Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:10:56 (2421915): wrapper (7.7.26015): starting
21:10:56 (2421915): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 21:10:56] Arguments: --nthreads 9
[2025-10-12 21:10:56] Threads: 9
[2025-10-12 21:10:56] Checking for CVMFS
[2025-10-12 21:10:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:10:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:10:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:10:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:10:56] 2.13.2.0 189278 123626 207028 151642 2 272 34031073 40960000 8317 16776704 0 103933336 99.786 68525363 41726 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 21:10:56] CVMFS is ok
[2025-10-12 21:10:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:10:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:10:56] Further information can be found at the LHC@home message board.
[2025-10-12 21:10:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:10:56] Checking for apptainer binary...
[2025-10-12 21:10:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:10:56] Running /usr/bin/apptainer --version
[2025-10-12 21:10:56] apptainer version 1.4.3-1.el9
[2025-10-12 21:10:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:10:56] c-210-31-1.aglt2.org
[2025-10-12 21:10:56] apptainer works
[2025-10-12 21:10:56] Set ATHENA_PROC_NUMBER=9
[2025-10-12 21:10:56] Set ATHENA_CORE_NUMBER=9
[2025-10-12 21:10:56] Starting ATLAS job with PandaID=6840749513
[2025-10-12 21:10:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:38:28]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:38:28] 2025-10-13 03:37:30,905 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:38:28] 2025-10-13 03:37:30,905 | INFO     | sum of square deviations: 925824161.993055
[2025-10-12 23:38:28] 2025-10-13 03:37:30,906 | INFO     | sum of deviations: 14186341172.63193
[2025-10-12 23:38:28] 2025-10-13 03:37:30,906 | INFO     | mean x: 1760322256.6180556
[2025-10-12 23:38:28] 2025-10-13 03:37:30,906 | INFO     | mean y: 2520068.7569444445
[2025-10-12 23:38:28] 2025-10-13 03:37:30,906 | INFO     | -- intersect: -26970779107.62424
[2025-10-12 23:38:28] 2025-10-13 03:37:30,907 | INFO     | intersect: -26970779107.62424
[2025-10-12 23:38:28] 2025-10-13 03:37:30,907 | INFO     | chi2: 2.0226279890762067
[2025-10-12 23:38:28] 2025-10-13 03:37:30,907 | INFO     | sum of square deviations: 832692716.9208624
[2025-10-12 23:38:28] 2025-10-13 03:37:30,908 | INFO     | sum of deviations: 22421572721.856113
[2025-10-12 23:38:28] 2025-10-13 03:37:30,908 | INFO     | mean x: 1760322104.122302
[2025-10-12 23:38:28] 2025-10-13 03:37:30,908 | INFO     | mean y: 2533124.9496402876
[2025-10-12 23:38:28] 2025-10-13 03:37:30,908 | INFO     | -- intersect: -47396932811.79884
[2025-10-12 23:38:28] 2025-10-13 03:37:30,908 | INFO     | intersect: -47396932811.79884
[2025-10-12 23:38:28] 2025-10-13 03:37:30,908 | INFO     | chi2: 1.330626028014195
[2025-10-12 23:38:28] 2025-10-13 03:37:30,908 | INFO     | current chi2=1.330626028014195 (change=34.21301221971467 %)
[2025-10-12 23:38:28] 2025-10-13 03:37:30,909 | INFO     | sum of square deviations: 746009915.8208939
[2025-10-12 23:38:28] 2025-10-13 03:37:30,912 | INFO     | sum of deviations: 21241826385.059692
