Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:12 (3026271): wrapper (7.7.26015): starting
00:00:12 (3026271): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:00:12] Arguments: --nthreads 12
[2025-10-13 00:00:12] Threads: 12
[2025-10-13 00:00:12] Checking for CVMFS
[2025-10-13 00:00:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:00:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:00:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:00:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:00:16] 2.13.2.0 3526814 61361 366124 151647 0 162 32809328 32935648 34346 16776704 0 103916582 99.558 108537228 8111 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:00:16] CVMFS is ok
[2025-10-13 00:00:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:00:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:00:17] Further information can be found at the LHC@home message board.
[2025-10-13 00:00:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:00:17] Checking for apptainer binary...
[2025-10-13 00:00:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:00:17] Running /usr/bin/apptainer --version
[2025-10-13 00:00:17] apptainer version 1.4.3-1.el9
[2025-10-13 00:00:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:00:19] c6-12-25-2.aglt2.org
[2025-10-13 00:00:19] apptainer works
[2025-10-13 00:00:19] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:00:19] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:00:19] Starting ATLAS job with PandaID=6840749203
[2025-10-13 00:00:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:59:18]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:59:18] 2025-10-13 16:58:11,105 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 12:59:18] 2025-10-13 16:58:11,105 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 12:59:18] 2025-10-13 16:58:11,140 | INFO     | fitting pss+swap vs Time
[2025-10-13 12:59:18] 2025-10-13 16:58:11,143 | INFO     | sum of square deviations: 135580248801.92361
[2025-10-13 12:59:18] 2025-10-13 16:58:11,176 | INFO     | sum of deviations: 809633851715.9269
[2025-10-13 12:59:18] 2025-10-13 16:58:11,177 | INFO     | mean x: 1760351498.4123847
[2025-10-13 12:59:18] 2025-10-13 16:58:11,177 | INFO     | mean y: 2337305.1567852437
[2025-10-13 12:59:18] 2025-10-13 16:58:11,178 | INFO     | -- intersect: -10509814550.499796
[2025-10-13 12:59:18] 2025-10-13 16:58:11,178 | INFO     | intersect: -10509814550.499796
[2025-10-13 12:59:18] 2025-10-13 16:58:11,181 | INFO     | chi2: 8.674430537942982
[2025-10-13 12:59:18] 2025-10-13 16:58:11,183 | INFO     | sum of square deviations: 132918878464.98799
[2025-10-13 12:59:18] 2025-10-13 16:58:11,217 | INFO     | sum of deviations: 900839019675.3083
[2025-10-13 12:59:18] 2025-10-13 16:58:11,217 | INFO     | mean x: 1760351345.9270556
[2025-10-13 12:59:18] 2025-10-13 16:58:11,218 | INFO     | mean y: 2342510.769230769
[2025-10-13 12:59:18] 2025-10-13 16:58:11,218 | INFO     | -- intersect: -11928191353.664108
[2025-10-13 12:59:18] 2025-10-13 16:58:11,218 | INFO     | intersect: -11928191353.664108
[2025-10-13 12:59:18] 2025-10-13 16:58:11,221 | INFO     | chi2: 7.279892274414246
[2025-10-13 12:59:18] 2025-10-13 16:58:11,221 | INFO     | current chi2=7.279892274414246 (change=16.07642435349342 %)
[2025-10-13 12:59:18] 2025-10-13 16:58:11,221 | INFO     | right removable region: 753
