13 05:30:17] 2025-10-13 04:29:45,410 | INFO     | could have reported an average CPU frequency of 3179 MHz (10 samples)
[2025-10-13 05:30:17] 2025-10-13 04:29:45,410 | INFO     | ..............................
[2025-10-13 05:30:17] 2025-10-13 04:29:45,410 | INFO     | . Timing measurements:
[2025-10-13 05:30:17] 2025-10-13 04:29:45,410 | INFO     | . get job = 0 s
[2025-10-13 05:30:17] 2025-10-13 04:29:45,410 | INFO     | . initial setup = 19 s
[2025-10-13 05:30:17] 2025-10-13 04:29:45,410 | INFO     | . payload setup = 5 s
[2025-10-13 05:30:17] 2025-10-13 04:29:45,410 | INFO     | . stage-in = 0 s
[2025-10-13 05:30:17] 2025-10-13 04:29:45,410 | INFO     | . payload execution = 11261 s
[2025-10-13 05:30:17] 2025-10-13 04:29:45,410 | INFO     | . stage-out = 72 s
[2025-10-13 05:30:17] 2025-10-13 04:29:45,410 | INFO     | . log creation = 0 s
[2025-10-13 05:30:17] 2025-10-13 04:29:45,410 | INFO     | ..............................
[2025-10-13 05:30:17] 2025-10-13 04:29:45,452 | INFO     | 
[2025-10-13 05:30:17] 2025-10-13 04:29:45,452 | INFO     | job summary report
[2025-10-13 05:30:17] 2025-10-13 04:29:45,452 | INFO     | --------------------------------------------------
[2025-10-13 05:30:17] 2025-10-13 04:29:45,452 | INFO     | PanDA job id: 6840852579
[2025-10-13 05:30:17] 2025-10-13 04:29:45,452 | INFO     | task id: 46676269
[2025-10-13 05:30:17] 2025-10-13 04:29:45,452 | INFO     | errors: (none)
[2025-10-13 05:30:17] 2025-10-13 04:29:45,453 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:30:17] 2025-10-13 04:29:45,453 | INFO     | pilot state: finished 
[2025-10-13 05:30:17] 2025-10-13 04:29:45,453 | INFO     | transexitcode: 0
[2025-10-13 05:30:17] 2025-10-13 04:29:45,453 | INFO     | exeerrorcode: 0
[2025-10-13 05:30:17] 2025-10-13 04:29:45,453 | INFO     | exeerrordiag: 
[2025-10-13 05:30:17] 2025-10-13 04:29:45,453 | INFO     | exitcode: 0
[2025-10-13 05:30:17] 2025-10-13 04:29:45,453 | INFO     | exitmsg: OK
[2025-10-13 05:30:17] 2025-10-13 04:29:45,453 | INFO     | cpuconsumptiontime: 43427 s
[2025-10-13 05:30:17] 2025-10-13 04:29:45,453 | INFO     | nevents: 400
[2025-10-13 05:30:17] 2025-10-13 04:29:45,453 | INFO     | neventsw: 0
[2025-10-13 05:30:17] 2025-10-13 04:29:45,453 | INFO     | pid: 14766
[2025-10-13 05:30:17] 2025-10-13 04:29:45,453 | INFO     | pgrp: 14766
[2025-10-13 05:30:17] 2025-10-13 04:29:45,453 | INFO     | corecount: 4
[2025-10-13 05:30:17] 2025-10-13 04:29:45,453 | INFO     | event service: False
[2025-10-13 05:30:17] 2025-10-13 04:29:45,453 | INFO     | sizes: {0: 2348684, 1: 2348883, 3: 2349145, 11: 2349173, 11270: 2378458, 11343: 2387454, 11345: 2387638, 11395: 2387832}
[2025-10-13 05:30:17] 2025-10-13 04:29:45,453 | INFO     | --------------------------------------------------
[2025-10-13 05:30:17] 2025-10-13 04:29:45,453 | INFO     | 
[2025-10-13 05:30:17] 2025-10-13 04:29:45,453 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2025-10-13 05:30:17] 2025-10-13 04:29:45,460 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:30:17] 2025-10-13 04:29:45,460 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:30:17] 2025-10-13 04:29:45,460 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:30:17] 2025-10-13 04:29:45,461 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:30:17] 2025-10-13 04:29:45,461 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:30:17] 2025-10-13 04:29:45,461 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:30:17] 2025-10-13 04:29:45,461 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:30:17] 2025-10-13 04:29:45,461 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:30:17] 2025-10-13 04:29:45,461 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:30:17] 2025-10-13 04:29:45,461 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:30:17] 2025-10-13 04:29:45,461 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:30:17] 2025-10-13 04:29:45,461 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:30:17] 