Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:36:39 (12508): wrapper (7.7.26015): starting
20:36:39 (12508): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:36:39] Arguments: --nthreads 8
[2025-10-12 20:36:39] Threads: 8
[2025-10-12 20:36:39] Checking for CVMFS
[2025-10-12 20:36:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:36:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:36:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:36:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:36:39] 2.11.2.0 8539 53643 132912 151642 2 188 11644987 18432001 1789 130560 0 50978717 99.975 2291189 37387 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 20:36:39] CVMFS is ok
[2025-10-12 20:36:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:36:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:36:39] Further information can be found at the LHC@home message board.
[2025-10-12 20:36:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:36:39] Checking for apptainer binary...
[2025-10-12 20:36:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:36:39] Running /usr/bin/apptainer --version
[2025-10-12 20:36:39] apptainer version 1.3.2-1.el7
[2025-10-12 20:36:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:36:40] c-206-1.aglt2.org
[2025-10-12 20:36:40] apptainer works
[2025-10-12 20:36:40] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:36:40] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:36:40] Starting ATLAS job with PandaID=6840536038
[2025-10-12 20:36:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:25:13]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:25:13] 2025-10-13 03:24:07,693 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:25:13] 2025-10-13 03:24:07,697 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:25:13] 2025-10-13 03:24:07,698 | INFO     | sum of square deviations: 1367709365.0
[2025-10-12 23:25:13] 2025-10-13 03:24:07,699 | INFO     | sum of deviations: 12266646373.5
[2025-10-12 23:25:13] 2025-10-13 03:24:07,700 | INFO     | mean x: 1760320805.5
[2025-10-12 23:25:13] 2025-10-13 03:24:07,700 | INFO     | mean y: 2509840.774390244
[2025-10-12 23:25:13] 2025-10-13 03:24:07,700 | INFO     | -- intersect: -15785371252.65014
[2025-10-12 23:25:13] 2025-10-13 03:24:07,700 | INFO     | intersect: -15785371252.65014
[2025-10-12 23:25:13] 2025-10-13 03:24:07,701 | INFO     | chi2: 1.2949978658411023
[2025-10-12 23:25:13] 2025-10-13 03:24:07,701 | INFO     | sum of square deviations: 1246386160.0
[2025-10-12 23:25:13] 2025-10-13 03:24:07,702 | INFO     | sum of deviations: 11896602286.999998
[2025-10-12 23:25:13] 2025-10-13 03:24:07,703 | INFO     | mean x: 1760320653.0
[2025-10-12 23:25:13] 2025-10-13 03:24:07,703 | INFO     | mean y: 2509375.5534591195
[2025-10-12 23:25:13] 2025-10-13 03:24:07,703 | INFO     | -- intersect: -16799534307.548037
[2025-10-12 23:25:13] 2025-10-13 03:24:07,703 | INFO     | intersect: -16799534307.548037
[2025-10-12 23:25:13] 2025-10-13 03:24:07,704 | INFO     | chi2: 1.2960766679469815
[2025-10-12 23:25:13] 2025-10-13 03:24:07,704 | INFO     | current chi2=1.2960766679469815 (change=-0.08330531920826767 %)
[2025-10-12 23:25:13] 2025-10-13 03:24:07,704 | INFO     | right removable region: 158
[2025-10-12 23:25:13] 2025-10-13 03:24:07,704 | INFO     | sum of square deviations: 1246386160.0
[2025-10-12 23:25:13] 2025-10-13 03:24:07,706 | INFO     | sum of deviations: -10268016296.000002
[2025-10-12 23:25:13] 2025-10-13 03:24:07,706 | INFO     | mean x: 1760320958.0
[2025-10-12 23:25:13] 2025-10-13 03:24:07,706 | INFO     | mean y: 2537784.0754716983
[2025-10-12 23:25:13] 2025-10-13 03:24:07,706 | INFO     | -- intersect: 14504467332.887484
