Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
06:56:08 (2682082): wrapper (7.7.26015): starting
06:56:08 (2682082): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 06:56:08] Arguments: --nthreads 4
[2025-10-13 06:56:08] Threads: 4
[2025-10-13 06:56:08] Checking for CVMFS
[2025-10-13 06:56:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:56:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:56:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:56:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:56:09] 2.13.2.0 428253 5343 53084 151649 2 188 2273417 4096000 2766 130560 0 17462431 99.997 310352 2342 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 06:56:09] CVMFS is ok
[2025-10-13 06:56:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:56:09] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 06:56:09] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 06:56:09] Further information can be found at the LHC@home message board.
[2025-10-13 06:56:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:56:09] Checking for apptainer binary...
[2025-10-13 06:56:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:56:09] Running /usr/bin/apptainer --version
[2025-10-13 06:56:09] apptainer version 1.4.2
[2025-10-13 06:56:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:56:09] Ryzen-9-7950X3D-Zen4-Ubu24
[2025-10-13 06:56:09] apptainer works
[2025-10-13 06:56:09] Set ATHENA_PROC_NUMBER=4
[2025-10-13 06:56:09] Set ATHENA_CORE_NUMBER=4
[2025-10-13 06:56:09] Starting ATLAS job with PandaID=6840749170
[2025-10-13 06:56:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:16:30]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:16:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 08:16:30]  replicas=None
[2025-10-13 08:16:30]  scope=mc23_13p6TeV
[2025-10-13 08:16:30]  status=None
[2025-10-13 08:16:30]  status_code=0
[2025-10-13 08:16:30]  storage_token=
[2025-10-13 08:16:30]  surl=/var/lib/boinc-client/slots/18/PanDA_Pilot-6840749170/log.46676269._088691.job.log.tgz.1
[2025-10-13 08:16:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/fe/log.46676269._088691.job.log.tgz.1
[2025-10-13 08:16:30]  workdir=None
[2025-10-13 08:16:30] ]
[2025-10-13 08:16:30] 2025-10-13 06:15:18,489 | INFO     | transferring file log.46676269._088691.job.log.tgz.1 from /var/lib/boinc-client/slots/18/PanDA_Pilot-6840749170/log.46676269._088691.job.log.tgz.1 to /var/lib/boin
[2025-10-13 08:16:30] 2025-10-13 06:15:18,489 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/18/PanDA_Pilot-6840749170/log.46676269._088691.job.log.tgz.1 /var/lib/boinc-client/slots/18/log.4667
[2025-10-13 08:16:30] 2025-10-13 06:15:18,505 | INFO     | adding to output.list: log.46676269._088691.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/67/fe/log.46676269._088691.job.log.tg
[2025-10-13 08:16:30] 2025-10-13 06:15:18,505 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 08:16:30] 2025-10-13 06:15:18,505 | INFO     | summary of transferred files:
[2025-10-13 08:16:30] 2025-10-13 06:15:18,505 | INFO     |  -- lfn=log.46676269._088691.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 08:16:30] 2025-10-13 06:15:18,505 | INFO     | stage-out finished correctly
[2025-10-13 08:16:30] 2025-10-13 06:15:19,650 | INFO     | time since job start (4743s) is within the limit (172800.0s)
[2025-10-13 08:16:30] 2025-10-13 06:15:20,373 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 08:16:30] 2025-10-13 06:15:21,656 | INFO     | time since job start (4745s) is within the limit (172800.0s)
[2025-10-13 08:16:30] 2025-10-13 06:15:21,679 | INFO     | job 6840749170 has state=finished
[2025-10-13 08:16:30] 2025-10-13 06:15:21,680 | INFO     | preparing for final server update for job 6840749170 in state='finished'
