Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:40:22 (6418): wrapper (7.7.26015): starting
20:40:22 (6418): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:40:22] Arguments: --nthreads 8
[2025-10-12 20:40:22] Threads: 8
[2025-10-12 20:40:22] Checking for CVMFS
[2025-10-12 20:40:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:40:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:40:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:40:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:40:22] 2.11.2.0 10816 53587 130300 151642 1 59 17006417 18432000 1833 130560 0 47455287 99.975 2395186 30288 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 20:40:22] CVMFS is ok
[2025-10-12 20:40:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:40:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:40:22] Further information can be found at the LHC@home message board.
[2025-10-12 20:40:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:40:22] Checking for apptainer binary...
[2025-10-12 20:40:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:40:22] Running /usr/bin/apptainer --version
[2025-10-12 20:40:22] apptainer version 1.3.2-1.el7
[2025-10-12 20:40:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:40:23] c-206-11.aglt2.org
[2025-10-12 20:40:23] apptainer works
[2025-10-12 20:40:23] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:40:23] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:40:23] Starting ATLAS job with PandaID=6840749729
[2025-10-12 20:40:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:44:58]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:44:58] 2025-10-13 03:44:16,532 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:44:58] 2025-10-13 03:44:16,532 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:44:58] 2025-10-13 03:44:16,532 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:44:58] 2025-10-13 03:44:16,535 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:44:58] 2025-10-13 03:44:16,535 | INFO     | sum of square deviations: 1838657730.0
[2025-10-12 23:44:58] 2025-10-13 03:44:16,536 | INFO     | sum of deviations: -12939391674.999996
[2025-10-12 23:44:58] 2025-10-13 03:44:16,536 | INFO     | mean x: 1760321548.0
[2025-10-12 23:44:58] 2025-10-13 03:44:16,536 | INFO     | mean y: 2501525.1104972376
[2025-10-12 23:44:58] 2025-10-13 03:44:16,536 | INFO     | -- intersect: 12390609225.565603
[2025-10-12 23:44:58] 2025-10-13 03:44:16,536 | INFO     | intersect: 12390609225.565603
[2025-10-12 23:44:58] 2025-10-13 03:44:16,537 | INFO     | chi2: 2.288914404359652
[2025-10-12 23:44:58] 2025-10-13 03:44:16,537 | INFO     | sum of square deviations: 1690450300.0
[2025-10-12 23:44:58] 2025-10-13 03:44:16,538 | INFO     | sum of deviations: -568943156.9999988
[2025-10-12 23:44:58] 2025-10-13 03:44:16,538 | INFO     | mean x: 1760321395.5
[2025-10-12 23:44:58] 2025-10-13 03:44:16,538 | INFO     | mean y: 2513979.3181818184
[2025-10-12 23:44:58] 2025-10-13 03:44:16,538 | INFO     | -- intersect: 594973167.3170326
[2025-10-12 23:44:58] 2025-10-13 03:44:16,538 | INFO     | intersect: 594973167.3170326
[2025-10-12 23:44:58] 2025-10-13 03:44:16,538 | INFO     | chi2: 1.5236039684850542
[2025-10-12 23:44:58] 2025-10-13 03:44:16,539 | INFO     | current chi2=1.5236039684850542 (change=33.435520105816344 %)
[2025-10-12 23:44:58] 2025-10-13 03:44:16,539 | INFO     | sum of square deviations: 1550429070.0
