Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:40:42 (559597): wrapper (7.7.26015): starting
22:40:42 (559597): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 22:40:42] Arguments: --nthreads 4
[2025-10-13 22:40:42] Threads: 4
[2025-10-13 22:40:42] Checking for CVMFS
[2025-10-13 22:40:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 22:40:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 22:40:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 22:40:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 22:40:42] 2.12.7.0 3347374 8010 65204 151672 3 57 3695816 6144000 0 130560 3 15948609 99.996 274576 383 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2025-10-13 22:40:42] CVMFS is ok
[2025-10-13 22:40:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 22:40:42] Checking for apptainer binary...
[2025-10-13 22:40:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 22:40:42] Running /usr/bin/apptainer --version
[2025-10-13 22:40:42] apptainer version 1.4.2
[2025-10-13 22:40:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 22:40:42] Ryzen8
[2025-10-13 22:40:42] apptainer works
[2025-10-13 22:40:42] Set ATHENA_PROC_NUMBER=4
[2025-10-13 22:40:42] Set ATHENA_CORE_NUMBER=4
[2025-10-13 22:40:42] Starting ATLAS job with PandaID=6840749035
[2025-10-13 22:40:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 23:59:01]  *** The last 200 lines of the pilot log: ***
[2025-10-13 23:59:01] 2025-10-13 21:57:48,588 | INFO     | time since job start (4621s) is within the limit (172800.0s)
[2025-10-13 23:59:01] 2025-10-13 21:57:50,592 | INFO     | time since job start (4623s) is within the limit (172800.0s)
[2025-10-13 23:59:01] 2025-10-13 21:57:50,898 | INFO     | monitor loop #364: job 0:6840749035 is in state 'finished'
[2025-10-13 23:59:01] 2025-10-13 21:57:50,898 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 23:59:01] 2025-10-13 21:57:52,595 | INFO     | time since job start (4625s) is within the limit (172800.0s)
[2025-10-13 23:59:01] 2025-10-13 21:57:53,401 | INFO     | monitor loop #365: job 0:6840749035 is in state 'finished'
[2025-10-13 23:59:01] 2025-10-13 21:57:53,401 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 23:59:01] 2025-10-13 21:57:54,601 | INFO     | time since job start (4627s) is within the limit (172800.0s)
[2025-10-13 23:59:01] 2025-10-13 21:57:55,902 | INFO     | monitor loop #366: job 0:6840749035 is in state 'finished'
[2025-10-13 23:59:01] 2025-10-13 21:57:55,902 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 23:59:01] 2025-10-13 21:57:56,605 | INFO     | time since job start (4629s) is within the limit (172800.0s)
[2025-10-13 23:59:01] 2025-10-13 21:57:58,405 | INFO     | monitor loop #367: job 0:6840749035 is in state 'finished'
[2025-10-13 23:59:01] 2025-10-13 21:57:58,405 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 23:59:01] 2025-10-13 21:57:58,608 | INFO     | time since job start (4631s) is within the limit (172800.0s)
[2025-10-13 23:59:01] 2025-10-13 21:58:00,612 | INFO     | time since job start (4633s) is within the limit (172800.0s)
[2025-10-13 23:59:01] 2025-10-13 21:58:00,908 | INFO     | monitor loop #368: job 0:6840749035 is in state 'finished'
[2025-10-13 23:59:01] 2025-10-13 21:58:00,908 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 23:59:01] 2025-10-13 21:58:02,615 | INFO     | time since job start (4635s) is within the limit (172800.0s)
[2025-10-13 23:59:01] 2025-10-13 21:58:03,411 | INFO     | monitor loop #369: job 0:6840749035 is in state 'finished'
[2025-10-13 23:59:01] 2025-10-13 21:58:03,411 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 23:59:01] 2025-10-13 21:58:04,618 | INFO     | time since job start (4637s) is within the limit (172800.0s)
[2025-10-13 23:59:01] 2025-10-13 21:58:05,914 | INFO     | monitor loop #370: job 0:6840749035 is in state 'finished'
[2025-10-13 23:59:01] 2025-10-13 21:58:05,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 23:59:01] 2025-10-13 21:58:06,622 | INFO     | time since job start (4639s) is within the limit (172800.0s)
