Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:30:54 (3588337): wrapper (7.7.26015): starting
17:30:54 (3588337): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 17:30:54] Arguments: --nthreads 8
[2025-10-12 17:30:54] Threads: 8
[2025-10-12 17:30:54] Checking for CVMFS
[2025-10-12 17:30:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:30:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:30:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:30:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:30:55] 2.11.3.0 2070 31849 183624 151642 1 195 41183909 45568001 17299 130560 0 210199838 99.872 80215104 24985 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 17:30:55] CVMFS is ok
[2025-10-12 17:30:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:30:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:30:55] Further information can be found at the LHC@home message board.
[2025-10-12 17:30:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:30:55] Checking for apptainer binary...
[2025-10-12 17:30:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:30:55] Running /usr/bin/apptainer --version
[2025-10-12 17:30:55] apptainer version 1.4.1-1.el9
[2025-10-12 17:30:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:30:56] wns0013.triumf.lcg
[2025-10-12 17:30:56] apptainer works
[2025-10-12 17:30:56] Set ATHENA_PROC_NUMBER=8
[2025-10-12 17:30:56] Set ATHENA_CORE_NUMBER=8
[2025-10-12 17:30:56] Starting ATLAS job with PandaID=6840749846
[2025-10-12 17:30:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:37:42]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:37:42] 2025-10-13 00:36:49,259 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:37:42] 2025-10-13 00:36:49,259 | WARNING  | wrong length of table data, x=[1760315588.0, 1760315649.0], y=[1094.0, 611456.0] (must be same and length>=4)
[2025-10-12 17:37:42] 2025-10-13 00:36:49,259 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 17:37:42] 2025-10-13 00:36:49,260 | INFO     | ..............................
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . Timing measurements:
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . get job = 0 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . initial setup = 5 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . payload setup = 29 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . stage-in = 0 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . payload execution = 96 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . stage-out = 1 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . log creation = 0 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | ..............................
[2025-10-12 17:37:42] 2025-10-13 00:36:49,281 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 17:37:42] 2025-10-13 00:36:49,281 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840749846/pilotlog.txt
[2025-10-12 17:37:42] 2025-10-13 00:36:49,348 | INFO     | monitor loop #81: job 0:6840749846 is in state 'failed'
[2025-10-12 17:37:42] 2025-10-13 00:36:49,348 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-12 17:37:42] 2025-10-13 00:36:49,364 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 17:37:42] - Log from pilotlog.txt -
[2025-10-12 17:37:42] 2025-10-13 00:36:49,258 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:37:42] 2025-10-13 00:36:49,259 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:37:42] 2025-10-13 00:36:49,259 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:37:42] 2025-10-13 00:36:49,259 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:37:42] 2025-10-13 00:36:49,259 | WARNING  | wrong length of table data, x=[1760315588.0, 1760315649.0], y=[1094.0, 611456.0] (must be same and length>=4)
[2025-10-12 17:37:42] 2025-10-13 00:36:49,259 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 17:37:42] 2025-10-13 00:36:49,260 | INFO     | ..............................
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . Timing measurements:
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . get job = 0 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . initial setup = 5 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . payload setup = 29 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . stage-in = 0 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . payload execution = 96 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . stage-out = 1 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . log creation = 0 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | ..............................
[2025-10-12 17:37:42] 2025-10-13 00:36:49,281 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 17:37:42] 2025-10-13 00:36:49,281 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840749846/pilotlog.txt
[2025-10-12 17:37:42] 2025-10-13 00:36:49,348 | INFO     | monitor loop #81: job 0:6840749846 is in state 'failed'
[2025-10-12 17:37:42] 2025-10-13 00:36:49,348 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-12 17:37:42] 2025-10-13 00:36:49,364 | WARNING  | 
[2025-10-12 17:37:42] [begin log extracts]
[2025-10-12 17:37:42] - Log from pilotlog.txt -
[2025-10-12 17:37:42] 2025-10-13 00:36:49,258 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:37:42] 2025-10-13 00:36:49,259 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:37:42] 2025-10-13 00:36:49,259 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:37:42] 2025-10-13 00:36:49,259 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:37:42] 2025-10-13 00:36:49,259 | WARNING  | wrong length of table data, x=[1760315588.0, 1760315649.0], y=[1094.0, 611456.0] (must be same and length>=4)
[2025-10-12 17:37:42] 2025-10-13 00:36:49,259 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-12 17:37:42] 2025-10-13 00:36:49,260 | INFO     | ..............................