2025-10-13 04:29:45,461 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:30:17] 2025-10-13 04:29:45,461 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:30:17] 2025-10-13 04:29:45,461 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:30:17] 2025-10-13 04:29:45,461 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:30:17] 2025-10-13 04:29:45,461 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:30:17] 2025-10-13 04:29:45,461 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:30:17] 2025-10-13 04:29:45,461 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:30:17] 2025-10-13 04:29:45,461 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:30:17] 2025-10-13 04:29:45,461 | INFO     | job 6840852579 has completed (purged errors)
[2025-10-13 05:30:17] 2025-10-13 04:29:45,461 | INFO     | overall cleanup function is called
[2025-10-13 05:30:17] 2025-10-13 04:29:46,464 | INFO     | --- collectZombieJob: --- 10, [14766]
[2025-10-13 05:30:17] 2025-10-13 04:29:46,464 | INFO     | zombie collector waiting for pid 14766
[2025-10-13 05:30:17] 2025-10-13 04:29:46,464 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:30:17] 2025-10-13 04:29:46,465 | INFO     | collected zombie processes
[2025-10-13 05:30:17] 2025-10-13 04:29:46,465 | INFO     | will attempt to kill all subprocesses of pid=14766
[2025-10-13 05:30:17] 2025-10-13 04:29:46,516 | INFO     | process IDs to be killed: [14766] (in reverse order)
[2025-10-13 05:30:17] 2025-10-13 04:29:46,535 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:30:17] 2025-10-13 04:29:46,535 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:30:17] 2025-10-13 04:29:46,536 | INFO     | did not find any defunct processes belonging to 14766
[2025-10-13 05:30:17] 2025-10-13 04:29:46,537 | INFO     | did not find any defunct processes belonging to 14766
[2025-10-13 05:30:17] 2025-10-13 04:29:46,537 | INFO     | ready for new job
[2025-10-13 05:30:17] 2025-10-13 04:29:46,537 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:30:17] 2025-10-13 04:29:46,538 | INFO     | ***************************************
[2025-10-13 05:30:17] 2025-10-13 04:29:46,538 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:30:17] 2025-10-13 04:29:46,539 | INFO     | ***************************************
[2025-10-13 05:30:17] 2025-10-13 04:29:46,539 | INFO     | 
[2025-10-13 05:30:17] 2025-10-13 04:29:46,559 | INFO     | architecture information:
[2025-10-13 05:30:17] 2025-10-13 04:29:46,559 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:30:17] 2025-10-13 04:29:46,567 | INFO     | cat /etc/os-release:
[2025-10-13 05:30:17] NAME="CentOS Linux"
[2025-10-13 05:30:17] VERSION="7 (Core)"
[2025-10-13 05:30:17] ID="centos"
[2025-10-13 05:30:17] ID_LIKE="rhel fedora"
[2025-10-13 05:30:17] VERSION_ID="7"
[2025-10-13 05:30:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:30:17] ANSI_COLOR="0;31"
[2025-10-13 05:30:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:30:17] HOME_URL="https://www.centos.org/"
[2025-10-13 05:30:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:30:17] 
[2025-10-13 05:30:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:30:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:30:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:30:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:30:17] 
[2025-10-13 05:30:17] 2025-10-13 04:29:46,568 | INFO     | ***************************************
[2025-10-13 05:30:17] 2025-10-13 04:29:47,071 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2025-10-13 05:30:17] 2025-10-13 04:29:47,085 | INFO     | sufficient remaining disk space (416808960000 B)
[2025-10-13 05:30:17] 2025-10-13 04:29:47,086 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:30:17] 2025-10-13 04:29:47,086 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:30:17] 2025-10-13 04:29:47,086 | INFO     | update_server=False
