Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:33:08 (21543): wrapper (7.7.26015): starting
20:33:08 (21543): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:33:08] Arguments: --nthreads 8
[2025-10-12 20:33:08] Threads: 8
[2025-10-12 20:33:08] Checking for CVMFS
[2025-10-12 20:33:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:33:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:33:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:33:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:33:09] 2.11.2.0 8539 53640 132556 151642 1 59 11644987 18432001 1833 130560 0 50912700 99.975 2291188 37387 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 20:33:09] CVMFS is ok
[2025-10-12 20:33:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:33:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:33:09] Further information can be found at the LHC@home message board.
[2025-10-12 20:33:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:33:09] Checking for apptainer binary...
[2025-10-12 20:33:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:33:09] Running /usr/bin/apptainer --version
[2025-10-12 20:33:09] apptainer version 1.3.2-1.el7
[2025-10-12 20:33:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:33:10] c-206-1.aglt2.org
[2025-10-12 20:33:10] apptainer works
[2025-10-12 20:33:10] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:33:10] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:33:10] Starting ATLAS job with PandaID=6840748980
[2025-10-12 20:33:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:25:42]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:25:42] 2025-10-13 03:25:00,601 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:25:42] 2025-10-13 03:25:00,601 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:25:42] 2025-10-13 03:25:00,603 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:25:42] 2025-10-13 03:25:00,604 | INFO     | sum of square deviations: 1496660620.0
[2025-10-12 23:25:42] 2025-10-13 03:25:00,605 | INFO     | sum of deviations: -4316114170.000001
[2025-10-12 23:25:42] 2025-10-13 03:25:00,605 | INFO     | mean x: 1760320747.0
[2025-10-12 23:25:42] 2025-10-13 03:25:00,605 | INFO     | mean y: 2511231.7041420117
[2025-10-12 23:25:42] 2025-10-13 03:25:00,605 | INFO     | -- intersect: 5078976275.510591
[2025-10-12 23:25:42] 2025-10-13 03:25:00,605 | INFO     | intersect: 5078976275.510591
[2025-10-12 23:25:42] 2025-10-13 03:25:00,605 | INFO     | chi2: 1.9526390916059797
[2025-10-12 23:25:42] 2025-10-13 03:25:00,606 | INFO     | sum of square deviations: 1367709365.0
[2025-10-12 23:25:42] 2025-10-13 03:25:00,606 | INFO     | sum of deviations: 7018516680.500005
[2025-10-12 23:25:42] 2025-10-13 03:25:00,606 | INFO     | mean x: 1760320594.5
[2025-10-12 23:25:42] 2025-10-13 03:25:00,606 | INFO     | mean y: 2524315.9085365855
[2025-10-12 23:25:42] 2025-10-13 03:25:00,607 | INFO     | -- intersect: -9030710208.68356
[2025-10-12 23:25:42] 2025-10-13 03:25:00,607 | INFO     | intersect: -9030710208.68356
[2025-10-12 23:25:42] 2025-10-13 03:25:00,607 | INFO     | chi2: 1.1731091236182871
[2025-10-12 23:25:42] 2025-10-13 03:25:00,607 | INFO     | current chi2=1.1731091236182871 (change=39.92186632638577 %)
[2025-10-12 23:25:42] 2025-10-13 03:25:00,607 | INFO     | sum of square deviations: 1246386160.0
[2025-10-12 23:25:42] 2025-10-13 03:25:00,608 | INFO     | sum of deviations: 6854392429.0
[2025-10-12 23:25:42] 2025-10-13 03:25:00,608 | INFO     | mean x: 1760320442.0
[2025-10-12 23:25:42] 2025-10-13 03:25:00,608 | INFO     | mean y: 2524109.937106918
[2025-10-12 23:25:42] 2025-10-13 03:25:00,608 | INFO     | -- intersect: -9678205263.902164
