Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:47:09 (21224): wrapper (7.7.26015): starting
20:47:09 (21224): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:47:09] Arguments: --nthreads 8
[2025-10-12 20:47:09] Threads: 8
[2025-10-12 20:47:09] Checking for CVMFS
[2025-10-12 20:47:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:47:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:47:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:47:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:47:10] 2.11.2.0 2934 112763 84444 151642 2 59 15322804 20275201 1 130560 1 50714453 99.986 3881625 21354 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 20:47:10] CVMFS is ok
[2025-10-12 20:47:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:47:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:47:10] Further information can be found at the LHC@home message board.
[2025-10-12 20:47:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:47:10] Checking for apptainer binary...
[2025-10-12 20:47:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:47:10] Running /usr/bin/apptainer --version
[2025-10-12 20:47:10] apptainer version 1.3.2-1.el7
[2025-10-12 20:47:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:47:11] c-204-33.aglt2.org
[2025-10-12 20:47:11] apptainer works
[2025-10-12 20:47:11] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:47:11] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:47:11] Starting ATLAS job with PandaID=6840749306
[2025-10-12 20:47:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:56:46]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:56:46] 2025-10-13 02:55:58,576 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:56:46] 2025-10-13 02:56:00,517 | INFO     | time since job start (7712s) is within the limit (172800.0s)
[2025-10-12 22:56:46] 2025-10-13 02:56:01,079 | INFO     | monitor loop #567: job 0:6840749306 is in state 'finished'
[2025-10-12 22:56:46] 2025-10-13 02:56:01,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:56:46] 2025-10-13 02:56:02,308 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 22:56:46] 2025-10-13 02:56:02,312 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-10-12 22:56:46] 2025-10-13 02:56:02,314 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840749306/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:56:46] 2025-10-13 02:56:02,315 | INFO     | extracted standard info from prmon json
[2025-10-12 22:56:46] 2025-10-13 02:56:02,315 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:56:46] 2025-10-13 02:56:02,315 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:56:46] 2025-10-13 02:56:02,316 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:56:46] 2025-10-13 02:56:02,316 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:56:46] 2025-10-13 02:56:02,319 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:56:46] 2025-10-13 02:56:02,319 | INFO     | sum of square deviations: 620244187.5
[2025-10-12 22:56:46] 2025-10-13 02:56:02,320 | INFO     | sum of deviations: -63441616.50000252
[2025-10-12 22:56:46] 2025-10-13 02:56:02,320 | INFO     | mean x: 1760320291.5
[2025-10-12 22:56:46] 2025-10-13 02:56:02,320 | INFO     | mean y: 2517972.1507936507
[2025-10-12 22:56:46] 2025-10-13 02:56:02,320 | INFO     | -- intersect: 182572162.26041985
[2025-10-12 22:56:46] 2025-10-13 02:56:02,321 | INFO     | intersect: 182572162.26041985
[2025-10-12 22:56:46] 2025-10-13 02:56:02,321 | INFO     | chi2: 1.5269169319075953
[2025-10-12 22:56:46] 2025-10-13 02:56:02,321 | INFO     | sum of square deviations: 549294020.0
[2025-10-12 22:56:46] 2025-10-13 02:56:02,322 | INFO     | sum of deviations: 148771375.00000164
[2025-10-12 22:56:46] 2025-10-13 02:56:02,322 | INFO     | mean x: 1760320139.0
[2025-10-12 22:56:46] 2025-10-13 02:56:02,322 | INFO     | mean y: 2518428.5371900825
