Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-13 04:48:35 (1199826): vboxwrapper version 26210
2025-10-13 04:48:35 (1199826): BOINC client version: 7.18.1
2025-10-13 04:48:38 (1199826): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-10-13 04:48:38 (1199826): Successfully copied 'init_data.xml' to the shared directory.
2025-10-13 04:48:38 (1199826): Create VM. (boinc_99849bf4c469e30d, slot#3)
2025-10-13 04:48:38 (1199826): Setting Memory Size for VM. (4600MB)
2025-10-13 04:48:38 (1199826): Setting CPU Count for VM. (6)
2025-10-13 04:48:38 (1199826): Setting Chipset Options for VM.
2025-10-13 04:48:38 (1199826): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-13 04:48:38 (1199826): Setting Boot Options for VM.
2025-10-13 04:48:39 (1199826): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-13 04:48:39 (1199826): Enabling VM Network Access.
2025-10-13 04:48:39 (1199826): Disabling USB Support for VM.
2025-10-13 04:48:39 (1199826): Disabling COM Port Support for VM.
2025-10-13 04:48:39 (1199826): Disabling LPT Port Support for VM.
2025-10-13 04:48:39 (1199826): Disabling Audio Support for VM.
2025-10-13 04:48:39 (1199826): Disabling Clipboard Support for VM.
2025-10-13 04:48:39 (1199826): Disabling Drag and Drop Support for VM.
2025-10-13 04:48:39 (1199826): Adding storage controller(s) to VM.
2025-10-13 04:48:39 (1199826): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-13 04:48:39 (1199826): Adding VirtualBox Guest Additions to VM.
2025-10-13 04:48:39 (1199826): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-13 04:48:39 (1199826): forwarding host port 53931 to guest port 80
2025-10-13 04:48:39 (1199826): Enabling remote desktop for VM.
2025-10-13 04:48:39 (1199826): Required extension pack not installed, remote desktop not enabled.
2025-10-13 04:48:39 (1199826): Enabling shared directory for VM.
2025-10-13 04:48:39 (1199826): Starting VM using VBoxManage interface. (boinc_99849bf4c469e30d, slot#3)
2025-10-13 04:48:40 (1199826): Successfully started VM. (PID = '1200410')
2025-10-13 04:48:40 (1199826): Reporting VM Process ID to BOINC.
2025-10-13 04:48:40 (1199826): Guest Log: BIOS: VirtualBox 6.1.50
2025-10-13 04:48:40 (1199826): Guest Log: CPUID EDX: 0x178bfbff
2025-10-13 04:48:40 (1199826): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-13 04:48:40 (1199826): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-13 04:48:40 (1199826): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-13 04:48:40 (1199826): Detected: Web Application Enabled (http://localhost:53931)
2025-10-13 04:48:40 (1199826): Preference change detected
2025-10-13 04:48:40 (1199826): Setting CPU throttle for VM. (90%)
2025-10-13 04:48:41 (1199826): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-13 04:48:42 (1199826): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-13 04:48:42 (1199826): Guest Log: BIOS: Booting from Hard Disk...
2025-10-13 04:48:44 (1199826): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-13 04:48:44 (1199826): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-13 04:48:44 (1199826): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-13 04:48:50 (1199826): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-13 04:48:50 (1199826): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-13 04:48:55 (1199826): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-13 04:48:55 (1199826): Guest Log: 00:00:00.000222 main     Log opened 2025-10-13T01:48:53.032299000Z
2025-10-13 04:48:55 (1199826): Guest Log: 00:00:00.000334 main     OS Product: Linux
2025-10-13 04:48:55 (1199826): Guest Log: 00:00:00.000368 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-13 04:48:55 (1199826): Guest Log: 00:00:00.000394 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-13 04:48:55 (1199826): Guest Log: 00:00:00.000419 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-13 04:48:55 (1199826): Guest Log: 00:00:00.000420 main     Process ID: 1338
2025-10-13 04:48:55 (1199826): Guest Log: 00:00:00.000420 main     Package type: LINUX_64BITS_GENERIC
2025-10-13 04:48:55 (1199826): Guest Log: 00:00:00.001209 main     5.2.32 r132073 started. Verbose level = 0
2025-10-13 04:48:55 (1199826): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-13 04:48:55 (1199826): Guest Log: [INFO] Mounting shared directory
2025-10-13 04:48:55 (1199826): Guest Log: [INFO] Checking for init_data.xml
2025-10-13 04:48:58 (1199826): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-13 04:48:58 (1199826): Guest Log: [INFO] Detected branch: prod
2025-10-13 04:48:58 (1199826): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-13 04:48:58 (1199826): Guest Log: Copying input files
2025-10-13 04:48:59 (1199826): Guest Log: Copied input files into RunAtlas.