[2025-10-13 23:59:01] 2025-10-13 21:58:07,676 | INFO     | PID=563309 has CPU usage=0.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 23:59:01] 2025-10-13 21:58:08,415 | INFO     | monitor loop #371: job 0:6840749035 is in state 'finished'
[2025-10-13 23:59:01] 2025-10-13 21:58:08,415 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 23:59:01] 2025-10-13 21:58:08,677 | INFO     | time since job start (4641s) is within the limit (172800.0s)
[2025-10-13 23:59:01] 2025-10-13 21:58:10,682 | INFO     | time since job start (4643s) is within the limit (172800.0s)
[2025-10-13 23:59:01] 2025-10-13 21:58:10,917 | INFO     | monitor loop #372: job 0:6840749035 is in state 'finished'
[2025-10-13 23:59:01] 2025-10-13 21:58:10,917 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 23:59:01] 2025-10-13 21:58:12,687 | INFO     | time since job start (4645s) is within the limit (172800.0s)
[2025-10-13 23:59:01] 2025-10-13 21:58:13,421 | INFO     | monitor loop #373: job 0:6840749035 is in state 'finished'
[2025-10-13 23:59:01] 2025-10-13 21:58:13,421 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 23:59:01] 2025-10-13 21:58:14,692 | INFO     | time since job start (4647s) is within the limit (172800.0s)
[2025-10-13 23:59:01] 2025-10-13 21:58:15,922 | INFO     | monitor loop #374: job 0:6840749035 is in state 'finished'
[2025-10-13 23:59:01] 2025-10-13 21:58:15,922 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 23:59:01] 2025-10-13 21:58:15,980 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 23:59:01] 2025-10-13 21:58:15,981 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4344.637749999999
[2025-10-13 23:59:01] 2025-10-13 21:58:15,982 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6840749035/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 23:59:01] 2025-10-13 21:58:15,983 | INFO     | extracted standard info from prmon json
[2025-10-13 23:59:01] 2025-10-13 21:58:15,983 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 23:59:01] 2025-10-13 21:58:15,983 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 23:59:01] 2025-10-13 21:58:15,983 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 23:59:01] 2025-10-13 21:58:15,983 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 23:59:01] 2025-10-13 21:58:15,984 | INFO     | fitting pss+swap vs Time
[2025-10-13 23:59:01] 2025-10-13 21:58:15,984 | INFO     | sum of square deviations: 97479037.0
[2025-10-13 23:59:01] 2025-10-13 21:58:15,984 | INFO     | sum of deviations: -7674095118.0
[2025-10-13 23:59:01] 2025-10-13 21:58:15,984 | INFO     | mean x: 1760390414.5
[2025-10-13 23:59:01] 2025-10-13 21:58:15,984 | INFO     | mean y: 2496043.705882353
[2025-10-13 23:59:01] 2025-10-13 21:58:15,984 | INFO     | -- intersect: 138590277596.04565
[2025-10-13 23:59:01] 2025-10-13 21:58:15,984 | INFO     | intersect: 138590277596.04565
[2025-10-13 23:59:01] 2025-10-13 21:58:15,984 | INFO     | chi2: 0.055201579651192684
[2025-10-13 23:59:01] 2025-10-13 21:58:15,984 | INFO     | -- intersect: 138590277596.04565
[2025-10-13 23:59:01] 2025-10-13 21:58:15,984 | INFO     | current memory leak: -78.73 B/s (using 68 data points, chi2=0.06)
[2025-10-13 23:59:01] 2025-10-13 21:58:15,984 | INFO     | could have reported an average CPU frequency of 4336 MHz (6 samples)
[2025-10-13 23:59:01] 2025-10-13 21:58:15,984 | INFO     | ..............................
[2025-10-13 23:59:01] 2025-10-13 21:58:15,984 | INFO     | . Timing measurements:
[2025-10-13 23:59:01] 2025-10-13 21:58:15,984 | INFO     | . get job = 0 s
[2025-10-13 23:59:01] 2025-10-13 21:58:15,984 | INFO     | . initial setup = 0 s
[2025-10-13 23:59:01] 2025-10-13 21:58:15,985 | INFO     | . payload setup = 2 s
[2025-10-13 23:59:01] 2025-10-13 21:58:15,985 | INFO     | . stage-in = 0 s
[2025-10-13 23:59:01] 2025-10-13 21:58:15,985 | INFO     | . payload execution = 4551 s
[2025-10-13 23:59:01] 2025-10-13 21:58:15,985 | INFO     | . stage-out = 0 s
[2025-10-13 23:59:01] 2025-10-13 21:58:15,985 | INFO     | . log creation = 0 s
[2025-10-13 23:59:01] 2025-10-13 21:58:15,985 | INFO     | ..............................