[2025-10-12 23:25:13] 2025-10-13 03:24:07,706 | INFO     | intersect: 14504467332.887484
[2025-10-12 23:25:13] 2025-10-13 03:24:07,707 | INFO     | chi2: 0.04794933992823654
[2025-10-12 23:25:13] 2025-10-13 03:24:07,707 | INFO     | current chi2=0.04794933992823654 (change=96.29734216611288 %)
[2025-10-12 23:25:13] 2025-10-13 03:24:07,707 | INFO     | sum of square deviations: 1132458442.5
[2025-10-12 23:25:13] 2025-10-13 03:24:07,709 | INFO     | sum of deviations: -10877155372.499998
[2025-10-12 23:25:13] 2025-10-13 03:24:07,709 | INFO     | mean x: 1760321110.5
[2025-10-12 23:25:13] 2025-10-13 03:24:07,709 | INFO     | mean y: 2538546.0064935065
[2025-10-12 23:25:13] 2025-10-13 03:24:07,709 | INFO     | -- intersect: 16910254984.70507
[2025-10-12 23:25:13] 2025-10-13 03:24:07,709 | INFO     | intersect: 16910254984.70507
[2025-10-12 23:25:13] 2025-10-13 03:24:07,710 | INFO     | chi2: 0.033913390480758004
[2025-10-12 23:25:13] 2025-10-13 03:24:07,710 | INFO     | current chi2=0.033913390480758004 (change=29.272456030647053 %)
[2025-10-12 23:25:13] 2025-10-13 03:24:07,710 | INFO     | sum of square deviations: 1025693650.0
[2025-10-12 23:25:13] 2025-10-13 03:24:07,712 | INFO     | sum of deviations: -9185112454.0
[2025-10-12 23:25:13] 2025-10-13 03:24:07,712 | INFO     | mean x: 1760321263.0
[2025-10-12 23:25:13] 2025-10-13 03:24:07,712 | INFO     | mean y: 2536124.013422819
[2025-10-12 23:25:13] 2025-10-13 03:24:07,712 | INFO     | -- intersect: 15766257344.109022
[2025-10-12 23:25:13] 2025-10-13 03:24:07,712 | INFO     | intersect: 15766257344.109022
[2025-10-12 23:25:13] 2025-10-13 03:24:07,713 | INFO     | chi2: 0.03319271119060739
[2025-10-12 23:25:13] 2025-10-13 03:24:07,713 | INFO     | current chi2=0.03319271119060739 (change=2.125058214275324 %)
[2025-10-12 23:25:13] 2025-10-13 03:24:07,713 | INFO     | left removable region: 30
[2025-10-12 23:25:13] 2025-10-13 03:24:07,714 | INFO     | sum of square deviations: 650252192.0
[2025-10-12 23:25:13] 2025-10-13 03:24:07,714 | INFO     | sum of deviations: -2821528343.0
[2025-10-12 23:25:13] 2025-10-13 03:24:07,715 | INFO     | mean x: 1760321537.5
[2025-10-12 23:25:13] 2025-10-13 03:24:07,715 | INFO     | mean y: 2525743.8125
[2025-10-12 23:25:13] 2025-10-13 03:24:07,715 | INFO     | -- intersect: 7640788516.250163
[2025-10-12 23:25:13] 2025-10-13 03:24:07,715 | INFO     | intersect: 7640788516.250163
[2025-10-12 23:25:13] 2025-10-13 03:24:07,716 | INFO     | chi2: 0.02199531535448008
[2025-10-12 23:25:13] 2025-10-13 03:24:07,716 | INFO     | -- intersect: 7640788516.250163
[2025-10-12 23:25:13] 2025-10-13 03:24:07,716 | INFO     | current memory leak: -4.34 B/s (using 128 data points, chi2=0.02)
[2025-10-12 23:25:13] 2025-10-13 03:24:07,717 | INFO     | could have reported an average CPU frequency of 2453 MHz (9 samples)
[2025-10-12 23:25:13] 2025-10-13 03:24:07,717 | INFO     | ..............................
[2025-10-12 23:25:13] 2025-10-13 03:24:07,717 | INFO     | . Timing measurements:
[2025-10-12 23:25:13] 2025-10-13 03:24:07,717 | INFO     | . get job = 0 s
[2025-10-12 23:25:13] 2025-10-13 03:24:07,717 | INFO     | . initial setup = 2 s
[2025-10-12 23:25:13] 2025-10-13 03:24:07,718 | INFO     | . payload setup = 4 s
[2025-10-12 23:25:13] 2025-10-13 03:24:07,718 | INFO     | . stage-in = 0 s
[2025-10-12 23:25:13] 2025-10-13 03:24:07,718 | INFO     | . payload execution = 10006 s
[2025-10-12 23:25:13] 2025-10-13 03:24:07,718 | INFO     | . stage-out = 0 s
[2025-10-12 23:25:13] 2025-10-13 03:24:07,718 | INFO     | . log creation = 0 s
[2025-10-12 23:25:13] 2025-10-13 03:24:07,718 | INFO     | ..............................
