Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:04:27 (2273316): wrapper (7.7.26015): starting
18:04:27 (2273316): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 18:04:27] Arguments: --nthreads 12
[2025-10-12 18:04:27] Threads: 12
[2025-10-12 18:04:27] Checking for CVMFS
[2025-10-12 18:04:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:04:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:04:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:04:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:04:29] 2.11.3.0 3021 24712 218272 151642 1 675 34923435 45568000 19076 130560 0 325243253 99.899 107075342 17296 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 18:04:29] CVMFS is ok
[2025-10-12 18:04:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:04:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:04:29] Further information can be found at the LHC@home message board.
[2025-10-12 18:04:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:04:29] Checking for apptainer binary...
[2025-10-12 18:04:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:04:29] Running /usr/bin/apptainer --version
[2025-10-12 18:04:29] apptainer version 1.4.1-1.el9
[2025-10-12 18:04:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:04:29] wns0170.triumf.lcg
[2025-10-12 18:04:29] apptainer works
[2025-10-12 18:04:29] Set ATHENA_PROC_NUMBER=12
[2025-10-12 18:04:29] Set ATHENA_CORE_NUMBER=12
[2025-10-12 18:04:29] Starting ATLAS job with PandaID=6840853879
[2025-10-12 18:04:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:09:21]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | WARNING  | wrong length of table data, x=[1760317563.0], y=[10265.0] (must be same and length>=4)
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | INFO     | could have reported an average CPU frequency of 2823 MHz (4 samples)
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | INFO     | ..............................
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | INFO     | . Timing measurements:
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . get job = 0 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . initial setup = 3 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . payload setup = 18 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . stage-in = 0 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . payload execution = 48 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . stage-out = 0 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . log creation = 0 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | ..............................
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840853879/pilotlog.txt
[2025-10-12 18:09:21] 2025-10-13 01:08:48,692 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 18:09:21] - Log from pilotlog.txt -
[2025-10-12 18:09:21] 2025-10-13 01:08:48,647 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840853879/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | INFO     | extracted standard info from prmon json
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | WARNING  | wrong length of table data, x=[1760317563.0], y=[10265.0] (must be same and length>=4)
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | INFO     | could have reported an average CPU frequency of 2823 MHz (4 samples)
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | INFO     | ..............................
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | INFO     | . Timing measurements:
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . get job = 0 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . initial setup = 3 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . payload setup = 18 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . stage-in = 0 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . payload execution = 48 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . stage-out = 0 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . log creation = 0 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | ..............................
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840853879/pilotlog.txt
[2025-10-12 18:09:21] 2025-10-13 01:08:48,695 | WARNING  | 
[2025-10-12 18:09:21] [begin log extracts]
[2025-10-12 18:09:21] - Log from pilotlog.txt -
[2025-10-12 18:09:21] 2025-10-13 01:08:48,647 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840853879/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | INFO     | extracted standard info from prmon json
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | WARNING  | wrong length of table data, x=[1760317563.0], y=[10265.0] (must be same and length>=4)
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | INFO     | could have reported an average CPU frequency of 2823 MHz (4 samples)
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | INFO     | ..............................
[2025-10-12 18:09:21] 2025-10-13 01:08:48,648 | INFO     | . Timing measurements:
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . get job = 0 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . initial setup = 3 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . payload setup = 18 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . stage-in = 0 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . payload execution = 48 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . stage-out = 0 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | . log creation = 0 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | ..............................