[2025-10-12 23:38:28] 2025-10-13 03:37:30,913 | INFO     | mean x: 1760321951.6119404
[2025-10-12 23:38:28] 2025-10-13 03:37:30,913 | INFO     | mean y: 2531050.962686567
[2025-10-12 23:38:28] 2025-10-13 03:37:30,913 | INFO     | -- intersect: -50120734719.311165
[2025-10-12 23:38:28] 2025-10-13 03:37:30,913 | INFO     | intersect: -50120734719.311165
[2025-10-12 23:38:28] 2025-10-13 03:37:30,913 | INFO     | chi2: 1.3320035830886887
[2025-10-12 23:38:28] 2025-10-13 03:37:30,913 | INFO     | current chi2=1.3320035830886887 (change=-0.10352683965978816 %)
[2025-10-12 23:38:28] 2025-10-13 03:37:30,913 | INFO     | right removable region: 133
[2025-10-12 23:38:28] 2025-10-13 03:37:30,913 | INFO     | sum of square deviations: 832682346.9208624
[2025-10-12 23:38:28] 2025-10-13 03:37:30,914 | INFO     | sum of deviations: -6444828085.014387
[2025-10-12 23:38:28] 2025-10-13 03:37:30,914 | INFO     | mean x: 1760322409.122302
[2025-10-12 23:38:28] 2025-10-13 03:37:30,914 | INFO     | mean y: 2553299.294964029
[2025-10-12 23:38:28] 2025-10-13 03:37:30,914 | INFO     | -- intersect: 13627166986.547562
[2025-10-12 23:38:28] 2025-10-13 03:37:30,914 | INFO     | intersect: 13627166986.547562
[2025-10-12 23:38:28] 2025-10-13 03:37:30,915 | INFO     | chi2: 0.7215000834305805
[2025-10-12 23:38:28] 2025-10-13 03:37:30,915 | INFO     | current chi2=0.7215000834305805 (change=64.32858205625294 %)
[2025-10-12 23:38:28] 2025-10-13 03:37:30,915 | INFO     | sum of square deviations: 746014003.5895548
[2025-10-12 23:38:28] 2025-10-13 03:37:30,923 | INFO     | sum of deviations: -5822619813.410448
[2025-10-12 23:38:28] 2025-10-13 03:37:30,923 | INFO     | mean x: 1760322561.619403
[2025-10-12 23:38:28] 2025-10-13 03:37:30,923 | INFO     | mean y: 2552258.619402985
[2025-10-12 23:38:28] 2025-10-13 03:37:30,923 | INFO     | -- intersect: 13741823875.453272
[2025-10-12 23:38:28] 2025-10-13 03:37:30,923 | INFO     | intersect: 13741823875.453272
[2025-10-12 23:38:28] 2025-10-13 03:37:30,924 | INFO     | chi2: 0.7158261247295828
[2025-10-12 23:38:28] 2025-10-13 03:37:30,924 | INFO     | current chi2=0.7158261247295828 (change=0.7864113714331331 %)
[2025-10-12 23:38:28] 2025-10-13 03:37:30,924 | INFO     | left removable region: 20
[2025-10-12 23:38:28] 2025-10-13 03:37:30,924 | INFO     | sum of square deviations: 447354491.929203
[2025-10-12 23:38:28] 2025-10-13 03:37:30,925 | INFO     | sum of deviations: 1164222184.8318584
[2025-10-12 23:38:28] 2025-10-13 03:37:30,925 | INFO     | mean x: 1760322531.097345
[2025-10-12 23:38:28] 2025-10-13 03:37:30,925 | INFO     | mean y: 2568751.1061946903
[2025-10-12 23:38:28] 2025-10-13 03:37:30,925 | INFO     | -- intersect: -4578600277.34123
[2025-10-12 23:38:28] 2025-10-13 03:37:30,925 | INFO     | intersect: -4578600277.34123
[2025-10-12 23:38:28] 2025-10-13 03:37:30,926 | INFO     | chi2: 0.000487711920349306
[2025-10-12 23:38:28] 2025-10-13 03:37:30,926 | INFO     | -- intersect: -4578600277.34123
[2025-10-12 23:38:28] 2025-10-13 03:37:30,926 | INFO     | current memory leak: 2.60 B/s (using 113 data points, chi2=0.00)
[2025-10-12 23:38:28] 2025-10-13 03:37:30,926 | INFO     | could have reported an average CPU frequency of 2571 MHz (8 samples)
[2025-10-12 23:38:28] 2025-10-13 03:37:30,927 | INFO     | ..............................
