Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:58:04 (919623): wrapper (7.7.26015): starting
20:58:04 (919623): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:58:04] Arguments: --nthreads 8
[2025-10-12 20:58:04] Threads: 8
[2025-10-12 20:58:04] Checking for CVMFS
[2025-10-12 20:58:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:58:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:58:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:58:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:58:07] 2.13.2.0 842134 129994 270836 151642 1 407 25582633 32935936 16662 16776704 0 170209869 99.560 196429541 30448 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 20:58:07] CVMFS is ok
[2025-10-12 20:58:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:58:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:58:07] Further information can be found at the LHC@home message board.
[2025-10-12 20:58:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:58:07] Checking for apptainer binary...
[2025-10-12 20:58:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:58:07] Running /usr/bin/apptainer --version
[2025-10-12 20:58:07] apptainer version 1.4.3-1.el9
[2025-10-12 20:58:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:58:08] c6-5-37-2.aglt2.org
[2025-10-12 20:58:08] apptainer works
[2025-10-12 20:58:08] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:58:08] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:58:08] Starting ATLAS job with PandaID=6840749635
[2025-10-12 20:58:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:52:59]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:53:00] 2025-10-13 11:52:00,972 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:53:00] 2025-10-13 11:52:01,699 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 07:53:00] 2025-10-13 11:52:01,758 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2628.049410714285
[2025-10-13 07:53:00] 2025-10-13 11:52:01,768 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840749635/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:53:00] 2025-10-13 11:52:01,770 | INFO     | extracted standard info from prmon json
[2025-10-13 07:53:00] 2025-10-13 11:52:01,770 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:53:00] 2025-10-13 11:52:01,770 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:53:00] 2025-10-13 11:52:01,771 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:53:00] 2025-10-13 11:52:01,771 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:53:00] 2025-10-13 11:52:01,854 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:53:00] 2025-10-13 11:52:01,859 | INFO     | sum of square deviations: 80905919347.74017
[2025-10-13 07:53:00] 2025-10-13 11:52:01,874 | INFO     | sum of deviations: 256596513640.529
[2025-10-13 07:53:00] 2025-10-13 11:52:01,875 | INFO     | mean x: 1760336813.5039124
[2025-10-13 07:53:00] 2025-10-13 11:52:01,875 | INFO     | mean y: 2101469.5884194053
[2025-10-13 07:53:00] 2025-10-13 11:52:01,875 | INFO     | -- intersect: -5580880502.802932
[2025-10-13 07:53:00] 2025-10-13 11:52:01,875 | INFO     | intersect: -5580880502.802932
[2025-10-13 07:53:00] 2025-10-13 11:52:01,877 | INFO     | chi2: 4.1669015347991545
[2025-10-13 07:53:00] 2025-10-13 11:52:01,878 | INFO     | sum of square deviations: 79021638038.96071
[2025-10-13 07:53:00] 2025-10-13 11:52:01,893 | INFO     | sum of deviations: 288115828919.7604
[2025-10-13 07:53:00] 2025-10-13 11:52:01,893 | INFO     | mean x: 1760336661.0078864
[2025-10-13 07:53:00] 2025-10-13 11:52:01,893 | INFO     | mean y: 2104003.447949527
[2025-10-13 07:53:00] 2025-10-13 11:52:01,893 | INFO     | -- intersect: -6416148880.832565
