Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:47:28 (29038): wrapper (7.7.26015): starting
20:47:28 (29038): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:47:28] Arguments: --nthreads 8
[2025-10-12 20:47:28] Threads: 8
[2025-10-12 20:47:28] Checking for CVMFS
[2025-10-12 20:47:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:47:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:47:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:47:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:47:29] 2.11.2.0 2880 89336 86496 151642 0 59 14509261 20275201 1 130560 0 43878015 99.988 2827164 18235 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 20:47:29] CVMFS is ok
[2025-10-12 20:47:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:47:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:47:29] Further information can be found at the LHC@home message board.
[2025-10-12 20:47:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:47:29] Checking for apptainer binary...
[2025-10-12 20:47:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:47:29] Running /usr/bin/apptainer --version
[2025-10-12 20:47:29] apptainer version 1.3.2-1.el7
[2025-10-12 20:47:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:47:30] c-115-10.aglt2.org
[2025-10-12 20:47:30] apptainer works
[2025-10-12 20:47:30] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:47:30] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:47:30] Starting ATLAS job with PandaID=6840714677
[2025-10-12 20:47:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:35:03]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:35:03] 2025-10-13 02:34:17,792 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:35:03] 2025-10-13 02:34:17,795 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:35:03] 2025-10-13 02:34:17,795 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 22:35:03] 2025-10-13 02:34:17,796 | INFO     | sum of deviations: -5284586038.000002
[2025-10-12 22:35:03] 2025-10-13 02:34:17,796 | INFO     | mean x: 1760319669.0
[2025-10-12 22:35:03] 2025-10-13 02:34:17,796 | INFO     | mean y: 2512878.466666667
[2025-10-12 22:35:03] 2025-10-13 02:34:17,796 | INFO     | -- intersect: 25920160866.961575
[2025-10-12 22:35:03] 2025-10-13 02:34:17,796 | INFO     | intersect: 25920160866.961575
[2025-10-12 22:35:03] 2025-10-13 02:34:17,797 | INFO     | chi2: 2.2256814287777313
[2025-10-12 22:35:03] 2025-10-13 02:34:17,797 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 22:35:03] 2025-10-13 02:34:17,797 | INFO     | sum of deviations: 1891352885.0000026
[2025-10-12 22:35:03] 2025-10-13 02:34:17,798 | INFO     | mean x: 1760319516.5
[2025-10-12 22:35:03] 2025-10-13 02:34:17,798 | INFO     | mean y: 2534434.74
[2025-10-12 22:35:03] 2025-10-13 02:34:17,798 | INFO     | -- intersect: -10735605961.575638
[2025-10-12 22:35:03] 2025-10-13 02:34:17,798 | INFO     | intersect: -10735605961.575638
[2025-10-12 22:35:03] 2025-10-13 02:34:17,798 | INFO     | chi2: 1.4667531530748181
[2025-10-12 22:35:03] 2025-10-13 02:34:17,798 | INFO     | current chi2=1.4667531530748181 (change=34.098692916698816 %)
[2025-10-12 22:35:03] 2025-10-13 02:34:17,798 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 22:35:03] 2025-10-13 02:34:17,799 | INFO     | sum of deviations: 1979663256.0000021
[2025-10-12 22:35:03] 2025-10-13 02:34:17,799 | INFO     | mean x: 1760319364.0
[2025-10-12 22:35:03] 2025-10-13 02:34:17,799 | INFO     | mean y: 2534739.568421053
[2025-10-12 22:35:03] 2025-10-13 02:34:17,799 | INFO     | -- intersect: -13106830780.573807
[2025-10-12 22:35:03] 2025-10-13 02:34:17,799 | INFO     | intersect: -13106830780.573807
