Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:40:41 (23421): wrapper (7.7.26015): starting
20:40:41 (23421): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:40:41] Arguments: --nthreads 8
[2025-10-12 20:40:41] Threads: 8
[2025-10-12 20:40:41] Checking for CVMFS
[2025-10-12 20:40:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:40:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:40:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:40:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:40:41] 2.11.2.0 24877 53616 127340 151642 1 188 14422769 18432000 1833 130560 0 49608722 99.976 2289587 37631 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 20:40:41] CVMFS is ok
[2025-10-12 20:40:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:40:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:40:41] Further information can be found at the LHC@home message board.
[2025-10-12 20:40:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:40:41] Checking for apptainer binary...
[2025-10-12 20:40:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:40:41] Running /usr/bin/apptainer --version
[2025-10-12 20:40:41] apptainer version 1.3.2-1.el7
[2025-10-12 20:40:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:40:42] c-206-3.aglt2.org
[2025-10-12 20:40:42] apptainer works
[2025-10-12 20:40:42] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:40:42] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:40:42] Starting ATLAS job with PandaID=6840749568
[2025-10-12 20:40:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:42:18]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:42:18] 2025-10-13 03:41:15,593 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:42:18] 2025-10-13 03:41:15,593 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:42:18] 2025-10-13 03:41:15,594 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:42:18] 2025-10-13 03:41:15,596 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:42:18] 2025-10-13 03:41:15,597 | INFO     | sum of square deviations: 1719429448.0
[2025-10-12 23:42:18] 2025-10-13 03:41:15,597 | INFO     | sum of deviations: 18562960569.000008
[2025-10-12 23:42:18] 2025-10-13 03:41:15,598 | INFO     | mean x: 1760321445.0
[2025-10-12 23:42:18] 2025-10-13 03:41:15,598 | INFO     | mean y: 2477406.7005649717
[2025-10-12 23:42:18] 2025-10-13 03:41:15,598 | INFO     | -- intersect: -19001953167.818775
[2025-10-12 23:42:18] 2025-10-13 03:41:15,598 | INFO     | intersect: -19001953167.818775
[2025-10-12 23:42:18] 2025-10-13 03:41:15,598 | INFO     | chi2: 1.3661690198430831
[2025-10-12 23:42:18] 2025-10-13 03:41:15,598 | INFO     | sum of square deviations: 1577789583.0
[2025-10-12 23:42:18] 2025-10-13 03:41:15,599 | INFO     | sum of deviations: 18051241999.999992
[2025-10-12 23:42:18] 2025-10-13 03:41:15,599 | INFO     | mean x: 1760321292.5
[2025-10-12 23:42:18] 2025-10-13 03:41:15,599 | INFO     | mean y: 2476855.4534883723
[2025-10-12 23:42:18] 2025-10-13 03:41:15,600 | INFO     | -- intersect: -20137081670.628044
[2025-10-12 23:42:18] 2025-10-13 03:41:15,600 | INFO     | intersect: -20137081670.628044
[2025-10-12 23:42:18] 2025-10-13 03:41:15,600 | INFO     | chi2: 1.367223093722021
[2025-10-12 23:42:18] 2025-10-13 03:41:15,600 | INFO     | current chi2=1.367223093722021 (change=-0.07715545175069455 %)
[2025-10-12 23:42:18] 2025-10-13 03:41:15,600 | INFO     | right removable region: 171
