Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:23:23 (29634): wrapper (7.7.26015): starting
20:23:23 (29634): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 20:23:23] Arguments: --nthreads 12
[2025-10-12 20:23:23] Threads: 12
[2025-10-12 20:23:23] Checking for CVMFS
[2025-10-12 20:23:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:23:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:23:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:23:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:23:23] 2.11.2.0 30551 53538 88040 151642 1 56 14821162 20275201 1 130560 0 31196696 99.958 2420211 39855 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 20:23:23] CVMFS is ok
[2025-10-12 20:23:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:23:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:23:23] Further information can be found at the LHC@home message board.
[2025-10-12 20:23:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:23:23] Checking for apptainer binary...
[2025-10-12 20:23:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:23:23] Running /usr/bin/apptainer --version
[2025-10-12 20:23:23] apptainer version 1.3.2-1.el7
[2025-10-12 20:23:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:23:25] c-205-16.aglt2.org
[2025-10-12 20:23:25] apptainer works
[2025-10-12 20:23:25] Set ATHENA_PROC_NUMBER=12
[2025-10-12 20:23:25] Set ATHENA_CORE_NUMBER=12
[2025-10-12 20:23:25] Starting ATLAS job with PandaID=6840714590
[2025-10-12 20:23:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:36:52]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:36:52]  scope=mc23_13p6TeV
[2025-10-12 21:36:52]  status=None
[2025-10-12 21:36:52]  status_code=0
[2025-10-12 21:36:52]  storage_token=
[2025-10-12 21:36:52]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840714590/log.46676269._087986.job.log.tgz.1
[2025-10-12 21:36:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/80/log.46676269._087986.job.log.tgz.1
[2025-10-12 21:36:52]  workdir=None
[2025-10-12 21:36:52] ]
[2025-10-12 21:36:52] 2025-10-13 01:35:54,339 | INFO     | transferring file log.46676269._087986.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840714590/log.46676269._087986.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 21:36:52] 2025-10-13 01:35:54,339 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840714590/log.46676269._087986.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._087986.job
[2025-10-12 21:36:52] 2025-10-13 01:35:54,362 | INFO     | adding to output.list: log.46676269._087986.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/80/log.46676269._087986.job.log.tg
[2025-10-12 21:36:52] 2025-10-13 01:35:54,363 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 21:36:52] 2025-10-13 01:35:54,363 | INFO     | summary of transferred files:
[2025-10-12 21:36:52] 2025-10-13 01:35:54,363 | INFO     |  -- lfn=log.46676269._087986.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 21:36:52] 2025-10-13 01:35:54,363 | INFO     | stage-out finished correctly
[2025-10-12 21:36:52] 2025-10-13 01:35:54,495 | INFO     | monitor loop #324: job 0:6840714590 is in state 'finished'
[2025-10-12 21:36:52] 2025-10-13 01:35:54,495 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:36:52] 2025-10-13 01:35:55,742 | INFO     | time since job start (4335s) is within the limit (172800.0s)
[2025-10-12 21:36:52] 2025-10-13 01:35:56,195 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 21:36:52] 2025-10-13 01:35:56,999 | INFO     | monitor loop #325: job 0:6840714590 is in state 'finished'
[2025-10-12 21:36:52] 2025-10-13 01:35:56,999 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:36:52] 2025-10-13 01:35:57,747 | INFO     | time since job start (4337s) is within the limit (172800.0s)
[2025-10-12 21:36:52] 2025-10-13 01:35:58,252 | INFO     | job 6840714590 has state=finished
[2025-10-12 21:36:52] 2025-10-13 01:35:58,252 | INFO     | preparing for final server update for job 6840714590 in state='finished'