[2025-10-13 07:53:00] 2025-10-13 11:52:01,893 | INFO     | intersect: -6416148880.832565
[2025-10-13 07:53:00] 2025-10-13 11:52:01,894 | INFO     | chi2: 3.496033401973606
[2025-10-13 07:53:00] 2025-10-13 11:52:01,895 | INFO     | current chi2=3.496033401973606 (change=16.099927661426833 %)
[2025-10-13 07:53:00] 2025-10-13 11:52:01,895 | INFO     | right removable region: 633
[2025-10-13 07:53:00] 2025-10-13 11:52:01,896 | INFO     | sum of square deviations: 79021441618.96074
[2025-10-13 07:53:00] 2025-10-13 11:52:01,910 | INFO     | sum of deviations: 123775603908.43692
[2025-10-13 07:53:00] 2025-10-13 11:52:01,911 | INFO     | mean x: 1760336966.0078864
[2025-10-13 07:53:00] 2025-10-13 11:52:01,911 | INFO     | mean y: 2112204.5126182963
[2025-10-13 07:53:00] 2025-10-13 11:52:01,911 | INFO     | -- intersect: -2755199818.4774947
[2025-10-13 07:53:00] 2025-10-13 11:52:01,911 | INFO     | intersect: -2755199818.4774947
[2025-10-13 07:53:00] 2025-10-13 11:52:01,912 | INFO     | chi2: 1.8406385531613316
[2025-10-13 07:53:00] 2025-10-13 11:52:01,912 | INFO     | current chi2=1.8406385531613316 (change=55.82716467404957 %)
[2025-10-13 07:53:00] 2025-10-13 11:52:01,913 | INFO     | sum of square deviations: 77166530163.20181
[2025-10-13 07:53:00] 2025-10-13 11:52:01,932 | INFO     | sum of deviations: 73456290441.20834
[2025-10-13 07:53:00] 2025-10-13 11:52:01,933 | INFO     | mean x: 1760337118.508744
[2025-10-13 07:53:00] 2025-10-13 11:52:01,933 | INFO     | mean y: 2116340.8712241654
[2025-10-13 07:53:00] 2025-10-13 11:52:01,933 | INFO     | -- intersect: -1673582104.790918
[2025-10-13 07:53:00] 2025-10-13 11:52:01,933 | INFO     | intersect: -1673582104.790918
[2025-10-13 07:53:00] 2025-10-13 11:52:01,933 | INFO     | chi2: 1.547474952710765
[2025-10-13 07:53:00] 2025-10-13 11:52:01,934 | INFO     | current chi2=1.547474952710765 (change=15.92727697390955 %)
[2025-10-13 07:53:00] 2025-10-13 11:52:01,934 | INFO     | left removable region: 20
[2025-10-13 07:53:00] 2025-10-13 11:52:01,934 | INFO     | sum of square deviations: 71426411249.10284
[2025-10-13 07:53:00] 2025-10-13 11:52:01,941 | INFO     | sum of deviations: 30231134783.481213
[2025-10-13 07:53:00] 2025-10-13 11:52:01,942 | INFO     | mean x: 1760337240.5154974
[2025-10-13 07:53:00] 2025-10-13 11:52:01,942 | INFO     | mean y: 2125735.1598694944
[2025-10-13 07:53:00] 2025-10-13 11:52:01,942 | INFO     | -- intersect: -742934690.6930928
[2025-10-13 07:53:00] 2025-10-13 11:52:01,942 | INFO     | intersect: -742934690.6930928
[2025-10-13 07:53:00] 2025-10-13 11:52:01,943 | INFO     | chi2: 0.4554172953497351
[2025-10-13 07:53:00] 2025-10-13 11:52:01,943 | INFO     | -- intersect: -742934690.6930928
[2025-10-13 07:53:00] 2025-10-13 11:52:01,943 | INFO     | current memory leak: 0.42 B/s (using 613 data points, chi2=0.46)
[2025-10-13 07:53:00] 2025-10-13 11:52:01,944 | INFO     | could have reported an average CPU frequency of 2578 MHz (25 samples)
[2025-10-13 07:53:00] 2025-10-13 11:52:01,945 | INFO     | ..............................
[2025-10-13 07:53:00] 2025-10-13 11:52:01,945 | INFO     | . Timing measurements:
[2025-10-13 07:53:00] 2025-10-13 11:52:01,945 | INFO     | . get job = 0 s
[2025-10-13 07:53:00] 2025-10-13 11:52:01,945 | INFO     | . initial setup = 6 s
[2025-10-13 07:53:00] 2025-10-13 11:52:01,945 | INFO     | . payload setup = 54 s
[2025-10-13 07:53:00] 2025-10-13 11:52:01,945 | INFO     | . stage-in = 0 s
[2025-10-13 07:53:00] 2025-10-13 11:52:01,945 | INFO     | . payload execution = 38982 s
[2025-10-13 07:53:00] 2025-10-13 11:52:01,945 | INFO     | . stage-out = 3 s
[2025-10-13 07:53:00] 2025-10-13 11:52:01,945 | INFO     | . log creation = 0 s
[2025-10-13 07:53:00] 2025-10-13 11:52:01,946 | INFO     | ..............................
