Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:06:18 (4075582): wrapper (7.7.26015): starting
12:06:18 (4075582): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 12:06:18] Arguments: --nthreads 4
[2025-10-13 12:06:18] Threads: 4
[2025-10-13 12:06:18] Checking for CVMFS
[2025-10-13 12:06:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 12:06:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 12:06:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 12:06:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 12:06:19] 2.9.2.0 2032506 5605 104144 151656 1 57 26459727 36864001 0 130560 0 5042620 99.992 189519 904 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 12:06:19] CVMFS is ok
[2025-10-13 12:06:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 12:06:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 12:06:19] Further information can be found at the LHC@home message board.
[2025-10-13 12:06:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 12:06:19] Checking for apptainer binary...
[2025-10-13 12:06:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 12:06:19] Running /usr/bin/apptainer --version
[2025-10-13 12:06:19] apptainer version 1.4.1-1.1
[2025-10-13 12:06:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 12:06:19] madmaxA277
[2025-10-13 12:06:19] apptainer works
[2025-10-13 12:06:19] Set ATHENA_PROC_NUMBER=4
[2025-10-13 12:06:19] Set ATHENA_CORE_NUMBER=4
[2025-10-13 12:06:19] Starting ATLAS job with PandaID=6840748912
[2025-10-13 12:06:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:18:55]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:18:55] 2025-10-13 11:18:25,203 | INFO     | cat /etc/os-release:
[2025-10-13 13:18:55] NAME="CentOS Linux"
[2025-10-13 13:18:55] VERSION="7 (Core)"
[2025-10-13 13:18:55] ID="centos"
[2025-10-13 13:18:55] ID_LIKE="rhel fedora"
[2025-10-13 13:18:55] VERSION_ID="7"
[2025-10-13 13:18:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:18:55] ANSI_COLOR="0;31"
[2025-10-13 13:18:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:18:55] HOME_URL="https://www.centos.org/"
[2025-10-13 13:18:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:18:55] 
[2025-10-13 13:18:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:18:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:18:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:18:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:18:55] 
[2025-10-13 13:18:55] 2025-10-13 11:18:25,203 | INFO     | ***************************************
[2025-10-13 13:18:55] 2025-10-13 11:18:25,706 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 13:18:55] 2025-10-13 11:18:25,720 | INFO     | sufficient remaining disk space (333426196480 B)
[2025-10-13 13:18:55] 2025-10-13 11:18:25,720 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:18:55] 2025-10-13 11:18:25,721 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:18:55] 2025-10-13 11:18:25,721 | INFO     | update_server=False
[2025-10-13 13:18:55] 2025-10-13 11:18:25,721 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:18:55] 2025-10-13 11:18:25,721 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:18:55] 2025-10-13 11:18:25,721 | INFO     | aborting loop
[2025-10-13 13:18:55] 2025-10-13 11:18:25,721 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:18:55] 2025-10-13 11:18:25,917 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:18:55] 2025-10-13 11:18:26,397 | INFO     | all data control threads have been joined
[2025-10-13 13:18:55] 2025-10-13 11:18:26,725 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:18:55] 2025-10-13 11:18:26,726 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:18:55] 2025-10-13 11:18:26,726 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:18:55] 2025-10-13 11:18:26,908 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:18:55] 2025-10-13 11:18:26,914 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:18:55] 2025-10-13 11:18:27,044 | INFO     | all payload control threads have been joined