[2025-10-12 21:36:52] 2025-10-13 01:35:58,253 | INFO     | this job has now completed (state=finished)
[2025-10-12 21:36:52] 2025-10-13 01:35:58,253 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 21:36:52] 2025-10-13 01:35:58,253 | INFO     | log transfer has been attempted: DONE
[2025-10-12 21:36:52] 2025-10-13 01:35:58,253 | INFO     | job 6840714590 has finished - writing final server update
[2025-10-12 21:36:52] 2025-10-13 01:35:58,253 | INFO     | total number of processed events: 400 (read)
[2025-10-12 21:36:52] 2025-10-13 01:35:58,256 | INFO     | executing command: lscpu
[2025-10-12 21:36:52] 2025-10-13 01:35:58,287 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 21:36:52] 2025-10-13 01:35:59,502 | INFO     | monitor loop #326: job 0:6840714590 is in state 'finished'
[2025-10-12 21:36:52] 2025-10-13 01:35:59,502 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:36:52] 2025-10-13 01:35:59,753 | INFO     | time since job start (4339s) is within the limit (172800.0s)
[2025-10-12 21:36:52] 2025-10-13 01:36:01,759 | INFO     | time since job start (4341s) is within the limit (172800.0s)
[2025-10-12 21:36:52] 2025-10-13 01:36:02,005 | INFO     | monitor loop #327: job 0:6840714590 is in state 'finished'
[2025-10-12 21:36:52] 2025-10-13 01:36:02,005 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:36:52] 2025-10-13 01:36:03,075 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 21:36:52] 2025-10-13 01:36:03,079 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.4166666666667
[2025-10-12 21:36:52] 2025-10-13 01:36:03,082 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840714590/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:36:52] 2025-10-13 01:36:03,083 | INFO     | extracted standard info from prmon json
[2025-10-12 21:36:52] 2025-10-13 01:36:03,083 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 21:36:52] 2025-10-13 01:36:03,083 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:36:52] 2025-10-13 01:36:03,084 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:36:52] 2025-10-13 01:36:03,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:36:52] 2025-10-13 01:36:03,086 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:36:52] 2025-10-13 01:36:03,087 | INFO     | sum of square deviations: 81266640.0
[2025-10-12 21:36:52] 2025-10-13 01:36:03,087 | INFO     | sum of deviations: -2181851172.0
[2025-10-12 21:36:52] 2025-10-13 01:36:03,087 | INFO     | mean x: 1760317275.5
[2025-10-12 21:36:52] 2025-10-13 01:36:03,087 | INFO     | mean y: 2852147.125
[2025-10-12 21:36:52] 2025-10-13 01:36:03,088 | INFO     | -- intersect: 47263946129.12698
[2025-10-12 21:36:52] 2025-10-13 01:36:03,088 | INFO     | intersect: 47263946129.12698
[2025-10-12 21:36:52] 2025-10-13 01:36:03,088 | INFO     | chi2: 0.20625796000974822
[2025-10-12 21:36:52] 2025-10-13 01:36:03,088 | INFO     | -- intersect: 47263946129.12698
[2025-10-12 21:36:52] 2025-10-13 01:36:03,089 | INFO     | current memory leak: -26.85 B/s (using 64 data points, chi2=0.21)
[2025-10-12 21:36:52] 2025-10-13 01:36:03,089 | INFO     | could have reported an average CPU frequency of 2056 MHz (6 samples)
[2025-10-12 21:36:52] 2025-10-13 01:36:03,089 | INFO     | ..............................
[2025-10-12 21:36:52] 2025-10-13 01:36:03,089 | INFO     | . Timing measurements:
[2025-10-12 21:36:52] 2025-10-13 01:36:03,090 | INFO     | . get job = 0 s
[2025-10-12 21:36:52] 2025-10-13 01:36:03,090 | INFO     | . initial setup = 2 s
[2025-10-12 21:36:52] 2025-10-13 01:36:03,090 | INFO     | . payload setup = 7 s
[2025-10-12 21:36:52] 2025-10-13 01:36:03,090 | INFO     | . stage-in = 0 s
[2025-10-12 21:36:52] 2025-10-13 01:36:03,090 | INFO     | . payload execution = 4306 s
[2025-10-12 21:36:52] 2025-10-13 01:36:03,090 | INFO     | . stage-out = 0 s
[2025-10-12 21:36:52] 2025-10-13 01:36:03,091 | INFO     | . log creation = 0 s
[2025-10-12 21:36:52] 2025-10-13 01:36:03,091 | INFO     | ..............................