[2025-10-13 07:53:00] 2025-10-13 11:52:02,159 | INFO     | PID=924363 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:53:00] 2025-10-13 11:52:02,160 | INFO     | .. there are 17 such processes running
[2025-10-13 07:53:00] 2025-10-13 11:52:02,267 | INFO     | 
[2025-10-13 07:53:00] 2025-10-13 11:52:02,267 | INFO     | job summary report
[2025-10-13 07:53:00] 2025-10-13 11:52:02,268 | INFO     | --------------------------------------------------
[2025-10-13 07:53:00] 2025-10-13 11:52:02,268 | INFO     | PanDA job id: 6840749635
[2025-10-13 07:53:00] 2025-10-13 11:52:02,268 | INFO     | task id: 46676269
[2025-10-13 07:53:00] 2025-10-13 11:52:02,268 | INFO     | errors: (none)
[2025-10-13 07:53:00] 2025-10-13 11:52:02,268 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:53:00] 2025-10-13 11:52:02,268 | INFO     | pilot state: finished 
[2025-10-13 07:53:00] 2025-10-13 11:52:02,268 | INFO     | transexitcode: 0
[2025-10-13 07:53:00] 2025-10-13 11:52:02,268 | INFO     | exeerrorcode: 0
[2025-10-13 07:53:00] 2025-10-13 11:52:02,268 | INFO     | exeerrordiag: 
[2025-10-13 07:53:00] 2025-10-13 11:52:02,268 | INFO     | exitcode: 0
[2025-10-13 07:53:00] 2025-10-13 11:52:02,268 | INFO     | exitmsg: OK
[2025-10-13 07:53:00] 2025-10-13 11:52:02,268 | INFO     | cpuconsumptiontime: 46970 s
[2025-10-13 07:53:00] 2025-10-13 11:52:02,268 | INFO     | nevents: 400
[2025-10-13 07:53:00] 2025-10-13 11:52:02,268 | INFO     | neventsw: 0
[2025-10-13 07:53:00] 2025-10-13 11:52:02,268 | INFO     | pid: 936955
[2025-10-13 07:53:00] 2025-10-13 11:52:02,269 | INFO     | pgrp: 936955
[2025-10-13 07:53:00] 2025-10-13 11:52:02,269 | INFO     | corecount: 8
[2025-10-13 07:53:00] 2025-10-13 11:52:02,269 | INFO     | event service: False
[2025-10-13 07:53:00] 2025-10-13 11:52:02,269 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348913, 13: 2348913, 25: 2348969, 36: 2348997, 39: 2349415, 48: 2349443, 39041: 2391173, 39046: 2400171, 39047: 2400227, 39059:
[2025-10-13 07:53:00] 2025-10-13 11:52:02,269 | INFO     | --------------------------------------------------
[2025-10-13 07:53:00] 2025-10-13 11:52:02,269 | INFO     | 
[2025-10-13 07:53:00] 2025-10-13 11:52:02,269 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 07:53:00] 2025-10-13 11:52:02,343 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:53:00] 2025-10-13 11:52:02,344 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:53:00] 2025-10-13 11:52:02,344 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:53:00] 2025-10-13 11:52:02,344 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:53:00] 2025-10-13 11:52:02,344 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:53:00] 2025-10-13 11:52:02,344 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:53:00] 2025-10-13 11:52:02,344 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:53:00] 2025-10-13 11:52:02,344 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:53:00] 2025-10-13 11:52:02,344 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:53:00] 2025-10-13 11:52:02,344 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:53:00] 2025-10-13 11:52:02,344 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:53:00] 2025-10-13 11:52:02,345 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:53:00] 2025-10-13 11:52:02,345 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:53:00] 2025-10-13 11:52:02,345 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:53:00] 2025-10-13 11:52:02,345 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:53:00] 2025-10-13 11:52:02,345 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:53:00] 2025-10-13 11:52:02,345 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:53:00] 2025-10-13 11:52:02,345 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:53:00] 2025-10-13 11:52:02,345 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:53:00] 2025-10-13 11:52:02,345 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:53:00] 2025-10-13 11:52:02,345 | INFO     | job 6840749635 has completed (purged errors)