[2025-10-12 22:56:46] 2025-10-13 02:56:02,322 | INFO     | -- intersect: -474248545.03959125
[2025-10-12 22:56:46] 2025-10-13 02:56:02,323 | INFO     | intersect: -474248545.03959125
[2025-10-12 22:56:46] 2025-10-13 02:56:02,323 | INFO     | chi2: 1.5278371395327837
[2025-10-12 22:56:46] 2025-10-13 02:56:02,323 | INFO     | current chi2=1.5278371395327837 (change=-0.06026572932417358 %)
[2025-10-12 22:56:46] 2025-10-13 02:56:02,323 | INFO     | right removable region: 120
[2025-10-12 22:56:46] 2025-10-13 02:56:02,323 | INFO     | sum of square deviations: 549294020.0
[2025-10-12 22:56:46] 2025-10-13 02:56:02,324 | INFO     | sum of deviations: -18004885660.000008
[2025-10-12 22:56:46] 2025-10-13 02:56:02,324 | INFO     | mean x: 1760320444.0
[2025-10-12 22:56:46] 2025-10-13 02:56:02,324 | INFO     | mean y: 2555806.619834711
[2025-10-12 22:56:46] 2025-10-13 02:56:02,325 | INFO     | -- intersect: 57702743984.85714
[2025-10-12 22:56:46] 2025-10-13 02:56:02,325 | INFO     | intersect: 57702743984.85714
[2025-10-12 22:56:46] 2025-10-13 02:56:02,325 | INFO     | chi2: 0.1260843738376332
[2025-10-12 22:56:46] 2025-10-13 02:56:02,325 | INFO     | current chi2=0.1260843738376332 (change=91.74255185708665 %)
[2025-10-12 22:56:46] 2025-10-13 02:56:02,325 | INFO     | sum of square deviations: 483971865.0
[2025-10-12 22:56:46] 2025-10-13 02:56:02,326 | INFO     | sum of deviations: -16096404005.500002
[2025-10-12 22:56:46] 2025-10-13 02:56:02,326 | INFO     | mean x: 1760320596.5
[2025-10-12 22:56:46] 2025-10-13 02:56:02,326 | INFO     | mean y: 2551249.8189655175
[2025-10-12 22:56:46] 2025-10-13 02:56:02,326 | INFO     | -- intersect: 58548994854.48337
[2025-10-12 22:56:46] 2025-10-13 02:56:02,326 | INFO     | intersect: 58548994854.48337
[2025-10-12 22:56:46] 2025-10-13 02:56:02,327 | INFO     | chi2: 0.11498386549577996
[2025-10-12 22:56:46] 2025-10-13 02:56:02,327 | INFO     | current chi2=0.11498386549577996 (change=8.804031779662143 %)
[2025-10-12 22:56:46] 2025-10-13 02:56:02,327 | INFO     | left removable region: 20
[2025-10-12 22:56:46] 2025-10-13 02:56:02,327 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 22:56:46] 2025-10-13 02:56:02,328 | INFO     | sum of deviations: -7846437838.500001
[2025-10-12 22:56:46] 2025-10-13 02:56:02,328 | INFO     | mean x: 1760320718.5
[2025-10-12 22:56:46] 2025-10-13 02:56:02,328 | INFO     | mean y: 2531837.01
[2025-10-12 22:56:46] 2025-10-13 02:56:02,328 | INFO     | -- intersect: 44550648331.649765
[2025-10-12 22:56:46] 2025-10-13 02:56:02,328 | INFO     | intersect: 44550648331.649765
[2025-10-12 22:56:46] 2025-10-13 02:56:02,328 | INFO     | chi2: 0.08688281961122005
[2025-10-12 22:56:46] 2025-10-13 02:56:02,328 | INFO     | -- intersect: 44550648331.649765
[2025-10-12 22:56:46] 2025-10-13 02:56:02,329 | INFO     | current memory leak: -25.31 B/s (using 100 data points, chi2=0.09)
[2025-10-12 22:56:46] 2025-10-13 02:56:02,329 | INFO     | could have reported an average CPU frequency of 1978 MHz (8 samples)
[2025-10-12 22:56:46] 2025-10-13 02:56:02,329 | INFO     | ..............................
[2025-10-12 22:56:46] 2025-10-13 02:56:02,329 | INFO     | . Timing measurements:
[2025-10-12 22:56:46] 2025-10-13 02:56:02,329 | INFO     | . get job = 0 s
[2025-10-12 22:56:46] 2025-10-13 02:56:02,329 | INFO     | . initial setup = 2 s
[2025-10-12 22:56:46] 2025-10-13 02:56:02,330 | INFO     | . payload setup = 7 s
[2025-10-12 22:56:46] 2025-10-13 02:56:02,330 | INFO     | . stage-in = 0 s
[2025-10-12 22:56:46] 2025-10-13 02:56:02,330 | INFO     | . payload execution = 7672 s
[2025-10-12 22:56:46] 2025-10-13 02:56:02,330 | INFO     | . stage-out = 1 s
[2025-10-12 22:56:46] 2025-10-13 02:56:02,330 | INFO     | . log creation = 0 s
[2025-10-12 22:56:46] 2025-10-13 02:56:02,330 | INFO     | ..............................
