Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:55:28 (18715): wrapper (7.7.26015): starting
20:55:28 (18715): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 20:55:28] Arguments: --nthreads 12
[2025-10-12 20:55:28] Threads: 12
[2025-10-12 20:55:28] Checking for CVMFS
[2025-10-12 20:55:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:55:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:55:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:55:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:55:29] 2.11.2.0 2925 223629 98572 151642 3 59 11952322 20275201 1 130560 1 109009719 99.985 12916903 12189 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 20:55:29] CVMFS is ok
[2025-10-12 20:55:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:55:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:55:29] Further information can be found at the LHC@home message board.
[2025-10-12 20:55:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:55:29] Checking for apptainer binary...
[2025-10-12 20:55:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:55:29] Running /usr/bin/apptainer --version
[2025-10-12 20:55:29] apptainer version 1.3.2-1.el7
[2025-10-12 20:55:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:55:30] c-205-10.aglt2.org
[2025-10-12 20:55:30] apptainer works
[2025-10-12 20:55:30] Set ATHENA_PROC_NUMBER=12
[2025-10-12 20:55:30] Set ATHENA_CORE_NUMBER=12
[2025-10-12 20:55:30] Starting ATLAS job with PandaID=6840749346
[2025-10-12 20:55:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:12:59]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:12:59]  scope=mc23_13p6TeV
[2025-10-12 22:12:59]  status=None
[2025-10-12 22:12:59]  status_code=0
[2025-10-12 22:12:59]  storage_token=
[2025-10-12 22:12:59]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840749346/log.46676269._088867.job.log.tgz.1
[2025-10-12 22:12:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/01/log.46676269._088867.job.log.tgz.1
[2025-10-12 22:12:59]  workdir=None
[2025-10-12 22:12:59] ]
[2025-10-12 22:12:59] 2025-10-13 02:11:49,246 | INFO     | transferring file log.46676269._088867.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840749346/log.46676269._088867.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 22:12:59] 2025-10-13 02:11:49,247 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840749346/log.46676269._088867.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._088867.job
[2025-10-12 22:12:59] 2025-10-13 02:11:49,270 | INFO     | adding to output.list: log.46676269._088867.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/01/log.46676269._088867.job.log.tg
[2025-10-12 22:12:59] 2025-10-13 02:11:49,271 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 22:12:59] 2025-10-13 02:11:49,271 | INFO     | summary of transferred files:
[2025-10-12 22:12:59] 2025-10-13 02:11:49,271 | INFO     |  -- lfn=log.46676269._088867.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 22:12:59] 2025-10-13 02:11:49,271 | INFO     | stage-out finished correctly
[2025-10-12 22:12:59] 2025-10-13 02:11:49,644 | INFO     | time since job start (4564s) is within the limit (172800.0s)
[2025-10-12 22:12:59] 2025-10-13 02:11:51,512 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 22:12:59] 2025-10-13 02:11:51,650 | INFO     | time since job start (4566s) is within the limit (172800.0s)
[2025-10-12 22:12:59] 2025-10-13 02:11:51,997 | INFO     | job 6840749346 has state=finished
[2025-10-12 22:12:59] 2025-10-13 02:11:51,997 | INFO     | preparing for final server update for job 6840749346 in state='finished'
[2025-10-12 22:12:59] 2025-10-13 02:11:51,997 | INFO     | this job has now completed (state=finished)
[2025-10-12 22:12:59] 2025-10-13 02:11:51,998 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 22:12:59] 2025-10-13 02:11:51,998 | INFO     | log transfer has been attempted: DONE
[2025-10-12 22:12:59] 2025-10-13 02:11:51,998 | INFO     | job 6840749346 has finished - writing final server update