[2025-10-12 22:35:03] 2025-10-13 02:34:17,800 | INFO     | chi2: 1.4689466443323125
[2025-10-12 22:35:03] 2025-10-13 02:34:17,800 | INFO     | current chi2=1.4689466443323125 (change=-0.14954740358976154 %)
[2025-10-12 22:35:03] 2025-10-13 02:34:17,800 | INFO     | right removable region: 94
[2025-10-12 22:35:03] 2025-10-13 02:34:17,800 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 22:35:03] 2025-10-13 02:34:17,800 | INFO     | sum of deviations: -19331857669.5
[2025-10-12 22:35:03] 2025-10-13 02:34:17,801 | INFO     | mean x: 1760319821.5
[2025-10-12 22:35:03] 2025-10-13 02:34:17,801 | INFO     | mean y: 2555644.27
[2025-10-12 22:35:03] 2025-10-13 02:34:17,801 | INFO     | -- intersect: 109759037044.7486
[2025-10-12 22:35:03] 2025-10-13 02:34:17,801 | INFO     | intersect: 109759037044.7486
[2025-10-12 22:35:03] 2025-10-13 02:34:17,801 | INFO     | chi2: 0.901362734877097
[2025-10-12 22:35:03] 2025-10-13 02:34:17,801 | INFO     | current chi2=0.901362734877097 (change=59.50171829523263 %)
[2025-10-12 22:35:03] 2025-10-13 02:34:17,801 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 22:35:03] 2025-10-13 02:34:17,802 | INFO     | sum of deviations: -17429321929.0
[2025-10-12 22:35:03] 2025-10-13 02:34:17,802 | INFO     | mean x: 1760319974.0
[2025-10-12 22:35:03] 2025-10-13 02:34:17,802 | INFO     | mean y: 2548937.6842105263
[2025-10-12 22:35:03] 2025-10-13 02:34:17,802 | INFO     | -- intersect: 115419870757.57404
[2025-10-12 22:35:03] 2025-10-13 02:34:17,802 | INFO     | intersect: 115419870757.57404
[2025-10-12 22:35:03] 2025-10-13 02:34:17,803 | INFO     | chi2: 0.892420770216548
[2025-10-12 22:35:03] 2025-10-13 02:34:17,803 | INFO     | current chi2=0.892420770216548 (change=0.9920495173087261 %)
[2025-10-12 22:35:03] 2025-10-13 02:34:17,803 | INFO     | left removable region: 20
[2025-10-12 22:35:03] 2025-10-13 02:34:17,803 | INFO     | sum of square deviations: 125630262.5
[2025-10-12 22:35:03] 2025-10-13 02:34:17,803 | INFO     | sum of deviations: -4304996828.500001
[2025-10-12 22:35:03] 2025-10-13 02:34:17,803 | INFO     | mean x: 1760319943.5
[2025-10-12 22:35:03] 2025-10-13 02:34:17,803 | INFO     | mean y: 2550217.391891892
[2025-10-12 22:35:03] 2025-10-13 02:34:17,804 | INFO     | -- intersect: 60323778742.34861
[2025-10-12 22:35:03] 2025-10-13 02:34:17,804 | INFO     | intersect: 60323778742.34861
[2025-10-12 22:35:03] 2025-10-13 02:34:17,804 | INFO     | chi2: 0.06328630468965801
[2025-10-12 22:35:03] 2025-10-13 02:34:17,804 | INFO     | -- intersect: 60323778742.34861
[2025-10-12 22:35:03] 2025-10-13 02:34:17,804 | INFO     | current memory leak: -34.27 B/s (using 74 data points, chi2=0.06)
[2025-10-12 22:35:03] 2025-10-13 02:34:17,804 | INFO     | could have reported an average CPU frequency of 2080 MHz (7 samples)
[2025-10-12 22:35:03] 2025-10-13 02:34:17,805 | INFO     | ..............................
[2025-10-12 22:35:03] 2025-10-13 02:34:17,805 | INFO     | . Timing measurements:
[2025-10-12 22:35:03] 2025-10-13 02:34:17,805 | INFO     | . get job = 0 s
[2025-10-12 22:35:03] 2025-10-13 02:34:17,805 | INFO     | . initial setup = 2 s
[2025-10-12 22:35:03] 2025-10-13 02:34:17,805 | INFO     | . payload setup = 7 s
[2025-10-12 22:35:03] 2025-10-13 02:34:17,805 | INFO     | . stage-in = 0 s
[2025-10-12 22:35:03] 2025-10-13 02:34:17,805 | INFO     | . payload execution = 6354 s
[2025-10-12 22:35:03] 2025-10-13 02:34:17,805 | INFO     | . stage-out = 0 s
[2025-10-12 22:35:03] 2025-10-13 02:34:17,806 | INFO     | . log creation = 0 s
[2025-10-12 22:35:03] 2025-10-13 02:34:17,806 | INFO     | ..............................