[2025-10-12 23:44:58] 2025-10-13 03:44:16,540 | INFO     | sum of deviations: -339801902.9999999
[2025-10-12 23:44:58] 2025-10-13 03:44:16,540 | INFO     | mean x: 1760321243.0
[2025-10-12 23:44:58] 2025-10-13 03:44:16,540 | INFO     | mean y: 2514228.947368421
[2025-10-12 23:44:58] 2025-10-13 03:44:16,540 | INFO     | -- intersect: 388317436.4831542
[2025-10-12 23:44:58] 2025-10-13 03:44:16,540 | INFO     | intersect: 388317436.4831542
[2025-10-12 23:44:58] 2025-10-13 03:44:16,540 | INFO     | chi2: 1.5240237873131899
[2025-10-12 23:44:58] 2025-10-13 03:44:16,540 | INFO     | current chi2=1.5240237873131899 (change=-0.0275543275562035 %)
[2025-10-12 23:44:58] 2025-10-13 03:44:16,540 | INFO     | right removable region: 170
[2025-10-12 23:44:58] 2025-10-13 03:44:16,541 | INFO     | sum of square deviations: 1690450300.0
[2025-10-12 23:44:58] 2025-10-13 03:44:16,542 | INFO     | sum of deviations: -38317046666.0
[2025-10-12 23:44:58] 2025-10-13 03:44:16,542 | INFO     | mean x: 1760321700.5
[2025-10-12 23:44:58] 2025-10-13 03:44:16,542 | INFO     | mean y: 2527290.477272727
[2025-10-12 23:44:58] 2025-10-13 03:44:16,542 | INFO     | -- intersect: 39903332859.99386
[2025-10-12 23:44:58] 2025-10-13 03:44:16,542 | INFO     | intersect: 39903332859.99386
[2025-10-12 23:44:58] 2025-10-13 03:44:16,542 | INFO     | chi2: 0.9547945937674074
[2025-10-12 23:44:58] 2025-10-13 03:44:16,542 | INFO     | current chi2=0.9547945937674074 (change=58.28613809459943 %)
[2025-10-12 23:44:58] 2025-10-13 03:44:16,543 | INFO     | sum of square deviations: 1550429070.0
[2025-10-12 23:44:58] 2025-10-13 03:44:16,543 | INFO     | sum of deviations: -39921292803.0
[2025-10-12 23:44:58] 2025-10-13 03:44:16,544 | INFO     | mean x: 1760321853.0
[2025-10-12 23:44:58] 2025-10-13 03:44:16,544 | INFO     | mean y: 2529000.678362573
[2025-10-12 23:44:58] 2025-10-13 03:44:16,544 | INFO     | -- intersect: 45328255588.823746
[2025-10-12 23:44:58] 2025-10-13 03:44:16,544 | INFO     | intersect: 45328255588.823746
[2025-10-12 23:44:58] 2025-10-13 03:44:16,544 | INFO     | chi2: 0.9269917037127098
[2025-10-12 23:44:58] 2025-10-13 03:44:16,544 | INFO     | current chi2=0.9269917037127098 (change=2.911923699210903 %)
[2025-10-12 23:44:58] 2025-10-13 03:44:16,544 | INFO     | left removable region: 20
[2025-10-12 23:44:58] 2025-10-13 03:44:16,545 | INFO     | sum of square deviations: 1046484737.5
[2025-10-12 23:44:58] 2025-10-13 03:44:16,545 | INFO     | sum of deviations: -17032683123.5
[2025-10-12 23:44:58] 2025-10-13 03:44:16,545 | INFO     | mean x: 1760321822.5
[2025-10-12 23:44:58] 2025-10-13 03:44:16,545 | INFO     | mean y: 2531665.1266666665
[2025-10-12 23:44:58] 2025-10-13 03:44:16,546 | INFO     | -- intersect: 28653693716.13987
[2025-10-12 23:44:58] 2025-10-13 03:44:16,546 | INFO     | intersect: 28653693716.13987
[2025-10-12 23:44:58] 2025-10-13 03:44:16,546 | INFO     | chi2: 0.11446990435173018
[2025-10-12 23:44:58] 2025-10-13 03:44:16,546 | INFO     | -- intersect: 28653693716.13987
[2025-10-12 23:44:58] 2025-10-13 03:44:16,546 | INFO     | current memory leak: -16.28 B/s (using 150 data points, chi2=0.11)
[2025-10-12 23:44:58] 2025-10-13 03:44:16,547 | INFO     | could have reported an average CPU frequency of 2563 MHz (9 samples)
[2025-10-12 23:44:58] 2025-10-13 03:44:16,547 | INFO     | ..............................