[2025-10-12 22:12:59] 2025-10-13 02:11:51,998 | INFO     | total number of processed events: 400 (read)
[2025-10-12 22:12:59] 2025-10-13 02:11:51,999 | INFO     | executing command: lscpu
[2025-10-12 22:12:59] 2025-10-13 02:11:52,026 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 22:12:59] 2025-10-13 02:11:53,655 | INFO     | time since job start (4568s) is within the limit (172800.0s)
[2025-10-12 22:12:59] 2025-10-13 02:11:54,209 | WARNING  | process 28877 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 22:12:59] 2025-10-13 02:11:54,209 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840749346/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:12:59] 2025-10-13 02:11:54,298 | INFO     | number of running child processes to parent process 28877: 1
[2025-10-12 22:12:59] 2025-10-13 02:11:54,298 | INFO     | maximum number of monitored processes: 6
[2025-10-12 22:12:59] 2025-10-13 02:11:54,781 | INFO     | PID=22463 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 22:12:59] 2025-10-13 02:11:55,782 | INFO     | time since job start (4570s) is within the limit (172800.0s)
[2025-10-12 22:12:59] 2025-10-13 02:11:56,802 | INFO     | monitor loop #342: job 0:6840749346 is in state 'finished'
[2025-10-12 22:12:59] 2025-10-13 02:11:56,802 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:12:59] 2025-10-13 02:11:56,855 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 22:12:59] 2025-10-13 02:11:56,859 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.8333333333333
[2025-10-12 22:12:59] 2025-10-13 02:11:56,861 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840749346/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:12:59] 2025-10-13 02:11:56,862 | INFO     | extracted standard info from prmon json
[2025-10-12 22:12:59] 2025-10-13 02:11:56,862 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:12:59] 2025-10-13 02:11:56,862 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:12:59] 2025-10-13 02:11:56,862 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:12:59] 2025-10-13 02:11:56,862 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:12:59] 2025-10-13 02:11:56,865 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:12:59] 2025-10-13 02:11:56,865 | INFO     | sum of square deviations: 97479037.0
[2025-10-12 22:12:59] 2025-10-13 02:11:56,866 | INFO     | sum of deviations: -3676988133.999999
[2025-10-12 22:12:59] 2025-10-13 02:11:56,866 | INFO     | mean x: 1760319323.5
[2025-10-12 22:12:59] 2025-10-13 02:11:56,866 | INFO     | mean y: 2716070.8235294116
[2025-10-12 22:12:59] 2025-10-13 02:11:56,866 | INFO     | -- intersect: 66403385012.191986
[2025-10-12 22:12:59] 2025-10-13 02:11:56,866 | INFO     | intersect: 66403385012.191986
[2025-10-12 22:12:59] 2025-10-13 02:11:56,867 | INFO     | chi2: 0.07748208256757798
[2025-10-12 22:12:59] 2025-10-13 02:11:56,867 | INFO     | -- intersect: 66403385012.191986
[2025-10-12 22:12:59] 2025-10-13 02:11:56,867 | INFO     | current memory leak: -37.72 B/s (using 68 data points, chi2=0.08)
[2025-10-12 22:12:59] 2025-10-13 02:11:56,867 | INFO     | could have reported an average CPU frequency of 2060 MHz (6 samples)
[2025-10-12 22:12:59] 2025-10-13 02:11:56,867 | INFO     | ..............................
[2025-10-12 22:12:59] 2025-10-13 02:11:56,867 | INFO     | . Timing measurements:
[2025-10-12 22:12:59] 2025-10-13 02:11:56,867 | INFO     | . get job = 0 s
[2025-10-12 22:12:59] 2025-10-13 02:11:56,868 | INFO     | . initial setup = 2 s
[2025-10-12 22:12:59] 2025-10-13 02:11:56,868 | INFO     | . payload setup = 7 s
[2025-10-12 22:12:59] 2025-10-13 02:11:56,868 | INFO     | . stage-in = 0 s
[2025-10-12 22:12:59] 2025-10-13 02:11:56,868 | INFO     | . payload execution = 4534 s
[2025-10-12 22:12:59] 2025-10-13 02:11:56,868 | INFO     | . stage-out = 0 s
[2025-10-12 22:12:59] 2025-10-13 02:11:56,868 | INFO     | . log creation = 0 s
[2025-10-12 22:12:59] 2025-10-13 02:11:56,868 | INFO     | ..............................