[2025-10-13 23:59:01] 2025-10-13 21:58:16,026 | INFO     | 
[2025-10-13 23:59:01] 2025-10-13 21:58:16,026 | INFO     | job summary report
[2025-10-13 23:59:01] 2025-10-13 21:58:16,026 | INFO     | --------------------------------------------------
[2025-10-13 23:59:01] 2025-10-13 21:58:16,026 | INFO     | PanDA job id: 6840749035
[2025-10-13 23:59:01] 2025-10-13 21:58:16,027 | INFO     | task id: 46676269
[2025-10-13 23:59:01] 2025-10-13 21:58:16,027 | INFO     | errors: (none)
[2025-10-13 23:59:01] 2025-10-13 21:58:16,027 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 23:59:01] 2025-10-13 21:58:16,027 | INFO     | pilot state: finished 
[2025-10-13 23:59:01] 2025-10-13 21:58:16,027 | INFO     | transexitcode: 0
[2025-10-13 23:59:01] 2025-10-13 21:58:16,027 | INFO     | exeerrorcode: 0
[2025-10-13 23:59:01] 2025-10-13 21:58:16,027 | INFO     | exeerrordiag: 
[2025-10-13 23:59:01] 2025-10-13 21:58:16,027 | INFO     | exitcode: 0
[2025-10-13 23:59:01] 2025-10-13 21:58:16,027 | INFO     | exitmsg: OK
[2025-10-13 23:59:01] 2025-10-13 21:58:16,027 | INFO     | cpuconsumptiontime: 17626 s
[2025-10-13 23:59:01] 2025-10-13 21:58:16,027 | INFO     | nevents: 400
[2025-10-13 23:59:01] 2025-10-13 21:58:16,027 | INFO     | neventsw: 0
[2025-10-13 23:59:01] 2025-10-13 21:58:16,027 | INFO     | pid: 569738
[2025-10-13 23:59:01] 2025-10-13 21:58:16,027 | INFO     | pgrp: 569738
[2025-10-13 23:59:01] 2025-10-13 21:58:16,027 | INFO     | corecount: 4
[2025-10-13 23:59:01] 2025-10-13 21:58:16,027 | INFO     | event service: False
[2025-10-13 23:59:01] 2025-10-13 21:58:16,027 | INFO     | sizes: {0: 2348857, 2: 2349119, 11: 2349147, 4557: 2375416, 4558: 2384469, 4559: 2384469, 4636: 2384791}
[2025-10-13 23:59:01] 2025-10-13 21:58:16,027 | INFO     | --------------------------------------------------
[2025-10-13 23:59:01] 2025-10-13 21:58:16,027 | INFO     | 
[2025-10-13 23:59:01] 2025-10-13 21:58:16,027 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | job 6840749035 has completed (purged errors)
[2025-10-13 23:59:01] 2025-10-13 21:58:16,044 | INFO     | overall cleanup function is called
[2025-10-13 23:59:01] 2025-10-13 21:58:17,048 | INFO     | --- collectZombieJob: --- 10, [569738]
[2025-10-13 23:59:01] 2025-10-13 21:58:17,049 | INFO     | zombie collector waiting for pid 569738
[2025-10-13 23:59:01] 2025-10-13 21:58:17,049 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 23:59:01] 2025-10-13 21:58:17,049 | INFO     | collected zombie processes
[2025-10-13 23:59:01] 2025-10-13 21:58:17,049 | INFO     | will attempt to kill all subprocesses of pid=569738
[2025-10-13 23:59:01] 2025-10-13 21:58:17,088 | INFO     | process IDs to be killed: [569738] (in reverse order)
[2025-10-13 23:59:01] 2025-10-13 21:58:17,114 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 23:59:01] 2025-10-13 21:58:17,114 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 23:59:01] 2025-10-13 21:58:17,115 | INFO     | did not find any defunct processes belonging to 569738
[2025-10-13 23:59:01] 2025-10-13 21:58:17,117 | INFO     | did not find any defunct processes belonging to 569738
[2025-10-13 23:59:01] 2025-10-13 21:58:17,117 | INFO     | ready for new job
[2025-10-13 23:59:01] 2025-10-13 21:58:17,117 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 23:59:01] 2025-10-13 21:58:17,118 | INFO     | ***************************************