[2025-10-12 23:44:58] 2025-10-13 03:44:16,547 | INFO     | . Timing measurements:
[2025-10-12 23:44:58] 2025-10-13 03:44:16,547 | INFO     | . get job = 0 s
[2025-10-12 23:44:58] 2025-10-13 03:44:16,547 | INFO     | . initial setup = 2 s
[2025-10-12 23:44:58] 2025-10-13 03:44:16,547 | INFO     | . payload setup = 4 s
[2025-10-12 23:44:58] 2025-10-13 03:44:16,547 | INFO     | . stage-in = 0 s
[2025-10-12 23:44:58] 2025-10-13 03:44:16,547 | INFO     | . payload execution = 10990 s
[2025-10-12 23:44:58] 2025-10-13 03:44:16,547 | INFO     | . stage-out = 2 s
[2025-10-12 23:44:58] 2025-10-13 03:44:16,547 | INFO     | . log creation = 0 s
[2025-10-12 23:44:58] 2025-10-13 03:44:16,548 | INFO     | ..............................
[2025-10-12 23:44:58] 2025-10-13 03:44:16,923 | INFO     | 
[2025-10-12 23:44:58] 2025-10-13 03:44:16,923 | INFO     | job summary report
[2025-10-12 23:44:58] 2025-10-13 03:44:16,923 | INFO     | --------------------------------------------------
[2025-10-12 23:44:58] 2025-10-13 03:44:16,923 | INFO     | PanDA job id: 6840749729
[2025-10-12 23:44:58] 2025-10-13 03:44:16,923 | INFO     | task id: 46676269
[2025-10-12 23:44:58] 2025-10-13 03:44:16,924 | INFO     | errors: (none)
[2025-10-12 23:44:58] 2025-10-13 03:44:16,924 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:44:58] 2025-10-13 03:44:16,924 | INFO     | pilot state: finished 
[2025-10-12 23:44:58] 2025-10-13 03:44:16,924 | INFO     | transexitcode: 0
[2025-10-12 23:44:58] 2025-10-13 03:44:16,924 | INFO     | exeerrorcode: 0
[2025-10-12 23:44:58] 2025-10-13 03:44:16,924 | INFO     | exeerrordiag: 
[2025-10-12 23:44:58] 2025-10-13 03:44:16,925 | INFO     | exitcode: 0
[2025-10-12 23:44:58] 2025-10-13 03:44:16,925 | INFO     | exitmsg: OK
[2025-10-12 23:44:58] 2025-10-13 03:44:16,925 | INFO     | cpuconsumptiontime: 82027 s
[2025-10-12 23:44:58] 2025-10-13 03:44:16,925 | INFO     | nevents: 400
[2025-10-12 23:44:58] 2025-10-13 03:44:16,925 | INFO     | neventsw: 0
[2025-10-12 23:44:58] 2025-10-13 03:44:16,925 | INFO     | pid: 16496
[2025-10-12 23:44:58] 2025-10-13 03:44:16,926 | INFO     | pgrp: 16496
[2025-10-12 23:44:58] 2025-10-13 03:44:16,926 | INFO     | corecount: 8
[2025-10-12 23:44:58] 2025-10-13 03:44:16,926 | INFO     | event service: False
[2025-10-12 23:44:58] 2025-10-13 03:44:16,926 | INFO     | sizes: {0: 2348629, 1: 2348884, 4: 2349146, 12: 2349174, 10999: 2378304, 11002: 2387302, 11004: 2387486, 11008: 2387744}
[2025-10-12 23:44:58] 2025-10-13 03:44:16,926 | INFO     | --------------------------------------------------
[2025-10-12 23:44:58] 2025-10-13 03:44:16,926 | INFO     | 
[2025-10-12 23:44:58] 2025-10-13 03:44:16,927 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 23:44:58] 2025-10-13 03:44:16,946 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:44:58] 2025-10-13 03:44:16,946 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:44:58] 2025-10-13 03:44:16,946 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:44:58] 2025-10-13 03:44:16,947 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:44:58] 2025-10-13 03:44:16,947 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:44:58] 2025-10-13 03:44:16,947 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:44:58] 2025-10-13 03:44:16,947 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:44:58] 2025-10-13 03:44:16,947 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:44:58] 2025-10-13 03:44:16,947 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:44:58] 2025-10-13 03:44:16,948 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:44:58] 2025-10-13 03:44:16,948 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:44:58] 2025-10-13 03:44:16,948 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:44:58] 2025-10-13 03:44:16,948 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:44:58] 2025-10-13 03:44:16,948 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:44:58] 2025-10-13 03:44:16,949 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:44:58] 2025-10-13 03:44:16,949 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:44:58] 2025-10-13 03:44:16,949 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:44:58] 2025-10-13 03:44:16,949 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:44:58] 2025-10-13 03:44:16,949 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:44:58] 2025-10-13 03:44:16,950 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:44:58] 2025-10-13 03:44:16,950 | INFO     | job 6840749729 has completed (purged errors)