[2025-10-12 22:12:59] 2025-10-13 02:11:56,950 | INFO     | 
[2025-10-12 22:12:59] 2025-10-13 02:11:56,950 | INFO     | job summary report
[2025-10-12 22:12:59] 2025-10-13 02:11:56,950 | INFO     | --------------------------------------------------
[2025-10-12 22:12:59] 2025-10-13 02:11:56,950 | INFO     | PanDA job id: 6840749346
[2025-10-12 22:12:59] 2025-10-13 02:11:56,951 | INFO     | task id: 46676269
[2025-10-12 22:12:59] 2025-10-13 02:11:56,951 | INFO     | errors: (none)
[2025-10-12 22:12:59] 2025-10-13 02:11:56,951 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:12:59] 2025-10-13 02:11:56,951 | INFO     | pilot state: finished 
[2025-10-12 22:12:59] 2025-10-13 02:11:56,951 | INFO     | transexitcode: 0
[2025-10-12 22:12:59] 2025-10-13 02:11:56,951 | INFO     | exeerrorcode: 0
[2025-10-12 22:12:59] 2025-10-13 02:11:56,951 | INFO     | exeerrordiag: 
[2025-10-12 22:12:59] 2025-10-13 02:11:56,952 | INFO     | exitcode: 0
[2025-10-12 22:12:59] 2025-10-13 02:11:56,952 | INFO     | exitmsg: OK
[2025-10-12 22:12:59] 2025-10-13 02:11:56,952 | INFO     | cpuconsumptiontime: 46544 s
[2025-10-12 22:12:59] 2025-10-13 02:11:56,952 | INFO     | nevents: 400
[2025-10-12 22:12:59] 2025-10-13 02:11:56,952 | INFO     | neventsw: 0
[2025-10-12 22:12:59] 2025-10-13 02:11:56,952 | INFO     | pid: 28877
[2025-10-12 22:12:59] 2025-10-13 02:11:56,952 | INFO     | pgrp: 28877
[2025-10-12 22:12:59] 2025-10-13 02:11:56,953 | INFO     | corecount: 12
[2025-10-12 22:12:59] 2025-10-13 02:11:56,953 | INFO     | event service: False
[2025-10-12 22:12:59] 2025-10-13 02:11:56,953 | INFO     | sizes: {0: 2348857, 1: 2348885, 5: 2349147, 11: 2349203, 4545: 2375309, 4546: 2375308, 4547: 2384490, 4550: 2384546, 4555: 2384740}
[2025-10-12 22:12:59] 2025-10-13 02:11:56,953 | INFO     | --------------------------------------------------
[2025-10-12 22:12:59] 2025-10-13 02:11:56,953 | INFO     | 
[2025-10-12 22:12:59] 2025-10-13 02:11:56,953 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 22:12:59] 2025-10-13 02:11:56,978 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:12:59] 2025-10-13 02:11:56,978 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:12:59] 2025-10-13 02:11:56,978 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:12:59] 2025-10-13 02:11:56,978 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:12:59] 2025-10-13 02:11:56,978 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:12:59] 2025-10-13 02:11:56,979 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:12:59] 2025-10-13 02:11:56,979 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:12:59] 2025-10-13 02:11:56,979 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:12:59] 2025-10-13 02:11:56,979 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:12:59] 2025-10-13 02:11:56,979 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:12:59] 2025-10-13 02:11:56,980 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:12:59] 2025-10-13 02:11:56,980 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:12:59] 2025-10-13 02:11:56,980 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:12:59] 2025-10-13 02:11:56,980 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:12:59] 2025-10-13 02:11:56,980 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:12:59] 2025-10-13 02:11:56,980 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:12:59] 2025-10-13 02:11:56,981 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:12:59] 2025-10-13 02:11:56,981 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:12:59] 2025-10-13 02:11:56,981 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:12:59] 2025-10-13 02:11:56,981 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:12:59] 2025-10-13 02:11:56,981 | INFO     | job 6840749346 has completed (purged errors)
[2025-10-12 22:12:59] 2025-10-13 02:11:56,982 | INFO     | overall cleanup function is called