[2025-10-12 22:56:46] 2025-10-13 02:56:02,420 | INFO     | 
[2025-10-12 22:56:46] 2025-10-13 02:56:02,421 | INFO     | job summary report
[2025-10-12 22:56:46] 2025-10-13 02:56:02,421 | INFO     | --------------------------------------------------
[2025-10-12 22:56:46] 2025-10-13 02:56:02,421 | INFO     | PanDA job id: 6840749306
[2025-10-12 22:56:46] 2025-10-13 02:56:02,421 | INFO     | task id: 46676269
[2025-10-12 22:56:46] 2025-10-13 02:56:02,421 | INFO     | errors: (none)
[2025-10-12 22:56:46] 2025-10-13 02:56:02,421 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:56:46] 2025-10-13 02:56:02,421 | INFO     | pilot state: finished 
[2025-10-12 22:56:46] 2025-10-13 02:56:02,422 | INFO     | transexitcode: 0
[2025-10-12 22:56:46] 2025-10-13 02:56:02,422 | INFO     | exeerrorcode: 0
[2025-10-12 22:56:46] 2025-10-13 02:56:02,422 | INFO     | exeerrordiag: 
[2025-10-12 22:56:46] 2025-10-13 02:56:02,422 | INFO     | exitcode: 0
[2025-10-12 22:56:46] 2025-10-13 02:56:02,422 | INFO     | exitmsg: OK
[2025-10-12 22:56:46] 2025-10-13 02:56:02,422 | INFO     | cpuconsumptiontime: 57476 s
[2025-10-12 22:56:46] 2025-10-13 02:56:02,422 | INFO     | nevents: 400
[2025-10-12 22:56:46] 2025-10-13 02:56:02,422 | INFO     | neventsw: 0
[2025-10-12 22:56:46] 2025-10-13 02:56:02,422 | INFO     | pid: 31344
[2025-10-12 22:56:46] 2025-10-13 02:56:02,423 | INFO     | pgrp: 31344
[2025-10-12 22:56:46] 2025-10-13 02:56:02,423 | INFO     | corecount: 8
[2025-10-12 22:56:46] 2025-10-13 02:56:02,423 | INFO     | event service: False
[2025-10-12 22:56:46] 2025-10-13 02:56:02,423 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 7684: 2376749, 7687: 2385747, 7689: 2385931, 7697: 2386125}
[2025-10-12 22:56:46] 2025-10-13 02:56:02,423 | INFO     | --------------------------------------------------
[2025-10-12 22:56:46] 2025-10-13 02:56:02,423 | INFO     | 
[2025-10-12 22:56:46] 2025-10-13 02:56:02,423 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 22:56:46] 2025-10-13 02:56:02,451 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:56:46] 2025-10-13 02:56:02,452 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:56:46] 2025-10-13 02:56:02,452 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:56:46] 2025-10-13 02:56:02,452 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:56:46] 2025-10-13 02:56:02,452 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:56:46] 2025-10-13 02:56:02,452 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:56:46] 2025-10-13 02:56:02,453 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:56:46] 2025-10-13 02:56:02,453 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:56:46] 2025-10-13 02:56:02,453 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:56:46] 2025-10-13 02:56:02,453 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:56:46] 2025-10-13 02:56:02,453 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:56:46] 2025-10-13 02:56:02,454 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:56:46] 2025-10-13 02:56:02,454 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:56:46] 2025-10-13 02:56:02,454 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:56:46] 2025-10-13 02:56:02,454 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:56:46] 2025-10-13 02:56:02,454 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:56:46] 2025-10-13 02:56:02,455 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:56:46] 2025-10-13 02:56:02,455 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:56:46] 2025-10-13 02:56:02,455 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:56:46] 2025-10-13 02:56:02,455 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:56:46] 2025-10-13 02:56:02,456 | INFO     | job 6840749306 has completed (purged errors)
[2025-10-12 22:56:46] 2025-10-13 02:56:02,456 | INFO     | overall cleanup function is called