[2025-10-13 12:59:18] 2025-10-13 16:58:11,224 | INFO     | sum of square deviations: 132917900211.84103
[2025-10-13 12:59:18] 2025-10-13 16:58:11,257 | INFO     | sum of deviations: 586656103214.4933
[2025-10-13 12:59:18] 2025-10-13 16:58:11,258 | INFO     | mean x: 1760351650.9257295
[2025-10-13 12:59:18] 2025-10-13 16:58:11,258 | INFO     | mean y: 2350072.330238727
[2025-10-13 12:59:18] 2025-10-13 16:58:11,258 | INFO     | -- intersect: -7767265894.919958
[2025-10-13 12:59:18] 2025-10-13 16:58:11,258 | INFO     | intersect: -7767265894.919958
[2025-10-13 12:59:18] 2025-10-13 16:58:11,261 | INFO     | chi2: 5.127142385133697
[2025-10-13 12:59:18] 2025-10-13 16:58:11,261 | INFO     | current chi2=5.127142385133697 (change=40.893614137470216 %)
[2025-10-13 12:59:18] 2025-10-13 16:58:11,264 | INFO     | sum of square deviations: 130290668288.36304
[2025-10-13 12:59:18] 2025-10-13 16:58:11,297 | INFO     | sum of deviations: 438373045204.77386
[2025-10-13 12:59:18] 2025-10-13 16:58:11,297 | INFO     | mean x: 1760351803.4379172
[2025-10-13 12:59:18] 2025-10-13 16:58:11,298 | INFO     | mean y: 2358674.5220293724
[2025-10-13 12:59:18] 2025-10-13 16:58:11,298 | INFO     | -- intersect: -5920481317.340375
[2025-10-13 12:59:18] 2025-10-13 16:58:11,298 | INFO     | intersect: -5920481317.340375
[2025-10-13 12:59:18] 2025-10-13 16:58:11,301 | INFO     | chi2: 3.6097298726625806
[2025-10-13 12:59:18] 2025-10-13 16:58:11,301 | INFO     | current chi2=3.6097298726625806 (change=29.595677250370482 %)
[2025-10-13 12:59:18] 2025-10-13 16:58:11,304 | INFO     | sum of square deviations: 127698503043.62915
[2025-10-13 12:59:18] 2025-10-13 16:58:11,336 | INFO     | sum of deviations: 330297002130.76666
[2025-10-13 12:59:18] 2025-10-13 16:58:11,337 | INFO     | mean x: 1760351955.9435484
[2025-10-13 12:59:18] 2025-10-13 16:58:11,337 | INFO     | mean y: 2365033.065860215
[2025-10-13 12:59:18] 2025-10-13 16:58:11,337 | INFO     | -- intersect: -4550851800.999395
[2025-10-13 12:59:18] 2025-10-13 16:58:11,338 | INFO     | intersect: -4550851800.999395
[2025-10-13 12:59:18] 2025-10-13 16:58:11,340 | INFO     | chi2: 2.855364085907819
[2025-10-13 12:59:18] 2025-10-13 16:58:11,341 | INFO     | current chi2=2.855364085907819 (change=20.89812294453857 %)
[2025-10-13 12:59:18] 2025-10-13 16:58:11,341 | INFO     | left removable region: 30
[2025-10-13 12:59:18] 2025-10-13 16:58:11,343 | INFO     | sum of square deviations: 117187471702.32619
[2025-10-13 12:59:18] 2025-10-13 16:58:11,373 | INFO     | sum of deviations: 207705849441.91696
[2025-10-13 12:59:18] 2025-10-13 16:58:11,374 | INFO     | mean x: 1760352230.4757953
[2025-10-13 12:59:18] 2025-10-13 16:58:11,374 | INFO     | mean y: 2383888.7095435685
[2025-10-13 12:59:18] 2025-10-13 16:58:11,375 | INFO     | -- intersect: -3117706083.6786084
[2025-10-13 12:59:18] 2025-10-13 16:58:11,375 | INFO     | intersect: -3117706083.6786084
[2025-10-13 12:59:18] 2025-10-13 16:58:11,377 | INFO     | chi2: 0.3670165060478743
[2025-10-13 12:59:18] 2025-10-13 16:58:11,378 | INFO     | -- intersect: -3117706083.6786084
[2025-10-13 12:59:18] 2025-10-13 16:58:11,378 | INFO     | current memory leak: 1.77 B/s (using 723 data points, chi2=0.37)
[2025-10-13 12:59:18] 2025-10-13 16:58:11,380 | INFO     | could have reported an average CPU frequency of 999 MHz (28 samples)
[2025-10-13 12:59:18] 2025-10-13 16:58:11,381 | INFO     | ..............................