[2025-10-13 08:16:30] 2025-10-13 06:15:21,680 | INFO     | this job has now completed (state=finished)
[2025-10-13 08:16:30] 2025-10-13 06:15:21,680 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 08:16:30] 2025-10-13 06:15:21,680 | INFO     | log transfer has been attempted: DONE
[2025-10-13 08:16:30] 2025-10-13 06:15:21,680 | INFO     | job 6840749170 has finished - writing final server update
[2025-10-13 08:16:30] 2025-10-13 06:15:21,680 | INFO     | total number of processed events: 400 (read)
[2025-10-13 08:16:30] 2025-10-13 06:15:21,684 | INFO     | executing command: lscpu
[2025-10-13 08:16:30] 2025-10-13 06:15:21,709 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 08:16:30] 2025-10-13 06:15:23,662 | INFO     | time since job start (4747s) is within the limit (172800.0s)
[2025-10-13 08:16:30] 2025-10-13 06:15:24,144 | WARNING  | process 2692904 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 08:16:30] 2025-10-13 06:15:24,145 | INFO     | using path: /var/lib/boinc-client/slots/18/PanDA_Pilot-6840749170/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 08:16:30] 2025-10-13 06:15:24,208 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 08:16:30] 2025-10-13 06:15:24,211 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4453.26725
[2025-10-13 08:16:30] 2025-10-13 06:15:24,214 | INFO     | using path: /var/lib/boinc-client/slots/18/PanDA_Pilot-6840749170/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 08:16:30] 2025-10-13 06:15:24,214 | INFO     | extracted standard info from prmon json
[2025-10-13 08:16:30] 2025-10-13 06:15:24,214 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 08:16:30] 2025-10-13 06:15:24,214 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 08:16:30] 2025-10-13 06:15:24,215 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:16:30] 2025-10-13 06:15:24,215 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:16:30] 2025-10-13 06:15:24,215 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:16:30] 2025-10-13 06:15:24,215 | INFO     | sum of square deviations: 110960220.0
[2025-10-13 08:16:30] 2025-10-13 06:15:24,216 | INFO     | sum of deviations: -2496626055.9999995
[2025-10-13 08:16:30] 2025-10-13 06:15:24,216 | INFO     | mean x: 1760333836.0
[2025-10-13 08:16:30] 2025-10-13 06:15:24,216 | INFO     | mean y: 2356290.295774648
[2025-10-13 08:16:30] 2025-10-13 06:15:24,216 | INFO     | -- intersect: 39610202437.46482
[2025-10-13 08:16:30] 2025-10-13 06:15:24,216 | INFO     | intersect: 39610202437.46482
[2025-10-13 08:16:30] 2025-10-13 06:15:24,216 | INFO     | chi2: 0.01416418607136792
[2025-10-13 08:16:30] 2025-10-13 06:15:24,216 | INFO     | -- intersect: 39610202437.46482
[2025-10-13 08:16:30] 2025-10-13 06:15:24,216 | INFO     | current memory leak: -22.50 B/s (using 71 data points, chi2=0.01)
[2025-10-13 08:16:30] 2025-10-13 06:15:24,216 | INFO     | could have reported an average CPU frequency of 4413 MHz (6 samples)
[2025-10-13 08:16:30] 2025-10-13 06:15:24,216 | INFO     | ..............................
[2025-10-13 08:16:30] 2025-10-13 06:15:24,216 | INFO     | . Timing measurements:
[2025-10-13 08:16:30] 2025-10-13 06:15:24,216 | INFO     | . get job = 0 s
[2025-10-13 08:16:30] 2025-10-13 06:15:24,216 | INFO     | . initial setup = 1 s
[2025-10-13 08:16:30] 2025-10-13 06:15:24,216 | INFO     | . payload setup = 3 s
[2025-10-13 08:16:30] 2025-10-13 06:15:24,216 | INFO     | . stage-in = 0 s
[2025-10-13 08:16:30] 2025-10-13 06:15:24,216 | INFO     | . payload execution = 4721 s
[2025-10-13 08:16:30] 2025-10-13 06:15:24,216 | INFO     | . stage-out = 0 s
[2025-10-13 08:16:30] 2025-10-13 06:15:24,216 | INFO     | . log creation = 0 s
[2025-10-13 08:16:30] 2025-10-13 06:15:24,216 | INFO     | ..............................