[2025-10-12 22:35:03] 2025-10-13 02:34:17,900 | INFO     | 
[2025-10-12 22:35:03] 2025-10-13 02:34:17,900 | INFO     | job summary report
[2025-10-12 22:35:03] 2025-10-13 02:34:17,900 | INFO     | --------------------------------------------------
[2025-10-12 22:35:03] 2025-10-13 02:34:17,900 | INFO     | PanDA job id: 6840714677
[2025-10-12 22:35:03] 2025-10-13 02:34:17,901 | INFO     | task id: 46676269
[2025-10-12 22:35:03] 2025-10-13 02:34:17,901 | INFO     | errors: (none)
[2025-10-12 22:35:03] 2025-10-13 02:34:17,901 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:35:03] 2025-10-13 02:34:17,901 | INFO     | pilot state: finished 
[2025-10-12 22:35:03] 2025-10-13 02:34:17,901 | INFO     | transexitcode: 0
[2025-10-12 22:35:03] 2025-10-13 02:34:17,901 | INFO     | exeerrorcode: 0
[2025-10-12 22:35:03] 2025-10-13 02:34:17,902 | INFO     | exeerrordiag: 
[2025-10-12 22:35:03] 2025-10-13 02:34:17,902 | INFO     | exitcode: 0
[2025-10-12 22:35:03] 2025-10-13 02:34:17,902 | INFO     | exitmsg: OK
[2025-10-12 22:35:03] 2025-10-13 02:34:17,902 | INFO     | cpuconsumptiontime: 46589 s
[2025-10-12 22:35:03] 2025-10-13 02:34:17,902 | INFO     | nevents: 400
[2025-10-12 22:35:03] 2025-10-13 02:34:17,903 | INFO     | neventsw: 0
[2025-10-12 22:35:03] 2025-10-13 02:34:17,903 | INFO     | pid: 6920
[2025-10-12 22:35:03] 2025-10-13 02:34:17,903 | INFO     | pgrp: 6920
[2025-10-12 22:35:03] 2025-10-13 02:34:17,903 | INFO     | corecount: 8
[2025-10-12 22:35:03] 2025-10-13 02:34:17,903 | INFO     | event service: False
[2025-10-12 22:35:03] 2025-10-13 02:34:17,903 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 6366: 2376144, 6368: 2385198, 6374: 2385336}
[2025-10-12 22:35:03] 2025-10-13 02:34:17,904 | INFO     | --------------------------------------------------
[2025-10-12 22:35:03] 2025-10-13 02:34:17,904 | INFO     | 
[2025-10-12 22:35:03] 2025-10-13 02:34:17,904 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 22:35:03] 2025-10-13 02:34:17,932 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:35:03] 2025-10-13 02:34:17,933 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:35:03] 2025-10-13 02:34:17,933 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:35:03] 2025-10-13 02:34:17,933 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:35:03] 2025-10-13 02:34:17,933 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:35:03] 2025-10-13 02:34:17,933 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:35:03] 2025-10-13 02:34:17,934 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:35:03] 2025-10-13 02:34:17,934 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:35:03] 2025-10-13 02:34:17,934 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:35:03] 2025-10-13 02:34:17,934 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:35:03] 2025-10-13 02:34:17,934 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:35:03] 2025-10-13 02:34:17,935 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:35:03] 2025-10-13 02:34:17,935 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:35:03] 2025-10-13 02:34:17,935 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:35:03] 2025-10-13 02:34:17,935 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:35:03] 2025-10-13 02:34:17,935 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:35:03] 2025-10-13 02:34:17,936 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:35:03] 2025-10-13 02:34:17,936 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:35:03] 2025-10-13 02:34:17,936 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:35:03] 2025-10-13 02:34:17,936 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:35:03] 2025-10-13 02:34:17,936 | INFO     | job 6840714677 has completed (purged errors)
[2025-10-12 22:35:03] 2025-10-13 02:34:17,937 | INFO     | overall cleanup function is called
[2025-10-12 22:35:03] 2025-10-13 02:34:18,940 | INFO     | --- collectZombieJob: --- 10, [6920]