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 18:09:21] 2025-10-13 01:08:48,649 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840853879/pilotlog.txt
[2025-10-12 18:09:21] [end log extracts]
[2025-10-12 18:09:21] 2025-10-13 01:08:48,695 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 18:09:21] 2025-10-13 01:08:48,698 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 18:09:21] 2025-10-13 01:08:48,753 | INFO     | 
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | job summary report
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | --------------------------------------------------
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | PanDA job id: 6840853879
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | task id: 46676269
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 18:06:28,488 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | pilot state: failed 
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | transexitcode: 65
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | exeerrorcode: 65
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | exitcode: 65
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | cpuconsumptiontime: 15 s
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | nevents: 0
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | neventsw: 0
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | pid: 2285586
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | pgrp: 2285586
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | corecount: 12
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | event service: False
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | sizes: {0: 2348854, 11: 2348854, 12: 2349144, 22: 2349172, 70: 2372378, 71: 2376826, 201: 2376964}
[2025-10-12 18:09:21] 2025-10-13 01:08:48,754 | INFO     | --------------------------------------------------
[2025-10-12 18:09:21] 2025-10-13 01:08:48,766 | INFO     | 
[2025-10-12 18:09:21] 2025-10-13 01:08:48,766 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 18:09:21] 2025-10-13 01:08:48,813 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:09:21] 2025-10-13 01:08:48,813 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:09:21] 2025-10-13 01:08:48,813 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:09:21] 2025-10-13 01:08:48,813 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:09:21] 2025-10-13 01:08:48,813 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:09:21] 2025-10-13 01:08:48,813 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:09:21] 2025-10-13 01:08:48,813 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:09:21] 2025-10-13 01:08:48,813 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:09:21] 2025-10-13 01:08:48,813 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:09:21] 2025-10-13 01:08:48,813 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:09:21] 2025-10-13 01:08:48,813 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:09:21] 2025-10-13 01:08:48,813 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:09:21] 2025-10-13 01:08:48,814 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:09:21] 2025-10-13 01:08:48,814 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:09:21] 2025-10-13 01:08:48,814 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:09:21] 2025-10-13 01:08:48,814 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:09:21] 2025-10-13 01:08:48,814 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:09:21] 2025-10-13 01:08:48,814 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:09:21] 2025-10-13 01:08:48,814 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:09:21] 2025-10-13 01:08:48,814 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:09:21] 2025-10-13 01:08:48,814 | INFO     | job 6840853879 has completed (purged errors)
[2025-10-12 18:09:21] 2025-10-13 01:08:48,814 | INFO     | overall cleanup function is called
[2025-10-12 18:09:21] 2025-10-13 01:08:49,845 | INFO     | --- collectZombieJob: --- 10, [2285586]
[2025-10-12 18:09:21] 2025-10-13 01:08:49,845 | INFO     | zombie collector waiting for pid 2285586
[2025-10-12 18:09:21] 2025-10-13 01:08:49,845 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:09:21] 2025-10-13 01:08:49,845 | INFO     | collected zombie processes
[2025-10-12 18:09:21] 2025-10-13 01:08:49,845 | INFO     | will attempt to kill all subprocesses of pid=2285586
[2025-10-12 18:09:21] 2025-10-13 01:08:50,175 | INFO     | process IDs to be killed: [2285586] (in reverse order)
[2025-10-12 18:09:21] 2025-10-13 01:08:50,314 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:09:21] 2025-10-13 01:08:50,315 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:09:21] 2025-10-13 01:08:50,327 | INFO     | did not find any defunct processes belonging to 2285586
[2025-10-12 18:09:21] 2025-10-13 01:08:50,338 | INFO     | did not find any defunct processes belonging to 2285586
[2025-10-12 18:09:21] 2025-10-13 01:08:50,339 | INFO     | ready for new job