[2025-10-13 08:16:30] 2025-10-13 06:15:24,255 | INFO     | number of running child processes to parent process 2692904: 1
[2025-10-13 08:16:30] 2025-10-13 06:15:24,256 | INFO     | maximum number of monitored processes: 6
[2025-10-13 08:16:30] 2025-10-13 06:15:24,256 | INFO     | aborting job monitoring since job object (job id=6840749170) has expired
[2025-10-13 08:16:30] 2025-10-13 06:15:24,310 | INFO     | 
[2025-10-13 08:16:30] 2025-10-13 06:15:24,310 | INFO     | job summary report
[2025-10-13 08:16:30] 2025-10-13 06:15:24,310 | INFO     | --------------------------------------------------
[2025-10-13 08:16:30] 2025-10-13 06:15:24,310 | INFO     | PanDA job id: 6840749170
[2025-10-13 08:16:30] 2025-10-13 06:15:24,310 | INFO     | task id: 46676269
[2025-10-13 08:16:30] 2025-10-13 06:15:24,310 | INFO     | errors: (none)
[2025-10-13 08:16:30] 2025-10-13 06:15:24,310 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:16:30] 2025-10-13 06:15:24,310 | INFO     | pilot state: finished 
[2025-10-13 08:16:30] 2025-10-13 06:15:24,310 | INFO     | transexitcode: 0
[2025-10-13 08:16:30] 2025-10-13 06:15:24,310 | INFO     | exeerrorcode: 0
[2025-10-13 08:16:30] 2025-10-13 06:15:24,310 | INFO     | exeerrordiag: 
[2025-10-13 08:16:30] 2025-10-13 06:15:24,310 | INFO     | exitcode: 0
[2025-10-13 08:16:30] 2025-10-13 06:15:24,310 | INFO     | exitmsg: OK
[2025-10-13 08:16:30] 2025-10-13 06:15:24,310 | INFO     | cpuconsumptiontime: 18276 s
[2025-10-13 08:16:30] 2025-10-13 06:15:24,310 | INFO     | nevents: 400
[2025-10-13 08:16:30] 2025-10-13 06:15:24,310 | INFO     | neventsw: 0
[2025-10-13 08:16:30] 2025-10-13 06:15:24,310 | INFO     | pid: 2692904
[2025-10-13 08:16:30] 2025-10-13 06:15:24,310 | INFO     | pgrp: 2692904
[2025-10-13 08:16:30] 2025-10-13 06:15:24,310 | INFO     | corecount: 4
[2025-10-13 08:16:30] 2025-10-13 06:15:24,310 | INFO     | event service: False
[2025-10-13 08:16:30] 2025-10-13 06:15:24,311 | INFO     | sizes: {0: 2348865, 2: 2349127, 11: 2349155, 4728: 2384548, 4730: 2384548, 4734: 2384742}
[2025-10-13 08:16:30] 2025-10-13 06:15:24,311 | INFO     | --------------------------------------------------
[2025-10-13 08:16:30] 2025-10-13 06:15:24,311 | INFO     | 
[2025-10-13 08:16:30] 2025-10-13 06:15:24,311 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/18
[2025-10-13 08:16:30] 2025-10-13 06:15:24,328 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:16:30] 2025-10-13 06:15:24,328 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:16:30] 2025-10-13 06:15:24,328 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:16:30] 2025-10-13 06:15:24,328 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:16:30] 2025-10-13 06:15:24,328 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:16:30] 2025-10-13 06:15:24,328 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:16:30] 2025-10-13 06:15:24,329 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:16:30] 2025-10-13 06:15:24,329 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:16:30] 2025-10-13 06:15:24,329 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:16:30] 2025-10-13 06:15:24,329 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:16:30] 2025-10-13 06:15:24,329 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:16:30] 2025-10-13 06:15:24,329 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:16:30] 2025-10-13 06:15:24,329 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:16:30] 2025-10-13 06:15:24,329 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:16:30] 2025-10-13 06:15:24,329 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:16:30] 2025-10-13 06:15:24,329 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:16:30] 2025-10-13 06:15:24,329 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:16:30] 2025-10-13 06:15:24,329 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:16:30] 2025-10-13 06:15:24,329 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:16:30] 2025-10-13 06:15:24,329 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:16:30] 2025-10-13 06:15:24,329 | INFO     | job 6840749170 has completed (purged errors)