2025-10-13 04:48:59 (1199826): Guest Log: Detected user-configured HTTP proxy at http://proxy.kippola.kiulu10clients.net:3128 - will set in /etc/cvmfs/default.local
2025-10-13 04:49:07 (1199826): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-13 04:49:07 (1199826): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-13 04:49:07 (1199826): Guest Log: 2.6.3.0 1613 0 29588 151643 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.123.108:3128 1
2025-10-13 04:49:08 (1199826): Guest Log: copied the webapp to /var/www
2025-10-13 04:49:08 (1199826): Guest Log: ATHENA_PROC_NUMBER=6
2025-10-13 04:49:08 (1199826): Guest Log: ATHENA_CORE_NUMBER=6
2025-10-13 04:49:09 (1199826): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-13 04:49:09 (1199826): Guest Log:  *** Starting ATLAS job. (PandaID=6840714688 taskID=46676269) ***
2025-10-13 06:27:44 (1199826): Status Report: Elapsed Time: '6000.000000'
2025-10-13 06:27:44 (1199826): Status Report: CPU Time: '29955.620000'
2025-10-13 06:50:03 (1199826): Guest Log:  *** Job finished ***
2025-10-13 06:50:03 (1199826): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-13 06:50:03 (1199826): Guest Log: 2025-10-13 03:49:43,784 | INFO     | end of generic workflow (traces error code: 0)
2025-10-13 06:50:03 (1199826): Guest Log: 2025-10-13 03:49:43,784 | INFO     | traces error code: 0
2025-10-13 06:50:03 (1199826): Guest Log: 2025-10-13 03:49:43,784 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-13 06:50:03 (1199826): Guest Log: 2025-10-13 03:50:01,629 | INFO     | PID=6021 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-13 06:50:03 (1199826): Guest Log: 2025-10-13 03:50:01,630 | INFO     | found 0 job(s) in 20 queues
2025-10-13 06:50:03 (1199826): Guest Log: 2025-10-13 03:50:01,630 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-13 06:50:03 (1199826): Guest Log: 2025-10-13 03:50:01,630 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-13 06:50:03 (1199826): Guest Log: 2025-10-13 03:50:01,630 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-13 06:50:03 (1199826): Guest Log: 2025-10-13 03:50:01,630 | CRITICAL | thread 'MainThread' is not alive
2025-10-13 06:50:03 (1199826): Guest Log: 2025-10-13 03:50:01,630 | INFO     | [monitor] control thread has ended
2025-10-13 06:50:03 (1199826): Guest Log: 2025-10-13 03:50:01,711 [wrapper] ==== pilot stdout END ====
2025-10-13 06:50:03 (1199826): Guest Log: 2025-10-13 03:50:01,716 [wrapper] ==== wrapper stdout RESUME ====
2025-10-13 06:50:03 (1199826): Guest Log: 2025-10-13 03:50:01,721 [wrapper] pilotpid: 6021
2025-10-13 06:50:03 (1199826): Guest Log: 2025-10-13 03:50:01,725 [wrapper] Pilot exit status: 0
2025-10-13 06:50:03 (1199826): Guest Log: 2025-10-13 03:50:01,768 [wrapper] pandaids: 6840714688
2025-10-13 06:50:03 (1199826): Guest Log: 2025-10-13 03:50:01,796 [wrapper] cleanup supervisor_pilot  7449 6022
2025-10-13 06:50:03 (1199826): Guest Log: 2025-10-13 03:50:01,800 [wrapper] Test setup, not cleaning
2025-10-13 06:50:03 (1199826): Guest Log: 2025-10-13 03:50:01,805 [wrapper] apfmon messages muted
2025-10-13 06:50:03 (1199826): Guest Log: 2025-10-13 03:50:01,809 [wrapper] ==== wrapper stdout END ====
2025-10-13 06:50:03 (1199826): Guest Log: 2025-10-13 03:50:01,814 [wrapper] ==== wrapper stderr END ====
2025-10-13 06:50:03 (1199826): Guest Log:  *** Error codes and diagnostics ***
2025-10-13 06:50:03 (1199826): Guest Log:     "exeErrorCode": 0,
2025-10-13 06:50:03 (1199826): Guest Log:     "exeErrorDiag": "",
2025-10-13 06:50:03 (1199826): Guest Log:     "pilotErrorCode": 0,
2025-10-13 06:50:03 (1199826): Guest Log:     "pilotErrorDiag": "",
2025-10-13 06:50:03 (1199826): Guest Log:  *** Listing of results directory ***
2025-10-13 06:50:03 (1199826): Guest Log: total 187820
2025-10-13 06:50:03 (1199826): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 12 19:50 pilot3.tar.gz
2025-10-13 06:50:03 (1199826): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 12 19:59 runpilot2-wrapper.sh
2025-10-13 06:50:03 (1199826): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 12 19:59 queuedata.json