[2025-10-13 23:59:01] 2025-10-13 21:58:17,118 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 23:59:01] 2025-10-13 21:58:17,118 | INFO     | ***************************************
[2025-10-13 23:59:01] 2025-10-13 21:58:17,118 | INFO     | 
[2025-10-13 23:59:01] 2025-10-13 21:58:17,119 | INFO     | architecture information:
[2025-10-13 23:59:01] 2025-10-13 21:58:17,119 | INFO     | executing command: cat /etc/os-release
[2025-10-13 23:59:01] 2025-10-13 21:58:17,126 | INFO     | cat /etc/os-release:
[2025-10-13 23:59:01] NAME="CentOS Linux"
[2025-10-13 23:59:01] VERSION="7 (Core)"
[2025-10-13 23:59:01] ID="centos"
[2025-10-13 23:59:01] ID_LIKE="rhel fedora"
[2025-10-13 23:59:01] VERSION_ID="7"
[2025-10-13 23:59:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 23:59:01] ANSI_COLOR="0;31"
[2025-10-13 23:59:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 23:59:01] HOME_URL="https://www.centos.org/"
[2025-10-13 23:59:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 23:59:01] 
[2025-10-13 23:59:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 23:59:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 23:59:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 23:59:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 23:59:01] 
[2025-10-13 23:59:01] 2025-10-13 21:58:17,127 | INFO     | ***************************************
[2025-10-13 23:59:01] 2025-10-13 21:58:17,629 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 23:59:01] 2025-10-13 21:58:17,638 | INFO     | sufficient remaining disk space (100838408192 B)
[2025-10-13 23:59:01] 2025-10-13 21:58:17,639 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 23:59:01] 2025-10-13 21:58:17,639 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 23:59:01] 2025-10-13 21:58:17,639 | INFO     | update_server=False
[2025-10-13 23:59:01] 2025-10-13 21:58:17,639 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 23:59:01] 2025-10-13 21:58:17,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 23:59:01] 2025-10-13 21:58:17,639 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 23:59:01] 2025-10-13 21:58:17,639 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 23:59:01] 2025-10-13 21:58:17,639 | INFO     | aborting loop
[2025-10-13 23:59:01] 2025-10-13 21:58:17,818 | INFO     | all data control threads have been joined
[2025-10-13 23:59:01] 2025-10-13 21:58:18,110 | INFO     | all payload control threads have been joined
[2025-10-13 23:59:01] 2025-10-13 21:58:18,145 | INFO     | all job control threads have been joined
[2025-10-13 23:59:01] 2025-10-13 21:58:18,642 | INFO     | [job] queue monitor thread has finished
[2025-10-13 23:59:01] 2025-10-13 21:58:18,642 | INFO     | [job] job monitor thread has finished
[2025-10-13 23:59:01] 2025-10-13 21:58:18,644 | INFO     | [job] retrieve thread has finished
[2025-10-13 23:59:01] 2025-10-13 21:58:18,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 23:59:01] 2025-10-13 21:58:18,732 | INFO     | [payload] validate_post thread has finished
[2025-10-13 23:59:01] 2025-10-13 21:58:18,822 | INFO     | [data] control thread has finished
[2025-10-13 23:59:01] 2025-10-13 21:58:18,856 | INFO     | [data] copytool_in thread has finished
[2025-10-13 23:59:01] 2025-10-13 21:58:19,115 | INFO     | [payload] control thread has finished
[2025-10-13 23:59:01] 2025-10-13 21:58:19,148 | INFO     | [job] control thread has finished