[2025-10-12 22:35:03] 2025-10-13 02:34:18,940 | INFO     | zombie collector waiting for pid 6920
[2025-10-12 22:35:03] 2025-10-13 02:34:18,940 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:35:03] 2025-10-13 02:34:18,940 | INFO     | collected zombie processes
[2025-10-12 22:35:03] 2025-10-13 02:34:18,941 | INFO     | will attempt to kill all subprocesses of pid=6920
[2025-10-12 22:35:03] 2025-10-13 02:34:19,026 | INFO     | process IDs to be killed: [6920] (in reverse order)
[2025-10-12 22:35:03] 2025-10-13 02:34:19,085 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:35:03] 2025-10-13 02:34:19,086 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:35:03] 2025-10-13 02:34:19,089 | INFO     | did not find any defunct processes belonging to 6920
[2025-10-12 22:35:03] 2025-10-13 02:34:19,093 | INFO     | did not find any defunct processes belonging to 6920
[2025-10-12 22:35:03] 2025-10-13 02:34:19,093 | INFO     | ready for new job
[2025-10-12 22:35:03] 2025-10-13 02:34:19,093 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:35:03] 2025-10-13 02:34:19,095 | INFO     | ***************************************
[2025-10-12 22:35:03] 2025-10-13 02:34:19,095 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:35:03] 2025-10-13 02:34:19,096 | INFO     | ***************************************
[2025-10-12 22:35:03] 2025-10-13 02:34:19,096 | INFO     | 
[2025-10-12 22:35:03] 2025-10-13 02:34:19,096 | INFO     | architecture information:
[2025-10-12 22:35:03] 2025-10-13 02:34:19,097 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:35:03] 2025-10-13 02:34:19,116 | INFO     | cat /etc/os-release:
[2025-10-12 22:35:03] NAME="CentOS Linux"
[2025-10-12 22:35:03] VERSION="7 (Core)"
[2025-10-12 22:35:03] ID="centos"
[2025-10-12 22:35:03] ID_LIKE="rhel fedora"
[2025-10-12 22:35:03] VERSION_ID="7"
[2025-10-12 22:35:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:35:03] ANSI_COLOR="0;31"
[2025-10-12 22:35:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:35:03] HOME_URL="https://www.centos.org/"
[2025-10-12 22:35:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:35:03] 
[2025-10-12 22:35:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:35:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:35:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:35:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:35:03] 
[2025-10-12 22:35:03] 2025-10-13 02:34:19,117 | INFO     | ***************************************
[2025-10-12 22:35:03] 2025-10-13 02:34:19,618 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 22:35:03] 2025-10-13 02:34:19,639 | INFO     | sufficient remaining disk space (18591252480 B)
[2025-10-12 22:35:03] 2025-10-13 02:34:19,640 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:35:03] 2025-10-13 02:34:19,640 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:35:03] 2025-10-13 02:34:19,640 | INFO     | update_server=False
[2025-10-12 22:35:03] 2025-10-13 02:34:19,640 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:35:03] 2025-10-13 02:34:19,641 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:35:03] 2025-10-13 02:34:19,839 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:35:03] 2025-10-13 02:34:19,936 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 22:35:03] 2025-10-13 02:34:19,936 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 22:35:03] 2025-10-13 02:34:19,936 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:35:03] 2025-10-13 02:34:19,937 | INFO     | will abort loop
[2025-10-12 22:35:03] 2025-10-13 02:34:20,460 | INFO     | all payload control threads have been joined
[2025-10-12 22:35:03] 2025-10-13 02:34:20,646 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:35:03] 2025-10-13 02:34:20,646 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:35:03] 2025-10-13 02:34:20,680 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:35:03] 2025-10-13 02:34:20,712 | INFO     | all data control threads have been joined
[2025-10-12 22:35:03] 2025-10-13 02:34:20,942 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:35:03] 2025-10-13 02:34:20,955 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:35:03] 2025-10-13 02:34:20,998 | INFO     | all job control threads have been joined
[2025-10-12 22:35:03] 2025-10-13 02:34:21,400 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:35:03] 2025-10-13 02:34:21,464 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:35:03] 2025-10-13 02:34:21,469 | INFO     | [payload] control thread has finished
[2025-10-12 22:35:03] 2025-10-13 02:34:21,470 | INFO     | [job] validate thread has finished
[2025-10-12 22:35:03] 2025-10-13 02:34:21,717 | INFO     | [data] control thread has finished
[2025-10-12 22:35:03] 2025-10-13 02:34:21,758 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:35:03] 2025-10-13 02:34:21,841 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:35:03] 2025-10-13 02:34:21,872 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:35:03] 2025-10-13 02:34:21,999 | INFO     | [job] control thread has finished
[2025-10-12 22:35:03] 2025-10-13 02:34:22,503 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:35:03] 2025-10-13 02:34:26,509 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:35:03] 2025-10-13 02:34:30,105 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:35:03] 2025-10-13 02:34:31,106 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:35:03] 2025-10-13 02:34:50,175 | INFO     | PID=32717 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 22:35:03] 2025-10-13 02:34:50,176 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:35:03] 2025-10-13 02:34:50,176 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:35:03] 2025-10-13 02:34:50,176 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:35:03] 2025-10-13 02:34:57,202 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:35:03] 2025-10-13 02:34:58,499 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140096037783360)>', '<ExcThread(monitor, started 140095239739136)>']
[2025-10-12 22:35:03] 2025-10-13 02:34:59,222 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:35:03] 2025-10-13 02:34:59,223 | INFO     | [monitor] control thread has ended
[2025-10-12 22:35:03] 2025-10-13 02:35:03,525 | INFO     | all workflow threads have been joined
[2025-10-12 22:35:03] 2025-10-13 02:35:03,525 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:35:03] 2025-10-13 02:35:03,526 | INFO     | traces error code: 0
[2025-10-12 22:35:03] 2025-10-13 02:35:03,526 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:35:03] 2025-10-13 02:35:03,634 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:35:03] 2025-10-13 02:35:03,639 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:35:03] 2025-10-13 02:35:03,643 [wrapper] pilotpid: 32717
[2025-10-12 22:35:03] 2025-10-13 02:35:03,647 [wrapper] Pilot exit status: 0
[2025-10-12 22:35:03] 2025-10-13 02:35:03,665 [wrapper] pandaids: 6840714677
[2025-10-12 22:35:03] 2025-10-13 02:35:03,716 [wrapper] cleanup supervisor_pilot 15392 32718
[2025-10-12 22:35:03] 2025-10-13 02:35:03,721 [wrapper] Test setup, not cleaning
[2025-10-12 22:35:03] 2025-10-13 02:35:03,726 [wrapper] apfmon messages muted
[2025-10-12 22:35:03] 2025-10-13 02:35:03,730 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:35:03] 2025-10-13 02:35:03,733 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:35:03]  *** Error codes and diagnostics ***
[2025-10-12 22:35:03]     "exeErrorCode": 0,
[2025-10-12 22:35:03]     "exeErrorDiag": "",
[2025-10-12 22:35:03]     "pilotErrorCode": 0,
[2025-10-12 22:35:03]     "pilotErrorDiag": "",
[2025-10-12 22:35:03]  *** Listing of results directory ***
[2025-10-12 22:35:03] total 408508
[2025-10-12 22:35:03] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 15:50 pilot3.tar.gz