[2025-10-12 21:36:52] 2025-10-13 01:36:03,174 | INFO     | 
[2025-10-12 21:36:52] 2025-10-13 01:36:03,174 | INFO     | job summary report
[2025-10-12 21:36:52] 2025-10-13 01:36:03,174 | INFO     | --------------------------------------------------
[2025-10-12 21:36:52] 2025-10-13 01:36:03,174 | INFO     | PanDA job id: 6840714590
[2025-10-12 21:36:52] 2025-10-13 01:36:03,174 | INFO     | task id: 46676269
[2025-10-12 21:36:52] 2025-10-13 01:36:03,175 | INFO     | errors: (none)
[2025-10-12 21:36:52] 2025-10-13 01:36:03,175 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:36:52] 2025-10-13 01:36:03,175 | INFO     | pilot state: finished 
[2025-10-12 21:36:52] 2025-10-13 01:36:03,175 | INFO     | transexitcode: 0
[2025-10-12 21:36:52] 2025-10-13 01:36:03,175 | INFO     | exeerrorcode: 0
[2025-10-12 21:36:52] 2025-10-13 01:36:03,175 | INFO     | exeerrordiag: 
[2025-10-12 21:36:52] 2025-10-13 01:36:03,175 | INFO     | exitcode: 0
[2025-10-12 21:36:52] 2025-10-13 01:36:03,176 | INFO     | exitmsg: OK
[2025-10-12 21:36:52] 2025-10-13 01:36:03,176 | INFO     | cpuconsumptiontime: 44690 s
[2025-10-12 21:36:52] 2025-10-13 01:36:03,176 | INFO     | nevents: 400
[2025-10-12 21:36:52] 2025-10-13 01:36:03,176 | INFO     | neventsw: 0
[2025-10-12 21:36:52] 2025-10-13 01:36:03,176 | INFO     | pid: 8526
[2025-10-12 21:36:52] 2025-10-13 01:36:03,176 | INFO     | pgrp: 8526
[2025-10-12 21:36:52] 2025-10-13 01:36:03,177 | INFO     | corecount: 12
[2025-10-12 21:36:52] 2025-10-13 01:36:03,177 | INFO     | event service: False
[2025-10-12 21:36:52] 2025-10-13 01:36:03,177 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4317: 2375195, 4318: 2384193, 4319: 2384249, 4326: 2384571}
[2025-10-12 21:36:52] 2025-10-13 01:36:03,177 | INFO     | --------------------------------------------------
[2025-10-12 21:36:52] 2025-10-13 01:36:03,177 | INFO     | 
[2025-10-12 21:36:52] 2025-10-13 01:36:03,178 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 21:36:52] 2025-10-13 01:36:03,202 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:36:52] 2025-10-13 01:36:03,203 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:36:52] 2025-10-13 01:36:03,203 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:36:52] 2025-10-13 01:36:03,203 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:36:52] 2025-10-13 01:36:03,203 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:36:52] 2025-10-13 01:36:03,203 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:36:52] 2025-10-13 01:36:03,204 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:36:52] 2025-10-13 01:36:03,204 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:36:52] 2025-10-13 01:36:03,204 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:36:52] 2025-10-13 01:36:03,204 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:36:52] 2025-10-13 01:36:03,204 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:36:52] 2025-10-13 01:36:03,204 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:36:52] 2025-10-13 01:36:03,204 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:36:52] 2025-10-13 01:36:03,205 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:36:52] 2025-10-13 01:36:03,205 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:36:52] 2025-10-13 01:36:03,205 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:36:52] 2025-10-13 01:36:03,205 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:36:52] 2025-10-13 01:36:03,205 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:36:52] 2025-10-13 01:36:03,205 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:36:52] 2025-10-13 01:36:03,206 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:36:52] 2025-10-13 01:36:03,206 | INFO     | job 6840714590 has completed (purged errors)
[2025-10-12 21:36:52] 2025-10-13 01:36:03,206 | INFO     | overall cleanup function is called
