Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:18:43 (3903867): wrapper (7.7.26015): starting
12:18:43 (3903867): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 12:18:43] Arguments: --nthreads 4
[2025-10-13 12:18:43] Threads: 4
[2025-10-13 12:18:43] Checking for CVMFS
[2025-10-13 12:18:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 12:18:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 12:18:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 12:18:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 12:18:43] 2.9.2.0 1695166 5641 94996 151658 1 56 28182590 36864000 0 130560 0 5775328 99.993 191289 777 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 12:18:43] CVMFS is ok
[2025-10-13 12:18:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 12:18:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 12:18:43] Further information can be found at the LHC@home message board.
[2025-10-13 12:18:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 12:18:43] Checking for apptainer binary...
[2025-10-13 12:18:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 12:18:43] Running /usr/bin/apptainer --version
[2025-10-13 12:18:43] apptainer version 1.4.1-1.1
[2025-10-13 12:18:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 12:18:43] magicA244a
[2025-10-13 12:18:43] apptainer works
[2025-10-13 12:18:43] Set ATHENA_PROC_NUMBER=4
[2025-10-13 12:18:43] Set ATHENA_CORE_NUMBER=4
[2025-10-13 12:18:43] Starting ATLAS job with PandaID=6840749353
[2025-10-13 12:18:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:22:17]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:22:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:22:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:22:17] 
[2025-10-13 13:22:17] 2025-10-13 11:21:45,453 | INFO     | ***************************************
[2025-10-13 13:22:17] 2025-10-13 11:21:45,956 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 13:22:17] 2025-10-13 11:21:45,970 | INFO     | sufficient remaining disk space (331438096384 B)
[2025-10-13 13:22:17] 2025-10-13 11:21:45,970 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:22:17] 2025-10-13 11:21:45,970 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:22:17] 2025-10-13 11:21:45,970 | INFO     | update_server=False
[2025-10-13 13:22:17] 2025-10-13 11:21:45,970 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:22:17] 2025-10-13 11:21:45,971 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:22:17] 2025-10-13 11:21:45,971 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:22:17] 2025-10-13 11:21:46,424 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 13:22:17] 2025-10-13 11:21:46,424 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 13:22:17] 2025-10-13 11:21:46,424 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:22:17] 2025-10-13 11:21:46,425 | INFO     | will abort loop
[2025-10-13 13:22:17] 2025-10-13 11:21:46,546 | INFO     | all data control threads have been joined
[2025-10-13 13:22:17] 2025-10-13 11:21:46,715 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:22:17] 2025-10-13 11:21:46,748 | INFO     | all job control threads have been joined
[2025-10-13 13:22:17] 2025-10-13 11:21:46,976 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:22:17] 2025-10-13 11:21:46,977 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:22:17] 2025-10-13 11:21:46,977 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:22:17] 2025-10-13 11:21:47,197 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:22:17] 2025-10-13 11:21:47,351 | INFO     | all payload control threads have been joined