[2025-10-12 23:25:42] 2025-10-13 03:25:00,609 | INFO     | intersect: -9678205263.902164
[2025-10-12 23:25:42] 2025-10-13 03:25:00,609 | INFO     | chi2: 1.1738626009443718
[2025-10-12 23:25:42] 2025-10-13 03:25:00,609 | INFO     | current chi2=1.1738626009443718 (change=-0.06422909096134798 %)
[2025-10-12 23:25:42] 2025-10-13 03:25:00,609 | INFO     | right removable region: 158
[2025-10-12 23:25:42] 2025-10-13 03:25:00,609 | INFO     | sum of square deviations: 1367709365.0
[2025-10-12 23:25:42] 2025-10-13 03:25:00,610 | INFO     | sum of deviations: -23410658110.5
[2025-10-12 23:25:42] 2025-10-13 03:25:00,610 | INFO     | mean x: 1760320899.5
[2025-10-12 23:25:42] 2025-10-13 03:25:00,610 | INFO     | mean y: 2533451.75
[2025-10-12 23:25:42] 2025-10-13 03:25:00,610 | INFO     | -- intersect: 30133401746.97611
[2025-10-12 23:25:42] 2025-10-13 03:25:00,610 | INFO     | intersect: 30133401746.97611
[2025-10-12 23:25:42] 2025-10-13 03:25:00,611 | INFO     | chi2: 0.8511085519966706
[2025-10-12 23:25:42] 2025-10-13 03:25:00,611 | INFO     | current chi2=0.8511085519966706 (change=56.412398191994484 %)
[2025-10-12 23:25:42] 2025-10-13 03:25:00,611 | INFO     | sum of square deviations: 1246386160.0
[2025-10-12 23:25:42] 2025-10-13 03:25:00,612 | INFO     | sum of deviations: -23588637353.0
[2025-10-12 23:25:42] 2025-10-13 03:25:00,612 | INFO     | mean x: 1760321052.0
[2025-10-12 23:25:42] 2025-10-13 03:25:00,612 | INFO     | mean y: 2533625.522012579
[2025-10-12 23:25:42] 2025-10-13 03:25:00,612 | INFO     | -- intersect: 33317710135.88976
[2025-10-12 23:25:42] 2025-10-13 03:25:00,612 | INFO     | intersect: 33317710135.88976
[2025-10-12 23:25:42] 2025-10-13 03:25:00,612 | INFO     | chi2: 0.8379915897501874
[2025-10-12 23:25:42] 2025-10-13 03:25:00,613 | INFO     | current chi2=0.8379915897501874 (change=1.5411620780582274 %)
[2025-10-12 23:25:42] 2025-10-13 03:25:00,613 | INFO     | left removable region: 20
[2025-10-12 23:25:42] 2025-10-13 03:25:00,613 | INFO     | sum of square deviations: 814878534.5
[2025-10-12 23:25:42] 2025-10-13 03:25:00,613 | INFO     | sum of deviations: -8655588686.500002
[2025-10-12 23:25:42] 2025-10-13 03:25:00,614 | INFO     | mean x: 1760321021.5
[2025-10-12 23:25:42] 2025-10-13 03:25:00,614 | INFO     | mean y: 2543795.0362318843
[2025-10-12 23:25:42] 2025-10-13 03:25:00,614 | INFO     | -- intersect: 18700563282.876266
[2025-10-12 23:25:42] 2025-10-13 03:25:00,614 | INFO     | intersect: 18700563282.876266
[2025-10-12 23:25:42] 2025-10-13 03:25:00,614 | INFO     | chi2: 0.03448263092698726
[2025-10-12 23:25:42] 2025-10-13 03:25:00,614 | INFO     | -- intersect: 18700563282.876266
[2025-10-12 23:25:42] 2025-10-13 03:25:00,614 | INFO     | current memory leak: -10.62 B/s (using 138 data points, chi2=0.03)
[2025-10-12 23:25:42] 2025-10-13 03:25:00,615 | INFO     | could have reported an average CPU frequency of 2448 MHz (9 samples)
[2025-10-12 23:25:42] 2025-10-13 03:25:00,615 | INFO     | ..............................
[2025-10-12 23:25:42] 2025-10-13 03:25:00,615 | INFO     | . Timing measurements:
[2025-10-12 23:25:42] 2025-10-13 03:25:00,615 | INFO     | . get job = 0 s
[2025-10-12 23:25:42] 2025-10-13 03:25:00,615 | INFO     | . initial setup = 2 s
[2025-10-12 23:25:42] 2025-10-13 03:25:00,615 | INFO     | . payload setup = 4 s
[2025-10-12 23:25:42] 2025-10-13 03:25:00,615 | INFO     | . stage-in = 0 s
[2025-10-12 23:25:42] 2025-10-13 03:25:00,615 | INFO     | . payload execution = 10271 s
[2025-10-12 23:25:42] 2025-10-13 03:25:00,615 | INFO     | . stage-out = 0 s
[2025-10-12 23:25:42] 2025-10-13 03:25:00,616 | INFO     | . log creation = 0 s
[2025-10-12 23:25:42] 2025-10-13 03:25:00,616 | INFO     | ..............................