[2025-10-12 22:12:59] 2025-10-13 02:11:57,990 | INFO     | --- collectZombieJob: --- 10, [28877]
[2025-10-12 22:12:59] 2025-10-13 02:11:57,990 | INFO     | zombie collector waiting for pid 28877
[2025-10-12 22:12:59] 2025-10-13 02:11:58,015 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:12:59] 2025-10-13 02:11:58,015 | INFO     | collected zombie processes
[2025-10-12 22:12:59] 2025-10-13 02:11:58,015 | INFO     | will attempt to kill all subprocesses of pid=28877
[2025-10-12 22:12:59] 2025-10-13 02:11:58,104 | INFO     | process IDs to be killed: [28877] (in reverse order)
[2025-10-12 22:12:59] 2025-10-13 02:11:58,156 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:12:59] 2025-10-13 02:11:58,156 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:12:59] 2025-10-13 02:11:58,160 | INFO     | did not find any defunct processes belonging to 28877
[2025-10-12 22:12:59] 2025-10-13 02:11:58,164 | INFO     | did not find any defunct processes belonging to 28877
[2025-10-12 22:12:59] 2025-10-13 02:11:58,164 | INFO     | ready for new job
[2025-10-12 22:12:59] 2025-10-13 02:11:58,164 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:12:59] 2025-10-13 02:11:58,166 | INFO     | ***************************************
[2025-10-12 22:12:59] 2025-10-13 02:11:58,166 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:12:59] 2025-10-13 02:11:58,166 | INFO     | ***************************************
[2025-10-12 22:12:59] 2025-10-13 02:11:58,166 | INFO     | 
[2025-10-12 22:12:59] 2025-10-13 02:11:58,167 | INFO     | architecture information:
[2025-10-12 22:12:59] 2025-10-13 02:11:58,167 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:12:59] 2025-10-13 02:11:58,182 | INFO     | cat /etc/os-release:
[2025-10-12 22:12:59] NAME="CentOS Linux"
[2025-10-12 22:12:59] VERSION="7 (Core)"
[2025-10-12 22:12:59] ID="centos"
[2025-10-12 22:12:59] ID_LIKE="rhel fedora"
[2025-10-12 22:12:59] VERSION_ID="7"
[2025-10-12 22:12:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:12:59] ANSI_COLOR="0;31"
[2025-10-12 22:12:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:12:59] HOME_URL="https://www.centos.org/"
[2025-10-12 22:12:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:12:59] 
[2025-10-12 22:12:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:12:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:12:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:12:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:12:59] 
[2025-10-12 22:12:59] 2025-10-13 02:11:58,182 | INFO     | ***************************************
[2025-10-12 22:12:59] 2025-10-13 02:11:58,685 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 22:12:59] 2025-10-13 02:11:58,702 | INFO     | sufficient remaining disk space (29365370880 B)
[2025-10-12 22:12:59] 2025-10-13 02:11:58,702 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:12:59] 2025-10-13 02:11:58,703 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:12:59] 2025-10-13 02:11:58,703 | INFO     | update_server=False
[2025-10-12 22:12:59] 2025-10-13 02:11:58,703 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:12:59] 2025-10-13 02:11:58,703 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:12:59] 2025-10-13 02:11:58,704 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:12:59] 2025-10-13 02:11:58,704 | INFO     | aborting loop
[2025-10-12 22:12:59] 2025-10-13 02:11:58,995 | INFO     | all data control threads have been joined
[2025-10-12 22:12:59] 2025-10-13 02:11:59,600 | INFO     | all payload control threads have been joined
[2025-10-12 22:12:59] 2025-10-13 02:11:59,706 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:12:59] 2025-10-13 02:11:59,708 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:12:59] 2025-10-13 02:11:59,710 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:12:59] 2025-10-13 02:11:59,781 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:12:59] 2025-10-13 02:11:59,869 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:12:59] 2025-10-13 02:12:00,000 | INFO     | [data] control thread has finished