[2025-10-12 23:42:18] 2025-10-13 03:41:15,600 | INFO     | sum of square deviations: 1577789583.0
[2025-10-12 23:42:18] 2025-10-13 03:41:15,602 | INFO     | sum of deviations: -7449154476.500001
[2025-10-12 23:42:18] 2025-10-13 03:41:15,602 | INFO     | mean x: 1760321597.5
[2025-10-12 23:42:18] 2025-10-13 03:41:15,602 | INFO     | mean y: 2505078.5058139535
[2025-10-12 23:42:18] 2025-10-13 03:41:15,602 | INFO     | -- intersect: 8313440610.963793
[2025-10-12 23:42:18] 2025-10-13 03:41:15,603 | INFO     | intersect: 8313440610.963793
[2025-10-12 23:42:18] 2025-10-13 03:41:15,603 | INFO     | chi2: 0.02785665827781447
[2025-10-12 23:42:18] 2025-10-13 03:41:15,603 | INFO     | current chi2=0.02785665827781447 (change=97.96096545352682 %)
[2025-10-12 23:42:18] 2025-10-13 03:41:15,604 | INFO     | sum of square deviations: 1444149868.0
[2025-10-12 23:42:18] 2025-10-13 03:41:15,605 | INFO     | sum of deviations: -8344558013.000002
[2025-10-12 23:42:18] 2025-10-13 03:41:15,605 | INFO     | mean x: 1760321750.0
[2025-10-12 23:42:18] 2025-10-13 03:41:15,605 | INFO     | mean y: 2506053.994011976
[2025-10-12 23:42:18] 2025-10-13 03:41:15,606 | INFO     | -- intersect: 10173962140.309761
[2025-10-12 23:42:18] 2025-10-13 03:41:15,606 | INFO     | intersect: 10173962140.309761
[2025-10-12 23:42:18] 2025-10-13 03:41:15,606 | INFO     | chi2: 0.01483494871151797
[2025-10-12 23:42:18] 2025-10-13 03:41:15,606 | INFO     | current chi2=0.01483494871151797 (change=46.745411586813404 %)
[2025-10-12 23:42:18] 2025-10-13 03:41:15,607 | INFO     | sum of square deviations: 1318277740.5
[2025-10-12 23:42:18] 2025-10-13 03:41:15,608 | INFO     | sum of deviations: -7151580402.999999
[2025-10-12 23:42:18] 2025-10-13 03:41:15,608 | INFO     | mean x: 1760321902.5
[2025-10-12 23:42:18] 2025-10-13 03:41:15,609 | INFO     | mean y: 2504602.3703703703
[2025-10-12 23:42:18] 2025-10-13 03:41:15,609 | INFO     | -- intersect: 9552148986.197903
[2025-10-12 23:42:18] 2025-10-13 03:41:15,609 | INFO     | intersect: 9552148986.197903
[2025-10-12 23:42:18] 2025-10-13 03:41:15,609 | INFO     | chi2: 0.01443091362309164
[2025-10-12 23:42:18] 2025-10-13 03:41:15,610 | INFO     | current chi2=0.01443091362309164 (change=2.7235354586203138 %)
[2025-10-12 23:42:18] 2025-10-13 03:41:15,610 | INFO     | left removable region: 30
[2025-10-12 23:42:18] 2025-10-13 03:41:15,610 | INFO     | sum of square deviations: 869188390.0
[2025-10-12 23:42:18] 2025-10-13 03:41:15,611 | INFO     | sum of deviations: -2142829350.0000007
[2025-10-12 23:42:18] 2025-10-13 03:41:15,612 | INFO     | mean x: 1760322177.0
[2025-10-12 23:42:18] 2025-10-13 03:41:15,612 | INFO     | mean y: 2497785.8368794327
[2025-10-12 23:42:18] 2025-10-13 03:41:15,612 | INFO     | -- intersect: 4342258958.131757
[2025-10-12 23:42:18] 2025-10-13 03:41:15,612 | INFO     | intersect: 4342258958.131757
[2025-10-12 23:42:18] 2025-10-13 03:41:15,612 | INFO     | chi2: 0.007927130053745365
[2025-10-12 23:42:18] 2025-10-13 03:41:15,613 | INFO     | -- intersect: 4342258958.131757
[2025-10-12 23:42:18] 2025-10-13 03:41:15,613 | INFO     | current memory leak: -2.47 B/s (using 141 data points, chi2=0.01)
[2025-10-12 23:42:18] 2025-10-13 03:41:15,614 | INFO     | could have reported an average CPU frequency of 2564 MHz (9 samples)
[2025-10-12 23:42:18] 2025-10-13 03:41:15,614 | INFO     | ..............................