[2025-10-13 13:18:55] 2025-10-13 11:18:27,270 | INFO     | all job control threads have been joined
[2025-10-13 13:18:55] 2025-10-13 11:18:27,402 | INFO     | [data] control thread has finished
[2025-10-13 13:18:55] 2025-10-13 11:18:27,669 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:18:55] 2025-10-13 11:18:27,885 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:18:55] 2025-10-13 11:18:27,914 | INFO     | [job] validate thread has finished
[2025-10-13 13:18:55] 2025-10-13 11:18:27,922 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:18:55] 2025-10-13 11:18:28,049 | INFO     | [payload] control thread has finished
[2025-10-13 13:18:55] 2025-10-13 11:18:28,109 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:18:55] 2025-10-13 11:18:28,140 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:18:55] 2025-10-13 11:18:28,212 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:18:55] 2025-10-13 11:18:28,275 | INFO     | [job] control thread has finished
[2025-10-13 13:18:55] 2025-10-13 11:18:28,556 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:18:55] 2025-10-13 11:18:31,759 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:18:55] 2025-10-13 11:18:32,561 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:18:55] 2025-10-13 11:18:32,768 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140083485665088)>', '<ExcThread(monitor, started 140082640058112)>']
[2025-10-13 13:18:55] 2025-10-13 11:18:37,793 | INFO     | all workflow threads have been joined
[2025-10-13 13:18:55] 2025-10-13 11:18:37,793 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:18:55] 2025-10-13 11:18:37,793 | INFO     | traces error code: 0
[2025-10-13 13:18:55] 2025-10-13 11:18:37,793 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:18:55] 2025-10-13 11:18:55,442 | INFO     | PID=4079377 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 13:18:55] 2025-10-13 11:18:55,443 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:18:55] 2025-10-13 11:18:55,443 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:18:55] 2025-10-13 11:18:55,443 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:18:55] 2025-10-13 11:18:55,443 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:18:55] 2025-10-13 11:18:55,443 | INFO     | [monitor] control thread has ended
[2025-10-13 13:18:55] 2025-10-13 11:18:55,524 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:18:55] 2025-10-13 11:18:55,528 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:18:55] 2025-10-13 11:18:55,532 [wrapper] pilotpid: 4079377
[2025-10-13 13:18:55] 2025-10-13 11:18:55,536 [wrapper] Pilot exit status: 0
[2025-10-13 13:18:55] 2025-10-13 11:18:55,546 [wrapper] pandaids: 6840748912
[2025-10-13 13:18:55] 2025-10-13 11:18:55,567 [wrapper] cleanup supervisor_pilot 4097312 4079378
[2025-10-13 13:18:55] 2025-10-13 11:18:55,571 [wrapper] Test setup, not cleaning
[2025-10-13 13:18:55] 2025-10-13 11:18:55,575 [wrapper] apfmon messages muted
[2025-10-13 13:18:55] 2025-10-13 11:18:55,579 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:18:55] 2025-10-13 11:18:55,582 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:18:55]  *** Error codes and diagnostics ***
[2025-10-13 13:18:55]     "exeErrorCode": 0,
[2025-10-13 13:18:55]     "exeErrorDiag": "",
[2025-10-13 13:18:55]     "pilotErrorCode": 0,
[2025-10-13 13:18:55]     "pilotErrorDiag": "",
[2025-10-13 13:18:55]  *** Listing of results directory ***
[2025-10-13 13:18:55] total 412700
[2025-10-13 13:18:55] -rw-r--r-- 1 boinc boinc    557409 Oct 12 22:08 pilot3.tar.gz