[2025-10-12 18:09:21] 2025-10-13 01:08:50,339 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:09:21] 2025-10-13 01:08:50,342 | INFO     | ***************************************
[2025-10-12 18:09:21] 2025-10-13 01:08:50,342 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:09:21] 2025-10-13 01:08:50,342 | INFO     | ***************************************
[2025-10-12 18:09:21] 2025-10-13 01:08:50,342 | INFO     | 
[2025-10-12 18:09:21] 2025-10-13 01:08:50,344 | INFO     | architecture information:
[2025-10-12 18:09:21] 2025-10-13 01:08:50,346 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:09:21] 2025-10-13 01:08:50,362 | INFO     | cat /etc/os-release:
[2025-10-12 18:09:21] NAME="CentOS Linux"
[2025-10-12 18:09:21] VERSION="7 (Core)"
[2025-10-12 18:09:21] ID="centos"
[2025-10-12 18:09:21] ID_LIKE="rhel fedora"
[2025-10-12 18:09:21] VERSION_ID="7"
[2025-10-12 18:09:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:09:21] ANSI_COLOR="0;31"
[2025-10-12 18:09:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:09:21] HOME_URL="https://www.centos.org/"
[2025-10-12 18:09:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:09:21] 
[2025-10-12 18:09:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:09:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:09:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:09:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:09:21] 
[2025-10-12 18:09:21] 2025-10-13 01:08:50,363 | INFO     | ***************************************
[2025-10-12 18:09:21] 2025-10-13 01:08:50,866 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 18:09:21] 2025-10-13 01:08:50,904 | INFO     | sufficient remaining disk space (2236179546112 B)
[2025-10-12 18:09:21] 2025-10-13 01:08:50,904 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:09:21] 2025-10-13 01:08:50,904 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:09:21] 2025-10-13 01:08:50,905 | INFO     | update_server=False
[2025-10-12 18:09:21] 2025-10-13 01:08:50,905 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:09:21] 2025-10-13 01:08:50,905 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:09:21] 2025-10-13 01:08:50,905 | INFO     | aborting loop
[2025-10-12 18:09:21] 2025-10-13 01:08:50,906 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:09:21] 2025-10-13 01:08:50,952 | INFO     | all payload control threads have been joined
[2025-10-12 18:09:21] 2025-10-13 01:08:51,424 | INFO     | all job control threads have been joined
[2025-10-12 18:09:21] 2025-10-13 01:08:51,748 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:09:21] 2025-10-13 01:08:51,802 | INFO     | all data control threads have been joined
[2025-10-12 18:09:21] 2025-10-13 01:08:51,909 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:09:21] 2025-10-13 01:08:51,911 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:09:21] 2025-10-13 01:08:51,957 | INFO     | [payload] control thread has finished
[2025-10-12 18:09:21] 2025-10-13 01:08:51,967 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:09:21] 2025-10-13 01:08:52,133 | INFO     | [job] validate thread has finished
[2025-10-12 18:09:21] 2025-10-13 01:08:52,336 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:09:21] 2025-10-13 01:08:52,429 | INFO     | [job] control thread has finished
[2025-10-12 18:09:21] 2025-10-13 01:08:52,480 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:09:21] 2025-10-13 01:08:52,496 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:09:21] 2025-10-13 01:08:52,548 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:09:21] 2025-10-13 01:08:52,560 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:09:21] 2025-10-13 01:08:52,807 | INFO     | [data] control thread has finished
[2025-10-12 18:09:21] 2025-10-13 01:08:52,889 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:09:21] 2025-10-13 01:08:52,916 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:09:21] 2025-10-13 01:08:53,029 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:09:21] 2025-10-13 01:08:53,768 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:09:21] 2025-10-13 01:08:54,774 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:09:21] 2025-10-13 01:08:55,770 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:09:21] 2025-10-13 01:08:57,650 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140071612008256)>', '<ExcThread(monitor, started 140071080548096)>']
[2025-10-12 18:09:21] 2025-10-13 01:09:02,675 | INFO     | all workflow threads have been joined
[2025-10-12 18:09:21] 2025-10-13 01:09:02,676 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:09:21] 2025-10-13 01:09:02,676 | INFO     | traces error code: 0
[2025-10-12 18:09:21] 2025-10-13 01:09:02,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:09:21] 2025-10-13 01:09:20,634 | INFO     | PID=2278739 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:09:21] 2025-10-13 01:09:20,634 | INFO     | .. there are 35 such processes running