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . Timing measurements:
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . get job = 0 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . initial setup = 5 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . payload setup = 29 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . stage-in = 0 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . payload execution = 96 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . stage-out = 1 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | . log creation = 0 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,280 | INFO     | ..............................
[2025-10-12 17:37:42] 2025-10-13 00:36:49,281 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 17:37:42] 2025-10-13 00:36:49,281 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6840749846/pilotlog.txt
[2025-10-12 17:37:42] 2025-10-13 00:36:49,348 | INFO     | monitor loop #81: job 0:6840749846 is in state 'failed'
[2025-10-12 17:37:42] 2025-10-13 00:36:49,348 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-12 17:37:42] [end log extracts]
[2025-10-12 17:37:42] 2025-10-13 00:36:49,365 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 17:37:42] 2025-10-13 00:36:49,365 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 17:37:42] 2025-10-13 00:36:49,521 | INFO     | 
[2025-10-12 17:37:42] 2025-10-13 00:36:49,522 | INFO     | job summary report
[2025-10-12 17:37:42] 2025-10-13 00:36:49,522 | INFO     | --------------------------------------------------
[2025-10-12 17:37:42] 2025-10-13 00:36:49,523 | INFO     | PanDA job id: 6840749846
[2025-10-12 17:37:42] 2025-10-13 00:36:49,523 | INFO     | task id: 46676269
[2025-10-12 17:37:42] 2025-10-13 00:36:49,523 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 17:34:13,900 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 17:37:42] 2025-10-13 00:36:49,523 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:37:42] 2025-10-13 00:36:49,524 | INFO     | pilot state: failed 
[2025-10-12 17:37:42] 2025-10-13 00:36:49,524 | INFO     | transexitcode: 65
[2025-10-12 17:37:42] 2025-10-13 00:36:49,524 | INFO     | exeerrorcode: 65
[2025-10-12 17:37:42] 2025-10-13 00:36:49,524 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 17:37:42] 2025-10-13 00:36:49,524 | INFO     | exitcode: 65
[2025-10-12 17:37:42] 2025-10-13 00:36:49,524 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 17:37:42] 2025-10-13 00:36:49,524 | INFO     | cpuconsumptiontime: 21 s
[2025-10-12 17:37:42] 2025-10-13 00:36:49,524 | INFO     | nevents: 0
[2025-10-12 17:37:42] 2025-10-13 00:36:49,524 | INFO     | neventsw: 0
[2025-10-12 17:37:42] 2025-10-13 00:36:49,524 | INFO     | pid: 3599160
[2025-10-12 17:37:42] 2025-10-13 00:36:49,524 | INFO     | pgrp: 3599160
[2025-10-12 17:37:42] 2025-10-13 00:36:49,524 | INFO     | corecount: 8
[2025-10-12 17:37:42] 2025-10-13 00:36:49,524 | INFO     | event service: False
[2025-10-12 17:37:42] 2025-10-13 00:36:49,524 | INFO     | sizes: {0: 2348627, 1: 2348882, 2: 2348882, 12: 2348910, 20: 2349200, 23: 2349228, 129: 2372710, 132: 2377002, 133: 2377030, 272: 2377224}
[2025-10-12 17:37:42] 2025-10-13 00:36:49,524 | INFO     | --------------------------------------------------
[2025-10-12 17:37:42] 2025-10-13 00:36:49,525 | INFO     | 
[2025-10-12 17:37:42] 2025-10-13 00:36:49,525 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 17:37:42] 2025-10-13 00:36:49,637 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-13 00:36:49,643 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-13 00:36:49,643 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-13 00:36:49,643 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-13 00:36:49,643 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-13 00:36:49,643 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-13 00:36:49,643 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-13 00:36:49,643 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-13 00:36:49,643 