[2025-10-12 23:42:18] 2025-10-13 03:41:15,614 | INFO     | . Timing measurements:
[2025-10-12 23:42:18] 2025-10-13 03:41:15,614 | INFO     | . get job = 0 s
[2025-10-12 23:42:18] 2025-10-13 03:41:15,614 | INFO     | . initial setup = 2 s
[2025-10-12 23:42:18] 2025-10-13 03:41:15,615 | INFO     | . payload setup = 4 s
[2025-10-12 23:42:18] 2025-10-13 03:41:15,615 | INFO     | . stage-in = 0 s
[2025-10-12 23:42:18] 2025-10-13 03:41:15,615 | INFO     | . payload execution = 10789 s
[2025-10-12 23:42:18] 2025-10-13 03:41:15,615 | INFO     | . stage-out = 2 s
[2025-10-12 23:42:18] 2025-10-13 03:41:15,615 | INFO     | . log creation = 0 s
[2025-10-12 23:42:18] 2025-10-13 03:41:15,615 | INFO     | ..............................
[2025-10-12 23:42:18] 2025-10-13 03:41:15,778 | INFO     | 
[2025-10-12 23:42:18] 2025-10-13 03:41:15,779 | INFO     | job summary report
[2025-10-12 23:42:18] 2025-10-13 03:41:15,779 | INFO     | --------------------------------------------------
[2025-10-12 23:42:18] 2025-10-13 03:41:15,779 | INFO     | PanDA job id: 6840749568
[2025-10-12 23:42:18] 2025-10-13 03:41:15,779 | INFO     | task id: 46676269
[2025-10-12 23:42:18] 2025-10-13 03:41:15,779 | INFO     | errors: (none)
[2025-10-12 23:42:18] 2025-10-13 03:41:15,780 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:42:18] 2025-10-13 03:41:15,780 | INFO     | pilot state: finished 
[2025-10-12 23:42:18] 2025-10-13 03:41:15,780 | INFO     | transexitcode: 0
[2025-10-12 23:42:18] 2025-10-13 03:41:15,780 | INFO     | exeerrorcode: 0
[2025-10-12 23:42:18] 2025-10-13 03:41:15,780 | INFO     | exeerrordiag: 
[2025-10-12 23:42:18] 2025-10-13 03:41:15,780 | INFO     | exitcode: 0
[2025-10-12 23:42:18] 2025-10-13 03:41:15,781 | INFO     | exitmsg: OK
[2025-10-12 23:42:18] 2025-10-13 03:41:15,781 | INFO     | cpuconsumptiontime: 81204 s
[2025-10-12 23:42:18] 2025-10-13 03:41:15,781 | INFO     | nevents: 400
[2025-10-12 23:42:18] 2025-10-13 03:41:15,781 | INFO     | neventsw: 0
[2025-10-12 23:42:18] 2025-10-13 03:41:15,781 | INFO     | pid: 1105
[2025-10-12 23:42:18] 2025-10-13 03:41:15,781 | INFO     | pgrp: 1105
[2025-10-12 23:42:18] 2025-10-13 03:41:15,781 | INFO     | corecount: 8
[2025-10-12 23:42:18] 2025-10-13 03:41:15,782 | INFO     | event service: False
[2025-10-12 23:42:18] 2025-10-13 03:41:15,782 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 10797: 2378248, 10798: 2378247, 10802: 2387301, 10803: 2387485, 10808: 2387743}
[2025-10-12 23:42:18] 2025-10-13 03:41:15,782 | INFO     | --------------------------------------------------
[2025-10-12 23:42:18] 2025-10-13 03:41:15,782 | INFO     | 
[2025-10-12 23:42:18] 2025-10-13 03:41:15,782 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 23:42:18] 2025-10-13 03:41:15,808 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:42:18] 2025-10-13 03:41:15,808 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:42:18] 2025-10-13 03:41:15,809 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:42:18] 2025-10-13 03:41:15,809 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:42:18] 2025-10-13 03:41:15,809 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:42:18] 2025-10-13 03:41:15,809 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:42:18] 2025-10-13 03:41:15,809 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:42:18] 2025-10-13 03:41:15,809 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:42:18] 2025-10-13 03:41:15,810 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:42:18] 2025-10-13 03:41:15,810 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:42:18] 2025-10-13 03:41:15,810 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:42:18] 2025-10-13 03:41:15,810 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:42:18] 2025-10-13 03:41:15,810 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:42:18] 2025-10-13 03:41:15,811 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:42:18] 2025-10-13 03:41:15,811 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:42:18] 2025-10-13 03:41:15,811 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:42:18] 2025-10-13 03:41:15,811 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:42:18] 2025-10-13 03:41:15,811 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:42:18] 2025-10-13 03:41:15,811 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:42:18] 2025-10-13 03:41:15,812 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:42:18] 2025-10-13 03:41:15,812 | INFO     | job 6840749568 has completed (purged errors)