[2025-10-13 12:59:18] 2025-10-13 16:58:11,381 | INFO     | . Timing measurements:
[2025-10-13 12:59:18] 2025-10-13 16:58:11,381 | INFO     | . get job = 1 s
[2025-10-13 12:59:18] 2025-10-13 16:58:11,381 | INFO     | . initial setup = 11 s
[2025-10-13 12:59:18] 2025-10-13 16:58:11,382 | INFO     | . payload setup = 69 s
[2025-10-13 12:59:18] 2025-10-13 16:58:11,382 | INFO     | . stage-in = 1 s
[2025-10-13 12:59:18] 2025-10-13 16:58:11,382 | INFO     | . payload execution = 46302 s
[2025-10-13 12:59:18] 2025-10-13 16:58:11,382 | INFO     | . stage-out = 8 s
[2025-10-13 12:59:18] 2025-10-13 16:58:11,382 | INFO     | . log creation = 1 s
[2025-10-13 12:59:18] 2025-10-13 16:58:11,383 | INFO     | ..............................
[2025-10-13 12:59:18] 2025-10-13 16:58:11,416 | INFO     | time since job start (46543s) is within the limit (172800.0s)
[2025-10-13 12:59:18] 2025-10-13 16:58:11,698 | INFO     | 
[2025-10-13 12:59:18] 2025-10-13 16:58:11,699 | INFO     | job summary report
[2025-10-13 12:59:18] 2025-10-13 16:58:11,699 | INFO     | --------------------------------------------------
[2025-10-13 12:59:18] 2025-10-13 16:58:11,699 | INFO     | PanDA job id: 6840749203
[2025-10-13 12:59:18] 2025-10-13 16:58:11,699 | INFO     | task id: 46676269
[2025-10-13 12:59:18] 2025-10-13 16:58:11,699 | INFO     | errors: (none)
[2025-10-13 12:59:18] 2025-10-13 16:58:11,700 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 12:59:18] 2025-10-13 16:58:11,700 | INFO     | pilot state: finished 
[2025-10-13 12:59:18] 2025-10-13 16:58:11,700 | INFO     | transexitcode: 0
[2025-10-13 12:59:18] 2025-10-13 16:58:11,700 | INFO     | exeerrorcode: 0
[2025-10-13 12:59:18] 2025-10-13 16:58:11,700 | INFO     | exeerrordiag: 
[2025-10-13 12:59:18] 2025-10-13 16:58:11,701 | INFO     | exitcode: 0
[2025-10-13 12:59:18] 2025-10-13 16:58:11,701 | INFO     | exitmsg: OK
[2025-10-13 12:59:18] 2025-10-13 16:58:11,701 | INFO     | cpuconsumptiontime: 116825 s
[2025-10-13 12:59:18] 2025-10-13 16:58:11,701 | INFO     | nevents: 400
[2025-10-13 12:59:18] 2025-10-13 16:58:11,701 | INFO     | neventsw: 0
[2025-10-13 12:59:18] 2025-10-13 16:58:11,702 | INFO     | pid: 3070620
[2025-10-13 12:59:18] 2025-10-13 16:58:11,702 | INFO     | pgrp: 3070620
[2025-10-13 12:59:18] 2025-10-13 16:58:11,702 | INFO     | corecount: 12
[2025-10-13 12:59:18] 2025-10-13 16:58:11,702 | INFO     | event service: False
[2025-10-13 12:59:18] 2025-10-13 16:58:11,702 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348913, 4: 2348913, 5: 2348941, 17: 2348997, 28: 2349153, 39: 2349181, 51: 2349209, 55: 2349499, 62: 2349527, 46377: 2391932, 4
[2025-10-13 12:59:18] 2025-10-13 16:58:11,703 | INFO     | --------------------------------------------------
[2025-10-13 12:59:18] 2025-10-13 16:58:11,703 | INFO     | 
[2025-10-13 12:59:18] 2025-10-13 16:58:11,703 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-13 12:59:18] 2025-10-13 16:58:11,820 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 12:59:18] 2025-10-13 16:58:11,821 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 12:59:18] 2025-10-13 16:58:11,821 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 12:59:18] 2025-10-13 16:58:11,821 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 12:59:18] 2025-10-13 16:58:11,822 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 12:59:18] 2025-10-13 16:58:11,822 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 12:59:18] 2025-10-13 16:58:11,822 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 12:59:18] 2025-10-13 16:58:11,822 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 12:59:18] 2025-10-13 16:58:11,823 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 12:59:18] 2025-10-13 16:58:11,823 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 12:59:18] 2025-10-13 16:58:11,823 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 12:59:18] 2025-10-13 16:58:11,823 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 12:59:18] 2025-10-13 16:58:11,823 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 12:59:18] 2025-10-13 16:58:11,824 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 