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-13 00:36:49,643 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-13 00:36:49,646 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-13 00:36:49,646 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-13 00:36:49,646 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-13 00:36:49,646 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-13 00:36:49,646 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-13 00:36:49,646 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-13 00:36:49,647 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-13 00:36:49,647 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:37:42] 2025-10-13 00:36:49,647 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-13 00:36:49,647 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:37:42] 2025-10-13 00:36:49,647 | INFO     | job 6840749846 has completed (purged errors)
[2025-10-12 17:37:42] 2025-10-13 00:36:49,647 | INFO     | overall cleanup function is called
[2025-10-12 17:37:42] 2025-10-13 00:36:50,664 | INFO     | --- collectZombieJob: --- 10, [3599160]
[2025-10-12 17:37:42] 2025-10-13 00:36:50,664 | INFO     | zombie collector waiting for pid 3599160
[2025-10-12 17:37:42] 2025-10-13 00:36:50,664 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:37:42] 2025-10-13 00:36:50,664 | INFO     | collected zombie processes
[2025-10-12 17:37:42] 2025-10-13 00:36:50,664 | INFO     | will attempt to kill all subprocesses of pid=3599160
[2025-10-12 17:37:42] 2025-10-13 00:36:51,333 | INFO     | process IDs to be killed: [3599160] (in reverse order)
[2025-10-12 17:37:42] 2025-10-13 00:36:51,424 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:37:42] 2025-10-13 00:36:51,424 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:37:42] 2025-10-13 00:36:51,433 | INFO     | did not find any defunct processes belonging to 3599160
[2025-10-12 17:37:42] 2025-10-13 00:36:51,442 | INFO     | did not find any defunct processes belonging to 3599160
[2025-10-12 17:37:42] 2025-10-13 00:36:51,442 | INFO     | ready for new job
[2025-10-12 17:37:42] 2025-10-13 00:36:51,442 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:37:42] 2025-10-13 00:36:51,444 | INFO     | ***************************************
[2025-10-12 17:37:42] 2025-10-13 00:36:51,444 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:37:42] 2025-10-13 00:36:51,444 | INFO     | ***************************************
[2025-10-12 17:37:42] 2025-10-13 00:36:51,462 | INFO     | 
[2025-10-12 17:37:42] 2025-10-13 00:36:51,463 | INFO     | architecture information:
[2025-10-12 17:37:42] 2025-10-13 00:36:51,464 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:37:42] 2025-10-13 00:36:51,512 | INFO     | cat /etc/os-release:
[2025-10-12 17:37:42] NAME="CentOS Linux"
[2025-10-12 17:37:42] VERSION="7 (Core)"
[2025-10-12 17:37:42] ID="centos"
[2025-10-12 17:37:42] ID_LIKE="rhel fedora"
[2025-10-12 17:37:42] VERSION_ID="7"
[2025-10-12 17:37:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:37:42] ANSI_COLOR="0;31"
[2025-10-12 17:37:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:37:42] HOME_URL="https://www.centos.org/"
[2025-10-12 17:37:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:37:42] 
[2025-10-12 17:37:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:37:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:37:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:37:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:37:42] 
[2025-10-12 17:37:42] 2025-10-13 00:36:51,513 | INFO     | ***************************************
[2025-10-12 17:37:42] 2025-10-13 00:36:52,016 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 17:37:42] 2025-10-13 00:36:52,050 | INFO     | sufficient remaining disk space (1300057030656 B)
[2025-10-12 17:37:42] 2025-10-13 00:36:52,050 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:37:42] 2025-10-13 00:36:52,050 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:37:42] 2025-10-13 00:36:52,050 | INFO     | update_server=False