[2025-10-12 23:44:58] 2025-10-13 03:44:16,950 | INFO     | overall cleanup function is called
[2025-10-12 23:44:58] 2025-10-13 03:44:17,957 | INFO     | --- collectZombieJob: --- 10, [16496]
[2025-10-12 23:44:58] 2025-10-13 03:44:17,958 | INFO     | zombie collector waiting for pid 16496
[2025-10-12 23:44:58] 2025-10-13 03:44:17,958 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:44:58] 2025-10-13 03:44:17,958 | INFO     | collected zombie processes
[2025-10-12 23:44:58] 2025-10-13 03:44:17,958 | INFO     | will attempt to kill all subprocesses of pid=16496
[2025-10-12 23:44:58] 2025-10-13 03:44:18,085 | INFO     | process IDs to be killed: [16496] (in reverse order)
[2025-10-12 23:44:58] 2025-10-13 03:44:18,128 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:44:58] 2025-10-13 03:44:18,128 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:44:58] 2025-10-13 03:44:18,133 | INFO     | did not find any defunct processes belonging to 16496
[2025-10-12 23:44:58] 2025-10-13 03:44:18,138 | INFO     | did not find any defunct processes belonging to 16496
[2025-10-12 23:44:58] 2025-10-13 03:44:18,138 | INFO     | ready for new job
[2025-10-12 23:44:58] 2025-10-13 03:44:18,138 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:44:58] 2025-10-13 03:44:18,140 | INFO     | ***************************************
[2025-10-12 23:44:58] 2025-10-13 03:44:18,140 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:44:58] 2025-10-13 03:44:18,141 | INFO     | ***************************************
[2025-10-12 23:44:58] 2025-10-13 03:44:18,141 | INFO     | 
[2025-10-12 23:44:58] 2025-10-13 03:44:18,142 | INFO     | architecture information:
[2025-10-12 23:44:58] 2025-10-13 03:44:18,142 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:44:58] 2025-10-13 03:44:18,162 | INFO     | cat /etc/os-release:
[2025-10-12 23:44:58] NAME="CentOS Linux"
[2025-10-12 23:44:58] VERSION="7 (Core)"
[2025-10-12 23:44:58] ID="centos"
[2025-10-12 23:44:58] ID_LIKE="rhel fedora"
[2025-10-12 23:44:58] VERSION_ID="7"
[2025-10-12 23:44:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:44:58] ANSI_COLOR="0;31"
[2025-10-12 23:44:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:44:58] HOME_URL="https://www.centos.org/"
[2025-10-12 23:44:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:44:58] 
[2025-10-12 23:44:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:44:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:44:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:44:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:44:58] 
[2025-10-12 23:44:58] 2025-10-13 03:44:18,162 | INFO     | ***************************************
[2025-10-12 23:44:58] 2025-10-13 03:44:18,665 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 23:44:58] 2025-10-13 03:44:18,687 | INFO     | sufficient remaining disk space (28172091392 B)
[2025-10-12 23:44:58] 2025-10-13 03:44:18,687 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:44:58] 2025-10-13 03:44:18,687 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:44:58] 2025-10-13 03:44:18,687 | INFO     | update_server=False
[2025-10-12 23:44:58] 2025-10-13 03:44:18,688 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:44:58] 2025-10-13 03:44:18,688 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:44:58] 2025-10-13 03:44:18,688 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:44:58] 2025-10-13 03:44:18,688 | INFO     | aborting loop
[2025-10-12 23:44:58] 2025-10-13 03:44:18,901 | INFO     | all payload control threads have been joined