12:59:18] 2025-10-13 16:58:11,824 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 12:59:18] 2025-10-13 16:58:11,824 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 12:59:18] 2025-10-13 16:58:11,824 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 12:59:18] 2025-10-13 16:58:11,825 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 12:59:18] 2025-10-13 16:58:11,825 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 12:59:18] 2025-10-13 16:58:11,825 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 12:59:18] 2025-10-13 16:58:11,826 | INFO     | job 6840749203 has completed (purged errors)
[2025-10-13 12:59:18] 2025-10-13 16:58:11,826 | INFO     | overall cleanup function is called
[2025-10-13 12:59:18] 2025-10-13 16:58:12,840 | INFO     | --- collectZombieJob: --- 10, [3070620]
[2025-10-13 12:59:18] 2025-10-13 16:58:12,841 | INFO     | zombie collector waiting for pid 3070620
[2025-10-13 12:59:18] 2025-10-13 16:58:12,841 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 12:59:18] 2025-10-13 16:58:12,841 | INFO     | collected zombie processes
[2025-10-13 12:59:18] 2025-10-13 16:58:12,842 | INFO     | will attempt to kill all subprocesses of pid=3070620
[2025-10-13 12:59:18] 2025-10-13 16:58:15,199 | INFO     | process IDs to be killed: [3070620] (in reverse order)
[2025-10-13 12:59:18] 2025-10-13 16:58:15,887 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 12:59:18] 2025-10-13 16:58:15,888 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 12:59:18] 2025-10-13 16:58:16,009 | INFO     | did not find any defunct processes belonging to 3070620
[2025-10-13 12:59:18] 2025-10-13 16:58:16,124 | INFO     | did not find any defunct processes belonging to 3070620
[2025-10-13 12:59:18] 2025-10-13 16:58:16,125 | INFO     | ready for new job
[2025-10-13 12:59:18] 2025-10-13 16:58:16,126 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 12:59:18] 2025-10-13 16:58:16,132 | INFO     | ***************************************
[2025-10-13 12:59:18] 2025-10-13 16:58:16,132 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 12:59:18] 2025-10-13 16:58:16,133 | INFO     | ***************************************
[2025-10-13 12:59:18] 2025-10-13 16:58:16,133 | INFO     | 
[2025-10-13 12:59:18] 2025-10-13 16:58:16,180 | INFO     | architecture information:
[2025-10-13 12:59:18] 2025-10-13 16:58:16,192 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:59:18] 2025-10-13 16:58:16,343 | INFO     | cat /etc/os-release:
[2025-10-13 12:59:18] NAME="CentOS Linux"
[2025-10-13 12:59:18] VERSION="7 (Core)"
[2025-10-13 12:59:18] ID="centos"
[2025-10-13 12:59:18] ID_LIKE="rhel fedora"
[2025-10-13 12:59:18] VERSION_ID="7"
[2025-10-13 12:59:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:59:18] ANSI_COLOR="0;31"
[2025-10-13 12:59:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:59:18] HOME_URL="https://www.centos.org/"
[2025-10-13 12:59:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:59:18] 
[2025-10-13 12:59:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:59:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:59:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:59:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:59:18] 
[2025-10-13 12:59:18] 2025-10-13 16:58:16,343 | INFO     | ***************************************
[2025-10-13 12:59:18] 2025-10-13 16:58:16,848 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-13 12:59:18] 2025-10-13 16:58:17,087 | INFO     | sufficient remaining disk space (95473893376 B)
[2025-10-13 12:59:18] 2025-10-13 16:58:17,088 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:59:18] 2025-10-13 16:58:17,089 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:59:18] 2025-10-13 16:58:17,089 | INFO     | update_server=False
[2025-10-13 12:59:18] 2025-10-13 16:58:17,090 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:59:18] 2025-10-13 16:58:17,112 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:59:18] 2025-10-13 16:58:17,113 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:59:18] 2025-10-13 16:58:17,138 | INFO     | all data control threads have been joined