[2025-10-12 22:12:59] 2025-10-13 02:12:00,066 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:12:59] 2025-10-13 02:12:00,141 | INFO     | all job control threads have been joined
[2025-10-12 22:12:59] 2025-10-13 02:12:00,414 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:12:59] 2025-10-13 02:12:00,452 | INFO     | [job] validate thread has finished
[2025-10-12 22:12:59] 2025-10-13 02:12:00,605 | INFO     | [payload] control thread has finished
[2025-10-12 22:12:59] 2025-10-13 02:12:00,773 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:12:59] 2025-10-13 02:12:00,906 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:12:59] 2025-10-13 02:12:01,143 | INFO     | [job] control thread has finished
[2025-10-12 22:12:59] 2025-10-13 02:12:01,269 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:12:59] 2025-10-13 02:12:01,874 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:12:59] 2025-10-13 02:12:02,102 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:12:59] 2025-10-13 02:12:06,108 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:12:59] 2025-10-13 02:12:08,801 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:12:59] 2025-10-13 02:12:09,806 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:12:59] 2025-10-13 02:12:28,965 | INFO     | PID=22463 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 22:12:59] 2025-10-13 02:12:28,965 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:12:59] 2025-10-13 02:12:28,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:12:59] 2025-10-13 02:12:28,965 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:12:59] 2025-10-13 02:12:52,412 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:12:59] 2025-10-13 02:12:54,513 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140060091647808)>', '<ExcThread(monitor, started 140059781080832)>']
[2025-10-12 22:12:59] 2025-10-13 02:12:55,098 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:12:59] 2025-10-13 02:12:55,098 | INFO     | [monitor] control thread has ended
[2025-10-12 22:12:59] 2025-10-13 02:12:59,538 | INFO     | all workflow threads have been joined
[2025-10-12 22:12:59] 2025-10-13 02:12:59,538 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:12:59] 2025-10-13 02:12:59,539 | INFO     | traces error code: 0
[2025-10-12 22:12:59] 2025-10-13 02:12:59,539 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:12:59] 2025-10-13 02:12:59,627 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:12:59] 2025-10-13 02:12:59,631 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:12:59] 2025-10-13 02:12:59,634 [wrapper] pilotpid: 22463
[2025-10-12 22:12:59] 2025-10-13 02:12:59,638 [wrapper] Pilot exit status: 0
[2025-10-12 22:12:59] 2025-10-13 02:12:59,653 [wrapper] pandaids: 6840749346
[2025-10-12 22:12:59] 2025-10-13 02:12:59,702 [wrapper] cleanup supervisor_pilot  7725 22464
[2025-10-12 22:12:59] 2025-10-13 02:12:59,706 [wrapper] Test setup, not cleaning
[2025-10-12 22:12:59] 2025-10-13 02:12:59,710 [wrapper] apfmon messages muted
[2025-10-12 22:12:59] 2025-10-13 02:12:59,714 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:12:59] 2025-10-13 02:12:59,718 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:12:59]  *** Error codes and diagnostics ***
[2025-10-12 22:12:59]     "exeErrorCode": 0,
[2025-10-12 22:12:59]     "exeErrorDiag": "",
[2025-10-12 22:12:59]     "pilotErrorCode": 0,
[2025-10-12 22:12:59]     "pilotErrorDiag": "",
[2025-10-12 22:12:59]  *** Listing of results directory ***
[2025-10-12 22:12:59] total 410100
[2025-10-12 22:12:59] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 16:23 pilot3.tar.gz