[2025-10-12 23:25:42] 2025-10-13 03:25:01,162 | INFO     | 
[2025-10-12 23:25:42] 2025-10-13 03:25:01,163 | INFO     | job summary report
[2025-10-12 23:25:42] 2025-10-13 03:25:01,163 | INFO     | --------------------------------------------------
[2025-10-12 23:25:42] 2025-10-13 03:25:01,163 | INFO     | PanDA job id: 6840748980
[2025-10-12 23:25:42] 2025-10-13 03:25:01,163 | INFO     | task id: 46676269
[2025-10-12 23:25:42] 2025-10-13 03:25:01,163 | INFO     | errors: (none)
[2025-10-12 23:25:42] 2025-10-13 03:25:01,163 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:25:42] 2025-10-13 03:25:01,164 | INFO     | pilot state: finished 
[2025-10-12 23:25:42] 2025-10-13 03:25:01,164 | INFO     | transexitcode: 0
[2025-10-12 23:25:42] 2025-10-13 03:25:01,164 | INFO     | exeerrorcode: 0
[2025-10-12 23:25:42] 2025-10-13 03:25:01,164 | INFO     | exeerrordiag: 
[2025-10-12 23:25:42] 2025-10-13 03:25:01,164 | INFO     | exitcode: 0
[2025-10-12 23:25:42] 2025-10-13 03:25:01,164 | INFO     | exitmsg: OK
[2025-10-12 23:25:42] 2025-10-13 03:25:01,165 | INFO     | cpuconsumptiontime: 77495 s
[2025-10-12 23:25:42] 2025-10-13 03:25:01,165 | INFO     | nevents: 400
[2025-10-12 23:25:42] 2025-10-13 03:25:01,165 | INFO     | neventsw: 0
[2025-10-12 23:25:42] 2025-10-13 03:25:01,165 | INFO     | pid: 31683
[2025-10-12 23:25:42] 2025-10-13 03:25:01,165 | INFO     | pgrp: 31683
[2025-10-12 23:25:42] 2025-10-13 03:25:01,165 | INFO     | corecount: 8
[2025-10-12 23:25:42] 2025-10-13 03:25:01,166 | INFO     | event service: False
[2025-10-12 23:25:42] 2025-10-13 03:25:01,166 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 10279: 2377892, 10281: 2386890, 10283: 2386946, 10286: 2387332}
[2025-10-12 23:25:42] 2025-10-13 03:25:01,166 | INFO     | --------------------------------------------------
[2025-10-12 23:25:42] 2025-10-13 03:25:01,166 | INFO     | 
[2025-10-12 23:25:42] 2025-10-13 03:25:01,166 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 23:25:42] 2025-10-13 03:25:01,184 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:25:42] 2025-10-13 03:25:01,184 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:25:42] 2025-10-13 03:25:01,184 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:25:42] 2025-10-13 03:25:01,184 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:25:42] 2025-10-13 03:25:01,184 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:25:42] 2025-10-13 03:25:01,184 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:25:42] 2025-10-13 03:25:01,185 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:25:42] 2025-10-13 03:25:01,185 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:25:42] 2025-10-13 03:25:01,185 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:25:42] 2025-10-13 03:25:01,185 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:25:42] 2025-10-13 03:25:01,185 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:25:42] 2025-10-13 03:25:01,185 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:25:42] 2025-10-13 03:25:01,185 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:25:42] 2025-10-13 03:25:01,185 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:25:42] 2025-10-13 03:25:01,185 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:25:42] 2025-10-13 03:25:01,186 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:25:42] 2025-10-13 03:25:01,186 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:25:42] 2025-10-13 03:25:01,186 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:25:42] 2025-10-13 03:25:01,186 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:25:42] 2025-10-13 03:25:01,186 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:25:42] 2025-10-13 03:25:01,186 | INFO     | job 6840748980 has completed (purged errors)
[2025-10-12 23:25:42] 2025-10-13 03:25:01,186 | INFO     | overall cleanup function is called
[2025-10-12 23:25:42] 2025-10-13 03:25:02,193 | INFO     | --- collectZombieJob: --- 10, [31683]
[2025-10-12 23:25:42] 2025-10-13 03:25:02,193 | INFO     | zombie collector waiting for pid 31683
[2025-10-12 23:25:42] 2025-10-13 03:25:02,193 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:25:42] 2025-10-13 03:25:02,193 | INFO     | collected zombie processes