[2025-10-12 23:25:13] 2025-10-13 03:24:07,796 | INFO     | 
[2025-10-12 23:25:13] 2025-10-13 03:24:07,796 | INFO     | job summary report
[2025-10-12 23:25:13] 2025-10-13 03:24:07,797 | INFO     | --------------------------------------------------
[2025-10-12 23:25:13] 2025-10-13 03:24:07,797 | INFO     | PanDA job id: 6840536038
[2025-10-12 23:25:13] 2025-10-13 03:24:07,797 | INFO     | task id: 46676269
[2025-10-12 23:25:13] 2025-10-13 03:24:07,797 | INFO     | errors: (none)
[2025-10-12 23:25:13] 2025-10-13 03:24:07,797 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:25:13] 2025-10-13 03:24:07,797 | INFO     | pilot state: finished 
[2025-10-12 23:25:13] 2025-10-13 03:24:07,797 | INFO     | transexitcode: 0
[2025-10-12 23:25:13] 2025-10-13 03:24:07,797 | INFO     | exeerrorcode: 0
[2025-10-12 23:25:13] 2025-10-13 03:24:07,797 | INFO     | exeerrordiag: 
[2025-10-12 23:25:13] 2025-10-13 03:24:07,797 | INFO     | exitcode: 0
[2025-10-12 23:25:13] 2025-10-13 03:24:07,798 | INFO     | exitmsg: OK
[2025-10-12 23:25:13] 2025-10-13 03:24:07,798 | INFO     | cpuconsumptiontime: 76027 s
[2025-10-12 23:25:13] 2025-10-13 03:24:07,798 | INFO     | nevents: 400
[2025-10-12 23:25:13] 2025-10-13 03:24:07,798 | INFO     | neventsw: 0
[2025-10-12 23:25:13] 2025-10-13 03:24:07,798 | INFO     | pid: 22775
[2025-10-12 23:25:13] 2025-10-13 03:24:07,798 | INFO     | pgrp: 22775
[2025-10-12 23:25:13] 2025-10-13 03:24:07,798 | INFO     | corecount: 8
[2025-10-12 23:25:13] 2025-10-13 03:24:07,798 | INFO     | event service: False
[2025-10-12 23:25:13] 2025-10-13 03:24:07,798 | INFO     | sizes: {0: 2348857, 1: 2348857, 3: 2349147, 11: 2349175, 10014: 2377837, 10015: 2377836, 10016: 2387018, 10018: 2387074, 10023: 2387332}
[2025-10-12 23:25:13] 2025-10-13 03:24:07,798 | INFO     | --------------------------------------------------
[2025-10-12 23:25:13] 2025-10-13 03:24:07,799 | INFO     | 
[2025-10-12 23:25:13] 2025-10-13 03:24:07,799 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 23:25:13] 2025-10-13 03:24:07,815 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:25:13] 2025-10-13 03:24:07,816 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:25:13] 2025-10-13 03:24:07,816 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:25:13] 2025-10-13 03:24:07,816 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:25:13] 2025-10-13 03:24:07,816 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:25:13] 2025-10-13 03:24:07,816 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:25:13] 2025-10-13 03:24:07,816 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:25:13] 2025-10-13 03:24:07,816 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:25:13] 2025-10-13 03:24:07,816 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:25:13] 2025-10-13 03:24:07,816 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:25:13] 2025-10-13 03:24:07,817 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:25:13] 2025-10-13 03:24:07,817 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:25:13] 2025-10-13 03:24:07,817 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:25:13] 2025-10-13 03:24:07,817 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:25:13] 2025-10-13 03:24:07,817 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:25:13] 2025-10-13 03:24:07,817 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:25:13] 2025-10-13 03:24:07,817 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:25:13] 2025-10-13 03:24:07,817 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:25:13] 2025-10-13 03:24:07,817 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:25:13] 2025-10-13 03:24:07,818 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:25:13] 2025-10-13 03:24:07,818 | INFO     | job 6840536038 has completed (purged errors)
[2025-10-12 23:25:13] 2025-10-13 03:24:07,818 | INFO     | overall cleanup function is called