[2025-10-12 17:37:42] 2025-10-13 00:36:52,050 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:37:42] 2025-10-13 00:36:52,059 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:37:42] 2025-10-13 00:36:52,128 | INFO     | all data control threads have been joined
[2025-10-12 17:37:42] 2025-10-13 00:36:52,557 | INFO     | all payload control threads have been joined
[2025-10-12 17:37:42] 2025-10-13 00:36:52,859 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:37:42] 2025-10-13 00:36:52,859 | INFO     | aborting loop
[2025-10-12 17:37:42] 2025-10-13 00:36:53,059 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:37:42] 2025-10-13 00:36:53,119 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:37:42] 2025-10-13 00:36:53,134 | INFO     | [data] control thread has finished
[2025-10-12 17:37:42] 2025-10-13 00:36:53,136 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:37:42] 2025-10-13 00:36:53,151 | INFO     | all job control threads have been joined
[2025-10-12 17:37:42] 2025-10-13 00:36:53,434 | INFO     | [job] validate thread has finished
[2025-10-12 17:37:42] 2025-10-13 00:36:53,563 | INFO     | [payload] control thread has finished
[2025-10-12 17:37:42] 2025-10-13 00:36:53,613 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:37:42] 2025-10-13 00:36:53,815 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:37:42] 2025-10-13 00:36:53,871 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:37:42] 2025-10-13 00:36:54,132 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:37:42] 2025-10-13 00:36:54,157 | INFO     | [job] control thread has finished
[2025-10-12 17:37:42] 2025-10-13 00:36:54,209 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:37:42] 2025-10-13 00:36:54,269 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:37:42] 2025-10-13 00:36:54,387 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:37:42] 2025-10-13 00:36:54,537 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:37:42] 2025-10-13 00:36:55,148 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:37:42] 2025-10-13 00:36:55,543 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:37:42] 2025-10-13 00:36:56,080 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:37:42] 2025-10-13 00:37:21,082 | INFO     | PID=3592378 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 17:37:42] 2025-10-13 00:37:21,082 | INFO     | .. there are 33 such processes running
[2025-10-12 17:37:42] 2025-10-13 00:37:21,082 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:37:42] 2025-10-13 00:37:21,082 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:37:42] 2025-10-13 00:37:21,082 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:37:42] 2025-10-13 00:37:36,103 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:37:42] 2025-10-13 00:37:36,323 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140429680621376)>', '<ExcThread(monitor, started 140428921796352)>']
[2025-10-12 17:37:42] 2025-10-13 00:37:37,191 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:37:42] 2025-10-13 00:37:37,192 | INFO     | [monitor] control thread has ended
[2025-10-12 17:37:42] 2025-10-13 00:37:41,349 | INFO     | all workflow threads have been joined
[2025-10-12 17:37:42] 2025-10-13 00:37:41,349 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:37:42] 2025-10-13 00:37:41,349 | INFO     | traces error code: 0
[2025-10-12 17:37:42] 2025-10-13 00:37:41,349 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:37:42] 2025-10-13 00:37:41,600 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:37:42] 2025-10-13 00:37:41,640 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:37:42] 2025-10-13 00:37:41,654 [wrapper] pilotpid: 3592378
[2025-10-12 17:37:42] 2025-10-13 00:37:41,661 [wrapper] Pilot exit status: 0
[2025-10-12 17:37:42] 2025-10-13 00:37:41,703 [wrapper] pandaids: 6840749846
[2025-10-12 17:37:42] 2025-10-13 00:37:41,902 [wrapper] cleanup supervisor_pilot 3592384 3592379
[2025-10-12 17:37:42] 2025-10-13 00:37:41,912 [wrapper] Test setup, not cleaning
[2025-10-12 17:37:42] 2025-10-13 00:37:41,925 [wrapper] apfmon messages muted