[2025-10-12 22:56:46] 2025-10-13 02:56:03,464 | INFO     | --- collectZombieJob: --- 10, [31344]
[2025-10-12 22:56:46] 2025-10-13 02:56:03,464 | INFO     | zombie collector waiting for pid 31344
[2025-10-12 22:56:46] 2025-10-13 02:56:03,465 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:56:46] 2025-10-13 02:56:03,465 | INFO     | collected zombie processes
[2025-10-12 22:56:46] 2025-10-13 02:56:03,465 | INFO     | will attempt to kill all subprocesses of pid=31344
[2025-10-12 22:56:46] 2025-10-13 02:56:03,555 | INFO     | process IDs to be killed: [31344] (in reverse order)
[2025-10-12 22:56:46] 2025-10-13 02:56:03,611 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:56:46] 2025-10-13 02:56:03,612 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:56:46] 2025-10-13 02:56:03,616 | INFO     | did not find any defunct processes belonging to 31344
[2025-10-12 22:56:46] 2025-10-13 02:56:03,619 | INFO     | did not find any defunct processes belonging to 31344
[2025-10-12 22:56:46] 2025-10-13 02:56:03,619 | INFO     | ready for new job
[2025-10-12 22:56:46] 2025-10-13 02:56:03,620 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:56:46] 2025-10-13 02:56:03,621 | INFO     | ***************************************
[2025-10-12 22:56:46] 2025-10-13 02:56:03,621 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:56:46] 2025-10-13 02:56:03,622 | INFO     | ***************************************
[2025-10-12 22:56:46] 2025-10-13 02:56:03,622 | INFO     | 
[2025-10-12 22:56:46] 2025-10-13 02:56:03,622 | INFO     | architecture information:
[2025-10-12 22:56:46] 2025-10-13 02:56:03,623 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:56:46] 2025-10-13 02:56:03,639 | INFO     | cat /etc/os-release:
[2025-10-12 22:56:46] NAME="CentOS Linux"
[2025-10-12 22:56:46] VERSION="7 (Core)"
[2025-10-12 22:56:46] ID="centos"
[2025-10-12 22:56:46] ID_LIKE="rhel fedora"
[2025-10-12 22:56:46] VERSION_ID="7"
[2025-10-12 22:56:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:56:46] ANSI_COLOR="0;31"
[2025-10-12 22:56:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:56:46] HOME_URL="https://www.centos.org/"
[2025-10-12 22:56:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:56:46] 
[2025-10-12 22:56:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:56:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:56:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:56:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:56:46] 
[2025-10-12 22:56:46] 2025-10-13 02:56:03,640 | INFO     | ***************************************
[2025-10-12 22:56:46] 2025-10-13 02:56:04,143 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 22:56:46] 2025-10-13 02:56:04,163 | INFO     | sufficient remaining disk space (18577620992 B)
[2025-10-12 22:56:46] 2025-10-13 02:56:04,164 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:56:46] 2025-10-13 02:56:04,164 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:56:46] 2025-10-13 02:56:04,164 | INFO     | update_server=False
[2025-10-12 22:56:46] 2025-10-13 02:56:04,164 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:56:46] 2025-10-13 02:56:04,165 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:56:46] 2025-10-13 02:56:04,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:56:46] 2025-10-13 02:56:04,587 | INFO     | aborting loop
[2025-10-12 22:56:46] 2025-10-13 02:56:04,719 | INFO     | all payload control threads have been joined
[2025-10-12 22:56:46] 2025-10-13 02:56:04,887 | INFO     | all data control threads have been joined
[2025-10-12 22:56:46] 2025-10-13 02:56:05,095 | INFO     | all job control threads have been joined