[2025-10-13 12:59:18] 2025-10-13 16:58:17,188 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:59:18] 2025-10-13 16:58:17,341 | INFO     | all payload control threads have been joined
[2025-10-13 12:59:18] 2025-10-13 16:58:17,606 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:59:18] 2025-10-13 16:58:17,607 | INFO     | aborting loop
[2025-10-13 12:59:18] 2025-10-13 16:58:18,116 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:59:18] 2025-10-13 16:58:18,120 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:59:18] 2025-10-13 16:58:18,145 | INFO     | [data] control thread has finished
[2025-10-13 12:59:18] 2025-10-13 16:58:18,348 | INFO     | [payload] control thread has finished
[2025-10-13 12:59:18] 2025-10-13 16:58:18,552 | INFO     | all job control threads have been joined
[2025-10-13 12:59:18] 2025-10-13 16:58:18,614 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:59:18] 2025-10-13 16:58:18,628 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:59:18] 2025-10-13 16:58:18,744 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:59:18] 2025-10-13 16:58:18,969 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:59:18] 2025-10-13 16:58:19,026 | INFO     | [job] validate thread has finished
[2025-10-13 12:59:18] 2025-10-13 16:58:19,033 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:59:18] 2025-10-13 16:58:19,116 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:59:18] 2025-10-13 16:58:19,155 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:59:18] 2025-10-13 16:58:19,196 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:59:18] 2025-10-13 16:58:19,415 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:59:18] 2025-10-13 16:58:19,558 | INFO     | [job] control thread has finished
[2025-10-13 12:59:18] 2025-10-13 16:58:21,122 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:59:18] 2025-10-13 16:58:46,533 | INFO     | PID=3043577 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 12:59:18] 2025-10-13 16:58:46,534 | INFO     | .. there are 33 such processes running
[2025-10-13 12:59:18] 2025-10-13 16:58:46,535 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:59:18] 2025-10-13 16:58:46,536 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:59:18] 2025-10-13 16:58:46,536 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:59:18] 2025-10-13 16:59:10,257 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:59:18] 2025-10-13 16:59:10,291 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140196027709248)>', '<ExcThread(monitor, started 140195223553792)>']
[2025-10-13 12:59:18] 2025-10-13 16:59:10,690 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:59:18] 2025-10-13 16:59:10,691 | INFO     | [monitor] control thread has ended
[2025-10-13 12:59:18] 2025-10-13 16:59:15,318 | INFO     | all workflow threads have been joined
[2025-10-13 12:59:18] 2025-10-13 16:59:15,319 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:59:18] 2025-10-13 16:59:15,320 | INFO     | traces error code: 0
[2025-10-13 12:59:18] 2025-10-13 16:59:15,321 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:59:18] 2025-10-13 16:59:16,623 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:59:18] 2025-10-13 16:59:16,632 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:59:18] 2025-10-13 16:59:16,641 [wrapper] pilotpid: 3043577
[2025-10-13 12:59:18] 2025-10-13 16:59:16,649 [wrapper] Pilot exit status: 0
[2025-10-13 12:59:18] 2025-10-13 16:59:16,724 [wrapper] pandaids: 6840749203
[2025-10-13 12:59:18] 2025-10-13 16:59:17,044 [wrapper] cleanup supervisor_pilot  788051 3043578
[2025-10-13 12:59:18] 2025-10-13 16:59:17,061 [wrapper] Test setup, not cleaning
[2025-10-13 12:59:18] 2025-10-13 16:59:17,096 [wrapper] apfmon messages muted
[2025-10-13 12:59:18] 2025-10-13 16:59:17,104 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:59:18] 2025-10-13 16:59:17,111 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:59:18]  *** Error codes and diagnostics ***
[2025-10-13 12:59:18]     "exeErrorCode": 0,
[2025-10-13 12:59:18]     "exeErrorDiag": "",