[2025-10-12 23:25:42] 2025-10-13 03:25:02,193 | INFO     | will attempt to kill all subprocesses of pid=31683
[2025-10-12 23:25:42] 2025-10-13 03:25:02,301 | INFO     | process IDs to be killed: [31683] (in reverse order)
[2025-10-12 23:25:42] 2025-10-13 03:25:02,345 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:25:42] 2025-10-13 03:25:02,345 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:25:42] 2025-10-13 03:25:02,348 | INFO     | did not find any defunct processes belonging to 31683
[2025-10-12 23:25:42] 2025-10-13 03:25:02,350 | INFO     | did not find any defunct processes belonging to 31683
[2025-10-12 23:25:42] 2025-10-13 03:25:02,350 | INFO     | ready for new job
[2025-10-12 23:25:42] 2025-10-13 03:25:02,351 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:25:42] 2025-10-13 03:25:02,352 | INFO     | ***************************************
[2025-10-12 23:25:42] 2025-10-13 03:25:02,352 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:25:42] 2025-10-13 03:25:02,352 | INFO     | ***************************************
[2025-10-12 23:25:42] 2025-10-13 03:25:02,352 | INFO     | 
[2025-10-12 23:25:42] 2025-10-13 03:25:02,353 | INFO     | architecture information:
[2025-10-12 23:25:42] 2025-10-13 03:25:02,354 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:25:42] 2025-10-13 03:25:02,365 | INFO     | cat /etc/os-release:
[2025-10-12 23:25:42] NAME="CentOS Linux"
[2025-10-12 23:25:42] VERSION="7 (Core)"
[2025-10-12 23:25:42] ID="centos"
[2025-10-12 23:25:42] ID_LIKE="rhel fedora"
[2025-10-12 23:25:42] VERSION_ID="7"
[2025-10-12 23:25:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:25:42] ANSI_COLOR="0;31"
[2025-10-12 23:25:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:25:42] HOME_URL="https://www.centos.org/"
[2025-10-12 23:25:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:25:42] 
[2025-10-12 23:25:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:25:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:25:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:25:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:25:42] 
[2025-10-12 23:25:42] 2025-10-13 03:25:02,366 | INFO     | ***************************************
[2025-10-12 23:25:42] 2025-10-13 03:25:02,868 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 23:25:42] 2025-10-13 03:25:02,883 | INFO     | sufficient remaining disk space (28386000896 B)
[2025-10-12 23:25:42] 2025-10-13 03:25:02,883 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:25:42] 2025-10-13 03:25:02,883 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:25:42] 2025-10-13 03:25:02,883 | INFO     | update_server=False
[2025-10-12 23:25:42] 2025-10-13 03:25:02,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:25:42] 2025-10-13 03:25:02,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:25:42] 2025-10-13 03:25:02,884 | INFO     | aborting loop
[2025-10-12 23:25:42] 2025-10-13 03:25:03,117 | INFO     | all payload control threads have been joined
[2025-10-12 23:25:42] 2025-10-13 03:25:03,609 | INFO     | all data control threads have been joined
[2025-10-12 23:25:42] 2025-10-13 03:25:03,722 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:25:42] 2025-10-13 03:25:03,888 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:25:42] 2025-10-13 03:25:03,889 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:25:42] 2025-10-13 03:25:04,041 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:25:42] 2025-10-13 03:25:04,123 | INFO     | [payload] control thread has finished
[2025-10-12 23:25:42] 2025-10-13 03:25:04,134 | INFO     | all job control threads have been joined
[2025-10-12 23:25:42] 2025-10-13 03:25:04,492 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:25:42] 2025-10-13 03:25:04,615 | INFO     | [data] control thread has finished
[2025-10-12 23:25:42] 2025-10-13 03:25:04,640 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:25:42] 2025-10-13 03:25:04,953 | INFO     | [job] validate thread has finished
