Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:54:35 (3787864): wrapper (7.7.26015): starting
17:54:35 (3787864): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 17:54:35] Arguments: --nthreads 12
[2025-10-12 17:54:35] Threads: 12
[2025-10-12 17:54:35] Checking for CVMFS
[2025-10-12 17:54:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:54:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:54:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:54:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:54:37] 2.11.5.0 2048 31870 200280 151642 0 380 32051111 45568001 22656 130560 0 320389379 99.865 142077024 27300 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 17:54:37] CVMFS is ok
[2025-10-12 17:54:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:54:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:54:37] Further information can be found at the LHC@home message board.
[2025-10-12 17:54:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:54:37] Checking for apptainer binary...
[2025-10-12 17:54:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:54:37] Running /usr/bin/apptainer --version
[2025-10-12 17:54:37] apptainer version 1.4.1-1.el9
[2025-10-12 17:54:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:54:38] wns0076.triumf.lcg
[2025-10-12 17:54:38] apptainer works
[2025-10-12 17:54:38] Set ATHENA_PROC_NUMBER=12
[2025-10-12 17:54:38] Set ATHENA_CORE_NUMBER=12
[2025-10-12 17:54:38] Starting ATLAS job with PandaID=6840750067
[2025-10-12 17:54:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:01:39]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:01:39] 2025-10-13 01:00:40,900 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:01:39] 2025-10-13 01:00:40,900 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | WARNING  | wrong length of table data, x=[1760317063.0], y=[2431.0] (must be same and length>=4)
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | could have reported an average CPU frequency of 2647 MHz (4 samples)
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | ..............................
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . Timing measurements:
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . get job = 0 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . initial setup = 5 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . payload setup = 33 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . stage-in = 0 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . payload execution = 61 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . stage-out = 0 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . log creation = 0 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | ..............................
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 18:01:39] 2025-10-13 01:00:40,902 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840750067/pilotlog.txt
[2025-10-12 18:01:39] 2025-10-13 01:00:40,916 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 18:01:39] - Log from pilotlog.txt -
[2025-10-12 18:01:39] 2025-10-13 01:00:40,899 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840750067/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:01:39] 2025-10-13 01:00:40,900 | INFO     | extracted standard info from prmon json
[2025-10-12 18:01:39] 2025-10-13 01:00:40,900 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:01:39] 2025-10-13 01:00:40,900 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:01:39] 2025-10-13 01:00:40,900 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:01:39] 2025-10-13 01:00:40,900 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | WARNING  | wrong length of table data, x=[1760317063.0], y=[2431.0] (must be same and length>=4)
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | could have reported an average CPU frequency of 2647 MHz (4 samples)
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | ..............................
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . Timing measurements:
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . get job = 0 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . initial setup = 5 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . payload setup = 33 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . stage-in = 0 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . payload execution = 61 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . stage-out = 0 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . log creation = 0 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | ..............................
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 18:01:39] 2025-10-13 01:00:40,902 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840750067/pilotlog.txt
[2025-10-12 18:01:39] 2025-10-13 01:00:40,916 | WARNING  | 
[2025-10-12 18:01:39] [begin log extracts]
[2025-10-12 18:01:39] - Log from pilotlog.txt -
[2025-10-12 18:01:39] 2025-10-13 01:00:40,899 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6840750067/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:01:39] 2025-10-13 01:00:40,900 | INFO     | extracted standard info from prmon json
[2025-10-12 18:01:39] 2025-10-13 01:00:40,900 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:01:39] 2025-10-13 01:00:40,900 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:01:39] 2025-10-13 01:00:40,900 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:01:39] 2025-10-13 01:00:40,900 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | WARNING  | wrong length of table data, x=[1760317063.0], y=[2431.0] (must be same and length>=4)
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | could have reported an average CPU frequency of 2647 MHz (4 samples)
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | ..............................
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . Timing measurements:
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . get job = 0 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . initial setup = 5 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . payload setup = 33 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . stage-in = 0 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . payload execution = 61 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . stage-out = 0 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | . log creation = 0 s
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | ..............................
