Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:03:53 (3594228): wrapper (7.7.26015): starting
12:03:53 (3594228): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 12:03:53] Arguments: --nthreads 3
[2025-10-13 12:03:53] Threads: 3
[2025-10-13 12:03:53] Checking for CVMFS
[2025-10-13 12:03:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 12:03:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 12:03:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 12:03:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 12:03:54] 2.9.2.0 1855376 5648 86508 151656 1 57 26009685 36864000 0 130560 0 4593946 99.991 190953 713 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 12:03:54] CVMFS is ok
[2025-10-13 12:03:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 12:03:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 12:03:54] Further information can be found at the LHC@home message board.
[2025-10-13 12:03:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 12:03:54] Checking for apptainer binary...
[2025-10-13 12:03:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 12:03:54] Running /usr/bin/apptainer --version
[2025-10-13 12:03:54] apptainer version 1.4.1-1.1
[2025-10-13 12:03:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 12:03:54] thA331b
[2025-10-13 12:03:54] apptainer works
[2025-10-13 12:03:54] Set ATHENA_PROC_NUMBER=3
[2025-10-13 12:03:54] Set ATHENA_CORE_NUMBER=3
[2025-10-13 12:03:54] Starting ATLAS job with PandaID=6840749529
[2025-10-13 12:03:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:25:11]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:25:11] 2025-10-13 11:24:12,912 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:25:11] 2025-10-13 11:24:13,224 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:25:11] 2025-10-13 11:24:13,226 | INFO     | [data] control thread has finished
[2025-10-13 13:25:11] 2025-10-13 11:24:13,469 | INFO     | [job] control thread has finished
[2025-10-13 13:25:11] 2025-10-13 11:24:13,746 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:25:11] 2025-10-13 11:24:13,766 | INFO     | [job] validate thread has finished
[2025-10-13 13:25:11] 2025-10-13 11:24:13,852 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:25:11] 2025-10-13 11:24:13,878 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:25:11] 2025-10-13 11:24:13,886 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:25:11] 2025-10-13 11:24:16,549 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:25:11] 2025-10-13 11:24:21,826 | INFO     | job.realtimelogging is not enabled
[2025-10-13 13:25:11] 2025-10-13 11:24:22,832 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:25:11] 2025-10-13 11:24:41,234 | INFO     | PID=3597945 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 13:25:11] 2025-10-13 11:24:41,234 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:25:11] 2025-10-13 11:24:41,234 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:25:11] 2025-10-13 11:24:41,234 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:25:11] 2025-10-13 11:25:05,122 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:25:11] 2025-10-13 11:25:06,220 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140269219362624)>', '<ExcThread(monitor, started 140268590327552)>']
[2025-10-13 13:25:11] 2025-10-13 11:25:06,364 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:25:11] 2025-10-13 11:25:06,364 | INFO     | [monitor] control thread has ended
[2025-10-13 13:25:11] 2025-10-13 11:25:11,245 | INFO     | all workflow threads have been joined
[2025-10-13 13:25:11] 2025-10-13 11:25:11,246 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:25:11] 2025-10-13 11:25:11,246 | INFO     | traces error code: 0
[2025-10-13 13:25:11] 2025-10-13 11:25:11,246 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:25:11] 2025-10-13 11:25:11,297 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:25:11] 2025-10-13 11:25:11,299 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:25:11] 2025-10-13 11:25:11,301 [wrapper] pilotpid: 3597945
[2025-10-13 13:25:11] 2025-10-13 11:25:11,304 [wrapper] Pilot exit status: 0
[2025-10-13 13:25:11] 2025-10-13 11:25:11,311 [wrapper] pandaids: 6840749529
[2025-10-13 13:25:11] 2025-10-13 11:25:11,327 [wrapper] cleanup supervisor_pilot 3616264 3597946
[2025-10-13 13:25:11] 2025-10-13 11:25:11,329 [wrapper] Test setup, not cleaning
[2025-10-13 13:25:11] 2025-10-13 11:25:11,331 [wrapper] apfmon messages muted
[2025-10-13 13:25:11] 2025-10-13 11:25:11,333 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:25:11] 2025-10-13 11:25:11,335 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:25:11]  *** Error codes and diagnostics ***
[2025-10-13 13:25:11]     "exeErrorCode": 0,
[2025-10-13 13:25:11]     "exeErrorDiag": "",
[2025-10-13 13:25:11]     "pilotErrorCode": 0,
[2025-10-13 13:25:11]     "pilotErrorDiag": "",
[2025-10-13 13:25:11]  *** Listing of results directory ***
[2025-10-13 13:25:11] total 406808
[2025-10-13 13:25:11] -rw-r--r-- 1 boinc boinc    557409 Oct 12 22:23 pilot3.tar.gz
[2025-10-13 13:25:11] -rw-r--r-- 1 boinc boinc      5112 Oct 12 22:42 queuedata.json
[2025-10-13 13:25:11] -rwx------ 1 boinc boinc     36292 Oct 12 22:43 runpilot2-wrapper.sh
[2025-10-13 13:25:11] -rw-r--r-- 1 boinc boinc       100 Oct 13 12:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:25:11] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 12:03 run_atlas
[2025-10-13 13:25:11] -rw-r--r-- 1 boinc boinc       105 Oct 13 12:03 job.xml
[2025-10-13 13:25:11] -rw-r--r-- 2 boinc boinc 219960098 Oct 13 12:03 EVNT.46676267._004858.pool.root.1
[2025-10-13 13:25:11] -rw-r--r-- 2 boinc boinc    569679 Oct 13 12:03 input.tar.gz
[2025-10-13 13:25:11] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:03 start_atlas.sh
[2025-10-13 13:25:11] drwxrwx--x 2 boinc boinc      4096 Oct 13 12:03 shared
[2025-10-13 13:25:11] -rw-r--r-- 1 boinc boinc         0 Oct 13 12:03 boinc_setup_complete
[2025-10-13 13:25:11] -rw-r--r-- 1 boinc boinc      6441 Oct 13 12:03 init_data.xml
[2025-10-13 13:25:11] -rw-r--r-- 1 boinc boinc         0 Oct 13 12:03 boinc_lockfile
[2025-10-13 13:25:11] -rw-r--r-- 1 boinc boinc      2549 Oct 13 12:03 pandaJob.out
[2025-10-13 13:25:11] -rw------- 1 boinc boinc    972849 Oct 13 12:03 agis_schedconf.cvmfs.json
[2025-10-13 13:25:11] -rw------- 1 boinc boinc   1560580 Oct 13 12:03 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:25:11] drwx------ 5 boinc boinc      4096 Oct 13 12:03 pilot3
[2025-10-13 13:25:11] -rw-r--r-- 1 boinc boinc       529 Oct 13 13:23 boinc_task_state.xml
[2025-10-13 13:25:11] -rw------- 1 boinc boinc 190828666 Oct 13 13:23 HITS.46676269._088961.pool.root.1
[2025-10-13 13:25:11] -rw------- 1 boinc boinc      1018 Oct 13 13:23 memory_monitor_summary.json
[2025-10-13 13:25:11] -rw------- 1 boinc boinc    238789 Oct 13 13:24 log.46676269._088961.job.log.tgz.1
[2025-10-13 13:25:11] -rw------- 1 boinc boinc      7753 Oct 13 13:24 heartbeat.json
[2025-10-13 13:25:11] -rw------- 1 boinc boinc        95 Oct 13 13:24 pilot_heartbeat.json
[2025-10-13 13:25:11] -rw-r--r-- 1 boinc boinc      8192 Oct 13 13:25 boinc_mmap_file
[2025-10-13 13:25:11] -rw-r--r-- 1 boinc boinc        27 Oct 13 13:25 wrapper_checkpoint.txt
[2025-10-13 13:25:11] -rw------- 1 boinc boinc      5010 Oct 13 13:25 pilotlog.txt
[2025-10-13 13:25:11] -rw------- 1 boinc boinc    709171 Oct 13 13:25 log.46676269._088961.job.log.1
[2025-10-13 13:25:11] -rw------- 1 boinc boinc       357 Oct 13 13:25 output.list
[2025-10-13 13:25:11] -rw-r--r-- 1 boinc boinc       620 Oct 13 13:25 runtime_log
[2025-10-13 13:25:11] -rw------- 1 boinc boinc    962560 Oct 13 13:25 result.tar.gz
[2025-10-13 13:25:11] -rw-r--r-- 1 boinc boinc      8782 Oct 13 13:25 runtime_log.err
[2025-10-13 13:25:11] -rw------- 1 boinc boinc       659 Oct 13 13:25 aIbMDml5HS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmozUMDm4V1oLn.diag
[2025-10-13 13:25:11] -rw-r--r-- 1 boinc boinc      5900 Oct 13 13:25 stderr.txt
[2025-10-13 13:25:11] HITS file was successfully produced:
[2025-10-13 13:25:11] -rw------- 1 boinc boinc 190828666 Oct 13 13:23 shared/HITS.pool.root.1
[2025-10-13 13:25:11]  *** Contents of shared directory: ***
[2025-10-13 13:25:11] total 402692
[2025-10-13 13:25:11] -rw-r--r-- 2 boinc boinc 219960098 Oct 13 12:03 ATLAS.root_0
[2025-10-13 13:25:11] -rw-r--r-- 2 boinc boinc    569679 Oct 13 12:03 input.tar.gz
[2025-10-13 13:25:11] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:03 start_atlas.sh
[2025-10-13 13:25:11] -rw------- 1 boinc boinc 190828666 Oct 13 13:23 HITS.pool.root.1
[2025-10-13 13:25:11] -rw------- 1 boinc boinc    962560 Oct 13 13:25 result.tar.gz
13:25:33 (3594228): run_atlas exited; CPU time 13785.181160
13:25:33 (3594228): called boinc_finish(0)

</stderr_txt>
]]>

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