[2025-10-13 07:53:00] 2025-10-13 11:52:02,345 | INFO     | overall cleanup function is called
[2025-10-13 07:53:00] 2025-10-13 11:52:03,362 | INFO     | --- collectZombieJob: --- 10, [936955]
[2025-10-13 07:53:00] 2025-10-13 11:52:03,362 | INFO     | zombie collector waiting for pid 936955
[2025-10-13 07:53:00] 2025-10-13 11:52:03,363 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:53:00] 2025-10-13 11:52:03,363 | INFO     | collected zombie processes
[2025-10-13 07:53:00] 2025-10-13 11:52:03,363 | INFO     | will attempt to kill all subprocesses of pid=936955
[2025-10-13 07:53:00] 2025-10-13 11:52:03,689 | INFO     | process IDs to be killed: [936955] (in reverse order)
[2025-10-13 07:53:00] 2025-10-13 11:52:03,844 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:53:00] 2025-10-13 11:52:03,845 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:53:00] 2025-10-13 11:52:03,872 | INFO     | did not find any defunct processes belonging to 936955
[2025-10-13 07:53:00] 2025-10-13 11:52:03,908 | INFO     | did not find any defunct processes belonging to 936955
[2025-10-13 07:53:00] 2025-10-13 11:52:03,908 | INFO     | ready for new job
[2025-10-13 07:53:00] 2025-10-13 11:52:03,908 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:53:00] 2025-10-13 11:52:03,918 | INFO     | ***************************************
[2025-10-13 07:53:00] 2025-10-13 11:52:03,918 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:53:00] 2025-10-13 11:52:03,918 | INFO     | ***************************************
[2025-10-13 07:53:00] 2025-10-13 11:52:03,918 | INFO     | 
[2025-10-13 07:53:00] 2025-10-13 11:52:03,921 | INFO     | architecture information:
[2025-10-13 07:53:00] 2025-10-13 11:52:03,922 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:53:00] 2025-10-13 11:52:03,941 | INFO     | cat /etc/os-release:
[2025-10-13 07:53:00] NAME="CentOS Linux"
[2025-10-13 07:53:00] VERSION="7 (Core)"
[2025-10-13 07:53:00] ID="centos"
[2025-10-13 07:53:00] ID_LIKE="rhel fedora"
[2025-10-13 07:53:00] VERSION_ID="7"
[2025-10-13 07:53:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:53:00] ANSI_COLOR="0;31"
[2025-10-13 07:53:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:53:00] HOME_URL="https://www.centos.org/"
[2025-10-13 07:53:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:53:00] 
[2025-10-13 07:53:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:53:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:53:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:53:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:53:00] 
[2025-10-13 07:53:00] 2025-10-13 11:52:03,942 | INFO     | ***************************************
[2025-10-13 07:53:00] 2025-10-13 11:52:04,462 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 07:53:00] 2025-10-13 11:52:04,649 | INFO     | sufficient remaining disk space (75134664704 B)
[2025-10-13 07:53:00] 2025-10-13 11:52:04,649 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:53:00] 2025-10-13 11:52:04,649 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:53:00] 2025-10-13 11:52:04,649 | INFO     | update_server=False
[2025-10-13 07:53:00] 2025-10-13 11:52:04,649 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:53:00] 2025-10-13 11:52:04,650 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:53:00] 2025-10-13 11:52:04,663 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:53:00] 2025-10-13 11:52:04,663 | INFO     | aborting loop
[2025-10-13 07:53:00] 2025-10-13 11:52:04,762 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:53:00] 2025-10-13 11:52:04,906 | INFO     | all payload control threads have been joined
[2025-10-13 07:53:00] 2025-10-13 11:52:05,391 | INFO     | all job control threads have been joined