[2025-10-12 23:42:18] 2025-10-13 03:41:15,812 | INFO     | overall cleanup function is called
[2025-10-12 23:42:18] 2025-10-13 03:41:16,820 | INFO     | --- collectZombieJob: --- 10, [1105]
[2025-10-12 23:42:18] 2025-10-13 03:41:16,820 | INFO     | zombie collector waiting for pid 1105
[2025-10-12 23:42:18] 2025-10-13 03:41:16,820 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:42:18] 2025-10-13 03:41:16,821 | INFO     | collected zombie processes
[2025-10-12 23:42:18] 2025-10-13 03:41:16,821 | INFO     | will attempt to kill all subprocesses of pid=1105
[2025-10-12 23:42:18] 2025-10-13 03:41:16,987 | INFO     | process IDs to be killed: [1105] (in reverse order)
[2025-10-12 23:42:18] 2025-10-13 03:41:17,043 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:42:18] 2025-10-13 03:41:17,044 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:42:18] 2025-10-13 03:41:17,049 | INFO     | did not find any defunct processes belonging to 1105
[2025-10-12 23:42:18] 2025-10-13 03:41:17,054 | INFO     | did not find any defunct processes belonging to 1105
[2025-10-12 23:42:18] 2025-10-13 03:41:17,054 | INFO     | ready for new job
[2025-10-12 23:42:18] 2025-10-13 03:41:17,055 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:42:18] 2025-10-13 03:41:17,057 | INFO     | ***************************************
[2025-10-12 23:42:18] 2025-10-13 03:41:17,057 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:42:18] 2025-10-13 03:41:17,057 | INFO     | ***************************************
[2025-10-12 23:42:18] 2025-10-13 03:41:17,057 | INFO     | 
[2025-10-12 23:42:18] 2025-10-13 03:41:17,058 | INFO     | architecture information:
[2025-10-12 23:42:18] 2025-10-13 03:41:17,059 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:42:18] 2025-10-13 03:41:17,071 | INFO     | cat /etc/os-release:
[2025-10-12 23:42:18] NAME="CentOS Linux"
[2025-10-12 23:42:18] VERSION="7 (Core)"
[2025-10-12 23:42:18] ID="centos"
[2025-10-12 23:42:18] ID_LIKE="rhel fedora"
[2025-10-12 23:42:18] VERSION_ID="7"
[2025-10-12 23:42:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:42:18] ANSI_COLOR="0;31"
[2025-10-12 23:42:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:42:18] HOME_URL="https://www.centos.org/"
[2025-10-12 23:42:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:42:18] 
[2025-10-12 23:42:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:42:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:42:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:42:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:42:18] 
[2025-10-12 23:42:18] 2025-10-13 03:41:17,072 | INFO     | ***************************************
[2025-10-12 23:42:18] 2025-10-13 03:41:17,575 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 23:42:18] 2025-10-13 03:41:17,593 | INFO     | sufficient remaining disk space (28474081280 B)
[2025-10-12 23:42:18] 2025-10-13 03:41:17,594 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:42:18] 2025-10-13 03:41:17,594 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:42:18] 2025-10-13 03:41:17,594 | INFO     | update_server=False
[2025-10-12 23:42:18] 2025-10-13 03:41:17,594 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:42:18] 2025-10-13 03:41:17,595 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:42:18] 2025-10-13 03:41:17,595 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:42:18] 2025-10-13 03:41:17,595 | INFO     | aborting loop
[2025-10-12 23:42:18] 2025-10-13 03:41:17,595 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:42:18] 2025-10-13 03:41:17,747 | INFO     | all data control threads have been joined
