Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:01:11 (3276289): wrapper (7.7.26015): starting
13:01:11 (3276289): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 13:01:11] Arguments: --nthreads 3
[2025-10-13 13:01:11] Threads: 3
[2025-10-13 13:01:11] Checking for CVMFS
[2025-10-13 13:01:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 13:01:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 13:01:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 13:01:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 13:01:11] 2.9.2.0 1621947 5557 87204 151658 2 57 24393596 36864000 0 130560 0 4326640 99.987 318638 1143 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 13:01:11] CVMFS is ok
[2025-10-13 13:01:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 13:01:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 13:01:11] Further information can be found at the LHC@home message board.
[2025-10-13 13:01:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 13:01:11] Checking for apptainer binary...
[2025-10-13 13:01:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 13:01:11] Running /usr/bin/apptainer --version
[2025-10-13 13:01:11] apptainer version 1.4.1-1.1
[2025-10-13 13:01:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 13:01:11] thA305
[2025-10-13 13:01:11] apptainer works
[2025-10-13 13:01:11] Set ATHENA_PROC_NUMBER=3
[2025-10-13 13:01:11] Set ATHENA_CORE_NUMBER=3
[2025-10-13 13:01:11] Starting ATLAS job with PandaID=6840749174
[2025-10-13 13:01:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 14:27:31]  *** The last 200 lines of the pilot log: ***
[2025-10-13 14:27:31] 2025-10-13 12:26:42,179 | INFO     | all payload control threads have been joined
[2025-10-13 14:27:31] 2025-10-13 12:26:42,268 | INFO     | all job control threads have been joined
[2025-10-13 14:27:31] 2025-10-13 12:26:42,275 | INFO     | all data control threads have been joined
[2025-10-13 14:27:31] 2025-10-13 12:26:42,375 | INFO     | [job] retrieve thread has finished
[2025-10-13 14:27:31] 2025-10-13 12:26:42,375 | INFO     | [job] queue monitor thread has finished
[2025-10-13 14:27:31] 2025-10-13 12:26:42,375 | INFO     | [job] job monitor thread has finished
[2025-10-13 14:27:31] 2025-10-13 12:26:42,468 | INFO     | [payload] validate_post thread has finished
[2025-10-13 14:27:31] 2025-10-13 12:26:42,948 | INFO     | [payload] failed_post thread has finished
[2025-10-13 14:27:31] 2025-10-13 12:26:43,181 | INFO     | [payload] control thread has finished
[2025-10-13 14:27:31] 2025-10-13 12:26:43,255 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 14:27:31] 2025-10-13 12:26:43,255 | INFO     | [data] copytool_in thread has finished
[2025-10-13 14:27:31] 2025-10-13 12:26:43,272 | INFO     | [job] control thread has finished
[2025-10-13 14:27:31] 2025-10-13 12:26:43,281 | INFO     | [data] control thread has finished
[2025-10-13 14:27:31] 2025-10-13 12:26:43,792 | INFO     | [job] validate thread has finished
[2025-10-13 14:27:31] 2025-10-13 12:26:43,849 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 14:27:31] 2025-10-13 12:26:43,858 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 14:27:31] 2025-10-13 12:26:44,182 | INFO     | [data] copytool_out thread has finished
[2025-10-13 14:27:31] 2025-10-13 12:26:45,376 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 14:27:31] 2025-10-13 12:26:52,040 | INFO     | job.realtimelogging is not enabled
[2025-10-13 14:27:31] 2025-10-13 12:26:53,046 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 14:27:31] 2025-10-13 12:27:12,383 | INFO     | PID=3280004 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 14:27:31] 2025-10-13 12:27:12,383 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 14:27:31] 2025-10-13 12:27:12,383 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 14:27:31] 2025-10-13 12:27:12,383 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 14:27:31] 2025-10-13 12:27:24,963 | INFO     | [monitor] cgroup control has ended
[2025-10-13 14:27:31] 2025-10-13 12:27:26,298 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139787406436160)>', '<ExcThread(monitor, started 139787059050240)>']
[2025-10-13 14:27:31] 2025-10-13 12:27:26,455 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 14:27:31] 2025-10-13 12:27:26,456 | INFO     | [monitor] control thread has ended
[2025-10-13 14:27:31] 2025-10-13 12:27:31,324 | INFO     | all workflow threads have been joined
[2025-10-13 14:27:31] 2025-10-13 12:27:31,324 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 14:27:31] 2025-10-13 12:27:31,324 | INFO     | traces error code: 0
[2025-10-13 14:27:31] 2025-10-13 12:27:31,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 14:27:31] 2025-10-13 12:27:31,376 [wrapper] ==== pilot stdout END ====
[2025-10-13 14:27:31] 2025-10-13 12:27:31,378 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 14:27:31] 2025-10-13 12:27:31,381 [wrapper] pilotpid: 3280004
[2025-10-13 14:27:31] 2025-10-13 12:27:31,383 [wrapper] Pilot exit status: 0
[2025-10-13 14:27:31] 2025-10-13 12:27:31,390 [wrapper] pandaids: 6840749174
[2025-10-13 14:27:31] 2025-10-13 12:27:31,408 [wrapper] cleanup supervisor_pilot 3298329 3280005
[2025-10-13 14:27:31] 2025-10-13 12:27:31,410 [wrapper] Test setup, not cleaning
[2025-10-13 14:27:31] 2025-10-13 12:27:31,412 [wrapper] apfmon messages muted
[2025-10-13 14:27:31] 2025-10-13 12:27:31,415 [wrapper] ==== wrapper stdout END ====
[2025-10-13 14:27:31] 2025-10-13 12:27:31,417 [wrapper] ==== wrapper stderr END ====
[2025-10-13 14:27:31]  *** Error codes and diagnostics ***
[2025-10-13 14:27:31]     "exeErrorCode": 0,
[2025-10-13 14:27:31]     "exeErrorDiag": "",
[2025-10-13 14:27:31]     "pilotErrorCode": 0,
[2025-10-13 14:27:31]     "pilotErrorDiag": "",
[2025-10-13 14:27:31]  *** Listing of results directory ***
[2025-10-13 14:27:31] total 408444
[2025-10-13 14:27:31] -rw-r--r-- 1 boinc boinc    557409 Oct 12 22:23 pilot3.tar.gz
[2025-10-13 14:27:31] -rw-r--r-- 1 boinc boinc      5112 Oct 12 22:28 queuedata.json
[2025-10-13 14:27:31] -rwx------ 1 boinc boinc     36292 Oct 12 22:30 runpilot2-wrapper.sh
[2025-10-13 14:27:31] -rw-r--r-- 1 boinc boinc       100 Oct 13 13:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 14:27:31] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 13:01 run_atlas
[2025-10-13 14:27:31] -rw-r--r-- 1 boinc boinc       105 Oct 13 13:01 job.xml
[2025-10-13 14:27:31] -rw-r--r-- 2 boinc boinc 218589888 Oct 13 13:01 EVNT.46676267._004500.pool.root.1
[2025-10-13 14:27:31] drwxrwx--x 2 boinc boinc      4096 Oct 13 13:01 shared
[2025-10-13 14:27:31] -rw-r--r-- 2 boinc boinc    569681 Oct 13 13:01 input.tar.gz
[2025-10-13 14:27:31] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:01 start_atlas.sh
[2025-10-13 14:27:31] -rw-r--r-- 1 boinc boinc         0 Oct 13 13:01 boinc_setup_complete
[2025-10-13 14:27:31] -rw-r--r-- 1 boinc boinc      6439 Oct 13 13:01 init_data.xml
[2025-10-13 14:27:31] -rw-r--r-- 1 boinc boinc         0 Oct 13 13:01 boinc_lockfile
[2025-10-13 14:27:31] -rw-r--r-- 1 boinc boinc      2550 Oct 13 13:01 pandaJob.out
[2025-10-13 14:27:31] -rw------- 1 boinc boinc    972497 Oct 13 13:01 agis_schedconf.cvmfs.json
[2025-10-13 14:27:31] -rw------- 1 boinc boinc   1560580 Oct 13 13:01 agis_ddmendpoints.agis.ALL.json
[2025-10-13 14:27:31] drwx------ 5 boinc boinc      4096 Oct 13 13:01 pilot3
[2025-10-13 14:27:31] -rw-r--r-- 1 boinc boinc       529 Oct 13 14:26 boinc_task_state.xml
[2025-10-13 14:27:31] -rw------- 1 boinc boinc 193768472 Oct 13 14:26 HITS.46676269._088695.pool.root.1
[2025-10-13 14:27:31] -rw------- 1 boinc boinc      1018 Oct 13 14:26 memory_monitor_summary.json
[2025-10-13 14:27:31] -rw------- 1 boinc boinc    252484 Oct 13 14:26 log.46676269._088695.job.log.tgz.1
[2025-10-13 14:27:31] -rw------- 1 boinc boinc      7755 Oct 13 14:26 heartbeat.json
[2025-10-13 14:27:31] -rw-r--r-- 1 boinc boinc        27 Oct 13 14:27 wrapper_checkpoint.txt
[2025-10-13 14:27:31] -rw-r--r-- 1 boinc boinc      8192 Oct 13 14:27 boinc_mmap_file
[2025-10-13 14:27:31] -rw------- 1 boinc boinc        95 Oct 13 14:27 pilot_heartbeat.json
[2025-10-13 14:27:31] -rw------- 1 boinc boinc      4824 Oct 13 14:27 pilotlog.txt
[2025-10-13 14:27:31] -rw------- 1 boinc boinc    749233 Oct 13 14:27 log.46676269._088695.job.log.1
[2025-10-13 14:27:31] -rw------- 1 boinc boinc       357 Oct 13 14:27 output.list
[2025-10-13 14:27:31] -rw-r--r-- 1 boinc boinc       620 Oct 13 14:27 runtime_log
[2025-10-13 14:27:31] -rw------- 1 boinc boinc   1024000 Oct 13 14:27 result.tar.gz
[2025-10-13 14:27:31] -rw-r--r-- 1 boinc boinc      8777 Oct 13 14:27 runtime_log.err
[2025-10-13 14:27:31] -rw------- 1 boinc boinc       658 Oct 13 14:27 jyIMDmmsHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5SlNDmnBqdbn.diag
[2025-10-13 14:27:31] -rw-r--r-- 1 boinc boinc      6698 Oct 13 14:27 stderr.txt
[2025-10-13 14:27:31] HITS file was successfully produced:
[2025-10-13 14:27:31] -rw------- 1 boinc boinc 193768472 Oct 13 14:26 shared/HITS.pool.root.1
[2025-10-13 14:27:31]  *** Contents of shared directory: ***
[2025-10-13 14:27:31] total 404280
[2025-10-13 14:27:31] -rw-r--r-- 2 boinc boinc 218589888 Oct 13 13:01 ATLAS.root_0
[2025-10-13 14:27:31] -rw-r--r-- 2 boinc boinc    569681 Oct 13 13:01 input.tar.gz
[2025-10-13 14:27:31] -rw-r--r-- 2 boinc boinc     15120 Oct 13 13:01 start_atlas.sh
[2025-10-13 14:27:31] -rw------- 1 boinc boinc 193768472 Oct 13 14:26 HITS.pool.root.1
[2025-10-13 14:27:31] -rw------- 1 boinc boinc   1024000 Oct 13 14:27 result.tar.gz
14:27:32 (3276289): run_atlas exited; CPU time 14658.302725
14:27:32 (3276289): called boinc_finish(0)

</stderr_txt>
]]>

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