[2025-10-13 08:16:30] 2025-10-13 06:15:24,329 | INFO     | overall cleanup function is called
[2025-10-13 08:16:30] 2025-10-13 06:15:25,335 | INFO     | --- collectZombieJob: --- 10, [2692904]
[2025-10-13 08:16:30] 2025-10-13 06:15:25,335 | INFO     | zombie collector waiting for pid 2692904
[2025-10-13 08:16:30] 2025-10-13 06:15:25,335 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:16:30] 2025-10-13 06:15:25,336 | INFO     | collected zombie processes
[2025-10-13 08:16:30] 2025-10-13 06:15:25,336 | INFO     | will attempt to kill all subprocesses of pid=2692904
[2025-10-13 08:16:30] 2025-10-13 06:15:25,389 | INFO     | process IDs to be killed: [2692904] (in reverse order)
[2025-10-13 08:16:30] 2025-10-13 06:15:25,463 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:16:30] 2025-10-13 06:15:25,463 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:16:30] 2025-10-13 06:15:25,466 | INFO     | did not find any defunct processes belonging to 2692904
[2025-10-13 08:16:30] 2025-10-13 06:15:25,467 | INFO     | did not find any defunct processes belonging to 2692904
[2025-10-13 08:16:30] 2025-10-13 06:15:25,467 | INFO     | ready for new job
[2025-10-13 08:16:30] 2025-10-13 06:15:25,467 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:16:30] 2025-10-13 06:15:25,468 | INFO     | ***************************************
[2025-10-13 08:16:30] 2025-10-13 06:15:25,468 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:16:30] 2025-10-13 06:15:25,468 | INFO     | ***************************************
[2025-10-13 08:16:30] 2025-10-13 06:15:25,468 | INFO     | 
[2025-10-13 08:16:30] 2025-10-13 06:15:25,469 | INFO     | architecture information:
[2025-10-13 08:16:30] 2025-10-13 06:15:25,473 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:16:30] 2025-10-13 06:15:25,494 | INFO     | cat /etc/os-release:
[2025-10-13 08:16:30] NAME="CentOS Linux"
[2025-10-13 08:16:30] VERSION="7 (Core)"
[2025-10-13 08:16:30] ID="centos"
[2025-10-13 08:16:30] ID_LIKE="rhel fedora"
[2025-10-13 08:16:30] VERSION_ID="7"
[2025-10-13 08:16:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:16:30] ANSI_COLOR="0;31"
[2025-10-13 08:16:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:16:30] HOME_URL="https://www.centos.org/"
[2025-10-13 08:16:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:16:30] 
[2025-10-13 08:16:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:16:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:16:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:16:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:16:30] 
[2025-10-13 08:16:30] 2025-10-13 06:15:25,494 | INFO     | ***************************************
[2025-10-13 08:16:30] 2025-10-13 06:15:25,996 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/18
[2025-10-13 08:16:30] 2025-10-13 06:15:26,026 | INFO     | sufficient remaining disk space (1766230851584 B)
[2025-10-13 08:16:30] 2025-10-13 06:15:26,027 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:16:30] 2025-10-13 06:15:26,027 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:16:30] 2025-10-13 06:15:26,027 | INFO     | update_server=False
[2025-10-13 08:16:30] 2025-10-13 06:15:26,027 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:16:30] 2025-10-13 06:15:26,027 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:16:30] 2025-10-13 06:15:26,028 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:16:30] 2025-10-13 06:15:26,028 | INFO     | aborting loop
[2025-10-13 08:16:30] 2025-10-13 06:15:26,035 | INFO     | all data control threads have been joined
[2025-10-13 08:16:30] 2025-10-13 06:15:26,163 | INFO     | all payload control threads have been joined