[2025-10-12 23:42:18] 2025-10-13 03:41:18,228 | INFO     | all payload control threads have been joined
[2025-10-12 23:42:18] 2025-10-13 03:41:18,596 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:42:18] 2025-10-13 03:41:18,597 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:42:18] 2025-10-13 03:41:18,601 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:42:18] 2025-10-13 03:41:18,753 | INFO     | [data] control thread has finished
[2025-10-12 23:42:18] 2025-10-13 03:41:18,891 | INFO     | [job] validate thread has finished
[2025-10-12 23:42:18] 2025-10-13 03:41:18,919 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:42:18] 2025-10-13 03:41:19,139 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:42:18] 2025-10-13 03:41:19,186 | INFO     | all job control threads have been joined
[2025-10-12 23:42:18] 2025-10-13 03:41:19,233 | INFO     | [payload] control thread has finished
[2025-10-12 23:42:18] 2025-10-13 03:41:19,471 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:42:18] 2025-10-13 03:41:19,500 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:42:18] 2025-10-13 03:41:19,602 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:42:18] 2025-10-13 03:41:19,770 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:42:18] 2025-10-13 03:41:19,894 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:42:18] 2025-10-13 03:41:19,901 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:42:18] 2025-10-13 03:41:20,192 | INFO     | [job] control thread has finished
[2025-10-12 23:42:18] 2025-10-13 03:41:20,928 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:42:18] 2025-10-13 03:41:24,936 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:42:18] 2025-10-13 03:41:47,893 | INFO     | PID=27102 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 23:42:18] 2025-10-13 03:41:47,893 | INFO     | .. there are 3 such processes running
[2025-10-12 23:42:18] 2025-10-13 03:41:47,894 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:42:18] 2025-10-13 03:41:47,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:42:18] 2025-10-13 03:41:47,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:42:18] 2025-10-13 03:42:10,676 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:42:18] 2025-10-13 03:42:12,774 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139911276754752)>', '<ExcThread(monitor, started 139910698755840)>']
[2025-10-12 23:42:18] 2025-10-13 03:42:13,023 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:42:18] 2025-10-13 03:42:13,023 | INFO     | [monitor] control thread has ended
[2025-10-12 23:42:18] 2025-10-13 03:42:17,776 | INFO     | all workflow threads have been joined
[2025-10-12 23:42:18] 2025-10-13 03:42:17,777 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:42:18] 2025-10-13 03:42:17,777 | INFO     | traces error code: 0
[2025-10-12 23:42:18] 2025-10-13 03:42:17,777 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:42:18] 2025-10-13 03:42:17,861 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:42:18] 2025-10-13 03:42:17,863 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:42:18] 2025-10-13 03:42:17,865 [wrapper] pilotpid: 27102
[2025-10-12 23:42:18] 2025-10-13 03:42:17,867 [wrapper] Pilot exit status: 0
[2025-10-12 23:42:18] 2025-10-13 03:42:17,873 [wrapper] pandaids: 6840749568
[2025-10-12 23:42:18] 2025-10-13 03:42:17,900 [wrapper] cleanup supervisor_pilot 22921 27103
[2025-10-12 23:42:18] 2025-10-13 03:42:17,902 [wrapper] Test setup, not cleaning
[2025-10-12 23:42:18] 2025-10-13 03:42:17,904 [wrapper] apfmon messages muted
[2025-10-12 23:42:18] 2025-10-13 03:42:17,905 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:42:18] 2025-10-13 03:42:17,907 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:42:18]  *** Error codes and diagnostics ***
[2025-10-12 23:42:18]     "exeErrorCode": 0,
[2025-10-12 23:42:18]     "exeErrorDiag": "",
[2025-10-12 23:42:18]     "pilotErrorCode": 0,
[2025-10-12 23:42:18]     "pilotErrorDiag": "",