[2025-10-12 17:37:42] 2025-10-13 00:37:41,954 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:37:42] 2025-10-13 00:37:41,965 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:37:42]  *** Error codes and diagnostics ***
[2025-10-12 17:37:42]     "exeErrorCode": 65,
[2025-10-12 17:37:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 17:37:42]     "pilotErrorCode": 1305,
[2025-10-12 17:37:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 17:37:42]  *** Listing of results directory ***
[2025-10-12 17:37:42] total 217920
[2025-10-12 17:37:42] -rw-r--r--. 1 boinc boinc    557409 Oct 12 13:55 pilot3.tar.gz
[2025-10-12 17:37:42] -rw-r--r--. 1 boinc boinc      5112 Oct 12 13:57 queuedata.json
[2025-10-12 17:37:42] -rwx------. 1 boinc boinc     36292 Oct 12 13:59 runpilot2-wrapper.sh
[2025-10-12 17:37:42] -rw-r--r--. 1 boinc boinc       100 Oct 12 17:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:37:42] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 17:30 run_atlas
[2025-10-12 17:37:42] -rw-r--r--. 1 boinc boinc       105 Oct 12 17:30 job.xml
[2025-10-12 17:37:42] -rw-r--r--. 1 boinc boinc      6444 Oct 12 17:30 init_data.xml
[2025-10-12 17:37:42] -rw-r--r--. 2 boinc boinc 218998305 Oct 12 17:30 EVNT.46676267._004761.pool.root.1
[2025-10-12 17:37:42] -rw-r--r--. 2 boinc boinc     15120 Oct 12 17:30 start_atlas.sh
[2025-10-12 17:37:42] drwxrwx--x. 2 boinc boinc      4096 Oct 12 17:30 shared
[2025-10-12 17:37:42] -rw-r--r--. 2 boinc boinc    569678 Oct 12 17:30 input.tar.gz
[2025-10-12 17:37:42] -rw-r--r--. 1 boinc boinc         0 Oct 12 17:30 boinc_lockfile
[2025-10-12 17:37:42] -rw-r--r--. 1 boinc boinc      2550 Oct 12 17:30 pandaJob.out
[2025-10-12 17:37:42] -rw-------. 1 boinc boinc    975603 Oct 12 17:31 agis_schedconf.cvmfs.json
[2025-10-12 17:37:42] -rw-------. 1 boinc boinc   1560580 Oct 12 17:31 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:37:42] drwx------. 5 boinc boinc      4096 Oct 12 17:31 pilot3
[2025-10-12 17:37:42] -rw-r--r--. 1 boinc boinc       524 Oct 12 17:34 boinc_task_state.xml
[2025-10-12 17:37:42] -rw-------. 1 boinc boinc       983 Oct 12 17:34 memory_monitor_summary.json
[2025-10-12 17:37:42] -rw-------. 1 boinc boinc     22787 Oct 12 17:34 log.46676269._089274.job.log.tgz.1
[2025-10-12 17:37:42] -rw-------. 1 boinc boinc        95 Oct 12 17:36 pilot_heartbeat.json
[2025-10-12 17:37:42] -rw-------. 1 boinc boinc      8405 Oct 12 17:36 heartbeat.json
[2025-10-12 17:37:42] -rw-r--r--. 1 boinc boinc      8192 Oct 12 17:37 boinc_mmap_file
[2025-10-12 17:37:42] -rw-------. 1 boinc boinc      4823 Oct 12 17:37 pilotlog.txt
[2025-10-12 17:37:42] -rw-r--r--. 1 boinc boinc        23 Oct 12 17:37 wrapper_checkpoint.txt
[2025-10-12 17:37:42] -rw-------. 1 boinc boinc     99913 Oct 12 17:37 log.46676269._089274.job.log.1
[2025-10-12 17:37:42] -rw-------. 1 boinc boinc       188 Oct 12 17:37 output.list
[2025-10-12 17:37:42] -rw-r--r--. 1 boinc boinc       620 Oct 12 17:37 runtime_log
[2025-10-12 17:37:42] -rw-------. 1 boinc boinc    143360 Oct 12 17:37 result.tar.gz
[2025-10-12 17:37:42] -rw-r--r--. 1 boinc boinc      8526 Oct 12 17:37 runtime_log.err
[2025-10-12 17:37:42] -rw-------. 1 boinc boinc       644 Oct 12 17:37 5jWLDmrKIS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmE2UMDmrY6lAn.diag
[2025-10-12 17:37:42] -rw-r--r--. 1 boinc boinc     21923 Oct 12 17:37 stderr.txt
[2025-10-12 17:37:42] No HITS result produced
[2025-10-12 17:37:42]  *** Contents of shared directory: ***
[2025-10-12 17:37:42] total 214588
[2025-10-12 17:37:42] -rw-r--r--. 2 boinc boinc 218998305 Oct 12 17:30 ATLAS.root_0
[2025-10-12 17:37:42] -rw-r--r--. 2 boinc boinc     15120 Oct 12 17:30 start_atlas.sh
[2025-10-12 17:37:42] -rw-r--r--. 2 boinc boinc    569678 Oct 12 17:30 input.tar.gz
[2025-10-12 17:37:42] -rw-------. 1 boinc boinc    143360 Oct 12 17:37 result.tar.gz
17:37:43 (3588337): run_atlas exited; CPU time 32.271317
17:37:43 (3588337): called boinc_finish(0)

</stderr_txt>
]]>

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