[2025-10-12 23:44:58] 2025-10-13 03:44:18,982 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:44:58] 2025-10-13 03:44:19,068 | INFO     | all data control threads have been joined
[2025-10-12 23:44:58] 2025-10-13 03:44:19,187 | INFO     | all job control threads have been joined
[2025-10-12 23:44:58] 2025-10-13 03:44:19,693 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:44:58] 2025-10-13 03:44:19,694 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:44:58] 2025-10-13 03:44:19,711 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:44:58] 2025-10-13 03:44:19,840 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:44:58] 2025-10-13 03:44:19,906 | INFO     | [payload] control thread has finished
[2025-10-12 23:44:58] 2025-10-13 03:44:19,954 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:44:58] 2025-10-13 03:44:19,959 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:44:58] 2025-10-13 03:44:20,070 | INFO     | [data] control thread has finished
[2025-10-12 23:44:58] 2025-10-13 03:44:20,193 | INFO     | [job] control thread has finished
[2025-10-12 23:44:58] 2025-10-13 03:44:20,397 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:44:58] 2025-10-13 03:44:20,444 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:44:58] 2025-10-13 03:44:20,694 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:44:58] 2025-10-13 03:44:20,783 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:44:58] 2025-10-13 03:44:21,054 | INFO     | [job] validate thread has finished
[2025-10-12 23:44:58] 2025-10-13 03:44:21,640 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:44:58] 2025-10-13 03:44:22,646 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:44:58] 2025-10-13 03:44:22,989 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:44:58] 2025-10-13 03:44:49,785 | INFO     | PID=10120 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 23:44:58] 2025-10-13 03:44:49,786 | INFO     | .. there are 3 such processes running
[2025-10-12 23:44:58] 2025-10-13 03:44:49,787 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:44:58] 2025-10-13 03:44:49,787 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:44:58] 2025-10-13 03:44:49,787 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:44:58] 2025-10-13 03:44:51,553 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:44:58] 2025-10-13 03:44:53,111 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139923262515008)>', '<ExcThread(monitor, started 139922820282112)>']
[2025-10-12 23:44:58] 2025-10-13 03:44:53,810 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:44:58] 2025-10-13 03:44:53,810 | INFO     | [monitor] control thread has ended
[2025-10-12 23:44:58] 2025-10-13 03:44:58,136 | INFO     | all workflow threads have been joined
[2025-10-12 23:44:58] 2025-10-13 03:44:58,137 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:44:58] 2025-10-13 03:44:58,137 | INFO     | traces error code: 0
[2025-10-12 23:44:58] 2025-10-13 03:44:58,137 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:44:58] 2025-10-13 03:44:58,267 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:44:58] 2025-10-13 03:44:58,269 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:44:58] 2025-10-13 03:44:58,272 [wrapper] pilotpid: 10120
[2025-10-12 23:44:58] 2025-10-13 03:44:58,274 [wrapper] Pilot exit status: 0
[2025-10-12 23:44:58] 2025-10-13 03:44:58,295 [wrapper] pandaids: 6840749729
[2025-10-12 23:44:58] 2025-10-13 03:44:58,335 [wrapper] cleanup supervisor_pilot 22152 10121
[2025-10-12 23:44:58] 2025-10-13 03:44:58,337 [wrapper] Test setup, not cleaning
[2025-10-12 23:44:58] 2025-10-13 03:44:58,342 [wrapper] apfmon messages muted
[2025-10-12 23:44:58] 2025-10-13 03:44:58,344 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:44:58] 2025-10-13 03:44:58,346 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:44:58]  *** Error codes and diagnostics ***
[2025-10-12 23:44:58]     "exeErrorCode": 0,
[2025-10-12 23:44:58]     "exeErrorDiag": "",
[2025-10-12 23:44:58]     "pilotErrorCode": 0,
[2025-10-12 23:44:58]     "pilotErrorDiag": "",