[2025-10-13 08:16:30] 2025-10-13 06:15:26,414 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:16:30] 2025-10-13 06:15:26,549 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:16:30] 2025-10-13 06:15:27,031 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:16:30] 2025-10-13 06:15:27,033 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:16:30] 2025-10-13 06:15:27,034 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:16:30] 2025-10-13 06:15:27,039 | INFO     | [data] control thread has finished
[2025-10-13 08:16:30] 2025-10-13 06:15:27,051 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:16:30] 2025-10-13 06:15:27,169 | INFO     | [payload] control thread has finished
[2025-10-13 08:16:30] 2025-10-13 06:15:27,186 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:16:30] 2025-10-13 06:15:27,211 | INFO     | all job control threads have been joined
[2025-10-13 08:16:30] 2025-10-13 06:15:27,850 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:16:30] 2025-10-13 06:15:28,097 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:16:30] 2025-10-13 06:15:28,151 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:16:30] 2025-10-13 06:15:28,215 | INFO     | [job] control thread has finished
[2025-10-13 08:16:30] 2025-10-13 06:15:28,286 | INFO     | [job] validate thread has finished
[2025-10-13 08:16:30] 2025-10-13 06:15:28,454 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:16:30] 2025-10-13 06:15:28,555 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:16:30] 2025-10-13 06:15:30,419 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:16:30] 2025-10-13 06:15:36,201 | INFO     | job.realtimelogging is not enabled
[2025-10-13 08:16:30] 2025-10-13 06:15:37,206 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:16:30] 2025-10-13 06:15:56,807 | INFO     | PID=2686260 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:16:30] 2025-10-13 06:15:56,807 | INFO     | .. there are 4 such processes running
[2025-10-13 08:16:30] 2025-10-13 06:15:56,808 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:16:30] 2025-10-13 06:15:56,809 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:16:30] 2025-10-13 06:15:56,809 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:16:30] 2025-10-13 06:16:24,044 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:16:30] 2025-10-13 06:16:25,819 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129193784088384)>', '<ExcThread(monitor, started 129192993736448)>']
[2025-10-13 08:16:30] 2025-10-13 06:16:25,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:16:30] 2025-10-13 06:16:25,948 | INFO     | [monitor] control thread has ended
[2025-10-13 08:16:30] 2025-10-13 06:16:30,834 | INFO     | all workflow threads have been joined
[2025-10-13 08:16:30] 2025-10-13 06:16:30,834 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:16:30] 2025-10-13 06:16:30,835 | INFO     | traces error code: 0
[2025-10-13 08:16:30] 2025-10-13 06:16:30,835 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:16:30] 2025-10-13 06:16:30,885 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:16:30] 2025-10-13 06:16:30,888 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:16:30] 2025-10-13 06:16:30,891 [wrapper] pilotpid: 2686260
[2025-10-13 08:16:30] 2025-10-13 06:16:30,892 [wrapper] Pilot exit status: 0
[2025-10-13 08:16:30] 2025-10-13 06:16:30,899 [wrapper] pandaids: 6840749170
[2025-10-13 08:16:30] 2025-10-13 06:16:30,925 [wrapper] cleanup supervisor_pilot 2778209 2686261
[2025-10-13 08:16:30] 2025-10-13 06:16:30,927 [wrapper] Test setup, not cleaning
[2025-10-13 08:16:30] 2025-10-13 06:16:30,930 [wrapper] apfmon messages muted
[2025-10-13 08:16:30] 2025-10-13 06:16:30,932 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:16:30] 2025-10-13 06:16:30,934 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:16:30]  *** Error codes and diagnostics ***
[2025-10-13 08:16:30]     "exeErrorCode": 0,
[2025-10-13 08:16:30]     "exeErrorDiag": "",
[2025-10-13 08:16:30]     "pilotErrorCode": 0,