[2025-10-12 22:12:59] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 16:38 queuedata.json
[2025-10-12 22:12:59] -rwx------ 1 boincer umatlas     36292 Oct 12 16:38 runpilot2-wrapper.sh
[2025-10-12 22:12:59] -rw-r--r-- 1 boincer umatlas       100 Oct 12 20:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:12:59] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 20:55 run_atlas
[2025-10-12 22:12:59] -rw-r--r-- 1 boincer umatlas       105 Oct 12 20:55 job.xml
[2025-10-12 22:12:59] -rw-r--r-- 2 boincer umatlas 221309483 Oct 12 20:55 EVNT.46676267._004854.pool.root.1
[2025-10-12 22:12:59] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:55 start_atlas.sh
[2025-10-12 22:12:59] drwxrwx--x 2 boincer umatlas      4096 Oct 12 20:55 shared
[2025-10-12 22:12:59] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 20:55 input.tar.gz
[2025-10-12 22:12:59] -rw-r--r-- 1 boincer umatlas         0 Oct 12 20:55 boinc_lockfile
[2025-10-12 22:12:59] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 20:55 pandaJob.out
[2025-10-12 22:12:59] -rw------- 1 boincer umatlas    975603 Oct 12 20:55 agis_schedconf.cvmfs.json
[2025-10-12 22:12:59] -rw------- 1 boincer umatlas   1560580 Oct 12 20:55 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:12:59] drwx------ 5 boincer umatlas      4096 Oct 12 20:55 pilot3
[2025-10-12 22:12:59] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 22:09 init_data.xml
[2025-10-12 22:12:59] -rw-r--r-- 1 boincer umatlas       530 Oct 12 22:11 boinc_task_state.xml
[2025-10-12 22:12:59] -rw------- 1 boincer umatlas 192645879 Oct 12 22:11 HITS.46676269._088867.pool.root.1
[2025-10-12 22:12:59] -rw------- 1 boincer umatlas        95 Oct 12 22:11 pilot_heartbeat.json
[2025-10-12 22:12:59] -rw------- 1 boincer umatlas      1051 Oct 12 22:11 memory_monitor_summary.json
[2025-10-12 22:12:59] -rw------- 1 boincer umatlas    380914 Oct 12 22:11 log.46676269._088867.job.log.tgz.1
[2025-10-12 22:12:59] -rw------- 1 boincer umatlas      7857 Oct 12 22:11 heartbeat.json
[2025-10-12 22:12:59] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 22:12 boinc_mmap_file
[2025-10-12 22:12:59] -rw-r--r-- 1 boincer umatlas        27 Oct 12 22:12 wrapper_checkpoint.txt
[2025-10-12 22:12:59] -rw------- 1 boincer umatlas      4818 Oct 12 22:12 pilotlog.txt
[2025-10-12 22:12:59] -rw------- 1 boincer umatlas    663146 Oct 12 22:12 log.46676269._088867.job.log.1
[2025-10-12 22:12:59] -rw------- 1 boincer umatlas       357 Oct 12 22:12 output.list
[2025-10-12 22:12:59] -rw-r--r-- 1 boincer umatlas       620 Oct 12 22:12 runtime_log
[2025-10-12 22:12:59] -rw------- 1 boincer umatlas   1064960 Oct 12 22:12 result.tar.gz
[2025-10-12 22:12:59] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 22:12 runtime_log.err
[2025-10-12 22:12:59] -rw------- 1 boincer umatlas       659 Oct 12 22:12 EDjKDmh0HS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmgyUMDmZRcw7m.diag
[2025-10-12 22:12:59] -rw-r--r-- 1 boincer umatlas     22037 Oct 12 22:12 stderr.txt
[2025-10-12 22:12:59] HITS file was successfully produced:
[2025-10-12 22:12:59] -rw------- 1 boincer umatlas 192645879 Oct 12 22:11 shared/HITS.pool.root.1
[2025-10-12 22:12:59]  *** Contents of shared directory: ***
[2025-10-12 22:12:59] total 405876
[2025-10-12 22:12:59] -rw-r--r-- 2 boincer umatlas 221309483 Oct 12 20:55 ATLAS.root_0
[2025-10-12 22:12:59] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:55 start_atlas.sh
[2025-10-12 22:12:59] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 20:55 input.tar.gz
[2025-10-12 22:12:59] -rw------- 1 boincer umatlas 192645879 Oct 12 22:11 HITS.pool.root.1
[2025-10-12 22:12:59] -rw------- 1 boincer umatlas   1064960 Oct 12 22:12 result.tar.gz
22:13:01 (18715): run_atlas exited; CPU time 46453.567893
22:13:01 (18715): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN