Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:10:45 (1503283): wrapper (7.7.26015): starting
23:10:45 (1503283): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 23:10:45] Arguments: --nthreads 8
[2025-10-12 23:10:45] Threads: 8
[2025-10-12 23:10:45] Checking for CVMFS
[2025-10-12 23:10:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:10:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:10:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:10:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:10:47] 2.13.2.0 6302 45143 278336 151645 3 619 21270295 32935936 22254 16776704 0 134096196 99.645 122140651 30282 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 23:10:47] CVMFS is ok
[2025-10-12 23:10:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:10:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:10:47] Further information can be found at the LHC@home message board.
[2025-10-12 23:10:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:10:47] Checking for apptainer binary...
[2025-10-12 23:10:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:10:47] Running /usr/bin/apptainer --version
[2025-10-12 23:10:48] apptainer version 1.4.3-1.el9
[2025-10-12 23:10:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:10:48] c6-1-24-4.aglt2.org
[2025-10-12 23:10:48] apptainer works
[2025-10-12 23:10:48] Set ATHENA_PROC_NUMBER=8
[2025-10-12 23:10:48] Set ATHENA_CORE_NUMBER=8
[2025-10-12 23:10:49] Starting ATLAS job with PandaID=6840715208
[2025-10-12 23:10:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:44:20]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:44:20] 2025-10-13 12:42:59,768 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:44:20] 2025-10-13 12:42:59,769 | INFO     | sum of square deviations: 54161487237.71368
[2025-10-13 08:44:20] 2025-10-13 12:42:59,774 | INFO     | sum of deviations: 329318390082.9731
[2025-10-13 08:44:20] 2025-10-13 12:42:59,775 | INFO     | mean x: 1760342315.415027
[2025-10-13 08:44:20] 2025-10-13 12:42:59,775 | INFO     | mean y: 2046314.7889087657
[2025-10-13 08:44:20] 2025-10-13 12:42:59,775 | INFO     | -- intersect: -10701372791.172136
[2025-10-13 08:44:20] 2025-10-13 12:42:59,775 | INFO     | intersect: -10701372791.172136
[2025-10-13 08:44:20] 2025-10-13 12:42:59,775 | INFO     | chi2: 5.3499443068683075
[2025-10-13 08:44:20] 2025-10-13 12:42:59,776 | INFO     | sum of square deviations: 52721093779.344666
[2025-10-13 08:44:20] 2025-10-13 12:42:59,782 | INFO     | sum of deviations: 366792486354.274
[2025-10-13 08:44:20] 2025-10-13 12:42:59,782 | INFO     | mean x: 1760342162.9187725
[2025-10-13 08:44:20] 2025-10-13 12:42:59,782 | INFO     | mean y: 2050260.0505415162
[2025-10-13 08:44:20] 2025-10-13 12:42:59,782 | INFO     | -- intersect: -12245045399.110554
[2025-10-13 08:44:20] 2025-10-13 12:42:59,782 | INFO     | intersect: -12245045399.110554
[2025-10-13 08:44:20] 2025-10-13 12:42:59,783 | INFO     | chi2: 4.6342471694003375
[2025-10-13 08:44:20] 2025-10-13 12:42:59,783 | INFO     | current chi2=4.6342471694003375 (change=13.377655848662787 %)
[2025-10-13 08:44:20] 2025-10-13 12:42:59,783 | INFO     | right removable region: 553
[2025-10-13 08:44:20] 2025-10-13 12:42:59,784 | INFO     | sum of square deviations: 52720952259.344696
[2025-10-13 08:44:20] 2025-10-13 12:42:59,789 | INFO     | sum of deviations: 204485259750.7905
[2025-10-13 08:44:20] 2025-10-13 12:42:59,789 | INFO     | mean x: 1760342467.9187725
[2025-10-13 08:44:20] 2025-10-13 12:42:59,789 | INFO     | mean y: 2059517.750902527
[2025-10-13 08:44:20] 2025-10-13 12:42:59,789 | INFO     | -- intersect: -6825664022.445866
[2025-10-13 08:44:20] 2025-10-13 12:42:59,789 | INFO     | intersect: -6825664022.445866
[2025-10-13 08:44:20] 2025-10-13 12:42:59,790 | INFO     | chi2: 2.6316437137871542
[2025-10-13 08:44:20] 2025-10-13 12:42:59,790 | INFO     | current chi2=2.6316437137871542 (change=50.80988580743493 %)
[2025-10-13 08:44:20] 2025-10-13 12:42:59,791 | INFO     | sum of square deviations: 51306252427.643074
[2025-10-13 08:44:20] 2025-10-13 12:42:59,796 | INFO     | sum of deviations: 126497513153.94919
[2025-10-13 08:44:20] 2025-10-13 12:42:59,796 | INFO     | mean x: 1760342620.4189436
[2025-10-13 08:44:20] 2025-10-13 12:42:59,796 | INFO     | mean y: 2067918.7741347905
[2025-10-13 08:44:20] 2025-10-13 12:42:59,796 | INFO     | -- intersect: -4338123641.619905
[2025-10-13 08:44:20] 2025-10-13 12:42:59,796 | INFO     | intersect: -4338123641.619905
[2025-10-13 08:44:20] 2025-10-13 12:42:59,797 | INFO     | chi2: 1.6446153756870565
[2025-10-13 08:44:20] 2025-10-13 12:42:59,797 | INFO     | current chi2=1.6446153756870565 (change=37.506153774884744 %)
[2025-10-13 08:44:20] 2025-10-13 12:42:59,797 | INFO     | sum of square deviations: 49917021346.75733
[2025-10-13 08:44:20] 2025-10-13 12:42:59,803 | INFO     | sum of deviations: 88641796186.59193
[2025-10-13 08:44:20] 2025-10-13 12:42:59,803 | INFO     | mean x: 1760342772.922794
[2025-10-13 08:44:20] 2025-10-13 12:42:59,803 | INFO     | mean y: 2072074.3474264706
[2025-10-13 08:44:20] 2025-10-13 12:42:59,803 | INFO     | -- intersect: -3123914634.915604
[2025-10-13 08:44:20] 2025-10-13 12:42:59,803 | INFO     | intersect: -3123914634.915604
[2025-10-13 08:44:20] 2025-10-13 12:42:59,804 | INFO     | chi2: 1.4300740601765982
[2025-10-13 08:44:20] 2025-10-13 12:42:59,804 | INFO     | current chi2=1.4300740601765982 (change=13.045075382493687 %)
[2025-10-13 08:44:20] 2025-10-13 12:42:59,804 | INFO     | left removable region: 30
[2025-10-13 08:44:20] 2025-10-13 12:42:59,805 | INFO     | sum of square deviations: 44356210094.0612
[2025-10-13 08:44:20] 2025-10-13 12:42:59,809 | INFO     | sum of deviations: 84521868847.78963
[2025-10-13 08:44:20] 2025-10-13 12:42:59,810 | INFO     | mean x: 1760343047.4282982
[2025-10-13 08:44:20] 2025-10-13 12:42:59,810 | INFO     | mean y: 2081482.5277246654
[2025-10-13 08:44:20] 2025-10-13 12:42:59,810 | INFO     | -- intersect: -3352296266.7510376
[2025-10-13 08:44:20] 2025-10-13 12:42:59,810 | INFO     | intersect: -3352296266.7510376
[2025-10-13 08:44:20] 2025-10-13 12:42:59,810 | INFO     | chi2: 0.4946166729114875
[2025-10-13 08:44:20] 2025-10-13 12:42:59,811 | INFO     | -- intersect: -3352296266.7510376
[2025-10-13 08:44:20] 2025-10-13 12:42:59,811 | INFO     | current memory leak: 1.91 B/s (using 523 data points, chi2=0.49)
[2025-10-13 08:44:20] 2025-10-13 12:42:59,811 | INFO     | could have reported an average CPU frequency of 2805 MHz (22 samples)
[2025-10-13 08:44:20] 2025-10-13 12:42:59,812 | INFO     | ..............................
[2025-10-13 08:44:20] 2025-10-13 12:42:59,812 | INFO     | . Timing measurements:
[2025-10-13 08:44:20] 2025-10-13 12:42:59,812 | INFO     | . get job = 0 s
[2025-10-13 08:44:20] 2025-10-13 12:42:59,812 | INFO     | . initial setup = 4 s
[2025-10-13 08:44:20] 2025-10-13 12:42:59,812 | INFO     | . payload setup = 47 s
[2025-10-13 08:44:20] 2025-10-13 12:42:59,812 | INFO     | . stage-in = 0 s
[2025-10-13 08:44:20] 2025-10-13 12:42:59,812 | INFO     | . payload execution = 34107 s
[2025-10-13 08:44:20] 2025-10-13 12:42:59,812 | INFO     | . stage-out = 3 s
[2025-10-13 08:44:20] 2025-10-13 12:42:59,812 | INFO     | . log creation = 0 s
[2025-10-13 08:44:20] 2025-10-13 12:42:59,812 | INFO     | ..............................
[2025-10-13 08:44:20] 2025-10-13 12:42:59,902 | INFO     | time since job start (34259s) is within the limit (172800.0s)
[2025-10-13 08:44:20] 2025-10-13 12:42:59,902 | INFO     | 
[2025-10-13 08:44:20] 2025-10-13 12:42:59,902 | INFO     | job summary report
[2025-10-13 08:44:20] 2025-10-13 12:42:59,902 | INFO     | --------------------------------------------------
[2025-10-13 08:44:20] 2025-10-13 12:42:59,902 | INFO     | PanDA job id: 6840715208
[2025-10-13 08:44:20] 2025-10-13 12:42:59,903 | INFO     | task id: 46676269
[2025-10-13 08:44:20] 2025-10-13 12:42:59,903 | INFO     | errors: (none)
[2025-10-13 08:44:20] 2025-10-13 12:42:59,903 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:44:20] 2025-10-13 12:42:59,903 | INFO     | pilot state: finished 
[2025-10-13 08:44:20] 2025-10-13 12:42:59,903 | INFO     | transexitcode: 0
[2025-10-13 08:44:20] 2025-10-13 12:42:59,903 | INFO     | exeerrorcode: 0
[2025-10-13 08:44:20] 2025-10-13 12:42:59,903 | INFO     | exeerrordiag: 
[2025-10-13 08:44:20] 2025-10-13 12:42:59,903 | INFO     | exitcode: 0
[2025-10-13 08:44:20] 2025-10-13 12:42:59,903 | INFO     | exitmsg: OK
[2025-10-13 08:44:20] 2025-10-13 12:42:59,903 | INFO     | cpuconsumptiontime: 46109 s
[2025-10-13 08:44:20] 2025-10-13 12:42:59,903 | INFO     | nevents: 400
[2025-10-13 08:44:20] 2025-10-13 12:42:59,903 | INFO     | neventsw: 0
[2025-10-13 08:44:20] 2025-10-13 12:42:59,903 | INFO     | pid: 1517766
[2025-10-13 08:44:20] 2025-10-13 12:42:59,903 | INFO     | pgrp: 1517766
[2025-10-13 08:44:20] 2025-10-13 12:42:59,903 | INFO     | corecount: 8
[2025-10-13 08:44:20] 2025-10-13 12:42:59,903 | INFO     | event service: False
[2025-10-13 08:44:20] 2025-10-13 12:42:59,903 | INFO     | sizes: {0: 2347978, 1: 2348663, 2: 2348862, 13: 2348862, 24: 2348918, 35: 2340232, 36: 2349364, 46: 2349392, 34158: 2389224, 34159: 2389223, 34162: 2398277, 34163:
[2025-10-13 08:44:20] 2025-10-13 12:42:59,904 | INFO     | --------------------------------------------------
[2025-10-13 08:44:20] 2025-10-13 12:42:59,904 | INFO     | 
[2025-10-13 08:44:20] 2025-10-13 12:42:59,904 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 08:44:20] 2025-10-13 12:42:59,921 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:44:20] 2025-10-13 12:42:59,922 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:44:20] 2025-10-13 12:42:59,922 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:44:20] 2025-10-13 12:42:59,922 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:44:20] 2025-10-13 12:42:59,922 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:44:20] 2025-10-13 12:42:59,922 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:44:20] 2025-10-13 12:42:59,922 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:44:20] 2025-10-13 12:42:59,923 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:44:20] 2025-10-13 12:42:59,923 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:44:20] 2025-10-13 12:42:59,923 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:44:20] 2025-10-13 12:42:59,923 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:44:20] 2025-10-13 12:42:59,923 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:44:20] 2025-10-13 12:42:59,923 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:44:20] 2025-10-13 12:42:59,923 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:44:20] 2025-10-13 12:42:59,923 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:44:20] 2025-10-13 12:42:59,923 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:44:20] 2025-10-13 12:42:59,923 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:44:20] 2025-10-13 12:42:59,923 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:44:20] 2025-10-13 12:42:59,924 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:44:20] 2025-10-13 12:42:59,924 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:44:20] 2025-10-13 12:42:59,924 | INFO     | job 6840715208 has completed (purged errors)
[2025-10-13 08:44:20] 2025-10-13 12:42:59,924 | INFO     | overall cleanup function is called
[2025-10-13 08:44:20] 2025-10-13 12:43:00,990 | INFO     | --- collectZombieJob: --- 10, [1517766]
[2025-10-13 08:44:20] 2025-10-13 12:43:00,992 | INFO     | zombie collector waiting for pid 1517766
[2025-10-13 08:44:20] 2025-10-13 12:43:00,992 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:44:20] 2025-10-13 12:43:00,992 | INFO     | collected zombie processes
[2025-10-13 08:44:20] 2025-10-13 12:43:00,992 | INFO     | will attempt to kill all subprocesses of pid=1517766
[2025-10-13 08:44:20] 2025-10-13 12:43:01,977 | INFO     | PID=1507891 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:44:20] 2025-10-13 12:43:01,978 | INFO     | .. there are 26 such processes running
[2025-10-13 08:44:20] 2025-10-13 12:43:01,985 | INFO     | process IDs to be killed: [1517766] (in reverse order)
[2025-10-13 08:44:20] 2025-10-13 12:43:02,544 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:44:20] 2025-10-13 12:43:02,544 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:44:20] 2025-10-13 12:43:02,640 | INFO     | did not find any defunct processes belonging to 1517766
[2025-10-13 08:44:20] 2025-10-13 12:43:02,654 | INFO     | did not find any defunct processes belonging to 1517766
[2025-10-13 08:44:20] 2025-10-13 12:43:02,655 | INFO     | ready for new job
[2025-10-13 08:44:20] 2025-10-13 12:43:02,655 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:44:20] 2025-10-13 12:43:02,659 | INFO     | ***************************************
[2025-10-13 08:44:20] 2025-10-13 12:43:02,659 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:44:20] 2025-10-13 12:43:02,659 | INFO     | ***************************************
[2025-10-13 08:44:20] 2025-10-13 12:43:02,659 | INFO     | 
[2025-10-13 08:44:20] 2025-10-13 12:43:02,699 | INFO     | architecture information:
[2025-10-13 08:44:20] 2025-10-13 12:43:02,704 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:44:20] 2025-10-13 12:43:02,747 | INFO     | cat /etc/os-release:
[2025-10-13 08:44:20] NAME="CentOS Linux"
[2025-10-13 08:44:20] VERSION="7 (Core)"
[2025-10-13 08:44:20] ID="centos"
[2025-10-13 08:44:20] ID_LIKE="rhel fedora"
[2025-10-13 08:44:20] VERSION_ID="7"
[2025-10-13 08:44:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:44:20] ANSI_COLOR="0;31"
[2025-10-13 08:44:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:44:20] HOME_URL="https://www.centos.org/"
[2025-10-13 08:44:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:44:20] 
[2025-10-13 08:44:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:44:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:44:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:44:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:44:20] 
[2025-10-13 08:44:20] 2025-10-13 12:43:02,747 | INFO     | ***************************************
[2025-10-13 08:44:20] 2025-10-13 12:43:03,250 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 08:44:20] 2025-10-13 12:43:03,326 | INFO     | sufficient remaining disk space (75329699840 B)
[2025-10-13 08:44:20] 2025-10-13 12:43:03,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:44:20] 2025-10-13 12:43:03,327 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:44:20] 2025-10-13 12:43:03,327 | INFO     | update_server=False
[2025-10-13 08:44:20] 2025-10-13 12:43:03,327 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:44:20] 2025-10-13 12:43:03,327 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:44:20] 2025-10-13 12:43:03,327 | INFO     | aborting loop
[2025-10-13 08:44:20] 2025-10-13 12:43:03,569 | INFO     | all payload control threads have been joined
[2025-10-13 08:44:20] 2025-10-13 12:43:04,199 | INFO     | all data control threads have been joined
[2025-10-13 08:44:20] 2025-10-13 12:43:04,333 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:44:20] 2025-10-13 12:43:04,340 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:44:20] 2025-10-13 12:43:04,480 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:44:20] 2025-10-13 12:43:04,576 | INFO     | [payload] control thread has finished
[2025-10-13 08:44:20] 2025-10-13 12:43:04,684 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:44:20] 2025-10-13 12:43:04,882 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:44:20] 2025-10-13 12:43:04,972 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:44:20] 2025-10-13 12:43:04,993 | INFO     | all job control threads have been joined
[2025-10-13 08:44:20] 2025-10-13 12:43:05,199 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:44:20] 2025-10-13 12:43:05,206 | INFO     | [data] control thread has finished
[2025-10-13 08:44:20] 2025-10-13 12:43:05,360 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:44:20] 2025-10-13 12:43:05,384 | INFO     | [job] validate thread has finished
[2025-10-13 08:44:20] 2025-10-13 12:43:05,725 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:44:20] 2025-10-13 12:43:05,756 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:44:20] 2025-10-13 12:43:05,767 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:44:20] 2025-10-13 12:43:05,979 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:44:20] 2025-10-13 12:43:05,999 | INFO     | [job] control thread has finished
[2025-10-13 08:44:20] 2025-10-13 12:43:06,704 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:44:20] 2025-10-13 12:43:06,710 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:44:20] 2025-10-13 12:43:10,716 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:44:20] 2025-10-13 12:43:35,198 | INFO     | PID=1507891 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:44:20] 2025-10-13 12:43:35,198 | INFO     | .. there are 25 such processes running
[2025-10-13 08:44:20] 2025-10-13 12:43:35,199 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:44:20] 2025-10-13 12:43:35,199 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:44:20] 2025-10-13 12:43:35,199 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:44:20] 2025-10-13 12:44:02,843 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:44:20] 2025-10-13 12:44:04,285 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140674413930304)>', '<ExcThread(monitor, started 140673793648384)>']
[2025-10-13 08:44:20] 2025-10-13 12:44:04,391 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:44:20] 2025-10-13 12:44:04,392 | INFO     | [monitor] control thread has ended
[2025-10-13 08:44:20] 2025-10-13 12:44:09,312 | INFO     | all workflow threads have been joined
[2025-10-13 08:44:20] 2025-10-13 12:44:09,321 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:44:20] 2025-10-13 12:44:09,321 | INFO     | traces error code: 0
[2025-10-13 08:44:20] 2025-10-13 12:44:09,321 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:44:20] 2025-10-13 12:44:09,708 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:44:20] 2025-10-13 12:44:09,729 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:44:20] 2025-10-13 12:44:09,759 [wrapper] pilotpid: 1507891
[2025-10-13 08:44:20] 2025-10-13 12:44:09,780 [wrapper] Pilot exit status: 0
[2025-10-13 08:44:20] 2025-10-13 12:44:09,862 [wrapper] pandaids: 6840715208
[2025-10-13 08:44:20] 2025-10-13 12:44:09,939 [wrapper] cleanup supervisor_pilot 3231285 1507892
[2025-10-13 08:44:20] 2025-10-13 12:44:09,983 [wrapper] Test setup, not cleaning
[2025-10-13 08:44:20] 2025-10-13 12:44:10,004 [wrapper] apfmon messages muted
[2025-10-13 08:44:20] 2025-10-13 12:44:10,034 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:44:20] 2025-10-13 12:44:10,059 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:44:20]  *** Error codes and diagnostics ***
[2025-10-13 08:44:20]     "exeErrorCode": 0,
[2025-10-13 08:44:20]     "exeErrorDiag": "",
[2025-10-13 08:44:20]     "pilotErrorCode": 0,
[2025-10-13 08:44:20]     "pilotErrorDiag": "",
[2025-10-13 08:44:20]  *** Listing of results directory ***
[2025-10-13 08:44:20] total 417904
[2025-10-13 08:44:20] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 15:50 pilot3.tar.gz
[2025-10-13 08:44:20] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:01 queuedata.json
[2025-10-13 08:44:20] -rwx------. 1 boincer umatlas     36292 Oct 12 16:02 runpilot2-wrapper.sh
[2025-10-13 08:44:20] -rw-r--r--. 1 boincer umatlas       100 Oct 12 23:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:44:20] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 23:10 run_atlas
[2025-10-13 08:44:20] -rw-r--r--. 1 boincer umatlas       105 Oct 12 23:10 job.xml
[2025-10-13 08:44:20] -rw-r--r--. 2 boincer umatlas 220477771 Oct 12 23:10 EVNT.46676267._004481.pool.root.1
[2025-10-13 08:44:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:10 start_atlas.sh
[2025-10-13 08:44:20] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 23:10 shared
[2025-10-13 08:44:20] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 23:10 input.tar.gz
[2025-10-13 08:44:20] -rw-r--r--. 1 boincer umatlas         0 Oct 12 23:10 boinc_lockfile
[2025-10-13 08:44:20] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 23:10 pandaJob.out
[2025-10-13 08:44:20] -rw-------. 1 boincer umatlas    974373 Oct 12 23:11 agis_schedconf.cvmfs.json
[2025-10-13 08:44:20] drwx------. 5 boincer umatlas      4096 Oct 12 23:12 pilot3
[2025-10-13 08:44:20] -rw-r--r--. 1 boincer umatlas      6843 Oct 13 08:38 init_data.xml
[2025-10-13 08:44:20] -rw-------. 1 boincer umatlas 193534725 Oct 13 08:41 HITS.46676269._088160.pool.root.1
[2025-10-13 08:44:20] -rw-r--r--. 1 boincer umatlas       531 Oct 13 08:42 boinc_task_state.xml
[2025-10-13 08:44:20] -rw-------. 1 boincer umatlas      1043 Oct 13 08:42 memory_monitor_summary.json
[2025-10-13 08:44:20] -rw-------. 1 boincer umatlas   1560580 Oct 13 08:42 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:44:20] -rw-------. 1 boincer umatlas    711506 Oct 13 08:42 log.46676269._088160.job.log.tgz.1
[2025-10-13 08:44:20] -rw-------. 1 boincer umatlas      7830 Oct 13 08:42 heartbeat.json
[2025-10-13 08:44:20] -rw-------. 1 boincer umatlas        95 Oct 13 08:43 pilot_heartbeat.json
[2025-10-13 08:44:20] -rw-------. 1 boincer umatlas      4824 Oct 13 08:44 pilotlog.txt
[2025-10-13 08:44:20] -rw-------. 1 boincer umatlas   4300877 Oct 13 08:44 log.46676269._088160.job.log.1
[2025-10-13 08:44:20] -rw-------. 1 boincer umatlas       357 Oct 13 08:44 output.list
[2025-10-13 08:44:20] -rw-r--r--. 1 boincer umatlas       620 Oct 13 08:44 runtime_log
[2025-10-13 08:44:20] -rw-------. 1 boincer umatlas   5027840 Oct 13 08:44 result.tar.gz
[2025-10-13 08:44:20] -rw-r--r--. 1 boincer umatlas      8709 Oct 13 08:44 runtime_log.err
[2025-10-13 08:44:20] -rw-------. 1 boincer umatlas       659 Oct 13 08:44 b7xLDmxRHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9MlNDmjiv3Jn.diag
[2025-10-13 08:44:20] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 08:44 boinc_mmap_file
[2025-10-13 08:44:20] -rw-r--r--. 1 boincer umatlas        28 Oct 13 08:44 wrapper_checkpoint.txt
[2025-10-13 08:44:20] -rw-r--r--. 1 boincer umatlas     21176 Oct 13 08:44 stderr.txt
[2025-10-13 08:44:20] HITS file was successfully produced:
[2025-10-13 08:44:20] -rw-------. 1 boincer umatlas 193534725 Oct 13 08:41 shared/HITS.pool.root.1
[2025-10-13 08:44:20]  *** Contents of shared directory: ***
[2025-10-13 08:44:20] total 409804
[2025-10-13 08:44:20] -rw-r--r--. 2 boincer umatlas 220477771 Oct 12 23:10 ATLAS.root_0
[2025-10-13 08:44:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 23:10 start_atlas.sh
[2025-10-13 08:44:20] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 23:10 input.tar.gz
[2025-10-13 08:44:20] -rw-------. 1 boincer umatlas 193534725 Oct 13 08:41 HITS.pool.root.1
[2025-10-13 08:44:20] -rw-------. 1 boincer umatlas   5027840 Oct 13 08:44 result.tar.gz
08:44:22 (1503283): run_atlas exited; CPU time 47199.824100
08:44:22 (1503283): called boinc_finish(0)

</stderr_txt>
]]>

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