[2025-10-12 23:38:28] 2025-10-13 03:37:30,927 | INFO     | . Timing measurements:
[2025-10-12 23:38:28] 2025-10-13 03:37:30,927 | INFO     | . get job = 0 s
[2025-10-12 23:38:28] 2025-10-13 03:37:30,927 | INFO     | . initial setup = 2 s
[2025-10-12 23:38:28] 2025-10-13 03:37:30,927 | INFO     | . payload setup = 6 s
[2025-10-12 23:38:28] 2025-10-13 03:37:30,927 | INFO     | . stage-in = 0 s
[2025-10-12 23:38:28] 2025-10-13 03:37:30,927 | INFO     | . payload execution = 8746 s
[2025-10-12 23:38:28] 2025-10-13 03:37:30,927 | INFO     | . stage-out = 1 s
[2025-10-12 23:38:28] 2025-10-13 03:37:30,927 | INFO     | . log creation = 0 s
[2025-10-12 23:38:28] 2025-10-13 03:37:30,927 | INFO     | ..............................
[2025-10-12 23:38:28] 2025-10-13 03:37:31,160 | INFO     | time since job start (8783s) is within the limit (172800.0s)
[2025-10-12 23:38:28] 2025-10-13 03:37:31,457 | INFO     | 
[2025-10-12 23:38:28] 2025-10-13 03:37:31,457 | INFO     | job summary report
[2025-10-12 23:38:28] 2025-10-13 03:37:31,457 | INFO     | --------------------------------------------------
[2025-10-12 23:38:28] 2025-10-13 03:37:31,457 | INFO     | PanDA job id: 6840749513
[2025-10-12 23:38:28] 2025-10-13 03:37:31,458 | INFO     | task id: 46676269
[2025-10-12 23:38:28] 2025-10-13 03:37:31,458 | INFO     | errors: (none)
[2025-10-12 23:38:28] 2025-10-13 03:37:31,458 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:38:28] 2025-10-13 03:37:31,458 | INFO     | pilot state: finished 
[2025-10-12 23:38:28] 2025-10-13 03:37:31,458 | INFO     | transexitcode: 0
[2025-10-12 23:38:28] 2025-10-13 03:37:31,458 | INFO     | exeerrorcode: 0
[2025-10-12 23:38:28] 2025-10-13 03:37:31,458 | INFO     | exeerrordiag: 
[2025-10-12 23:38:28] 2025-10-13 03:37:31,458 | INFO     | exitcode: 0
[2025-10-12 23:38:28] 2025-10-13 03:37:31,458 | INFO     | exitmsg: OK
[2025-10-12 23:38:28] 2025-10-13 03:37:31,458 | INFO     | cpuconsumptiontime: 45673 s
[2025-10-12 23:38:28] 2025-10-13 03:37:31,458 | INFO     | nevents: 400
[2025-10-12 23:38:28] 2025-10-13 03:37:31,458 | INFO     | neventsw: 0
[2025-10-12 23:38:28] 2025-10-13 03:37:31,458 | INFO     | pid: 2439680
[2025-10-12 23:38:28] 2025-10-13 03:37:31,459 | INFO     | pgrp: 2439680
[2025-10-12 23:38:28] 2025-10-13 03:37:31,459 | INFO     | corecount: 9
[2025-10-12 23:38:28] 2025-10-13 03:37:31,459 | INFO     | event service: False
[2025-10-12 23:38:28] 2025-10-13 03:37:31,459 | INFO     | sizes: {0: 2348743, 1: 2348885, 6: 2349147, 11: 2349175, 8756: 2377467, 8758: 2386649, 8767: 2386787}
[2025-10-12 23:38:28] 2025-10-13 03:37:31,459 | INFO     | --------------------------------------------------
[2025-10-12 23:38:28] 2025-10-13 03:37:31,459 | INFO     | 
[2025-10-12 23:38:28] 2025-10-13 03:37:31,459 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 23:38:28] 2025-10-13 03:37:31,532 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:38:28] 2025-10-13 03:37:31,532 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:38:28] 2025-10-13 03:37:31,532 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:38:28] 2025-10-13 03:37:31,533 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:38:28] 2025-10-13 03:37:31,533 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:38:28] 2025-10-13 03:37:31,533 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:38:28] 2025-10-13 03:37:31,533 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:38:28] 2025-10-13 03:37:31,533 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:38:28] 2025-10-13 03:37:31,533 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:38:28] 2025-10-13 03:37:31,533 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:38:28] 2025-10-13 03:37:31,533 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:38:28] 2025-10-13 03:37:31,533 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:38:28] 2025-10-13 03:37:31,533 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:38:28] 2025-10-13 03:37:31,533 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:38:28] 2025-10-13 03:37:31,533 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:38:28] 2025-10-13 03:37:31,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:38:28] 2025-10-13 03:37:31,534 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:38:28] 2025-10-13 03:37:31,534 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:38:28] 2025-10-13 03:37:31,534 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:38:28] 2025-10-13 03:37:31,534 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:38:28] 2025-10-13 03:37:31,534 | INFO     | job 6840749513 has completed (purged errors)