[2025-10-12 23:44:58]  *** Listing of results directory ***
[2025-10-12 23:44:58] total 415960
[2025-10-12 23:44:58] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 16:43 pilot3.tar.gz
[2025-10-12 23:44:58] -rwx------ 1 boincer umatlas     36292 Oct 12 16:50 runpilot2-wrapper.sh
[2025-10-12 23:44:58] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 16:50 queuedata.json
[2025-10-12 23:44:58] -rw-r--r-- 1 boincer umatlas       100 Oct 12 20:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:44:58] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 20:40 run_atlas
[2025-10-12 23:44:58] -rw-r--r-- 1 boincer umatlas       105 Oct 12 20:40 job.xml
[2025-10-12 23:44:58] -rw-r--r-- 2 boincer umatlas 221415827 Oct 12 20:40 EVNT.46676267._004756.pool.root.1
[2025-10-12 23:44:58] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:40 start_atlas.sh
[2025-10-12 23:44:58] drwxrwx--x 2 boincer umatlas      4096 Oct 12 20:40 shared
[2025-10-12 23:44:58] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 20:40 input.tar.gz
[2025-10-12 23:44:58] -rw-r--r-- 1 boincer umatlas         0 Oct 12 20:40 boinc_lockfile
[2025-10-12 23:44:58] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 20:40 pandaJob.out
[2025-10-12 23:44:58] -rw------- 1 boincer umatlas    975603 Oct 12 20:40 agis_schedconf.cvmfs.json
[2025-10-12 23:44:58] drwx------ 5 boincer umatlas      4096 Oct 12 20:40 pilot3
[2025-10-12 23:44:58] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 23:37 init_data.xml
[2025-10-12 23:44:58] -rw------- 1 boincer umatlas 196696330 Oct 12 23:43 HITS.46676269._089157.pool.root.1
[2025-10-12 23:44:58] -rw-r--r-- 1 boincer umatlas       530 Oct 12 23:43 boinc_task_state.xml
[2025-10-12 23:44:58] -rw------- 1 boincer umatlas      1054 Oct 12 23:44 memory_monitor_summary.json
[2025-10-12 23:44:58] -rw------- 1 boincer umatlas   1560580 Oct 12 23:44 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:44:58] -rw------- 1 boincer umatlas    421335 Oct 12 23:44 log.46676269._089157.job.log.tgz.1
[2025-10-12 23:44:58] -rw------- 1 boincer umatlas      7860 Oct 12 23:44 heartbeat.json
[2025-10-12 23:44:58] -rw------- 1 boincer umatlas        95 Oct 12 23:44 pilot_heartbeat.json
[2025-10-12 23:44:58] -rw-r--r-- 1 boincer umatlas        28 Oct 12 23:44 wrapper_checkpoint.txt
[2025-10-12 23:44:58] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 23:44 boinc_mmap_file
[2025-10-12 23:44:58] -rw------- 1 boincer umatlas      4821 Oct 12 23:44 pilotlog.txt
[2025-10-12 23:44:58] -rw------- 1 boincer umatlas   1543541 Oct 12 23:44 log.46676269._089157.job.log.1
[2025-10-12 23:44:58] -rw------- 1 boincer umatlas       357 Oct 12 23:44 output.list
[2025-10-12 23:44:58] -rw-r--r-- 1 boincer umatlas       620 Oct 12 23:44 runtime_log
[2025-10-12 23:44:58] -rw------- 1 boincer umatlas   1986560 Oct 12 23:44 result.tar.gz
[2025-10-12 23:44:58] -rw------- 1 boincer umatlas       662 Oct 12 23:44 SKlKDmmCIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqVlNDm1ClMJn.diag
[2025-10-12 23:44:58] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 23:44 runtime_log.err
[2025-10-12 23:44:58] -rw-r--r-- 1 boincer umatlas     20867 Oct 12 23:44 stderr.txt
[2025-10-12 23:44:58] HITS file was successfully produced:
[2025-10-12 23:44:58] -rw------- 1 boincer umatlas 196696330 Oct 12 23:43 shared/HITS.pool.root.1
[2025-10-12 23:44:58]  *** Contents of shared directory: ***
[2025-10-12 23:44:58] total 410836
[2025-10-12 23:44:58] -rw-r--r-- 2 boincer umatlas 221415827 Oct 12 20:40 ATLAS.root_0
[2025-10-12 23:44:58] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:40 start_atlas.sh
[2025-10-12 23:44:58] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 20:40 input.tar.gz
[2025-10-12 23:44:58] -rw------- 1 boincer umatlas 196696330 Oct 12 23:43 HITS.pool.root.1
[2025-10-12 23:44:58] -rw------- 1 boincer umatlas   1986560 Oct 12 23:44 result.tar.gz
23:44:59 (6418): run_atlas exited; CPU time 82165.680144
23:44:59 (6418): called boinc_finish(0)

</stderr_txt>
]]>

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