[2025-10-13 13:22:17] 2025-10-13 11:21:47,404 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:22:17] 2025-10-13 11:21:47,430 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:22:17] 2025-10-13 11:21:47,552 | INFO     | [data] control thread has finished
[2025-10-13 13:22:17] 2025-10-13 11:21:47,709 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:22:17] 2025-10-13 11:21:47,754 | INFO     | [job] control thread has finished
[2025-10-13 13:22:17] 2025-10-13 11:21:47,977 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:22:17] 2025-10-13 11:21:48,138 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:22:17] 2025-10-13 11:21:48,156 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:22:17] 2025-10-13 11:21:48,357 | INFO     | [payload] control thread has finished
[2025-10-13 13:22:17] 2025-10-13 11:21:48,391 | INFO     | [job] validate thread has finished
[2025-10-13 13:22:17] 2025-10-13 11:21:48,457 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:22:17] 2025-10-13 11:21:50,722 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:22:17] 2025-10-13 11:21:53,199 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:22:17] 2025-10-13 11:21:53,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140569051252544)>', '<ExcThread(monitor, started 140568424339200)>']
[2025-10-13 13:22:17] 2025-10-13 11:21:58,348 | INFO     | all workflow threads have been joined
[2025-10-13 13:22:17] 2025-10-13 11:21:58,348 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:22:17] 2025-10-13 11:21:58,348 | INFO     | traces error code: 0
[2025-10-13 13:22:17] 2025-10-13 11:21:58,348 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:22:17] 2025-10-13 11:22:16,869 | INFO     | PID=3907647 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 13:22:17] 2025-10-13 11:22:16,869 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:22:17] 2025-10-13 11:22:16,869 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:22:17] 2025-10-13 11:22:16,869 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:22:17] 2025-10-13 11:22:16,869 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:22:17] 2025-10-13 11:22:16,869 | INFO     | [monitor] control thread has ended
[2025-10-13 13:22:17] 2025-10-13 11:22:16,923 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:22:17] 2025-10-13 11:22:16,926 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:22:17] 2025-10-13 11:22:16,929 [wrapper] pilotpid: 3907647
[2025-10-13 13:22:17] 2025-10-13 11:22:16,931 [wrapper] Pilot exit status: 0
[2025-10-13 13:22:17] 2025-10-13 11:22:16,939 [wrapper] pandaids: 6840749353
[2025-10-13 13:22:17] 2025-10-13 11:22:16,957 [wrapper] cleanup supervisor_pilot 3924321 3907648
[2025-10-13 13:22:17] 2025-10-13 11:22:16,959 [wrapper] Test setup, not cleaning
[2025-10-13 13:22:17] 2025-10-13 11:22:16,962 [wrapper] apfmon messages muted
[2025-10-13 13:22:17] 2025-10-13 11:22:16,964 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:22:17] 2025-10-13 11:22:16,967 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:22:17]  *** Error codes and diagnostics ***
[2025-10-13 13:22:17]     "exeErrorCode": 0,
[2025-10-13 13:22:17]     "exeErrorDiag": "",
[2025-10-13 13:22:17]     "pilotErrorCode": 0,
[2025-10-13 13:22:17]     "pilotErrorDiag": "",
[2025-10-13 13:22:17]  *** Listing of results directory ***
[2025-10-13 13:22:17] total 414680
[2025-10-13 13:22:17] -rw-r--r-- 1 boinc boinc    557409 Oct 12 22:23 pilot3.tar.gz
[2025-10-13 13:22:17] -rw-r--r-- 1 boinc boinc      5112 Oct 12 22:38 queuedata.json
[2025-10-13 13:22:17] -rwx------ 1 boinc boinc     36292 Oct 12 22:38 runpilot2-wrapper.sh