[2025-10-12 23:38:28] 2025-10-13 03:37:31,534 | INFO     | overall cleanup function is called
[2025-10-12 23:38:28] 2025-10-13 03:37:32,543 | INFO     | --- collectZombieJob: --- 10, [2439680]
[2025-10-12 23:38:28] 2025-10-13 03:37:32,544 | INFO     | zombie collector waiting for pid 2439680
[2025-10-12 23:38:28] 2025-10-13 03:37:32,544 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:38:28] 2025-10-13 03:37:32,544 | INFO     | collected zombie processes
[2025-10-12 23:38:28] 2025-10-13 03:37:32,544 | INFO     | will attempt to kill all subprocesses of pid=2439680
[2025-10-12 23:38:28] 2025-10-13 03:37:32,776 | INFO     | process IDs to be killed: [2439680] (in reverse order)
[2025-10-12 23:38:28] 2025-10-13 03:37:32,915 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:38:28] 2025-10-13 03:37:32,915 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:38:28] 2025-10-13 03:37:32,926 | INFO     | did not find any defunct processes belonging to 2439680
[2025-10-12 23:38:28] 2025-10-13 03:37:32,938 | INFO     | did not find any defunct processes belonging to 2439680
[2025-10-12 23:38:28] 2025-10-13 03:37:32,939 | INFO     | ready for new job
[2025-10-12 23:38:28] 2025-10-13 03:37:32,939 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:38:28] 2025-10-13 03:37:32,941 | INFO     | ***************************************
[2025-10-12 23:38:28] 2025-10-13 03:37:32,941 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:38:28] 2025-10-13 03:37:32,941 | INFO     | ***************************************
[2025-10-12 23:38:28] 2025-10-13 03:37:32,941 | INFO     | 
[2025-10-12 23:38:28] 2025-10-13 03:37:32,945 | INFO     | architecture information:
[2025-10-12 23:38:28] 2025-10-13 03:37:32,946 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:38:28] 2025-10-13 03:37:32,972 | INFO     | cat /etc/os-release:
[2025-10-12 23:38:28] NAME="CentOS Linux"
[2025-10-12 23:38:28] VERSION="7 (Core)"
[2025-10-12 23:38:28] ID="centos"
[2025-10-12 23:38:28] ID_LIKE="rhel fedora"
[2025-10-12 23:38:28] VERSION_ID="7"
[2025-10-12 23:38:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:38:28] ANSI_COLOR="0;31"
[2025-10-12 23:38:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:38:28] HOME_URL="https://www.centos.org/"
[2025-10-12 23:38:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:38:28] 
[2025-10-12 23:38:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:38:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:38:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:38:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:38:28] 
[2025-10-12 23:38:28] 2025-10-13 03:37:32,973 | INFO     | ***************************************
[2025-10-12 23:38:28] 2025-10-13 03:37:33,476 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 23:38:28] 2025-10-13 03:37:33,504 | INFO     | sufficient remaining disk space (74260152320 B)
[2025-10-12 23:38:28] 2025-10-13 03:37:33,504 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:38:28] 2025-10-13 03:37:33,505 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:38:28] 2025-10-13 03:37:33,505 | INFO     | update_server=False
[2025-10-12 23:38:28] 2025-10-13 03:37:33,505 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:38:28] 2025-10-13 03:37:33,698 | INFO     | all job control threads have been joined
[2025-10-12 23:38:28] 2025-10-13 03:37:33,747 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 23:38:28] 2025-10-13 03:37:33,748 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 23:38:28] 2025-10-13 03:37:33,748 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:38:28] 2025-10-13 03:37:33,748 | INFO     | will abort loop