[2025-10-12 23:42:18]  *** Listing of results directory ***
[2025-10-12 23:42:18] total 415400
[2025-10-12 23:42:18] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 16:23 pilot3.tar.gz
[2025-10-12 23:42:18] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 16:40 queuedata.json
[2025-10-12 23:42:18] -rwx------ 1 boincer umatlas     36292 Oct 12 16:41 runpilot2-wrapper.sh
[2025-10-12 23:42:18] -rw-r--r-- 1 boincer umatlas       100 Oct 12 20:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:42:18] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 20:40 run_atlas
[2025-10-12 23:42:18] -rw-r--r-- 1 boincer umatlas       105 Oct 12 20:40 job.xml
[2025-10-12 23:42:18] -rw-r--r-- 2 boincer umatlas 219815875 Oct 12 20:40 EVNT.46676267._004859.pool.root.1
[2025-10-12 23:42:18] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:40 start_atlas.sh
[2025-10-12 23:42:18] drwxrwx--x 2 boincer umatlas      4096 Oct 12 20:40 shared
[2025-10-12 23:42:18] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 20:40 input.tar.gz
[2025-10-12 23:42:18] -rw-r--r-- 1 boincer umatlas         0 Oct 12 20:40 boinc_lockfile
[2025-10-12 23:42:18] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 20:40 pandaJob.out
[2025-10-12 23:42:18] -rw------- 1 boincer umatlas    975603 Oct 12 20:40 agis_schedconf.cvmfs.json
[2025-10-12 23:42:18] drwx------ 5 boincer umatlas      4096 Oct 12 20:40 pilot3
[2025-10-12 23:42:18] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 23:37 init_data.xml
[2025-10-12 23:42:18] -rw------- 1 boincer umatlas 197782564 Oct 12 23:40 HITS.46676269._089000.pool.root.1
[2025-10-12 23:42:18] -rw-r--r-- 1 boincer umatlas       530 Oct 12 23:40 boinc_task_state.xml
[2025-10-12 23:42:18] -rw------- 1 boincer umatlas      1052 Oct 12 23:41 memory_monitor_summary.json
[2025-10-12 23:42:18] -rw------- 1 boincer umatlas   1560580 Oct 12 23:41 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:42:18] -rw------- 1 boincer umatlas    419007 Oct 12 23:41 log.46676269._089000.job.log.tgz.1
[2025-10-12 23:42:18] -rw------- 1 boincer umatlas      7853 Oct 12 23:41 heartbeat.json
[2025-10-12 23:42:18] -rw------- 1 boincer umatlas        95 Oct 12 23:41 pilot_heartbeat.json
[2025-10-12 23:42:18] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 23:41 boinc_mmap_file
[2025-10-12 23:42:18] -rw-r--r-- 1 boincer umatlas        28 Oct 12 23:41 wrapper_checkpoint.txt
[2025-10-12 23:42:18] -rw------- 1 boincer umatlas      4821 Oct 12 23:42 pilotlog.txt
[2025-10-12 23:42:18] -rw------- 1 boincer umatlas   1514850 Oct 12 23:42 log.46676269._089000.job.log.1
[2025-10-12 23:42:18] -rw------- 1 boincer umatlas       357 Oct 12 23:42 output.list
[2025-10-12 23:42:18] -rw-r--r-- 1 boincer umatlas       620 Oct 12 23:42 runtime_log
[2025-10-12 23:42:18] -rw------- 1 boincer umatlas   1955840 Oct 12 23:42 result.tar.gz
[2025-10-12 23:42:18] -rw-r--r-- 1 boincer umatlas      8699 Oct 12 23:42 runtime_log.err
[2025-10-12 23:42:18] -rw------- 1 boincer umatlas       660 Oct 12 23:42 0MzKDmd3HS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhUlNDmWNOPJn.diag
[2025-10-12 23:42:18] -rw-r--r-- 1 boincer umatlas     20891 Oct 12 23:42 stderr.txt
[2025-10-12 23:42:18] HITS file was successfully produced:
[2025-10-12 23:42:18] -rw------- 1 boincer umatlas 197782564 Oct 12 23:40 shared/HITS.pool.root.1
[2025-10-12 23:42:18]  *** Contents of shared directory: ***
[2025-10-12 23:42:18] total 410304
[2025-10-12 23:42:18] -rw-r--r-- 2 boincer umatlas 219815875 Oct 12 20:40 ATLAS.root_0
[2025-10-12 23:42:18] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:40 start_atlas.sh
[2025-10-12 23:42:18] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 20:40 input.tar.gz
[2025-10-12 23:42:18] -rw------- 1 boincer umatlas 197782564 Oct 12 23:40 HITS.pool.root.1
[2025-10-12 23:42:18] -rw------- 1 boincer umatlas   1955840 Oct 12 23:42 result.tar.gz
23:42:19 (23421): run_atlas exited; CPU time 81350.960850
23:42:19 (23421): called boinc_finish(0)

</stderr_txt>
]]>

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