[2025-10-12 21:36:52] 2025-10-13 01:36:04,214 | INFO     | --- collectZombieJob: --- 10, [8526]
[2025-10-12 21:36:52] 2025-10-13 01:36:04,214 | INFO     | zombie collector waiting for pid 8526
[2025-10-12 21:36:52] 2025-10-13 01:36:04,214 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:36:52] 2025-10-13 01:36:04,215 | INFO     | collected zombie processes
[2025-10-12 21:36:52] 2025-10-13 01:36:04,215 | INFO     | will attempt to kill all subprocesses of pid=8526
[2025-10-12 21:36:52] 2025-10-13 01:36:04,309 | INFO     | process IDs to be killed: [8526] (in reverse order)
[2025-10-12 21:36:52] 2025-10-13 01:36:04,362 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:36:52] 2025-10-13 01:36:04,363 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:36:52] 2025-10-13 01:36:04,366 | INFO     | did not find any defunct processes belonging to 8526
[2025-10-12 21:36:52] 2025-10-13 01:36:04,369 | INFO     | did not find any defunct processes belonging to 8526
[2025-10-12 21:36:52] 2025-10-13 01:36:04,369 | INFO     | ready for new job
[2025-10-12 21:36:52] 2025-10-13 01:36:04,369 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:36:52] 2025-10-13 01:36:04,371 | INFO     | ***************************************
[2025-10-12 21:36:52] 2025-10-13 01:36:04,371 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:36:52] 2025-10-13 01:36:04,371 | INFO     | ***************************************
[2025-10-12 21:36:52] 2025-10-13 01:36:04,371 | INFO     | 
[2025-10-12 21:36:52] 2025-10-13 01:36:04,372 | INFO     | architecture information:
[2025-10-12 21:36:52] 2025-10-13 01:36:04,372 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:36:52] 2025-10-13 01:36:04,389 | INFO     | cat /etc/os-release:
[2025-10-12 21:36:52] NAME="CentOS Linux"
[2025-10-12 21:36:52] VERSION="7 (Core)"
[2025-10-12 21:36:52] ID="centos"
[2025-10-12 21:36:52] ID_LIKE="rhel fedora"
[2025-10-12 21:36:52] VERSION_ID="7"
[2025-10-12 21:36:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:36:52] ANSI_COLOR="0;31"
[2025-10-12 21:36:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:36:52] HOME_URL="https://www.centos.org/"
[2025-10-12 21:36:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:36:52] 
[2025-10-12 21:36:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:36:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:36:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:36:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:36:52] 
[2025-10-12 21:36:52] 2025-10-13 01:36:04,389 | INFO     | ***************************************
[2025-10-12 21:36:52] 2025-10-13 01:36:04,892 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 21:36:52] 2025-10-13 01:36:04,910 | INFO     | sufficient remaining disk space (29505880064 B)
[2025-10-12 21:36:52] 2025-10-13 01:36:04,911 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:36:52] 2025-10-13 01:36:04,911 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:36:52] 2025-10-13 01:36:04,911 | INFO     | update_server=False
[2025-10-12 21:36:52] 2025-10-13 01:36:04,911 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:36:52] 2025-10-13 01:36:04,912 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:36:52] 2025-10-13 01:36:04,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:36:52] 2025-10-13 01:36:05,408 | INFO     | all data control threads have been joined
[2025-10-12 21:36:52] 2025-10-13 01:36:05,513 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:36:52] 2025-10-13 01:36:05,513 | INFO     | aborting loop
[2025-10-12 21:36:52] 2025-10-13 01:36:05,688 | INFO     | all payload control threads have been joined
[2025-10-12 21:36:52] 2025-10-13 01:36:05,855 | INFO     | all job control threads have been joined
[2025-10-12 21:36:52] 2025-10-13 01:36:05,917 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:36:52] 2025-10-13 01:36:05,917 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:36:52] 2025-10-13 01:36:05,921 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:36:52] 2025-10-13 01:36:06,414 | INFO     | [data] control thread has finished
[2025-10-12 21:36:52] 2025-10-13 01:36:06,518 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:36:52] 2025-10-13 01:36:06,534 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:36:52] 2025-10-13 01:36:06,642 | INFO     | [job] validate thread has finished
[2025-10-12 21:36:52] 2025-10-13 01:36:06,694 | INFO     | [payload] control thread has finished
[2025-10-12 21:36:52] 2025-10-13 01:36:06,783 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:36:52] 2025-10-13 01:36:06,860 | INFO     | [job] control thread has finished
[2025-10-12 21:36:52] 2025-10-13 01:36:06,893 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:36:52] 2025-10-13 01:36:06,967 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:36:52] 2025-10-13 01:36:07,007 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:36:52] 2025-10-13 01:36:07,018 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:36:52] 2025-10-13 01:36:07,254 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:36:52] 2025-10-13 01:36:07,437 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:36:52] 2025-10-13 01:36:10,789 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:36:52] 2025-10-13 01:36:34,960 | INFO     | PID=871 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-10-12 21:36:52] 2025-10-13 01:36:34,960 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:36:52] 2025-10-13 01:36:34,960 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:36:52] 2025-10-13 01:36:34,960 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:36:52] 2025-10-13 01:36:46,682 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:36:52] 2025-10-13 01:36:47,321 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139662320641856)>', '<ExcThread(monitor, started 139662018451200)>']
[2025-10-12 21:36:52] 2025-10-13 01:36:48,019 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:36:52] 2025-10-13 01:36:48,020 | INFO     | [monitor] control thread has ended
[2025-10-12 21:36:52] 2025-10-13 01:36:52,355 | INFO     | all workflow threads have been joined
[2025-10-12 21:36:52] 2025-10-13 01:36:52,355 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:36:52] 2025-10-13 01:36:52,363 | INFO     | traces error code: 0
[2025-10-12 21:36:52] 2025-10-13 01:36:52,363 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:36:52] 2025-10-13 01:36:52,461 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:36:52] 2025-10-13 01:36:52,465 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:36:52] 2025-10-13 01:36:52,469 [wrapper] pilotpid: 871
[2025-10-12 21:36:52] 2025-10-13 01:36:52,473 [wrapper] Pilot exit status: 0
[2025-10-12 21:36:52] 2025-10-13 01:36:52,489 [wrapper] pandaids: 6840714590
[2025-10-12 21:36:52] 2025-10-13 01:36:52,532 [wrapper] cleanup supervisor_pilot 24027 872
[2025-10-12 21:36:52] 2025-10-13 01:36:52,536 [wrapper] Test setup, not cleaning
[2025-10-12 21:36:52] 2025-10-13 01:36:52,540 [wrapper] apfmon messages muted
[2025-10-12 21:36:52] 2025-10-13 01:36:52,544 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:36:52] 2025-10-13 01:36:52,548 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:36:52]  *** Error codes and diagnostics ***
[2025-10-12 21:36:52]     "exeErrorCode": 0,
[2025-10-12 21:36:52]     "exeErrorDiag": "",
[2025-10-12 21:36:52]     "pilotErrorCode": 0,
[2025-10-12 21:36:52]     "pilotErrorDiag": "",
[2025-10-12 21:36:52]  *** Listing of results directory ***
[2025-10-12 21:36:52] total 407396
[2025-10-12 21:36:52] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 15:50 pilot3.tar.gz