[2025-10-12 23:38:28] 2025-10-13 03:37:33,864 | INFO     | all data control threads have been joined
[2025-10-12 23:38:28] 2025-10-13 03:37:34,301 | INFO     | all payload control threads have been joined
[2025-10-12 23:38:28] 2025-10-13 03:37:34,512 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:38:28] 2025-10-13 03:37:34,576 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:38:28] 2025-10-13 03:37:34,602 | INFO     | [job] validate thread has finished
[2025-10-12 23:38:28] 2025-10-13 03:37:34,705 | INFO     | [job] control thread has finished
[2025-10-12 23:38:28] 2025-10-13 03:37:34,732 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:38:28] 2025-10-13 03:37:34,754 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:38:28] 2025-10-13 03:37:34,755 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:38:28] 2025-10-13 03:37:34,776 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:38:28] 2025-10-13 03:37:34,789 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:38:28] 2025-10-13 03:37:34,874 | INFO     | [data] control thread has finished
[2025-10-12 23:38:28] 2025-10-13 03:37:35,307 | INFO     | [payload] control thread has finished
[2025-10-12 23:38:28] 2025-10-13 03:37:35,652 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:38:28] 2025-10-13 03:37:35,766 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:38:28] 2025-10-13 03:37:35,969 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:38:28] 2025-10-13 03:37:36,022 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:38:28] 2025-10-13 03:37:36,783 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:38:28] 2025-10-13 03:37:36,973 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:38:28] 2025-10-13 03:37:37,027 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:38:28] 2025-10-13 03:37:40,982 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:38:28] 2025-10-13 03:38:04,652 | INFO     | PID=2426614 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:38:28] 2025-10-13 03:38:04,652 | INFO     | .. there are 10 such processes running
[2025-10-12 23:38:28] 2025-10-13 03:38:04,652 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:38:28] 2025-10-13 03:38:04,652 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:38:28] 2025-10-13 03:38:04,653 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:38:28] 2025-10-13 03:38:22,514 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:38:28] 2025-10-13 03:38:22,672 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140558412277568)>', '<ExcThread(monitor, started 140557569488640)>']
[2025-10-12 23:38:28] 2025-10-13 03:38:22,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:38:28] 2025-10-13 03:38:22,776 | INFO     | [monitor] control thread has ended
[2025-10-12 23:38:28] 2025-10-13 03:38:27,696 | INFO     | all workflow threads have been joined
[2025-10-12 23:38:28] 2025-10-13 03:38:27,697 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:38:28] 2025-10-13 03:38:27,697 | INFO     | traces error code: 0
[2025-10-12 23:38:28] 2025-10-13 03:38:27,697 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:38:28] 2025-10-13 03:38:27,876 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:38:28] 2025-10-13 03:38:27,881 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:38:28] 2025-10-13 03:38:27,884 [wrapper] pilotpid: 2426614
[2025-10-12 23:38:28] 2025-10-13 03:38:27,888 [wrapper] Pilot exit status: 0
[2025-10-12 23:38:28] 2025-10-13 03:38:27,904 [wrapper] pandaids: 6840749513
[2025-10-12 23:38:28] 2025-10-13 03:38:27,956 [wrapper] cleanup supervisor_pilot 2697093 2426615
[2025-10-12 23:38:28] 2025-10-13 03:38:27,960 [wrapper] Test setup, not cleaning
[2025-10-12 23:38:28] 2025-10-13 03:38:27,964 [wrapper] apfmon messages muted
[2025-10-12 23:38:28] 2025-10-13 03:38:27,967 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:38:28] 2025-10-13 03:38:27,970 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:38:28]  *** Error codes and diagnostics ***
[2025-10-12 23:38:28]     "exeErrorCode": 0,
[2025-10-12 23:38:28]     "exeErrorDiag": "",
[2025-10-12 23:38:28]     "pilotErrorCode": 0,