[2025-10-13 07:53:00] 2025-10-13 11:52:05,655 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:53:00] 2025-10-13 11:52:05,669 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:53:00] 2025-10-13 11:52:05,680 | INFO     | all data control threads have been joined
[2025-10-13 07:53:00] 2025-10-13 11:52:05,844 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:53:00] 2025-10-13 11:52:05,861 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:53:00] 2025-10-13 11:52:05,920 | INFO     | [payload] control thread has finished
[2025-10-13 07:53:00] 2025-10-13 11:52:06,221 | INFO     | [job] validate thread has finished
[2025-10-13 07:53:00] 2025-10-13 11:52:06,310 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:53:00] 2025-10-13 11:52:06,399 | INFO     | [job] control thread has finished
[2025-10-13 07:53:00] 2025-10-13 11:52:06,591 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:53:00] 2025-10-13 11:52:06,600 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:53:00] 2025-10-13 11:52:06,675 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:53:00] 2025-10-13 11:52:06,685 | INFO     | [data] control thread has finished
[2025-10-13 07:53:00] 2025-10-13 11:52:06,739 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:53:00] 2025-10-13 11:52:06,906 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:53:00] 2025-10-13 11:52:07,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:53:00] 2025-10-13 11:52:08,290 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:53:00] 2025-10-13 11:52:08,771 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:53:00] 2025-10-13 11:52:35,037 | INFO     | PID=924363 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 07:53:00] 2025-10-13 11:52:35,039 | INFO     | .. there are 17 such processes running
[2025-10-13 07:53:00] 2025-10-13 11:52:35,041 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:53:00] 2025-10-13 11:52:35,041 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:53:00] 2025-10-13 11:52:35,041 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:53:00] 2025-10-13 11:52:50,376 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:53:00] 2025-10-13 11:52:52,375 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140263023863616)>', '<ExcThread(monitor, started 140262063982336)>']
[2025-10-13 07:53:00] 2025-10-13 11:52:53,150 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:53:00] 2025-10-13 11:52:53,150 | INFO     | [monitor] control thread has ended
[2025-10-13 07:53:00] 2025-10-13 11:52:57,401 | INFO     | all workflow threads have been joined
[2025-10-13 07:53:00] 2025-10-13 11:52:57,434 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:53:00] 2025-10-13 11:52:57,435 | INFO     | traces error code: 0
[2025-10-13 07:53:00] 2025-10-13 11:52:57,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:53:00] 2025-10-13 11:52:58,417 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:53:00] 2025-10-13 11:52:58,438 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:53:00] 2025-10-13 11:52:58,454 [wrapper] pilotpid: 924363
[2025-10-13 07:53:00] 2025-10-13 11:52:58,473 [wrapper] Pilot exit status: 0
[2025-10-13 07:53:00] 2025-10-13 11:52:58,553 [wrapper] pandaids: 6840749635
[2025-10-13 07:53:00] 2025-10-13 11:52:58,956 [wrapper] cleanup supervisor_pilot 2517319 924364
[2025-10-13 07:53:00] 2025-10-13 11:52:58,974 [wrapper] Test setup, not cleaning
[2025-10-13 07:53:00] 2025-10-13 11:52:58,996 [wrapper] apfmon messages muted
[2025-10-13 07:53:00] 2025-10-13 11:52:59,050 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:53:00] 2025-10-13 11:52:59,073 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:53:00]  *** Error codes and diagnostics ***
[2025-10-13 07:53:00]     "exeErrorCode": 0,
[2025-10-13 07:53:00]     "exeErrorDiag": "",
[2025-10-13 07:53:00]     "pilotErrorCode": 0,
[2025-10-13 07:53:00]     "pilotErrorDiag": "",
[2025-10-13 07:53:00]  *** Listing of results directory ***
[2025-10-13 07:53:00] total 413856