[2025-10-12 21:36:52] -rwx------ 1 boincer umatlas     36292 Oct 12 15:54 runpilot2-wrapper.sh
[2025-10-12 21:36:52] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 15:54 queuedata.json
[2025-10-12 21:36:52] -rw-r--r-- 1 boincer umatlas       100 Oct 12 20:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:36:52] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 20:23 run_atlas
[2025-10-12 21:36:52] -rw-r--r-- 1 boincer umatlas       105 Oct 12 20:23 job.xml
[2025-10-12 21:36:52] -rw-r--r-- 2 boincer umatlas 219405438 Oct 12 20:23 EVNT.46676267._004474.pool.root.1
[2025-10-12 21:36:52] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:23 start_atlas.sh
[2025-10-12 21:36:52] drwxrwx--x 2 boincer umatlas      4096 Oct 12 20:23 shared
[2025-10-12 21:36:52] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 20:23 input.tar.gz
[2025-10-12 21:36:52] -rw-r--r-- 1 boincer umatlas         0 Oct 12 20:23 boinc_lockfile
[2025-10-12 21:36:52] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 20:23 pandaJob.out
[2025-10-12 21:36:52] -rw------- 1 boincer umatlas    975603 Oct 12 20:23 agis_schedconf.cvmfs.json
[2025-10-12 21:36:52] -rw------- 1 boincer umatlas   1560580 Oct 12 20:23 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:36:52] drwx------ 5 boincer umatlas      4096 Oct 12 20:23 pilot3
[2025-10-12 21:36:52] -rw------- 1 boincer umatlas 191861260 Oct 12 21:35 HITS.46676269._087986.pool.root.1
[2025-10-12 21:36:52] -rw------- 1 boincer umatlas        95 Oct 12 21:35 pilot_heartbeat.json
[2025-10-12 21:36:52] -rw-r--r-- 1 boincer umatlas       529 Oct 12 21:35 boinc_task_state.xml
[2025-10-12 21:36:52] -rw------- 1 boincer umatlas      1050 Oct 12 21:35 memory_monitor_summary.json
[2025-10-12 21:36:52] -rw------- 1 boincer umatlas    371596 Oct 12 21:35 log.46676269._087986.job.log.tgz.1
[2025-10-12 21:36:52] -rw------- 1 boincer umatlas      7859 Oct 12 21:36 heartbeat.json
[2025-10-12 21:36:52] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 21:36 init_data.xml
[2025-10-12 21:36:52] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 21:36 boinc_mmap_file
[2025-10-12 21:36:52] -rw-r--r-- 1 boincer umatlas        27 Oct 12 21:36 wrapper_checkpoint.txt
[2025-10-12 21:36:52] -rw------- 1 boincer umatlas      4744 Oct 12 21:36 pilotlog.txt
[2025-10-12 21:36:52] -rw------- 1 boincer umatlas    631012 Oct 12 21:36 log.46676269._087986.job.log.1
[2025-10-12 21:36:52] -rw------- 1 boincer umatlas       357 Oct 12 21:36 output.list
[2025-10-12 21:36:52] -rw-r--r-- 1 boincer umatlas       620 Oct 12 21:36 runtime_log
[2025-10-12 21:36:52] -rw------- 1 boincer umatlas   1024000 Oct 12 21:36 result.tar.gz
[2025-10-12 21:36:52] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 21:36 runtime_log.err
[2025-10-12 21:36:52] -rw------- 1 boincer umatlas       659 Oct 12 21:36 3WHNDmwJHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFMlNDmXDnjZm.diag
[2025-10-12 21:36:52] -rw-r--r-- 1 boincer umatlas     21919 Oct 12 21:36 stderr.txt
[2025-10-12 21:36:52] HITS file was successfully produced:
[2025-10-12 21:36:52] -rw------- 1 boincer umatlas 191861260 Oct 12 21:35 shared/HITS.pool.root.1
[2025-10-12 21:36:52]  *** Contents of shared directory: ***
[2025-10-12 21:36:52] total 403208
[2025-10-12 21:36:52] -rw-r--r-- 2 boincer umatlas 219405438 Oct 12 20:23 ATLAS.root_0
[2025-10-12 21:36:52] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:23 start_atlas.sh
[2025-10-12 21:36:52] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 20:23 input.tar.gz
[2025-10-12 21:36:52] -rw------- 1 boincer umatlas 191861260 Oct 12 21:35 HITS.pool.root.1
[2025-10-12 21:36:52] -rw------- 1 boincer umatlas   1024000 Oct 12 21:36 result.tar.gz
21:36:54 (29634): run_atlas exited; CPU time 44667.308396
21:36:54 (29634): called boinc_finish(0)

</stderr_txt>
]]>

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