[2025-10-12 23:25:13] 2025-10-13 03:24:08,825 | INFO     | --- collectZombieJob: --- 10, [22775]
[2025-10-12 23:25:13] 2025-10-13 03:24:08,825 | INFO     | zombie collector waiting for pid 22775
[2025-10-12 23:25:13] 2025-10-13 03:24:08,825 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:25:13] 2025-10-13 03:24:08,825 | INFO     | collected zombie processes
[2025-10-12 23:25:13] 2025-10-13 03:24:08,825 | INFO     | will attempt to kill all subprocesses of pid=22775
[2025-10-12 23:25:13] 2025-10-13 03:24:08,931 | INFO     | process IDs to be killed: [22775] (in reverse order)
[2025-10-12 23:25:13] 2025-10-13 03:24:08,971 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:25:13] 2025-10-13 03:24:08,972 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:25:13] 2025-10-13 03:24:08,974 | INFO     | did not find any defunct processes belonging to 22775
[2025-10-12 23:25:13] 2025-10-13 03:24:08,977 | INFO     | did not find any defunct processes belonging to 22775
[2025-10-12 23:25:13] 2025-10-13 03:24:08,977 | INFO     | ready for new job
[2025-10-12 23:25:13] 2025-10-13 03:24:08,977 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:25:13] 2025-10-13 03:24:08,978 | INFO     | ***************************************
[2025-10-12 23:25:13] 2025-10-13 03:24:08,978 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:25:13] 2025-10-13 03:24:08,979 | INFO     | ***************************************
[2025-10-12 23:25:13] 2025-10-13 03:24:08,979 | INFO     | 
[2025-10-12 23:25:13] 2025-10-13 03:24:08,979 | INFO     | architecture information:
[2025-10-12 23:25:13] 2025-10-13 03:24:08,980 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:25:13] 2025-10-13 03:24:08,990 | INFO     | cat /etc/os-release:
[2025-10-12 23:25:13] NAME="CentOS Linux"
[2025-10-12 23:25:13] VERSION="7 (Core)"
[2025-10-12 23:25:13] ID="centos"
[2025-10-12 23:25:13] ID_LIKE="rhel fedora"
[2025-10-12 23:25:13] VERSION_ID="7"
[2025-10-12 23:25:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:25:13] ANSI_COLOR="0;31"
[2025-10-12 23:25:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:25:13] HOME_URL="https://www.centos.org/"
[2025-10-12 23:25:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:25:13] 
[2025-10-12 23:25:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:25:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:25:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:25:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:25:13] 
[2025-10-12 23:25:13] 2025-10-13 03:24:08,990 | INFO     | ***************************************
[2025-10-12 23:25:13] 2025-10-13 03:24:09,493 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 23:25:13] 2025-10-13 03:24:09,505 | INFO     | sufficient remaining disk space (28386000896 B)
[2025-10-12 23:25:13] 2025-10-13 03:24:09,505 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:25:13] 2025-10-13 03:24:09,505 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:25:13] 2025-10-13 03:24:09,506 | INFO     | update_server=False
[2025-10-12 23:25:13] 2025-10-13 03:24:09,506 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:25:13] 2025-10-13 03:24:09,506 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:25:13] 2025-10-13 03:24:09,506 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:25:13] 2025-10-13 03:24:09,517 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 23:25:13] 2025-10-13 03:24:09,517 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 23:25:13] 2025-10-13 03:24:09,517 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:25:13] 2025-10-13 03:24:09,518 | INFO     | will abort loop
[2025-10-12 23:25:13] 2025-10-13 03:24:09,523 | INFO     | all data control threads have been joined
[2025-10-12 23:25:13] 2025-10-13 03:24:10,104 | INFO     | all job control threads have been joined
[2025-10-12 23:25:13] 2025-10-13 03:24:10,509 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:25:13] 2025-10-13 03:24:10,511 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:25:13] 2025-10-13 03:24:10,518 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:25:13] 2025-10-13 03:24:10,528 | INFO     | [data] control thread has finished
[2025-10-12 23:25:13] 2025-10-13 03:24:10,849 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:25:13] 2025-10-13 03:24:10,854 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:25:13] 2025-10-13 03:24:10,893 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:25:13] 2025-10-13 03:24:10,962 | INFO     | all payload control threads have been joined
[2025-10-12 23:25:13] 2025-10-13 03:24:11,012 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:25:13] 2025-10-13 03:24:11,110 | INFO     | [job] control thread has finished
[2025-10-12 23:25:13] 2025-10-13 03:24:11,148 | INFO     | [job] validate thread has finished
[2025-10-12 23:25:13] 2025-10-13 03:24:11,338 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:25:13] 2025-10-13 03:24:11,511 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:25:13] 2025-10-13 03:24:11,538 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:25:13] 2025-10-13 03:24:11,634 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:25:13] 2025-10-13 03:24:11,964 | INFO     | [payload] control thread has finished
[2025-10-12 23:25:13] 2025-10-13 03:24:12,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:25:13] 2025-10-13 03:24:16,931 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:25:13] 2025-10-13 03:24:39,240 | INFO     | PID=16275 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 23:25:13] 2025-10-13 03:24:39,240 | INFO     | .. there are 3 such processes running
[2025-10-12 23:25:13] 2025-10-13 03:24:39,241 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:25:13] 2025-10-13 03:24:39,241 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:25:13] 2025-10-13 03:24:39,241 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:25:13] 2025-10-13 03:25:07,042 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:25:13] 2025-10-13 03:25:08,568 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139624924071744)>', '<ExcThread(monitor, started 139624336840448)>']
[2025-10-12 23:25:13] 2025-10-13 03:25:09,381 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:25:13] 2025-10-13 03:25:09,381 | INFO     | [monitor] control thread has ended
[2025-10-12 23:25:13] 2025-10-13 03:25:13,593 | INFO     | all workflow threads have been joined
[2025-10-12 23:25:13] 2025-10-13 03:25:13,593 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:25:13] 2025-10-13 03:25:13,594 | INFO     | traces error code: 0
[2025-10-12 23:25:13] 2025-10-13 03:25:13,594 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:25:13] 2025-10-13 03:25:13,677 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:25:13] 2025-10-13 03:25:13,679 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:25:13] 2025-10-13 03:25:13,681 [wrapper] pilotpid: 16275
[2025-10-12 23:25:13] 2025-10-13 03:25:13,683 [wrapper] Pilot exit status: 0
[2025-10-12 23:25:13] 2025-10-13 03:25:13,691 [wrapper] pandaids: 6840536038
[2025-10-12 23:25:13] 2025-10-13 03:25:13,718 [wrapper] cleanup supervisor_pilot  9067 16276
[2025-10-12 23:25:13] 2025-10-13 03:25:13,721 [wrapper] Test setup, not cleaning
[2025-10-12 23:25:13] 2025-10-13 03:25:13,723 [wrapper] apfmon messages muted
[2025-10-12 23:25:13] 2025-10-13 03:25:13,725 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:25:13] 2025-10-13 03:25:13,727 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:25:13]  *** Error codes and diagnostics ***
[2025-10-12 23:25:13]     "exeErrorCode": 0,
[2025-10-12 23:25:13]     "exeErrorDiag": "",
[2025-10-12 23:25:13]     "pilotErrorCode": 0,
[2025-10-12 23:25:13]     "pilotErrorDiag": "",
[2025-10-12 23:25:13]  *** Listing of results directory ***
[2025-10-12 23:25:13] total 418040
[2025-10-12 23:25:13] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 14:20 pilot3.tar.gz
[2025-10-12 23:25:13] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 14:22 queuedata.json
[2025-10-12 23:25:13] -rwx------ 1 boincer umatlas     36292 Oct 12 14:23 runpilot2-wrapper.sh
[2025-10-12 23:25:13] -rw-r--r-- 1 boincer umatlas       100 Oct 12 20:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:25:13] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 20:36 run_atlas
[2025-10-12 23:25:13] -rw-r--r-- 1 boincer umatlas       105 Oct 12 20:36 job.xml
[2025-10-12 23:25:13] -rw-r--r-- 2 boincer umatlas 222923434 Oct 12 20:36 EVNT.46676267._004403.pool.root.1
[2025-10-12 23:25:13] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:36 start_atlas.sh
[2025-10-12 23:25:13] drwxrwx--x 2 boincer umatlas      4096 Oct 12 20:36 shared
[2025-10-12 23:25:13] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 20:36 input.tar.gz
[2025-10-12 23:25:13] -rw-r--r-- 1 boincer umatlas         0 Oct 12 20:36 boinc_lockfile
[2025-10-12 23:25:13] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 20:36 pandaJob.out
[2025-10-12 23:25:13] -rw------- 1 boincer umatlas    975603 Oct 12 20:36 agis_schedconf.cvmfs.json
[2025-10-12 23:25:13] -rw------- 1 boincer umatlas   1560580 Oct 12 20:36 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:25:13] drwx------ 5 boincer umatlas      4096 Oct 12 20:36 pilot3
[2025-10-12 23:25:13] -rw-r--r-- 1 boincer umatlas      5949 Oct 12 23:19 init_data.xml
[2025-10-12 23:25:13] -rw------- 1 boincer umatlas 197592337 Oct 12 23:23 HITS.46676269._086093.pool.root.1
[2025-10-12 23:25:13] -rw-r--r-- 1 boincer umatlas       530 Oct 12 23:23 boinc_task_state.xml
[2025-10-12 23:25:13] -rw------- 1 boincer umatlas      1051 Oct 12 23:23 memory_monitor_summary.json
[2025-10-12 23:25:13] -rw------- 1 boincer umatlas    414930 Oct 12 23:24 log.46676269._086093.job.log.tgz.1
[2025-10-12 23:25:13] -rw------- 1 boincer umatlas      7854 Oct 12 23:24 heartbeat.json
[2025-10-12 23:25:13] -rw------- 1 boincer umatlas        95 Oct 12 23:24 pilot_heartbeat.json
[2025-10-12 23:25:13] -rw-r--r-- 1 boincer umatlas        28 Oct 12 23:24 wrapper_checkpoint.txt
[2025-10-12 23:25:13] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 23:24 boinc_mmap_file
[2025-10-12 23:25:13] -rw------- 1 boincer umatlas      5007 Oct 12 23:25 pilotlog.txt
[2025-10-12 23:25:13] -rw------- 1 boincer umatlas   1413504 Oct 12 23:25 log.46676269._086093.job.log.1
[2025-10-12 23:25:13] -rw------- 1 boincer umatlas       357 Oct 12 23:25 output.list
[2025-10-12 23:25:13] -rw-r--r-- 1 boincer umatlas       620 Oct 12 23:25 runtime_log
[2025-10-12 23:25:13] -rw------- 1 boincer umatlas   1843200 Oct 12 23:25 result.tar.gz
[2025-10-12 23:25:13] -rw-r--r-- 1 boincer umatlas      8699 Oct 12 23:25 runtime_log.err
[2025-10-12 23:25:13] -rw------- 1 boincer umatlas       660 Oct 12 23:25 mAVKDmEuFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmz2kNDmUp1NLn.diag
[2025-10-12 23:25:13] -rw-r--r-- 1 boincer umatlas     20921 Oct 12 23:25 stderr.txt
[2025-10-12 23:25:13] HITS file was successfully produced:
[2025-10-12 23:25:13] -rw------- 1 boincer umatlas 197592337 Oct 12 23:23 shared/HITS.pool.root.1
[2025-10-12 23:25:13]  *** Contents of shared directory: ***
[2025-10-12 23:25:13] total 413044
[2025-10-12 23:25:13] -rw-r--r-- 2 boincer umatlas 222923434 Oct 12 20:36 ATLAS.root_0
[2025-10-12 23:25:13] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:36 start_atlas.sh
[2025-10-12 23:25:13] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 20:36 input.tar.gz
[2025-10-12 23:25:13] -rw------- 1 boincer umatlas 197592337 Oct 12 23:23 HITS.pool.root.1
[2025-10-12 23:25:13] -rw------- 1 boincer umatlas   1843200 Oct 12 23:25 result.tar.gz
23:25:14 (12508): run_atlas exited; CPU time 76212.587248
23:25:14 (12508): called boinc_finish(0)

</stderr_txt>
]]>

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