[2025-10-13 05:30:17] 2025-10-13 04:29:47,086 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:30:17] 2025-10-13 04:29:47,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:30:17] 2025-10-13 04:29:47,086 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:30:17] 2025-10-13 04:29:47,086 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:30:17] 2025-10-13 04:29:47,087 | INFO     | aborting loop
[2025-10-13 05:30:17] 2025-10-13 04:29:47,341 | INFO     | all data control threads have been joined
[2025-10-13 05:30:17] 2025-10-13 04:29:48,091 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:30:17] 2025-10-13 04:29:48,092 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:30:17] 2025-10-13 04:29:48,093 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:30:17] 2025-10-13 04:29:48,159 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:30:17] 2025-10-13 04:29:48,246 | INFO     | all job control threads have been joined
[2025-10-13 05:30:17] 2025-10-13 04:29:48,347 | INFO     | [data] control thread has finished
[2025-10-13 05:30:17] 2025-10-13 04:29:48,402 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:30:17] 2025-10-13 04:29:48,558 | INFO     | all payload control threads have been joined
[2025-10-13 05:30:17] 2025-10-13 04:29:48,807 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:30:17] 2025-10-13 04:29:49,092 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:30:17] 2025-10-13 04:29:49,160 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:30:17] 2025-10-13 04:29:49,164 | INFO     | [job] validate thread has finished
[2025-10-13 05:30:17] 2025-10-13 04:29:49,167 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:30:17] 2025-10-13 04:29:49,251 | INFO     | [job] control thread has finished
[2025-10-13 05:30:17] 2025-10-13 04:29:49,273 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:30:17] 2025-10-13 04:29:49,387 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:30:17] 2025-10-13 04:29:49,563 | INFO     | [payload] control thread has finished
[2025-10-13 05:30:17] 2025-10-13 04:29:50,378 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:30:17] 2025-10-13 04:29:54,384 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:30:17] 2025-10-13 04:29:55,771 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:30:17] 2025-10-13 04:29:56,854 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140644677338944)>', '<ExcThread(monitor, started 140644358002432)>']
[2025-10-13 05:30:17] 2025-10-13 04:30:01,880 | INFO     | all workflow threads have been joined
[2025-10-13 05:30:17] 2025-10-13 04:30:01,880 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:30:17] 2025-10-13 04:30:01,881 | INFO     | traces error code: 0
[2025-10-13 05:30:17] 2025-10-13 04:30:01,881 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:30:17] 2025-10-13 04:30:17,503 | INFO     | PID=8401 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 05:30:17] 2025-10-13 04:30:17,503 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:30:17] 2025-10-13 04:30:17,503 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:30:17] 2025-10-13 04:30:17,503 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:30:17] 2025-10-13 04:30:17,503 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:30:17] 2025-10-13 04:30:17,503 | CRITICAL | thread 'MainThread' is not alive
[2025-10-13 05:30:17] 2025-10-13 04:30:17,504 | INFO     | [monitor] control thread has ended
[2025-10-13 05:30:17] 2025-10-13 04:30:17,583 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:30:17] 2025-10-13 04:30:17,585 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:30:17] 2025-10-13 04:30:17,586 [wrapper] pilotpid: 8401
[2025-10-13 05:30:17] 2025-10-13 04:30:17,587 [wrapper] Pilot exit status: 0
[2025-10-13 05:30:17] 2025-10-13 04:30:17,592 [wrapper] pandaids: 6840852579
[2025-10-13 05:30:17] 2025-10-13 04:30:17,602 [wrapper] cleanup supervisor_pilot  1770 8402
[2025-10-13 05:30:17] 2025-10-13 04:30:17,603 [wrapper] Test setup, not cleaning
[2025-10-13 05:30:17] 2025-10-13 04:30:17,605 [wrapper] apfmon messages muted