[2025-10-12 23:38:28]     "pilotErrorDiag": "",
[2025-10-12 23:38:28]  *** Listing of results directory ***
[2025-10-12 23:38:28] total 410560
[2025-10-12 23:38:28] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 16:23 pilot3.tar.gz
[2025-10-12 23:38:28] -rwx------. 1 boincer umatlas     36292 Oct 12 16:42 runpilot2-wrapper.sh
[2025-10-12 23:38:28] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:42 queuedata.json
[2025-10-12 23:38:28] -rw-r--r--. 1 boincer umatlas       100 Oct 12 21:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:38:28] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 21:10 run_atlas
[2025-10-12 23:38:28] -rw-r--r--. 1 boincer umatlas       105 Oct 12 21:10 job.xml
[2025-10-12 23:38:28] -rw-r--r--. 2 boincer umatlas 217717795 Oct 12 21:10 EVNT.46676267._004857.pool.root.1
[2025-10-12 23:38:28] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 21:10 start_atlas.sh
[2025-10-12 23:38:28] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 21:10 shared
[2025-10-12 23:38:28] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 21:10 input.tar.gz
[2025-10-12 23:38:28] -rw-r--r--. 1 boincer umatlas         0 Oct 12 21:10 boinc_lockfile
[2025-10-12 23:38:28] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 21:10 pandaJob.out
[2025-10-12 23:38:28] -rw-------. 1 boincer umatlas    975603 Oct 12 21:11 agis_schedconf.cvmfs.json
[2025-10-12 23:38:28] -rw-------. 1 boincer umatlas   1560580 Oct 12 21:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:38:28] drwx------. 5 boincer umatlas      4096 Oct 12 21:11 pilot3
[2025-10-12 23:38:28] -rw-r--r--. 1 boincer umatlas      6840 Oct 12 23:36 init_data.xml
[2025-10-12 23:38:28] -rw-------. 1 boincer umatlas 195534892 Oct 12 23:36 HITS.46676269._088945.pool.root.1
[2025-10-12 23:38:28] -rw-r--r--. 1 boincer umatlas       529 Oct 12 23:36 boinc_task_state.xml
[2025-10-12 23:38:28] -rw-------. 1 boincer umatlas        95 Oct 12 23:37 pilot_heartbeat.json
[2025-10-12 23:38:28] -rw-------. 1 boincer umatlas      1043 Oct 12 23:37 memory_monitor_summary.json
[2025-10-12 23:38:28] -rw-------. 1 boincer umatlas    399936 Oct 12 23:37 log.46676269._088945.job.log.tgz.1
[2025-10-12 23:38:28] -rw-------. 1 boincer umatlas      7824 Oct 12 23:37 heartbeat.json
[2025-10-12 23:38:28] -rw-r--r--. 1 boincer umatlas        27 Oct 12 23:38 wrapper_checkpoint.txt
[2025-10-12 23:38:28] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:38 boinc_mmap_file
[2025-10-12 23:38:28] -rw-------. 1 boincer umatlas      5010 Oct 12 23:38 pilotlog.txt
[2025-10-12 23:38:28] -rw-------. 1 boincer umatlas   1228005 Oct 12 23:38 log.46676269._088945.job.log.1
[2025-10-12 23:38:28] -rw-------. 1 boincer umatlas       357 Oct 12 23:38 output.list
[2025-10-12 23:38:28] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:38 runtime_log
[2025-10-12 23:38:28] -rw-------. 1 boincer umatlas   1648640 Oct 12 23:38 result.tar.gz
[2025-10-12 23:38:28] -rw-------. 1 boincer umatlas       654 Oct 12 23:38 tVDNDmr4HS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmazUMDmjdV9rm.diag
[2025-10-12 23:38:28] -rw-r--r--. 1 boincer umatlas      8713 Oct 12 23:38 runtime_log.err
[2025-10-12 23:38:28] -rw-r--r--. 1 boincer umatlas     21011 Oct 12 23:38 stderr.txt
[2025-10-12 23:38:28] HITS file was successfully produced:
[2025-10-12 23:38:28] -rw-------. 1 boincer umatlas 195534892 Oct 12 23:36 shared/HITS.pool.root.1
[2025-10-12 23:38:28]  *** Contents of shared directory: ***
[2025-10-12 23:38:28] total 405764
[2025-10-12 23:38:28] -rw-r--r--. 2 boincer umatlas 217717795 Oct 12 21:10 ATLAS.root_0
[2025-10-12 23:38:28] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 21:10 start_atlas.sh
[2025-10-12 23:38:28] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 21:10 input.tar.gz
[2025-10-12 23:38:28] -rw-------. 1 boincer umatlas 195534892 Oct 12 23:36 HITS.pool.root.1
[2025-10-12 23:38:28] -rw-------. 1 boincer umatlas   1648640 Oct 12 23:38 result.tar.gz
23:38:30 (2421915): run_atlas exited; CPU time 45860.023956
23:38:30 (2421915): called boinc_finish(0)

</stderr_txt>
]]>

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