[2025-10-13 08:16:30]     "pilotErrorDiag": "",
[2025-10-13 08:16:30]  *** Listing of results directory ***
[2025-10-13 08:16:30] total 408200
[2025-10-13 08:16:30] -rw-r--r-- 1 boinc boinc    557409 Oct 12 22:23 pilot3.tar.gz
[2025-10-13 08:16:30] -rw-r--r-- 1 boinc boinc      5112 Oct 12 22:28 queuedata.json
[2025-10-13 08:16:30] -rwx------ 1 boinc boinc     36292 Oct 12 22:30 runpilot2-wrapper.sh
[2025-10-13 08:16:30] -rw-r--r-- 1 boinc boinc       100 Oct 13 06:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:16:30] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 06:56 run_atlas
[2025-10-13 08:16:30] -rw-r--r-- 1 boinc boinc       105 Oct 13 06:56 job.xml
[2025-10-13 08:16:30] -rw-r--r-- 2 boinc boinc 218589888 Oct 13 06:56 EVNT.46676267._004500.pool.root.1
[2025-10-13 08:16:30] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:56 start_atlas.sh
[2025-10-13 08:16:30] drwxrwx--x 2 boinc boinc      4096 Oct 13 06:56 shared
[2025-10-13 08:16:30] -rw-r--r-- 2 boinc boinc    569680 Oct 13 06:56 input.tar.gz
[2025-10-13 08:16:30] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:56 boinc_lockfile
[2025-10-13 08:16:30] -rw-r--r-- 1 boinc boinc      2550 Oct 13 06:56 pandaJob.out
[2025-10-13 08:16:30] -rw------- 1 boinc boinc    974365 Oct 13 06:56 agis_schedconf.cvmfs.json
[2025-10-13 08:16:30] -rw------- 1 boinc boinc   1560580 Oct 13 06:56 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:16:30] drwx------ 5 boinc boinc      4096 Oct 13 06:56 pilot3
[2025-10-13 08:16:30] -rw-r--r-- 1 boinc boinc      9521 Oct 13 08:13 init_data.xml
[2025-10-13 08:16:30] -rw------- 1 boinc boinc 193536931 Oct 13 08:14 HITS.46676269._088691.pool.root.1
[2025-10-13 08:16:30] -rw-r--r-- 1 boinc boinc       529 Oct 13 08:15 boinc_task_state.xml
[2025-10-13 08:16:30] -rw------- 1 boinc boinc      1026 Oct 13 08:15 memory_monitor_summary.json
[2025-10-13 08:16:30] -rw------- 1 boinc boinc    261508 Oct 13 08:15 log.46676269._088691.job.log.tgz.1
[2025-10-13 08:16:30] -rw------- 1 boinc boinc      7781 Oct 13 08:15 heartbeat.json
[2025-10-13 08:16:30] -rw------- 1 boinc boinc        95 Oct 13 08:15 pilot_heartbeat.json
[2025-10-13 08:16:30] -rw-r--r-- 1 boinc boinc      8192 Oct 13 08:16 boinc_mmap_file
[2025-10-13 08:16:30] -rw-r--r-- 1 boinc boinc        27 Oct 13 08:16 wrapper_checkpoint.txt
[2025-10-13 08:16:30] -rw------- 1 boinc boinc      4905 Oct 13 08:16 pilotlog.txt
[2025-10-13 08:16:30] -rw------- 1 boinc boinc    718961 Oct 13 08:16 log.46676269._088691.job.log.1
[2025-10-13 08:16:30] -rw------- 1 boinc boinc       357 Oct 13 08:16 output.list
[2025-10-13 08:16:30] -rw-r--r-- 1 boinc boinc       620 Oct 13 08:16 runtime_log
[2025-10-13 08:16:30] -rw------- 1 boinc boinc   1003520 Oct 13 08:16 result.tar.gz
[2025-10-13 08:16:30] -rw-r--r-- 1 boinc boinc      8855 Oct 13 08:16 runtime_log.err
[2025-10-13 08:16:30] -rw------- 1 boinc boinc       656 Oct 13 08:16 1qDMDmmsHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1SlNDmYjz35m.diag
[2025-10-13 08:16:30] -rw-r--r-- 1 boinc boinc     21946 Oct 13 08:16 stderr.txt
[2025-10-13 08:16:30] HITS file was successfully produced:
[2025-10-13 08:16:30] -rw------- 1 boinc boinc 193536931 Oct 13 08:14 shared/HITS.pool.root.1
[2025-10-13 08:16:30]  *** Contents of shared directory: ***
[2025-10-13 08:16:30] total 404036
[2025-10-13 08:16:30] -rw-r--r-- 2 boinc boinc 218589888 Oct 13 06:56 ATLAS.root_0
[2025-10-13 08:16:30] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:56 start_atlas.sh
[2025-10-13 08:16:30] -rw-r--r-- 2 boinc boinc    569680 Oct 13 06:56 input.tar.gz
[2025-10-13 08:16:30] -rw------- 1 boinc boinc 193536931 Oct 13 08:14 HITS.pool.root.1
[2025-10-13 08:16:30] -rw------- 1 boinc boinc   1003520 Oct 13 08:16 result.tar.gz
08:16:32 (2682082): run_atlas exited; CPU time 18297.106123
08:16:32 (2682082): called boinc_finish(0)

</stderr_txt>
]]>

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