[2025-10-13 23:59:01] 2025-10-13 21:58:19,468 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 23:59:01] 2025-10-13 21:58:19,682 | INFO     | [job] validate thread has finished
[2025-10-13 23:59:01] 2025-10-13 21:58:19,752 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 23:59:01] 2025-10-13 21:58:19,782 | INFO     | [payload] failed_post thread has finished
[2025-10-13 23:59:01] 2025-10-13 21:58:19,845 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 23:59:01] 2025-10-13 21:58:19,850 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 23:59:01] 2025-10-13 21:58:20,712 | INFO     | [data] copytool_out thread has finished
[2025-10-13 23:59:01] 2025-10-13 21:58:21,642 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 23:59:01] 2025-10-13 21:58:47,778 | INFO     | PID=563309 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 23:59:01] 2025-10-13 21:58:47,779 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 23:59:01] 2025-10-13 21:58:47,779 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 23:59:01] 2025-10-13 21:58:47,779 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 23:59:01] 2025-10-13 21:58:54,925 | INFO     | [monitor] cgroup control has ended
[2025-10-13 23:59:01] 2025-10-13 21:58:56,345 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139997955065664)>', '<ExcThread(monitor, started 139997327906560)>']
[2025-10-13 23:59:01] 2025-10-13 21:58:56,815 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 23:59:01] 2025-10-13 21:58:56,815 | INFO     | [monitor] control thread has ended
[2025-10-13 23:59:01] 2025-10-13 21:59:01,368 | INFO     | all workflow threads have been joined
[2025-10-13 23:59:01] 2025-10-13 21:59:01,369 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 23:59:01] 2025-10-13 21:59:01,369 | INFO     | traces error code: 0
[2025-10-13 23:59:01] 2025-10-13 21:59:01,369 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 23:59:01] 2025-10-13 21:59:01,455 [wrapper] ==== pilot stdout END ====
[2025-10-13 23:59:01] 2025-10-13 21:59:01,456 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 23:59:01] 2025-10-13 21:59:01,458 [wrapper] pilotpid: 563309
[2025-10-13 23:59:01] 2025-10-13 21:59:01,459 [wrapper] Pilot exit status: 0
[2025-10-13 23:59:01] 2025-10-13 21:59:01,463 [wrapper] pandaids: 6840749035
[2025-10-13 23:59:01] 2025-10-13 21:59:01,480 [wrapper] cleanup supervisor_pilot  581367 563310
[2025-10-13 23:59:01] 2025-10-13 21:59:01,481 [wrapper] Test setup, not cleaning
[2025-10-13 23:59:01] 2025-10-13 21:59:01,482 [wrapper] apfmon messages muted
[2025-10-13 23:59:01] 2025-10-13 21:59:01,484 [wrapper] ==== wrapper stdout END ====
[2025-10-13 23:59:01] 2025-10-13 21:59:01,485 [wrapper] ==== wrapper stderr END ====
[2025-10-13 23:59:01]  *** Error codes and diagnostics ***
[2025-10-13 23:59:01]     "exeErrorCode": 0,
[2025-10-13 23:59:01]     "exeErrorDiag": "",
[2025-10-13 23:59:01]     "pilotErrorCode": 0,
[2025-10-13 23:59:01]     "pilotErrorDiag": "",
[2025-10-13 23:59:01]  *** Listing of results directory ***
[2025-10-13 23:59:01] insgesamt 407960
[2025-10-13 23:59:01] -rw-r--r-- 1 boinc boinc    557409 12. Okt 22:08 pilot3.tar.gz
[2025-10-13 23:59:01] -rwx------ 1 boinc boinc     36292 12. Okt 22:22 runpilot2-wrapper.sh
[2025-10-13 23:59:01] -rw-r--r-- 1 boinc boinc      5112 12. Okt 22:22 queuedata.json