2025-10-13 06:50:03 (1199826): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct 13 01:48 start_atlas.sh
2025-10-13 06:50:03 (1199826): Guest Log: -rw-r--r--. 1 atlas atlas      7476 Oct 13 01:48 init_data.xml
2025-10-13 06:50:03 (1199826): Guest Log: -rw-r--r--. 1 atlas atlas    569674 Oct 13 01:48 input.tar.gz
2025-10-13 06:50:03 (1199826): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 13 01:48 EVNT.46676267._004478.pool.root.1 -> /data/./ATLAS.root_0
2025-10-13 06:50:03 (1199826): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 13 01:49 pandaJob.out
2025-10-13 06:50:03 (1199826): Guest Log: -rw-------. 1 atlas atlas    975595 Oct 13 01:49 agis_schedconf.cvmfs.json
2025-10-13 06:50:03 (1199826): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 13 01:49 agis_ddmendpoints.agis.ALL.json
2025-10-13 06:50:03 (1199826): Guest Log: drwx------. 5 atlas atlas      4096 Oct 13 01:49 pilot3
2025-10-13 06:50:03 (1199826): Guest Log: -rw-------. 1 atlas atlas 185934198 Oct 13 03:48 HITS.46676269._088084.pool.root.1
2025-10-13 06:50:03 (1199826): Guest Log: -rw-------. 1 atlas atlas      1032 Oct 13 03:49 memory_monitor_summary.json
2025-10-13 06:50:03 (1199826): Guest Log: -rw-------. 1 atlas atlas    316894 Oct 13 03:49 log.46676269._088084.job.log.tgz.1
2025-10-13 06:50:03 (1199826): Guest Log: -rw-------. 1 atlas atlas      7819 Oct 13 03:49 heartbeat.json
2025-10-13 06:50:03 (1199826): Guest Log: -rw-------. 1 atlas atlas        95 Oct 13 03:50 pilot_heartbeat.json
2025-10-13 06:50:03 (1199826): Guest Log: -rw-------. 1 atlas atlas       814 Oct 13 03:50 pilotlog.txt
2025-10-13 06:50:03 (1199826): Guest Log: -rw-------. 1 atlas atlas    964203 Oct 13 03:50 log.46676269._088084.job.log.1
2025-10-13 06:50:03 (1199826): Guest Log: -rw-------. 1 atlas atlas       357 Oct 13 03:50 output.list
2025-10-13 06:50:03 (1199826): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 13 03:50 runtime_log
2025-10-13 06:50:03 (1199826): Guest Log: -rw-------. 1 atlas atlas   1300480 Oct 13 03:50 result.tar.gz
2025-10-13 06:50:03 (1199826): Guest Log: -rw-------. 1 atlas atlas       673 Oct 13 03:50 vGLNDm0OHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmhtUMDm4Rpr4n.diag
2025-10-13 06:50:03 (1199826): Guest Log: -rw-r--r--. 1 atlas atlas      8696 Oct 13 03:50 runtime_log.err
2025-10-13 06:50:03 (1199826): Guest Log: Looking for outputfile HITS.46676269._088084.pool.root.1
2025-10-13 06:50:03 (1199826): Guest Log: HITS file was successfully produced
2025-10-13 06:50:03 (1199826): Guest Log: -rw-------. 1 atlas atlas 185934198 Oct 13 03:48 /home/atlas/RunAtlas/HITS.46676269._088084.pool.root.1
2025-10-13 06:50:04 (1199826): Guest Log: Successfully finished the ATLAS job!
2025-10-13 06:50:04 (1199826): Guest Log: Copying the results back to the shared directory!
2025-10-13 06:50:04 (1199826): Guest Log:  *** Contents of shared directory: ***
2025-10-13 06:50:04 (1199826): Guest Log: total 215138
2025-10-13 06:50:04 (1199826): Guest Log: -rw-r--r--. 1 root root 219575209 Oct 13 01:48 ATLAS.root_0
2025-10-13 06:50:04 (1199826): Guest Log: -rw-r--r--. 1 root root      7476 Oct 13 01:48 init_data.xml
2025-10-13 06:50:04 (1199826): Guest Log: -rw-r--r--. 1 root root    569674 Oct 13 01:48 input.tar.gz
2025-10-13 06:50:04 (1199826): Guest Log: -rw-r--r--. 1 root root   1300480 Oct 13 03:50 result.tar.gz
2025-10-13 06:50:04 (1199826): Guest Log: -rw-r--r--. 1 root root     15120 Oct 13 01:48 start_atlas.sh
2025-10-13 06:50:04 (1199826): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-13 06:50:04 (1199826): VM Completion File Detected.
2025-10-13 06:50:04 (1199826): Powering off VM.
2025-10-13 06:50:04 (1199826): Successfully stopped VM.
2025-10-13 06:50:04 (1199826): Deregistering VM. (boinc_99849bf4c469e30d, slot#3)
2025-10-13 06:50:04 (1199826): Removing network bandwidth throttle group from VM.
2025-10-13 06:50:04 (1199826): Removing VM from VirtualBox.
2025-10-13 06:50:09 (1199826): called boinc_finish(0)

</stderr_txt>
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