[2025-10-12 22:56:46] 2025-10-13 02:56:05,170 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:56:46] 2025-10-13 02:56:05,170 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:56:46] 2025-10-13 02:56:05,309 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:56:46] 2025-10-13 02:56:05,371 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:56:46] 2025-10-13 02:56:05,393 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:56:46] 2025-10-13 02:56:05,474 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:56:46] 2025-10-13 02:56:05,585 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:56:46] 2025-10-13 02:56:05,592 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:56:46] 2025-10-13 02:56:05,728 | INFO     | [payload] control thread has finished
[2025-10-12 22:56:46] 2025-10-13 02:56:05,892 | INFO     | [data] control thread has finished
[2025-10-12 22:56:46] 2025-10-13 02:56:06,100 | INFO     | [job] control thread has finished
[2025-10-12 22:56:46] 2025-10-13 02:56:06,199 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:56:46] 2025-10-13 02:56:06,409 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:56:46] 2025-10-13 02:56:06,466 | INFO     | [job] validate thread has finished
[2025-10-12 22:56:46] 2025-10-13 02:56:06,467 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:56:46] 2025-10-13 02:56:06,612 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:56:46] 2025-10-13 02:56:07,480 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:56:46] 2025-10-13 02:56:09,315 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:56:46] 2025-10-13 02:56:33,722 | INFO     | PID=24891 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 22:56:46] 2025-10-13 02:56:33,723 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:56:46] 2025-10-13 02:56:33,723 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:56:46] 2025-10-13 02:56:33,723 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:56:46] 2025-10-13 02:56:40,557 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:56:46] 2025-10-13 02:56:41,546 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139929411561280)>', '<ExcThread(monitor, started 139928155453184)>']
[2025-10-12 22:56:46] 2025-10-13 02:56:41,757 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:56:46] 2025-10-13 02:56:41,757 | INFO     | [monitor] control thread has ended
[2025-10-12 22:56:46] 2025-10-13 02:56:46,561 | INFO     | all workflow threads have been joined
[2025-10-12 22:56:46] 2025-10-13 02:56:46,561 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:56:46] 2025-10-13 02:56:46,562 | INFO     | traces error code: 0
[2025-10-12 22:56:46] 2025-10-13 02:56:46,562 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:56:46] 2025-10-13 02:56:46,664 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:56:46] 2025-10-13 02:56:46,668 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:56:46] 2025-10-13 02:56:46,672 [wrapper] pilotpid: 24891
[2025-10-12 22:56:46] 2025-10-13 02:56:46,677 [wrapper] Pilot exit status: 0
[2025-10-12 22:56:46] 2025-10-13 02:56:46,693 [wrapper] pandaids: 6840749306
[2025-10-12 22:56:46] 2025-10-13 02:56:46,741 [wrapper] cleanup supervisor_pilot 20625 24892
[2025-10-12 22:56:46] 2025-10-13 02:56:46,745 [wrapper] Test setup, not cleaning
[2025-10-12 22:56:46] 2025-10-13 02:56:46,750 [wrapper] apfmon messages muted
[2025-10-12 22:56:46] 2025-10-13 02:56:46,755 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:56:46] 2025-10-13 02:56:46,759 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:56:46]  *** Error codes and diagnostics ***
[2025-10-12 22:56:46]     "exeErrorCode": 0,
[2025-10-12 22:56:46]     "exeErrorDiag": "",
[2025-10-12 22:56:46]     "pilotErrorCode": 0,
[2025-10-12 22:56:46]     "pilotErrorDiag": "",
[2025-10-12 22:56:46]  *** Listing of results directory ***
[2025-10-12 22:56:46] total 419452
[2025-10-12 22:56:46] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 16:23 pilot3.tar.gz