[2025-10-13 13:18:55] -rwx------ 1 boinc boinc     36292 Oct 12 22:20 runpilot2-wrapper.sh
[2025-10-13 13:18:55] -rw-r--r-- 1 boinc boinc      5112 Oct 12 22:20 queuedata.json
[2025-10-13 13:18:55] -rw-r--r-- 1 boinc boinc       100 Oct 13 12:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:18:55] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 12:06 run_atlas
[2025-10-13 13:18:55] -rw-r--r-- 1 boinc boinc       105 Oct 13 12:06 job.xml
[2025-10-13 13:18:55] -rw-r--r-- 2 boinc boinc 221174671 Oct 13 12:06 EVNT.46676267._004491.pool.root.1
[2025-10-13 13:18:55] -rw-r--r-- 2 boinc boinc    569678 Oct 13 12:06 input.tar.gz
[2025-10-13 13:18:55] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:06 start_atlas.sh
[2025-10-13 13:18:55] drwxrwx--x 2 boinc boinc      4096 Oct 13 12:06 shared
[2025-10-13 13:18:55] -rw-r--r-- 1 boinc boinc         0 Oct 13 12:06 boinc_setup_complete
[2025-10-13 13:18:55] -rw-r--r-- 1 boinc boinc      6373 Oct 13 12:06 init_data.xml
[2025-10-13 13:18:55] -rw-r--r-- 1 boinc boinc         0 Oct 13 12:06 boinc_lockfile
[2025-10-13 13:18:55] -rw-r--r-- 1 boinc boinc      2550 Oct 13 12:06 pandaJob.out
[2025-10-13 13:18:55] -rw------- 1 boinc boinc    972849 Oct 13 12:06 agis_schedconf.cvmfs.json
[2025-10-13 13:18:55] -rw------- 1 boinc boinc   1560580 Oct 13 12:06 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:18:55] drwx------ 5 boinc boinc      4096 Oct 13 12:06 pilot3
[2025-10-13 13:18:55] -rw------- 1 boinc boinc 195716557 Oct 13 13:17 HITS.46676269._088478.pool.root.1
[2025-10-13 13:18:55] -rw-r--r-- 1 boinc boinc       529 Oct 13 13:17 boinc_task_state.xml
[2025-10-13 13:18:55] -rw------- 1 boinc boinc      1032 Oct 13 13:18 memory_monitor_summary.json
[2025-10-13 13:18:55] -rw------- 1 boinc boinc    271085 Oct 13 13:18 log.46676269._088478.job.log.tgz.1
[2025-10-13 13:18:55] -rw------- 1 boinc boinc      7766 Oct 13 13:18 heartbeat.json
[2025-10-13 13:18:55] -rw-r--r-- 1 boinc boinc      8192 Oct 13 13:18 boinc_mmap_file
[2025-10-13 13:18:55] -rw-r--r-- 1 boinc boinc        27 Oct 13 13:18 wrapper_checkpoint.txt
[2025-10-13 13:18:55] -rw------- 1 boinc boinc       747 Oct 13 13:18 pilotlog.txt
[2025-10-13 13:18:55] -rw------- 1 boinc boinc        95 Oct 13 13:18 pilot_heartbeat.json
[2025-10-13 13:18:55] -rw------- 1 boinc boinc    640477 Oct 13 13:18 log.46676269._088478.job.log.1
[2025-10-13 13:18:55] -rw------- 1 boinc boinc       357 Oct 13 13:18 output.list
[2025-10-13 13:18:55] -rw-r--r-- 1 boinc boinc       620 Oct 13 13:18 runtime_log
[2025-10-13 13:18:55] -rw------- 1 boinc boinc    931840 Oct 13 13:18 result.tar.gz
[2025-10-13 13:18:55] -rw-r--r-- 1 boinc boinc      8797 Oct 13 13:18 runtime_log.err
[2025-10-13 13:18:55] -rw------- 1 boinc boinc       662 Oct 13 13:18 FKNNDmnjHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOQlNDmRq7j1m.diag
[2025-10-13 13:18:55] -rw-r--r-- 1 boinc boinc      8791 Oct 13 13:18 stderr.txt
[2025-10-13 13:18:55] HITS file was successfully produced:
[2025-10-13 13:18:55] -rw------- 1 boinc boinc 195716557 Oct 13 13:17 shared/HITS.pool.root.1
[2025-10-13 13:18:55]  *** Contents of shared directory: ***
[2025-10-13 13:18:55] total 408620
[2025-10-13 13:18:55] -rw-r--r-- 2 boinc boinc 221174671 Oct 13 12:06 ATLAS.root_0
[2025-10-13 13:18:55] -rw-r--r-- 2 boinc boinc    569678 Oct 13 12:06 input.tar.gz
[2025-10-13 13:18:55] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:06 start_atlas.sh
[2025-10-13 13:18:55] -rw------- 1 boinc boinc 195716557 Oct 13 13:17 HITS.pool.root.1
[2025-10-13 13:18:55] -rw------- 1 boinc boinc    931840 Oct 13 13:18 result.tar.gz
13:18:56 (4075582): run_atlas exited; CPU time 16154.238539
13:18:56 (4075582): called boinc_finish(0)

</stderr_txt>
]]>

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