[2025-10-13 23:59:01] -rw-r--r-- 1 boinc boinc       100 13. Okt 22:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 23:59:01] -rwxr-xr-x 1 boinc boinc      7986 13. Okt 22:40 run_atlas
[2025-10-13 23:59:01] -rw-r--r-- 1 boinc boinc       105 13. Okt 22:40 job.xml
[2025-10-13 23:59:01] -rw-r--r-- 2 boinc boinc     15120 13. Okt 22:40 start_atlas.sh
[2025-10-13 23:59:01] drwxrwx--x 2 boinc boinc      4096 13. Okt 22:40 shared
[2025-10-13 23:59:01] -rw-r--r-- 2 boinc boinc    569677 13. Okt 22:40 input.tar.gz
[2025-10-13 23:59:01] -rw-r--r-- 1 boinc boinc      9623 13. Okt 22:40 init_data.xml
[2025-10-13 23:59:01] -rw-r--r-- 2 boinc boinc 222009975 13. Okt 22:40 EVNT.46676267._004496.pool.root.1
[2025-10-13 23:59:01] -rw-r--r-- 1 boinc boinc         0 13. Okt 22:40 boinc_lockfile
[2025-10-13 23:59:01] -rw-r--r-- 1 boinc boinc      2550 13. Okt 22:40 pandaJob.out
[2025-10-13 23:59:01] -rw------- 1 boinc boinc    972799 13. Okt 22:40 agis_schedconf.cvmfs.json
[2025-10-13 23:59:01] -rw------- 1 boinc boinc   1560580 13. Okt 22:40 agis_ddmendpoints.agis.ALL.json
[2025-10-13 23:59:01] drwx------ 5 boinc boinc      4096 13. Okt 22:40 pilot3
[2025-10-13 23:59:01] -rw------- 1 boinc boinc 189950091 13. Okt 23:56 HITS.46676269._088601.pool.root.1
[2025-10-13 23:59:01] -rw------- 1 boinc boinc      1017 13. Okt 23:56 memory_monitor_summary.json
[2025-10-13 23:59:01] -rw-r--r-- 1 boinc boinc       529 13. Okt 23:56 boinc_task_state.xml
[2025-10-13 23:59:01] -rw------- 1 boinc boinc    265992 13. Okt 23:56 log.46676269._088601.job.log.tgz.1
[2025-10-13 23:59:01] -rw------- 1 boinc boinc        95 13. Okt 23:58 pilot_heartbeat.json
[2025-10-13 23:59:01] -rw------- 1 boinc boinc      7758 13. Okt 23:58 heartbeat.json
[2025-10-13 23:59:01] -rw-r--r-- 1 boinc boinc      8192 13. Okt 23:58 boinc_mmap_file
[2025-10-13 23:59:01] -rw-r--r-- 1 boinc boinc        27 13. Okt 23:58 wrapper_checkpoint.txt
[2025-10-13 23:59:01] -rw------- 1 boinc boinc      4748 13. Okt 23:59 pilotlog.txt
[2025-10-13 23:59:01] -rw------- 1 boinc boinc    679816 13. Okt 23:59 log.46676269._088601.job.log.1
[2025-10-13 23:59:01] -rw------- 1 boinc boinc       357 13. Okt 23:59 output.list
[2025-10-13 23:59:01] -rw-r--r-- 1 boinc boinc       620 13. Okt 23:59 runtime_log
[2025-10-13 23:59:01] -rw------- 1 boinc boinc    962560 13. Okt 23:59 result.tar.gz
[2025-10-13 23:59:01] -rw------- 1 boinc boinc       641 13. Okt 23:59 VFHKDmvlHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwQlNDmFu6ypm.diag
[2025-10-13 23:59:01] -rw-r--r-- 1 boinc boinc      8663 13. Okt 23:59 runtime_log.err
[2025-10-13 23:59:01] -rw-r--r-- 1 boinc boinc     22002 13. Okt 23:59 stderr.txt
[2025-10-13 23:59:01] HITS file was successfully produced:
[2025-10-13 23:59:01] -rw------- 1 boinc boinc 189950091 13. Okt 23:56 shared/HITS.pool.root.1
[2025-10-13 23:59:01]  *** Contents of shared directory: ***
[2025-10-13 23:59:01] insgesamt 403832
[2025-10-13 23:59:01] -rw-r--r-- 2 boinc boinc     15120 13. Okt 22:40 start_atlas.sh
[2025-10-13 23:59:01] -rw-r--r-- 2 boinc boinc    569677 13. Okt 22:40 input.tar.gz
[2025-10-13 23:59:01] -rw-r--r-- 2 boinc boinc 222009975 13. Okt 22:40 ATLAS.root_0
[2025-10-13 23:59:01] -rw------- 1 boinc boinc 189950091 13. Okt 23:56 HITS.pool.root.1
[2025-10-13 23:59:01] -rw------- 1 boinc boinc    962560 13. Okt 23:59 result.tar.gz
23:59:02 (559597): run_atlas exited; CPU time 17650.017627
23:59:02 (559597): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN