Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:01:46 (3466340): wrapper (7.7.26015): starting
11:01:46 (3466340): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 11:01:46] Arguments: --nthreads 3
[2025-10-13 11:01:46] Threads: 3
[2025-10-13 11:01:46] Checking for CVMFS
[2025-10-13 11:01:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 11:01:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 11:01:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 11:01:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 11:01:46] 2.9.2.0 2127501 4315 82076 151654 1 57 29116777 36864000 0 130560 0 3518902 99.988 272283 1223 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 11:01:46] CVMFS is ok
[2025-10-13 11:01:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 11:01:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 11:01:46] Further information can be found at the LHC@home message board.
[2025-10-13 11:01:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 11:01:46] Checking for apptainer binary...
[2025-10-13 11:01:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 11:01:46] Running /usr/bin/apptainer --version
[2025-10-13 11:01:46] apptainer version 1.4.1-1.1
[2025-10-13 11:01:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 11:01:46] thA385
[2025-10-13 11:01:46] apptainer works
[2025-10-13 11:01:46] Set ATHENA_PROC_NUMBER=3
[2025-10-13 11:01:46] Set ATHENA_CORE_NUMBER=3
[2025-10-13 11:01:46] Starting ATLAS job with PandaID=6840749016
[2025-10-13 11:01:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:26:05]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:26:05] 2025-10-13 10:25:04,778 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:26:05] 2025-10-13 10:25:04,778 | INFO     | update_server=False
[2025-10-13 12:26:05] 2025-10-13 10:25:04,778 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:26:05] 2025-10-13 10:25:04,779 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:26:05] 2025-10-13 10:25:04,779 | INFO     | aborting loop
[2025-10-13 12:26:05] 2025-10-13 10:25:04,779 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:26:05] 2025-10-13 10:25:04,824 | INFO     | all data control threads have been joined
[2025-10-13 12:26:05] 2025-10-13 10:25:04,884 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:26:05] 2025-10-13 10:25:05,489 | INFO     | all payload control threads have been joined
[2025-10-13 12:26:05] 2025-10-13 10:25:05,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:26:05] 2025-10-13 10:25:05,781 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:26:05] 2025-10-13 10:25:05,784 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:26:05] 2025-10-13 10:25:05,784 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:26:05] 2025-10-13 10:25:05,830 | INFO     | [data] control thread has finished
[2025-10-13 12:26:05] 2025-10-13 10:25:06,035 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:26:05] 2025-10-13 10:25:06,334 | INFO     | all job control threads have been joined
[2025-10-13 12:26:05] 2025-10-13 10:25:06,490 | INFO     | [payload] control thread has finished
[2025-10-13 12:26:05] 2025-10-13 10:25:06,699 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:26:05] 2025-10-13 10:25:06,734 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:26:05] 2025-10-13 10:25:06,755 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:26:05] 2025-10-13 10:25:06,800 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:26:05] 2025-10-13 10:25:06,878 | INFO     | [job] validate thread has finished
[2025-10-13 12:26:05] 2025-10-13 10:25:06,890 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:26:05] 2025-10-13 10:25:07,044 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:26:05] 2025-10-13 10:25:07,225 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:26:05] 2025-10-13 10:25:07,340 | INFO     | [job] control thread has finished
[2025-10-13 12:26:05] 2025-10-13 10:25:09,722 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:26:05] 2025-10-13 10:25:34,854 | INFO     | PID=3470057 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 12:26:05] 2025-10-13 10:25:34,855 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:26:05] 2025-10-13 10:25:34,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:26:05] 2025-10-13 10:25:34,855 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:26:05] 2025-10-13 10:25:59,214 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:26:05] 2025-10-13 10:26:00,220 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140492136195904)>', '<ExcThread(monitor, started 140491517581056)>']
[2025-10-13 12:26:05] 2025-10-13 10:26:00,986 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:26:05] 2025-10-13 10:26:00,986 | INFO     | [monitor] control thread has ended
[2025-10-13 12:26:05] 2025-10-13 10:26:05,246 | INFO     | all workflow threads have been joined
[2025-10-13 12:26:05] 2025-10-13 10:26:05,246 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:26:05] 2025-10-13 10:26:05,246 | INFO     | traces error code: 0
[2025-10-13 12:26:05] 2025-10-13 10:26:05,246 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:26:05] 2025-10-13 10:26:05,294 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:26:05] 2025-10-13 10:26:05,297 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:26:05] 2025-10-13 10:26:05,299 [wrapper] pilotpid: 3470057
[2025-10-13 12:26:05] 2025-10-13 10:26:05,302 [wrapper] Pilot exit status: 0
[2025-10-13 12:26:05] 2025-10-13 10:26:05,310 [wrapper] pandaids: 6840749016
[2025-10-13 12:26:05] 2025-10-13 10:26:05,328 [wrapper] cleanup supervisor_pilot 3488849 3470058
[2025-10-13 12:26:05] 2025-10-13 10:26:05,331 [wrapper] Test setup, not cleaning
[2025-10-13 12:26:05] 2025-10-13 10:26:05,333 [wrapper] apfmon messages muted
[2025-10-13 12:26:05] 2025-10-13 10:26:05,336 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:26:05] 2025-10-13 10:26:05,338 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:26:05]  *** Error codes and diagnostics ***
[2025-10-13 12:26:05]     "exeErrorCode": 0,
[2025-10-13 12:26:05]     "exeErrorDiag": "",
[2025-10-13 12:26:05]     "pilotErrorCode": 0,
[2025-10-13 12:26:05]     "pilotErrorDiag": "",
[2025-10-13 12:26:05]  *** Listing of results directory ***
[2025-10-13 12:26:05] total 409056
[2025-10-13 12:26:05] -rw-r--r-- 1 boinc boinc    557409 Oct 12 22:08 pilot3.tar.gz
[2025-10-13 12:26:05] -rwx------ 1 boinc boinc     36292 Oct 12 22:22 runpilot2-wrapper.sh
[2025-10-13 12:26:05] -rw-r--r-- 1 boinc boinc      5112 Oct 12 22:22 queuedata.json
[2025-10-13 12:26:05] -rw-r--r-- 1 boinc boinc       100 Oct 13 11:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:26:05] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 11:01 run_atlas
[2025-10-13 12:26:05] -rw-r--r-- 1 boinc boinc       105 Oct 13 11:01 job.xml
[2025-10-13 12:26:05] -rw-r--r-- 2 boinc boinc 221207015 Oct 13 11:01 EVNT.46676267._004495.pool.root.1
[2025-10-13 12:26:05] -rw-r--r-- 2 boinc boinc    569678 Oct 13 11:01 input.tar.gz
[2025-10-13 12:26:05] -rw-r--r-- 2 boinc boinc     15120 Oct 13 11:01 start_atlas.sh
[2025-10-13 12:26:05] drwxrwx--x 2 boinc boinc      4096 Oct 13 11:01 shared
[2025-10-13 12:26:05] -rw-r--r-- 1 boinc boinc         0 Oct 13 11:01 boinc_setup_complete
[2025-10-13 12:26:05] -rw-r--r-- 1 boinc boinc      6446 Oct 13 11:01 init_data.xml
[2025-10-13 12:26:05] -rw-r--r-- 1 boinc boinc         0 Oct 13 11:01 boinc_lockfile
[2025-10-13 12:26:05] -rw-r--r-- 1 boinc boinc      2549 Oct 13 11:01 pandaJob.out
[2025-10-13 12:26:05] -rw------- 1 boinc boinc    972857 Oct 13 11:01 agis_schedconf.cvmfs.json
[2025-10-13 12:26:05] -rw------- 1 boinc boinc   1560580 Oct 13 11:01 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:26:05] drwx------ 5 boinc boinc      4096 Oct 13 11:01 pilot3
[2025-10-13 12:26:05] -rw------- 1 boinc boinc 191777412 Oct 13 12:24 HITS.46676269._088582.pool.root.1
[2025-10-13 12:26:05] -rw-r--r-- 1 boinc boinc       529 Oct 13 12:24 boinc_task_state.xml
[2025-10-13 12:26:05] -rw------- 1 boinc boinc      1019 Oct 13 12:24 memory_monitor_summary.json
[2025-10-13 12:26:05] -rw------- 1 boinc boinc    269515 Oct 13 12:24 log.46676269._088582.job.log.tgz.1
[2025-10-13 12:26:05] -rw------- 1 boinc boinc      7749 Oct 13 12:25 heartbeat.json
[2025-10-13 12:26:05] -rw------- 1 boinc boinc        95 Oct 13 12:25 pilot_heartbeat.json
[2025-10-13 12:26:05] -rw-r--r-- 1 boinc boinc        27 Oct 13 12:25 wrapper_checkpoint.txt
[2025-10-13 12:26:05] -rw-r--r-- 1 boinc boinc      8192 Oct 13 12:25 boinc_mmap_file
[2025-10-13 12:26:05] -rw------- 1 boinc boinc      4752 Oct 13 12:26 pilotlog.txt
[2025-10-13 12:26:05] -rw------- 1 boinc boinc    732365 Oct 13 12:26 log.46676269._088582.job.log.1
[2025-10-13 12:26:05] -rw------- 1 boinc boinc       357 Oct 13 12:26 output.list
[2025-10-13 12:26:05] -rw-r--r-- 1 boinc boinc       620 Oct 13 12:26 runtime_log
[2025-10-13 12:26:05] -rw------- 1 boinc boinc   1024000 Oct 13 12:26 result.tar.gz
[2025-10-13 12:26:05] -rw-r--r-- 1 boinc boinc      8777 Oct 13 12:26 runtime_log.err
[2025-10-13 12:26:05] -rw------- 1 boinc boinc       658 Oct 13 12:26 3lyNDmulHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeQlNDmgxWeNo.diag
[2025-10-13 12:26:05] -rw-r--r-- 1 boinc boinc      7518 Oct 13 12:26 stderr.txt
[2025-10-13 12:26:05] HITS file was successfully produced:
[2025-10-13 12:26:05] -rw------- 1 boinc boinc 191777412 Oct 13 12:24 shared/HITS.pool.root.1
[2025-10-13 12:26:05]  *** Contents of shared directory: ***
[2025-10-13 12:26:05] total 404892
[2025-10-13 12:26:05] -rw-r--r-- 2 boinc boinc 221207015 Oct 13 11:01 ATLAS.root_0
[2025-10-13 12:26:05] -rw-r--r-- 2 boinc boinc    569678 Oct 13 11:01 input.tar.gz
[2025-10-13 12:26:05] -rw-r--r-- 2 boinc boinc     15120 Oct 13 11:01 start_atlas.sh
[2025-10-13 12:26:05] -rw------- 1 boinc boinc 191777412 Oct 13 12:24 HITS.pool.root.1
[2025-10-13 12:26:05] -rw------- 1 boinc boinc   1024000 Oct 13 12:26 result.tar.gz
12:26:06 (3466340): run_atlas exited; CPU time 14272.682574
12:26:06 (3466340): called boinc_finish(0)

</stderr_txt>
]]>

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