[2025-10-12 18:01:39] 2025-10-13 01:00:40,901 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 18:01:39] 2025-10-13 01:00:40,902 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840750067/pilotlog.txt
[2025-10-12 18:01:39] [end log extracts]
[2025-10-12 18:01:39] 2025-10-13 01:00:40,916 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 18:01:39] 2025-10-13 01:00:40,917 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 18:01:39] 2025-10-13 01:00:41,017 | INFO     | time since job start (308s) is within the limit (172800.0s)
[2025-10-12 18:01:39] 2025-10-13 01:00:41,703 | INFO     | 
[2025-10-12 18:01:39] 2025-10-13 01:00:41,703 | INFO     | job summary report
[2025-10-12 18:01:39] 2025-10-13 01:00:41,703 | INFO     | --------------------------------------------------
[2025-10-12 18:01:39] 2025-10-13 01:00:41,703 | INFO     | PanDA job id: 6840750067
[2025-10-12 18:01:39] 2025-10-13 01:00:41,703 | INFO     | task id: 46676269
[2025-10-12 18:01:39] 2025-10-13 01:00:41,703 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 17:58:03,169 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 18:01:39] 2025-10-13 01:00:41,703 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:01:39] 2025-10-13 01:00:41,703 | INFO     | pilot state: failed 
[2025-10-12 18:01:39] 2025-10-13 01:00:41,703 | INFO     | transexitcode: 65
[2025-10-12 18:01:39] 2025-10-13 01:00:41,703 | INFO     | exeerrorcode: 65
[2025-10-12 18:01:39] 2025-10-13 01:00:41,703 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 18:01:39] 2025-10-13 01:00:41,703 | INFO     | exitcode: 65
[2025-10-12 18:01:39] 2025-10-13 01:00:41,703 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 18:01:39] 2025-10-13 01:00:41,704 | INFO     | cpuconsumptiontime: 19 s
[2025-10-12 18:01:39] 2025-10-13 01:00:41,704 | INFO     | nevents: 0
[2025-10-12 18:01:39] 2025-10-13 01:00:41,704 | INFO     | neventsw: 0
[2025-10-12 18:01:39] 2025-10-13 01:00:41,704 | INFO     | pid: 3798709
[2025-10-12 18:01:39] 2025-10-13 01:00:41,704 | INFO     | pgrp: 3798709
[2025-10-12 18:01:39] 2025-10-13 01:00:41,704 | INFO     | corecount: 12
[2025-10-12 18:01:39] 2025-10-13 01:00:41,704 | INFO     | event service: False
[2025-10-12 18:01:39] 2025-10-13 01:00:41,704 | INFO     | sizes: {0: 2348023, 1: 2348705, 2: 2348705, 3: 2348904, 4: 2348932, 5: 2348960, 16: 2349144, 27: 2349172, 33: 2349462, 38: 2349518, 100: 2372889, 101: 2373145, 103
[2025-10-12 18:01:39] 2025-10-13 01:00:41,704 | INFO     | --------------------------------------------------
[2025-10-12 18:01:39] 2025-10-13 01:00:41,704 | INFO     | 
[2025-10-12 18:01:39] 2025-10-13 01:00:41,704 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 18:01:39] 2025-10-13 01:00:41,770 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:01:39] 2025-10-13 01:00:41,770 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:01:39] 2025-10-13 01:00:41,770 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:01:39] 2025-10-13 01:00:41,770 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:01:39] 2025-10-13 01:00:41,770 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:01:39] 2025-10-13 01:00:41,770 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:01:39] 2025-10-13 01:00:41,770 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:01:39] 2025-10-13 01:00:41,770 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:01:39] 2025-10-13 01:00:41,770 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:01:39] 2025-10-13 01:00:41,770 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:01:39] 2025-10-13 01:00:41,771 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:01:39] 2025-10-13 01:00:41,771 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:01:39] 2025-10-13 01:00:41,771 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:01:39] 2025-10-13 01:00:41,771 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:01:39] 2025-10-13 01:00:41,771 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:01:39] 2025-10-13 01:00:41,771 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:01:39] 2025-10-13 01:00:41,771 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:01:39] 2025-10-13 01:00:41,771 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:01:39] 2025-10-13 01:00:41,771 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:01:39] 2025-10-13 01:00:41,771 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:01:39] 2025-10-13 01:00:41,771 | INFO     | job 6840750067 has completed (purged errors)
[2025-10-12 18:01:39] 2025-10-13 01:00:41,771 | INFO     | overall cleanup function is called
[2025-10-12 18:01:39] 2025-10-13 01:00:42,777 | INFO     | --- collectZombieJob: --- 10, [3798709]
[2025-10-12 18:01:39] 2025-10-13 01:00:42,778 | INFO     | zombie collector waiting for pid 3798709
[2025-10-12 18:01:39] 2025-10-13 01:00:42,778 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:01:39] 2025-10-13 01:00:42,778 | INFO     | collected zombie processes
[2025-10-12 18:01:39] 2025-10-13 01:00:42,778 | INFO     | will attempt to kill all subprocesses of pid=3798709
[2025-10-12 18:01:39] 2025-10-13 01:00:44,087 | INFO     | process IDs to be killed: [3798709] (in reverse order)
[2025-10-12 18:01:39] 2025-10-13 01:00:44,670 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:01:39] 2025-10-13 01:00:44,670 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:01:39] 2025-10-13 01:00:44,767 | INFO     | did not find any defunct processes belonging to 3798709
[2025-10-12 18:01:39] 2025-10-13 01:00:44,857 | INFO     | did not find any defunct processes belonging to 3798709
[2025-10-12 18:01:39] 2025-10-13 01:00:44,857 | INFO     | ready for new job
[2025-10-12 18:01:39] 2025-10-13 01:00:44,858 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:01:39] 2025-10-13 01:00:44,881 | INFO     | ***************************************
[2025-10-12 18:01:39] 2025-10-13 01:00:44,881 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:01:39] 2025-10-13 01:00:44,881 | INFO     | ***************************************
[2025-10-12 18:01:39] 2025-10-13 01:00:44,881 | INFO     | 
[2025-10-12 18:01:39] 2025-10-13 01:00:44,883 | INFO     | architecture information:
[2025-10-12 18:01:39] 2025-10-13 01:00:44,905 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:01:39] 2025-10-13 01:00:45,023 | INFO     | cat /etc/os-release:
[2025-10-12 18:01:39] NAME="CentOS Linux"
[2025-10-12 18:01:39] VERSION="7 (Core)"
[2025-10-12 18:01:39] ID="centos"
[2025-10-12 18:01:39] ID_LIKE="rhel fedora"
[2025-10-12 18:01:39] VERSION_ID="7"
[2025-10-12 18:01:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:01:39] ANSI_COLOR="0;31"
[2025-10-12 18:01:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:01:39] HOME_URL="https://www.centos.org/"
[2025-10-12 18:01:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:01:39] 
[2025-10-12 18:01:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:01:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:01:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:01:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:01:39] 
[2025-10-12 18:01:39] 2025-10-13 01:00:45,023 | INFO     | ***************************************
[2025-10-12 18:01:39] 2025-10-13 01:00:45,527 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 18:01:39] 2025-10-13 01:00:45,679 | INFO     | sufficient remaining disk space (1951717654528 B)
[2025-10-12 18:01:39] 2025-10-13 01:00:45,679 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:01:39] 2025-10-13 01:00:45,679 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:01:39] 2025-10-13 01:00:45,679 | INFO     | update_server=False
[2025-10-12 18:01:39] 2025-10-13 01:00:45,679 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:01:39] 2025-10-13 01:00:45,680 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:01:39] 2025-10-13 01:00:45,680 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:01:39] 2025-10-13 01:00:45,680 | INFO     | aborting loop
[2025-10-12 18:01:39] 2025-10-13 01:00:45,731 | INFO     | all payload control threads have been joined
[2025-10-12 18:01:39] 2025-10-13 01:00:46,339 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:01:39] 2025-10-13 01:00:46,533 | INFO     | all job control threads have been joined
[2025-10-12 18:01:39] 2025-10-13 01:00:46,642 | INFO     | all data control threads have been joined
[2025-10-12 18:01:39] 2025-10-13 01:00:46,686 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:01:39] 2025-10-13 01:00:46,686 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:01:39] 2025-10-13 01:00:46,723 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:01:39] 2025-10-13 01:00:46,738 | INFO     | [payload] control thread has finished
[2025-10-12 18:01:39] 2025-10-13 01:00:47,026 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:01:39] 2025-10-13 01:00:47,346 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:01:39] 2025-10-13 01:00:47,415 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:01:39] 2025-10-13 01:00:47,506 | INFO     | [job] validate thread has finished
[2025-10-12 18:01:39] 2025-10-13 01:00:47,540 | INFO     | [job] control thread has finished
[2025-10-12 18:01:39] 2025-10-13 01:00:47,554 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:01:39] 2025-10-13 01:00:47,648 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:01:39] 2025-10-13 01:00:47,648 | INFO     | [data] control thread has finished
[2025-10-12 18:01:39] 2025-10-13 01:00:47,687 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:01:39] 2025-10-13 01:00:47,823 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:01:39] 2025-10-13 01:00:47,928 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:01:39] 2025-10-13 01:00:48,059 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:01:39] 2025-10-13 01:00:51,937 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:01:39] 2025-10-13 01:01:15,233 | INFO     | PID=3791714 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 18:01:39] 2025-10-13 01:01:15,233 | INFO     | .. there are 42 such processes running
[2025-10-12 18:01:39] 2025-10-13 01:01:15,233 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:01:39] 2025-10-13 01:01:15,234 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:01:39] 2025-10-13 01:01:15,234 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:01:39] 2025-10-13 01:01:32,392 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:01:39] 2025-10-13 01:01:33,256 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139996102158144)>', '<ExcThread(monitor, started 139995683723008)>']
[2025-10-12 18:01:39] 2025-10-13 01:01:33,340 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:01:39] 2025-10-13 01:01:33,341 | INFO     | [monitor] control thread has ended
[2025-10-12 18:01:39] 2025-10-13 01:01:38,281 | INFO     | all workflow threads have been joined
[2025-10-12 18:01:39] 2025-10-13 01:01:38,282 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:01:39] 2025-10-13 01:01:38,282 | INFO     | traces error code: 0
[2025-10-12 18:01:39] 2025-10-13 01:01:38,282 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:01:39] 2025-10-13 01:01:38,675 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:01:39] 2025-10-13 01:01:38,706 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:01:39] 2025-10-13 01:01:38,739 [wrapper] pilotpid: 3791714
[2025-10-12 18:01:39] 2025-10-13 01:01:38,760 [wrapper] Pilot exit status: 0
[2025-10-12 18:01:39] 2025-10-13 01:01:38,842 [wrapper] pandaids: 6840750067
[2025-10-12 18:01:39] 2025-10-13 01:01:38,992 [wrapper] cleanup supervisor_pilot 3791720 3791715
[2025-10-12 18:01:39] 2025-10-13 01:01:38,998 [wrapper] Test setup, not cleaning
[2025-10-12 18:01:39] 2025-10-13 01:01:39,005 [wrapper] apfmon messages muted
[2025-10-12 18:01:39] 2025-10-13 01:01:39,008 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:01:39] 2025-10-13 01:01:39,010 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:01:39]  *** Error codes and diagnostics ***
[2025-10-12 18:01:39]     "exeErrorCode": 65,
[2025-10-12 18:01:39]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 18:01:39]     "pilotErrorCode": 1305,
[2025-10-12 18:01:39]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 18:01:39]  *** Listing of results directory ***
[2025-10-12 18:01:39] total 221492
[2025-10-12 18:01:39] -rw-r--r--. 1 boinc boinc    557409 Oct 12 13:55 pilot3.tar.gz
[2025-10-12 18:01:39] -rw-r--r--. 1 boinc boinc      5112 Oct 12 14:03 queuedata.json
[2025-10-12 18:01:39] -rwx------. 1 boinc boinc     36292 Oct 12 14:04 runpilot2-wrapper.sh
[2025-10-12 18:01:39] -rw-r--r--. 1 boinc boinc       100 Oct 12 17:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:01:39] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 17:54 run_atlas
[2025-10-12 18:01:39] -rw-r--r--. 1 boinc boinc       105 Oct 12 17:54 job.xml
[2025-10-12 18:01:39] -rw-r--r--. 1 boinc boinc      6593 Oct 12 17:54 init_data.xml
[2025-10-12 18:01:39] -rw-r--r--. 2 boinc boinc 222671993 Oct 12 17:54 EVNT.46676267._004768.pool.root.1
[2025-10-12 18:01:39] -rw-r--r--. 2 boinc boinc     15120 Oct 12 17:54 start_atlas.sh
[2025-10-12 18:01:39] drwxrwx--x. 2 boinc boinc      4096 Oct 12 17:54 shared
[2025-10-12 18:01:39] -rw-r--r--. 2 boinc boinc    569680 Oct 12 17:54 input.tar.gz
[2025-10-12 18:01:39] -rw-r--r--. 1 boinc boinc         0 Oct 12 17:54 boinc_lockfile
[2025-10-12 18:01:39] -rw-r--r--. 1 boinc boinc      2547 Oct 12 17:54 pandaJob.out
[2025-10-12 18:01:39] -rw-------. 1 boinc boinc    975603 Oct 12 17:55 agis_schedconf.cvmfs.json
[2025-10-12 18:01:39] -rw-------. 1 boinc boinc   1560580 Oct 12 17:55 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:01:39] drwx------. 5 boinc boinc      4096 Oct 12 17:55 pilot3
[2025-10-12 18:01:39] -rw-------. 1 boinc boinc       956 Oct 12 17:58 memory_monitor_summary.json
[2025-10-12 18:01:39] -rw-------. 1 boinc boinc     22464 Oct 12 17:58 log.46676269._089446.job.log.tgz.1
[2025-10-12 18:01:39] -rw-------. 1 boinc boinc        95 Oct 12 18:00 pilot_heartbeat.json
[2025-10-12 18:01:39] -rw-------. 1 boinc boinc      8387 Oct 12 18:00 heartbeat.json
[2025-10-12 18:01:39] -rw-r--r--. 1 boinc boinc       525 Oct 12 18:01 boinc_task_state.xml
[2025-10-12 18:01:39] -rw-r--r--. 1 boinc boinc      8192 Oct 12 18:01 boinc_mmap_file
[2025-10-12 18:01:39] -rw-r--r--. 1 boinc boinc        23 Oct 12 18:01 wrapper_checkpoint.txt
[2025-10-12 18:01:39] -rw-------. 1 boinc boinc      4823 Oct 12 18:01 pilotlog.txt
[2025-10-12 18:01:39] -rw-------. 1 boinc boinc     97473 Oct 12 18:01 log.46676269._089446.job.log.1
[2025-10-12 18:01:39] -rw-------. 1 boinc boinc       188 Oct 12 18:01 output.list
[2025-10-12 18:01:39] -rw-r--r--. 1 boinc boinc       620 Oct 12 18:01 runtime_log
[2025-10-12 18:01:39] -rw-------. 1 boinc boinc    143360 Oct 12 18:01 result.tar.gz
[2025-10-12 18:01:39] -rw-r--r--. 1 boinc boinc      8528 Oct 12 18:01 runtime_log.err
[2025-10-12 18:01:39] -rw-------. 1 boinc boinc       645 Oct 12 18:01 ajmNDmpPIS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm82UMDmfdtGWo.diag
[2025-10-12 18:01:39] -rw-r--r--. 1 boinc boinc      8229 Oct 12 18:01 stderr.txt
[2025-10-12 18:01:39] No HITS result produced
[2025-10-12 18:01:39]  *** Contents of shared directory: ***
[2025-10-12 18:01:39] total 218176
[2025-10-12 18:01:39] -rw-r--r--. 2 boinc boinc 222671993 Oct 12 17:54 ATLAS.root_0
[2025-10-12 18:01:39] -rw-r--r--. 2 boinc boinc     15120 Oct 12 17:54 start_atlas.sh
[2025-10-12 18:01:39] -rw-r--r--. 2 boinc boinc    569680 Oct 12 17:54 input.tar.gz
[2025-10-12 18:01:39] -rw-------. 1 boinc boinc    143360 Oct 12 18:01 result.tar.gz
18:01:41 (3787864): run_atlas exited; CPU time 33.833389
18:01:41 (3787864): called boinc_finish(0)

</stderr_txt>
]]>

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