[2025-10-13 13:22:17] -rw-r--r-- 1 boinc boinc       100 Oct 13 12:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:22:17] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 12:18 run_atlas
[2025-10-13 13:22:17] -rw-r--r-- 1 boinc boinc       105 Oct 13 12:18 job.xml
[2025-10-13 13:22:17] -rw-r--r-- 2 boinc boinc 221309483 Oct 13 12:18 EVNT.46676267._004854.pool.root.1
[2025-10-13 13:22:17] -rw-r--r-- 2 boinc boinc    569682 Oct 13 12:18 input.tar.gz
[2025-10-13 13:22:17] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:18 start_atlas.sh
[2025-10-13 13:22:17] drwxrwx--x 2 boinc boinc      4096 Oct 13 12:18 shared
[2025-10-13 13:22:17] -rw-r--r-- 1 boinc boinc         0 Oct 13 12:18 boinc_setup_complete
[2025-10-13 13:22:17] -rw-r--r-- 1 boinc boinc      6438 Oct 13 12:18 init_data.xml
[2025-10-13 13:22:17] -rw-r--r-- 1 boinc boinc         0 Oct 13 12:18 boinc_lockfile
[2025-10-13 13:22:17] -rw-r--r-- 1 boinc boinc      2550 Oct 13 12:18 pandaJob.out
[2025-10-13 13:22:17] -rw------- 1 boinc boinc    972497 Oct 13 12:18 agis_schedconf.cvmfs.json
[2025-10-13 13:22:17] -rw------- 1 boinc boinc   1560580 Oct 13 12:18 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:22:17] drwx------ 5 boinc boinc      4096 Oct 13 12:18 pilot3
[2025-10-13 13:22:17] -rw------- 1 boinc boinc 197794787 Oct 13 13:21 HITS.46676269._088874.pool.root.1
[2025-10-13 13:22:17] -rw-r--r-- 1 boinc boinc       529 Oct 13 13:21 boinc_task_state.xml
[2025-10-13 13:22:17] -rw------- 1 boinc boinc      1028 Oct 13 13:21 memory_monitor_summary.json
[2025-10-13 13:22:17] -rw------- 1 boinc boinc    255178 Oct 13 13:21 log.46676269._088874.job.log.tgz.1
[2025-10-13 13:22:17] -rw------- 1 boinc boinc      7754 Oct 13 13:21 heartbeat.json
[2025-10-13 13:22:17] -rw-r--r-- 1 boinc boinc      8192 Oct 13 13:22 boinc_mmap_file
[2025-10-13 13:22:17] -rw-r--r-- 1 boinc boinc        27 Oct 13 13:22 wrapper_checkpoint.txt
[2025-10-13 13:22:17] -rw------- 1 boinc boinc       747 Oct 13 13:22 pilotlog.txt
[2025-10-13 13:22:17] -rw------- 1 boinc boinc        95 Oct 13 13:22 pilot_heartbeat.json
[2025-10-13 13:22:17] -rw------- 1 boinc boinc    567824 Oct 13 13:22 log.46676269._088874.job.log.1
[2025-10-13 13:22:17] -rw------- 1 boinc boinc       357 Oct 13 13:22 output.list
[2025-10-13 13:22:17] -rw-r--r-- 1 boinc boinc       620 Oct 13 13:22 runtime_log
[2025-10-13 13:22:17] -rw------- 1 boinc boinc    839680 Oct 13 13:22 result.tar.gz
[2025-10-13 13:22:17] -rw-r--r-- 1 boinc boinc      8797 Oct 13 13:22 runtime_log.err
[2025-10-13 13:22:17] -rw------- 1 boinc boinc       662 Oct 13 13:22 IWNMDmh0HS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmnyUMDmYDvM3m.diag
[2025-10-13 13:22:17] -rw-r--r-- 1 boinc boinc      8329 Oct 13 13:22 stderr.txt
[2025-10-13 13:22:17] HITS file was successfully produced:
[2025-10-13 13:22:17] -rw------- 1 boinc boinc 197794787 Oct 13 13:21 shared/HITS.pool.root.1
[2025-10-13 13:22:17]  *** Contents of shared directory: ***
[2025-10-13 13:22:17] total 410688
[2025-10-13 13:22:17] -rw-r--r-- 2 boinc boinc 221309483 Oct 13 12:18 ATLAS.root_0
[2025-10-13 13:22:17] -rw-r--r-- 2 boinc boinc    569682 Oct 13 12:18 input.tar.gz
[2025-10-13 13:22:17] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:18 start_atlas.sh
[2025-10-13 13:22:17] -rw------- 1 boinc boinc 197794787 Oct 13 13:21 HITS.pool.root.1
[2025-10-13 13:22:17] -rw------- 1 boinc boinc    839680 Oct 13 13:22 result.tar.gz
13:22:18 (3903867): run_atlas exited; CPU time 14126.845218
13:22:18 (3903867): called boinc_finish(0)

</stderr_txt>
]]>

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