[2025-10-12 22:35:03] -rwx------ 1 boincer umatlas     36292 Oct 12 15:59 runpilot2-wrapper.sh
[2025-10-12 22:35:03] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 15:59 queuedata.json
[2025-10-12 22:35:03] -rw-r--r-- 1 boincer umatlas       100 Oct 12 20:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:35:03] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 20:47 run_atlas
[2025-10-12 22:35:03] -rw-r--r-- 1 boincer umatlas       105 Oct 12 20:47 job.xml
[2025-10-12 22:35:03] -rw-r--r-- 2 boincer umatlas 222627439 Oct 12 20:47 EVNT.46676267._004477.pool.root.1
[2025-10-12 22:35:03] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:47 start_atlas.sh
[2025-10-12 22:35:03] drwxrwx--x 2 boincer umatlas      4096 Oct 12 20:47 shared
[2025-10-12 22:35:03] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 20:47 input.tar.gz
[2025-10-12 22:35:03] -rw-r--r-- 1 boincer umatlas         0 Oct 12 20:47 boinc_lockfile
[2025-10-12 22:35:03] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 20:47 pandaJob.out
[2025-10-12 22:35:03] -rw------- 1 boincer umatlas    975603 Oct 12 20:47 agis_schedconf.cvmfs.json
[2025-10-12 22:35:03] -rw------- 1 boincer umatlas   1560580 Oct 12 20:47 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:35:03] drwx------ 5 boincer umatlas      4096 Oct 12 20:47 pilot3
[2025-10-12 22:35:03] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 22:28 init_data.xml
[2025-10-12 22:35:03] -rw------- 1 boincer umatlas 189259687 Oct 12 22:33 HITS.46676269._088073.pool.root.1
[2025-10-12 22:35:03] -rw------- 1 boincer umatlas      1051 Oct 12 22:34 memory_monitor_summary.json
[2025-10-12 22:35:03] -rw-r--r-- 1 boincer umatlas       529 Oct 12 22:34 boinc_task_state.xml
[2025-10-12 22:35:03] -rw------- 1 boincer umatlas    356202 Oct 12 22:34 log.46676269._088073.job.log.tgz.1
[2025-10-12 22:35:03] -rw------- 1 boincer umatlas        95 Oct 12 22:34 pilot_heartbeat.json
[2025-10-12 22:35:03] -rw------- 1 boincer umatlas      7854 Oct 12 22:34 heartbeat.json
[2025-10-12 22:35:03] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 22:35 boinc_mmap_file
[2025-10-12 22:35:03] -rw------- 1 boincer umatlas      5004 Oct 12 22:35 pilotlog.txt
[2025-10-12 22:35:03] -rw------- 1 boincer umatlas    906530 Oct 12 22:35 log.46676269._088073.job.log.1
[2025-10-12 22:35:03] -rw------- 1 boincer umatlas       357 Oct 12 22:35 output.list
[2025-10-12 22:35:03] -rw-r--r-- 1 boincer umatlas       620 Oct 12 22:35 runtime_log
[2025-10-12 22:35:03] -rw------- 1 boincer umatlas   1280000 Oct 12 22:35 result.tar.gz
[2025-10-12 22:35:03] -rw------- 1 boincer umatlas       658 Oct 12 22:35 Vx4MDm0OHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmbtUMDm9T1CNm.diag
[2025-10-12 22:35:03] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 22:35 runtime_log.err
[2025-10-12 22:35:03] -rw-r--r-- 1 boincer umatlas        27 Oct 12 22:35 wrapper_checkpoint.txt
[2025-10-12 22:35:03] -rw-r--r-- 1 boincer umatlas     20837 Oct 12 22:35 stderr.txt
[2025-10-12 22:35:03] HITS file was successfully produced:
[2025-10-12 22:35:03] -rw------- 1 boincer umatlas 189259687 Oct 12 22:33 shared/HITS.pool.root.1
[2025-10-12 22:35:03]  *** Contents of shared directory: ***
[2025-10-12 22:35:03] total 404068
[2025-10-12 22:35:03] -rw-r--r-- 2 boincer umatlas 222627439 Oct 12 20:47 ATLAS.root_0
[2025-10-12 22:35:03] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:47 start_atlas.sh
[2025-10-12 22:35:03] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 20:47 input.tar.gz
[2025-10-12 22:35:03] -rw------- 1 boincer umatlas 189259687 Oct 12 22:33 HITS.pool.root.1
[2025-10-12 22:35:03] -rw------- 1 boincer umatlas   1280000 Oct 12 22:35 result.tar.gz
22:35:05 (29038): run_atlas exited; CPU time 46600.989199
22:35:05 (29038): called boinc_finish(0)

</stderr_txt>
]]>

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