[2025-10-13 12:59:18]     "pilotErrorCode": 0,
[2025-10-13 12:59:18]     "pilotErrorDiag": "",
[2025-10-13 12:59:18]  *** Listing of results directory ***
[2025-10-13 12:59:18] total 417532
[2025-10-13 12:59:18] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 16:23 pilot3.tar.gz
[2025-10-13 12:59:18] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:26 queuedata.json
[2025-10-13 12:59:18] -rwx------. 1 boincer umatlas     36292 Oct 12 16:27 runpilot2-wrapper.sh
[2025-10-13 12:59:18] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:59:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:00 run_atlas
[2025-10-13 12:59:18] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:00 job.xml
[2025-10-13 12:59:18] -rw-r--r--. 2 boincer umatlas 220662721 Oct 13 00:00 EVNT.46676267._004501.pool.root.1
[2025-10-13 12:59:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:00 start_atlas.sh
[2025-10-13 12:59:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:00 shared
[2025-10-13 12:59:18] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 00:00 input.tar.gz
[2025-10-13 12:59:18] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:00 boinc_lockfile
[2025-10-13 12:59:18] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:00 pandaJob.out
[2025-10-13 12:59:18] -rw-------. 1 boincer umatlas    974373 Oct 13 00:02 agis_schedconf.cvmfs.json
[2025-10-13 12:59:18] drwx------. 5 boincer umatlas      4096 Oct 13 00:02 pilot3
[2025-10-13 12:59:18] -rw-------. 1 boincer umatlas 193562095 Oct 13 12:55 HITS.46676269._088724.pool.root.1
[2025-10-13 12:59:18] -rw-r--r--. 1 boincer umatlas       532 Oct 13 12:55 boinc_task_state.xml
[2025-10-13 12:59:18] -rw-r--r--. 1 boincer umatlas      6860 Oct 13 12:56 init_data.xml
[2025-10-13 12:59:18] -rw-------. 1 boincer umatlas      1040 Oct 13 12:57 memory_monitor_summary.json
[2025-10-13 12:59:18] -rw-------. 1 boincer umatlas   1560580 Oct 13 12:57 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:59:18] -rw-------. 1 boincer umatlas    814095 Oct 13 12:57 log.46676269._088724.job.log.tgz.1
[2025-10-13 12:59:18] -rw-------. 1 boincer umatlas      7835 Oct 13 12:58 heartbeat.json
[2025-10-13 12:59:18] -rw-------. 1 boincer umatlas        96 Oct 13 12:58 pilot_heartbeat.json
[2025-10-13 12:59:18] -rw-r--r--. 1 boincer umatlas        29 Oct 13 12:58 wrapper_checkpoint.txt
[2025-10-13 12:59:18] -rw-------. 1 boincer umatlas      4824 Oct 13 12:59 pilotlog.txt
[2025-10-13 12:59:18] -rw-------. 1 boincer umatlas   3900175 Oct 13 12:59 log.46676269._088724.job.log.1
[2025-10-13 12:59:18] -rw-------. 1 boincer umatlas       357 Oct 13 12:59 output.list
[2025-10-13 12:59:18] -rw-r--r--. 1 boincer umatlas       620 Oct 13 12:59 runtime_log
[2025-10-13 12:59:18] -rw-------. 1 boincer umatlas   4730880 Oct 13 12:59 result.tar.gz
[2025-10-13 12:59:18] -rw-------. 1 boincer umatlas       662 Oct 13 12:59 UxEODmoqHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlSlNDmHCs32m.diag
[2025-10-13 12:59:18] -rw-r--r--. 1 boincer umatlas      8716 Oct 13 12:59 runtime_log.err
[2025-10-13 12:59:18] -rw-r--r--. 1 boincer umatlas     21066 Oct 13 12:59 stderr.txt
[2025-10-13 12:59:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 12:59 boinc_mmap_file
[2025-10-13 12:59:38] HITS file was successfully produced:
[2025-10-13 12:59:38] -rw-------. 1 boincer umatlas 193562095 Oct 13 12:55 shared/HITS.pool.root.1
[2025-10-13 12:59:38]  *** Contents of shared directory: ***
[2025-10-13 12:59:38] total 409724
[2025-10-13 12:59:38] -rw-r--r--. 2 boincer umatlas 220662721 Oct 13 00:00 ATLAS.root_0
[2025-10-13 12:59:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:00 start_atlas.sh
[2025-10-13 12:59:38] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 00:00 input.tar.gz
[2025-10-13 12:59:38] -rw-------. 1 boincer umatlas 193562095 Oct 13 12:55 HITS.pool.root.1
[2025-10-13 12:59:38] -rw-------. 1 boincer umatlas   4730880 Oct 13 12:59 result.tar.gz
12:59:40 (3026271): run_atlas exited; CPU time 120391.270820
12:59:40 (3026271): called boinc_finish(0)

</stderr_txt>
]]>

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