[2025-10-12 18:09:21] 2025-10-13 01:09:20,635 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:09:21] 2025-10-13 01:09:20,635 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:09:21] 2025-10-13 01:09:20,635 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:09:21] 2025-10-13 01:09:20,635 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:09:21] 2025-10-13 01:09:20,635 | INFO     | [monitor] control thread has ended
[2025-10-12 18:09:21] 2025-10-13 01:09:20,728 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:09:21] 2025-10-13 01:09:20,730 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:09:21] 2025-10-13 01:09:20,731 [wrapper] pilotpid: 2278739
[2025-10-12 18:09:21] 2025-10-13 01:09:20,732 [wrapper] Pilot exit status: 0
[2025-10-12 18:09:21] 2025-10-13 01:09:20,768 [wrapper] pandaids: 6840853879
[2025-10-12 18:09:21] 2025-10-13 01:09:20,847 [wrapper] cleanup supervisor_pilot 2278745 2278740
[2025-10-12 18:09:21] 2025-10-13 01:09:20,857 [wrapper] Test setup, not cleaning
[2025-10-12 18:09:21] 2025-10-13 01:09:20,869 [wrapper] apfmon messages muted
[2025-10-12 18:09:21] 2025-10-13 01:09:20,877 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:09:21] 2025-10-13 01:09:20,897 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:09:21]  *** Error codes and diagnostics ***
[2025-10-12 18:09:21]     "exeErrorCode": 65,
[2025-10-12 18:09:21]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 18:09:21]     "pilotErrorCode": 1305,
[2025-10-12 18:09:21]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 18:09:21]  *** Listing of results directory ***
[2025-10-12 18:09:21] total 219944
[2025-10-12 18:09:21] -rw-r--r--. 1 boinc boinc    557409 Oct 12 14:57 pilot3.tar.gz
[2025-10-12 18:09:21] -rwx------. 1 boinc boinc     36292 Oct 12 15:47 runpilot2-wrapper.sh
[2025-10-12 18:09:21] -rw-r--r--. 1 boinc boinc      5112 Oct 12 15:47 queuedata.json
[2025-10-12 18:09:21] -rw-r--r--. 1 boinc boinc       100 Oct 12 18:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:09:21] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 18:04 run_atlas
[2025-10-12 18:09:21] -rw-r--r--. 1 boinc boinc       105 Oct 12 18:04 job.xml
[2025-10-12 18:09:21] -rw-r--r--. 1 boinc boinc      6627 Oct 12 18:04 init_data.xml
[2025-10-12 18:09:21] -rw-r--r--. 2 boinc boinc 221097303 Oct 12 18:04 EVNT.46676267._004631.pool.root.1
[2025-10-12 18:09:21] drwxrwx--x. 2 boinc boinc      4096 Oct 12 18:04 shared
[2025-10-12 18:09:21] -rw-r--r--. 2 boinc boinc    569683 Oct 12 18:04 input.tar.gz
[2025-10-12 18:09:21] -rw-r--r--. 2 boinc boinc     15120 Oct 12 18:04 start_atlas.sh
[2025-10-12 18:09:21] -rw-r--r--. 1 boinc boinc         0 Oct 12 18:04 boinc_lockfile
[2025-10-12 18:09:21] -rw-r--r--. 1 boinc boinc      2550 Oct 12 18:04 pandaJob.out
[2025-10-12 18:09:21] -rw-------. 1 boinc boinc    975603 Oct 12 18:04 agis_schedconf.cvmfs.json
[2025-10-12 18:09:21] -rw-------. 1 boinc boinc   1560580 Oct 12 18:04 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:09:21] drwx------. 5 boinc boinc      4096 Oct 12 18:04 pilot3
[2025-10-12 18:09:21] -rw-------. 1 boinc boinc       969 Oct 12 18:06 memory_monitor_summary.json
[2025-10-12 18:09:21] -rw-r--r--. 1 boinc boinc       523 Oct 12 18:06 boinc_task_state.xml
[2025-10-12 18:09:21] -rw-------. 1 boinc boinc     21854 Oct 12 18:06 log.46676269._091502.job.log.tgz.1
[2025-10-12 18:09:21] -rw-------. 1 boinc boinc      8402 Oct 12 18:08 heartbeat.json
[2025-10-12 18:09:21] -rw-------. 1 boinc boinc        95 Oct 12 18:09 pilot_heartbeat.json
[2025-10-12 18:09:21] -rw-------. 1 boinc boinc       823 Oct 12 18:09 pilotlog.txt
[2025-10-12 18:09:21] -rw-r--r--. 1 boinc boinc      8192 Oct 12 18:09 boinc_mmap_file
[2025-10-12 18:09:21] -rw-------. 1 boinc boinc     90603 Oct 12 18:09 log.46676269._091502.job.log.1
[2025-10-12 18:09:21] -rw-------. 1 boinc boinc       188 Oct 12 18:09 output.list
[2025-10-12 18:09:21] -rw-r--r--. 1 boinc boinc       620 Oct 12 18:09 runtime_log
[2025-10-12 18:09:21] -rw-------. 1 boinc boinc    133120 Oct 12 18:09 result.tar.gz
[2025-10-12 18:09:21] -rw-r--r--. 1 boinc boinc        22 Oct 12 18:09 wrapper_checkpoint.txt
[2025-10-12 18:09:21] -rw-------. 1 boinc boinc       644 Oct 12 18:09 tIAODmO1JS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpulNDmdS1HWm.diag
[2025-10-12 18:09:21] -rw-r--r--. 1 boinc boinc      8528 Oct 12 18:09 runtime_log.err
[2025-10-12 18:09:21] -rw-r--r--. 1 boinc boinc     21781 Oct 12 18:09 stderr.txt
[2025-10-12 18:09:21] No HITS result produced
[2025-10-12 18:09:21]  *** Contents of shared directory: ***
[2025-10-12 18:09:21] total 216624
[2025-10-12 18:09:21] -rw-r--r--. 2 boinc boinc 221097303 Oct 12 18:04 ATLAS.root_0
[2025-10-12 18:09:21] -rw-r--r--. 2 boinc boinc    569683 Oct 12 18:04 input.tar.gz
[2025-10-12 18:09:21] -rw-r--r--. 2 boinc boinc     15120 Oct 12 18:04 start_atlas.sh
[2025-10-12 18:09:21] -rw-------. 1 boinc boinc    133120 Oct 12 18:09 result.tar.gz
18:09:23 (2273316): run_atlas exited; CPU time 22.955014
18:09:23 (2273316): called boinc_finish(0)

</stderr_txt>
]]>

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