[2025-10-13 07:53:00] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 16:43 pilot3.tar.gz
[2025-10-13 07:53:00] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:48 queuedata.json
[2025-10-13 07:53:00] -rwx------. 1 boincer umatlas     36292 Oct 12 16:48 runpilot2-wrapper.sh
[2025-10-13 07:53:00] -rw-r--r--. 1 boincer umatlas       100 Oct 12 20:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:53:00] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 20:58 run_atlas
[2025-10-13 07:53:00] -rw-r--r--. 1 boincer umatlas       105 Oct 12 20:58 job.xml
[2025-10-13 07:53:00] -rw-r--r--. 2 boincer umatlas 221702211 Oct 12 20:58 EVNT.46676267._004862.pool.root.1
[2025-10-13 07:53:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:58 start_atlas.sh
[2025-10-13 07:53:00] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 20:58 shared
[2025-10-13 07:53:00] -rw-r--r--. 2 boincer umatlas    569685 Oct 12 20:58 input.tar.gz
[2025-10-13 07:53:00] -rw-r--r--. 1 boincer umatlas         0 Oct 12 20:58 boinc_lockfile
[2025-10-13 07:53:00] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 20:58 pandaJob.out
[2025-10-13 07:53:00] -rw-------. 1 boincer umatlas    975603 Oct 12 20:59 agis_schedconf.cvmfs.json
[2025-10-13 07:53:00] drwx------. 5 boincer umatlas      4096 Oct 12 20:59 pilot3
[2025-10-13 07:53:00] -rw-r--r--. 1 boincer umatlas      6843 Oct 13 07:48 init_data.xml
[2025-10-13 07:53:00] -rw-------. 1 boincer umatlas 187733998 Oct 13 07:50 HITS.46676269._089067.pool.root.1
[2025-10-13 07:53:00] -rw-r--r--. 1 boincer umatlas       531 Oct 13 07:50 boinc_task_state.xml
[2025-10-13 07:53:00] -rw-------. 1 boincer umatlas      1055 Oct 13 07:51 memory_monitor_summary.json
[2025-10-13 07:53:00] -rw-------. 1 boincer umatlas   1560580 Oct 13 07:51 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:53:00] -rw-------. 1 boincer umatlas    747331 Oct 13 07:51 log.46676269._089067.job.log.tgz.1
[2025-10-13 07:53:00] -rw-------. 1 boincer umatlas      7850 Oct 13 07:52 heartbeat.json
[2025-10-13 07:53:00] -rw-------. 1 boincer umatlas        95 Oct 13 07:52 pilot_heartbeat.json
[2025-10-13 07:53:00] -rw-r--r--. 1 boincer umatlas        28 Oct 13 07:52 wrapper_checkpoint.txt
[2025-10-13 07:53:00] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:52 boinc_mmap_file
[2025-10-13 07:53:00] -rw-------. 1 boincer umatlas      4823 Oct 13 07:52 pilotlog.txt
[2025-10-13 07:53:00] -rw-------. 1 boincer umatlas   4478236 Oct 13 07:52 log.46676269._089067.job.log.1
[2025-10-13 07:53:00] -rw-------. 1 boincer umatlas       357 Oct 13 07:52 output.list
[2025-10-13 07:53:00] -rw-r--r--. 1 boincer umatlas       620 Oct 13 07:52 runtime_log
[2025-10-13 07:53:00] -rw-------. 1 boincer umatlas   5242880 Oct 13 07:52 result.tar.gz
[2025-10-13 07:53:00] -rw-------. 1 boincer umatlas       664 Oct 13 07:52 S2rMDmuAIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5UlNDmXrEHOo.diag
[2025-10-13 07:53:00] -rw-r--r--. 1 boincer umatlas      8709 Oct 13 07:52 runtime_log.err
[2025-10-13 07:53:00] -rw-r--r--. 1 boincer umatlas     21321 Oct 13 07:53 stderr.txt
[2025-10-13 07:53:00] HITS file was successfully produced:
[2025-10-13 07:53:00] -rw-------. 1 boincer umatlas 187733998 Oct 13 07:50 shared/HITS.pool.root.1
[2025-10-13 07:53:00]  *** Contents of shared directory: ***
[2025-10-13 07:53:00] total 405544
[2025-10-13 07:53:00] -rw-r--r--. 2 boincer umatlas 221702211 Oct 12 20:58 ATLAS.root_0
[2025-10-13 07:53:00] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:58 start_atlas.sh
[2025-10-13 07:53:00] -rw-r--r--. 2 boincer umatlas    569685 Oct 12 20:58 input.tar.gz
[2025-10-13 07:53:00] -rw-------. 1 boincer umatlas 187733998 Oct 13 07:50 HITS.pool.root.1
[2025-10-13 07:53:00] -rw-------. 1 boincer umatlas   5242880 Oct 13 07:52 result.tar.gz
07:53:01 (919623): run_atlas exited; CPU time 48176.364532
07:53:01 (919623): called boinc_finish(0)

</stderr_txt>
]]>

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