[2025-10-12 22:56:46] -rwx------ 1 boincer umatlas     36292 Oct 12 16:35 runpilot2-wrapper.sh
[2025-10-12 22:56:46] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 16:35 queuedata.json
[2025-10-12 22:56:46] -rw-r--r-- 1 boincer umatlas       100 Oct 12 20:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:56:46] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 20:47 run_atlas
[2025-10-12 22:56:46] -rw-r--r-- 1 boincer umatlas       105 Oct 12 20:47 job.xml
[2025-10-12 22:56:46] -rw-r--r-- 2 boincer umatlas 224055312 Oct 12 20:47 EVNT.46676267._004852.pool.root.1
[2025-10-12 22:56:46] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 20:47 input.tar.gz
[2025-10-12 22:56:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:47 start_atlas.sh
[2025-10-12 22:56:46] drwxrwx--x 2 boincer umatlas      4096 Oct 12 20:47 shared
[2025-10-12 22:56:46] -rw-r--r-- 1 boincer umatlas         0 Oct 12 20:47 boinc_lockfile
[2025-10-12 22:56:46] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 20:47 pandaJob.out
[2025-10-12 22:56:46] -rw------- 1 boincer umatlas    975603 Oct 12 20:47 agis_schedconf.cvmfs.json
[2025-10-12 22:56:46] -rw------- 1 boincer umatlas   1560580 Oct 12 20:47 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:56:46] drwx------ 5 boincer umatlas      4096 Oct 12 20:47 pilot3
[2025-10-12 22:56:46] -rw------- 1 boincer umatlas 198643634 Oct 12 22:55 HITS.46676269._088827.pool.root.1
[2025-10-12 22:56:46] -rw-r--r-- 1 boincer umatlas       529 Oct 12 22:55 boinc_task_state.xml
[2025-10-12 22:56:46] -rw------- 1 boincer umatlas      1049 Oct 12 22:55 memory_monitor_summary.json
[2025-10-12 22:56:46] -rw------- 1 boincer umatlas    378308 Oct 12 22:55 log.46676269._088827.job.log.tgz.1
[2025-10-12 22:56:46] -rw------- 1 boincer umatlas      7851 Oct 12 22:56 heartbeat.json
[2025-10-12 22:56:46] -rw------- 1 boincer umatlas        95 Oct 12 22:56 pilot_heartbeat.json
[2025-10-12 22:56:46] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 22:56 init_data.xml
[2025-10-12 22:56:46] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 22:56 boinc_mmap_file
[2025-10-12 22:56:46] -rw-r--r-- 1 boincer umatlas        27 Oct 12 22:56 wrapper_checkpoint.txt
[2025-10-12 22:56:46] -rw------- 1 boincer umatlas      4746 Oct 12 22:56 pilotlog.txt
[2025-10-12 22:56:46] -rw------- 1 boincer umatlas   1082057 Oct 12 22:56 log.46676269._088827.job.log.1
[2025-10-12 22:56:46] -rw------- 1 boincer umatlas       357 Oct 12 22:56 output.list
[2025-10-12 22:56:46] -rw-r--r-- 1 boincer umatlas       620 Oct 12 22:56 runtime_log
[2025-10-12 22:56:46] -rw------- 1 boincer umatlas   1474560 Oct 12 22:56 result.tar.gz
[2025-10-12 22:56:46] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 22:56 runtime_log.err
[2025-10-12 22:56:46] -rw------- 1 boincer umatlas       660 Oct 12 22:56 EkhNDmkxHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm2xUMDmwnacBo.diag
[2025-10-12 22:56:46] -rw-r--r-- 1 boincer umatlas     21133 Oct 12 22:56 stderr.txt
[2025-10-12 22:56:46] HITS file was successfully produced:
[2025-10-12 22:56:46] -rw------- 1 boincer umatlas 198643634 Oct 12 22:55 shared/HITS.pool.root.1
[2025-10-12 22:56:46]  *** Contents of shared directory: ***
[2025-10-12 22:56:46] total 414816
[2025-10-12 22:56:46] -rw-r--r-- 2 boincer umatlas 224055312 Oct 12 20:47 ATLAS.root_0
[2025-10-12 22:56:46] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 20:47 input.tar.gz
[2025-10-12 22:56:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:47 start_atlas.sh
[2025-10-12 22:56:46] -rw------- 1 boincer umatlas 198643634 Oct 12 22:55 HITS.pool.root.1
[2025-10-12 22:56:46] -rw------- 1 boincer umatlas   1474560 Oct 12 22:56 result.tar.gz
22:56:48 (21224): run_atlas exited; CPU time 57418.708866
22:56:48 (21224): called boinc_finish(0)

</stderr_txt>
]]>

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