[2025-10-13 05:30:17] 2025-10-13 04:30:17,606 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:30:17] 2025-10-13 04:30:17,607 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:30:17]  *** Error codes and diagnostics ***
[2025-10-13 05:30:17]     "exeErrorCode": 0,
[2025-10-13 05:30:17]     "exeErrorDiag": "",
[2025-10-13 05:30:17]     "pilotErrorCode": 0,
[2025-10-13 05:30:17]     "pilotErrorDiag": "",
[2025-10-13 05:30:17]  *** Listing of results directory ***
[2025-10-13 05:30:17] total 416616
[2025-10-13 05:30:17] -rw-r--r-- 1 m m    557409 Oct 12 22:57 pilot3.tar.gz
[2025-10-13 05:30:17] -rw-r--r-- 1 m m      5112 Oct 12 23:47 queuedata.json
[2025-10-13 05:30:17] -rwx------ 1 m m     36292 Oct 12 23:47 runpilot2-wrapper.sh
[2025-10-13 05:30:17] -rw-rw-r-- 1 m m       100 Oct 13 02:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:30:17] -rwxr-xr-x 1 m m      7986 Oct 13 02:18 run_atlas
[2025-10-13 05:30:17] -rw-rw-r-- 1 m m       105 Oct 13 02:18 job.xml
[2025-10-13 05:30:17] -rw-r--r-- 2 m m     15120 Oct 13 02:18 start_atlas.sh
[2025-10-13 05:30:17] drwxrwx--x 2 m m      4096 Oct 13 02:18 shared
[2025-10-13 05:30:17] -rw-r--r-- 2 m m    569682 Oct 13 02:18 input.tar.gz
[2025-10-13 05:30:17] -rw-rw-r-- 1 m m      5884 Oct 13 02:18 init_data.xml
[2025-10-13 05:30:17] -rw-r--r-- 2 m m 224351694 Oct 13 02:18 EVNT.46676267._004628.pool.root.1
[2025-10-13 05:30:17] -rw-rw-r-- 1 m m         0 Oct 13 02:18 boinc_lockfile
[2025-10-13 05:30:17] -rw-rw-r-- 1 m m      2549 Oct 13 02:18 pandaJob.out
[2025-10-13 05:30:17] -rw------- 1 m m    975595 Oct 13 02:19 agis_schedconf.cvmfs.json
[2025-10-13 05:30:17] drwx------ 5 m m      4096 Oct 13 02:19 pilot3
[2025-10-13 05:30:17] -rw------- 1 m m 194464472 Oct 13 05:27 HITS.46676269._091408.pool.root.1
[2025-10-13 05:30:17] -rw-rw-r-- 1 m m       530 Oct 13 05:27 boinc_task_state.xml
[2025-10-13 05:30:17] -rw------- 1 m m      1031 Oct 13 05:27 memory_monitor_summary.json
[2025-10-13 05:30:17] -rw------- 1 m m   1560580 Oct 13 05:28 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:30:17] -rw------- 1 m m    345977 Oct 13 05:28 log.46676269._091408.job.log.tgz.1
[2025-10-13 05:30:17] -rw------- 1 m m        95 Oct 13 05:29 pilot_heartbeat.json
[2025-10-13 05:30:17] -rw------- 1 m m      7797 Oct 13 05:29 heartbeat.json
[2025-10-13 05:30:17] -rw-rw-r-- 1 m m      8192 Oct 13 05:30 boinc_mmap_file
[2025-10-13 05:30:17] -rw-rw-r-- 1 m m        28 Oct 13 05:30 wrapper_checkpoint.txt
[2025-10-13 05:30:17] -rw------- 1 m m       814 Oct 13 05:30 pilotlog.txt
[2025-10-13 05:30:17] -rw------- 1 m m   1605594 Oct 13 05:30 log.46676269._091408.job.log.1
[2025-10-13 05:30:17] -rw------- 1 m m       357 Oct 13 05:30 output.list
[2025-10-13 05:30:17] -rw-rw-r-- 1 m m       620 Oct 13 05:30 runtime_log
[2025-10-13 05:30:17] -rw------- 1 m m   1966080 Oct 13 05:30 result.tar.gz
[2025-10-13 05:30:17] -rw-rw-r-- 1 m m      8618 Oct 13 05:30 runtime_log.err
[2025-10-13 05:30:17] -rw------- 1 m m       645 Oct 13 05:30 OGmNDmv1JS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzulNDm0KRZAo.diag
[2025-10-13 05:30:17] -rw-rw-r-- 1 m m     20863 Oct 13 05:30 stderr.txt
[2025-10-13 05:30:17] HITS file was successfully produced:
[2025-10-13 05:30:17] -rw------- 1 m m 194464472 Oct 13 05:27 shared/HITS.pool.root.1
[2025-10-13 05:30:17]  *** Contents of shared directory: ***
[2025-10-13 05:30:17] total 411508
[2025-10-13 05:30:17] -rw-r--r-- 2 m m     15120 Oct 13 02:18 start_atlas.sh
[2025-10-13 05:30:17] -rw-r--r-- 2 m m    569682 Oct 13 02:18 input.tar.gz
[2025-10-13 05:30:17] -rw-r--r-- 2 m m 224351694 Oct 13 02:18 ATLAS.root_0
[2025-10-13 05:30:17] -rw------- 1 m m 194464472 Oct 13 05:27 HITS.pool.root.1
[2025-10-13 05:30:17] -rw------- 1 m m   1966080 Oct 13 05:30 result.tar.gz
05:30:18 (4087): run_atlas exited; CPU time 43551.774130
05:30:18 (4087): called boinc_finish(0)

</stderr_txt>
]]>

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