[2025-10-12 23:25:42] 2025-10-13 03:25:05,007 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:25:42] 2025-10-13 03:25:05,015 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:25:42] 2025-10-13 03:25:05,018 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:25:42] 2025-10-13 03:25:05,139 | INFO     | [job] control thread has finished
[2025-10-12 23:25:42] 2025-10-13 03:25:05,309 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:25:42] 2025-10-13 03:25:05,709 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:25:42] 2025-10-13 03:25:06,047 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:25:42] 2025-10-13 03:25:06,714 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:25:42] 2025-10-13 03:25:07,728 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:25:42] 2025-10-13 03:25:13,579 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:25:42] 2025-10-13 03:25:14,584 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:25:42] 2025-10-13 03:25:33,118 | INFO     | PID=25231 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 23:25:42] 2025-10-13 03:25:33,118 | INFO     | .. there are 2 such processes running
[2025-10-12 23:25:42] 2025-10-13 03:25:33,118 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:25:42] 2025-10-13 03:25:33,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:25:42] 2025-10-13 03:25:33,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:25:42] 2025-10-13 03:25:36,553 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:25:42] 2025-10-13 03:25:37,507 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139741832136512)>', '<ExcThread(monitor, started 139741604804352)>']
[2025-10-12 23:25:42] 2025-10-13 03:25:38,143 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:25:42] 2025-10-13 03:25:38,143 | INFO     | [monitor] control thread has ended
[2025-10-12 23:25:42] 2025-10-13 03:25:42,530 | INFO     | all workflow threads have been joined
[2025-10-12 23:25:42] 2025-10-13 03:25:42,531 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:25:42] 2025-10-13 03:25:42,531 | INFO     | traces error code: 0
[2025-10-12 23:25:42] 2025-10-13 03:25:42,531 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:25:42] 2025-10-13 03:25:42,625 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:25:42] 2025-10-13 03:25:42,627 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:25:42] 2025-10-13 03:25:42,629 [wrapper] pilotpid: 25231
[2025-10-12 23:25:42] 2025-10-13 03:25:42,631 [wrapper] Pilot exit status: 0
[2025-10-12 23:25:42] 2025-10-13 03:25:42,638 [wrapper] pandaids: 6840748980
[2025-10-12 23:25:42] 2025-10-13 03:25:42,662 [wrapper] cleanup supervisor_pilot  3078 25232
[2025-10-12 23:25:42] 2025-10-13 03:25:42,664 [wrapper] Test setup, not cleaning
[2025-10-12 23:25:42] 2025-10-13 03:25:42,666 [wrapper] apfmon messages muted
[2025-10-12 23:25:42] 2025-10-13 03:25:42,668 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:25:42] 2025-10-13 03:25:42,670 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:25:42]  *** Error codes and diagnostics ***
[2025-10-12 23:25:42]     "exeErrorCode": 0,
[2025-10-12 23:25:42]     "exeErrorDiag": "",
[2025-10-12 23:25:42]     "pilotErrorCode": 0,
[2025-10-12 23:25:42]     "pilotErrorDiag": "",
[2025-10-12 23:25:42]  *** Listing of results directory ***
[2025-10-12 23:25:42] total 411432
[2025-10-12 23:25:42] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 16:23 pilot3.tar.gz
[2025-10-12 23:25:42] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 16:24 queuedata.json
[2025-10-12 23:25:42] -rwx------ 1 boincer umatlas     36292 Oct 12 16:24 runpilot2-wrapper.sh
[2025-10-12 23:25:42] -rw-r--r-- 1 boincer umatlas       100 Oct 12 20:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:25:42] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 20:33 run_atlas
[2025-10-12 23:25:42] -rw-r--r-- 1 boincer umatlas       105 Oct 12 20:33 job.xml
[2025-10-12 23:25:42] -rw-r--r-- 2 boincer umatlas 221728279 Oct 12 20:33 EVNT.46676267._004494.pool.root.1
[2025-10-12 23:25:42] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:33 start_atlas.sh
[2025-10-12 23:25:42] drwxrwx--x 2 boincer umatlas      4096 Oct 12 20:33 shared
[2025-10-12 23:25:42] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 20:33 input.tar.gz
[2025-10-12 23:25:42] -rw-r--r-- 1 boincer umatlas         0 Oct 12 20:33 boinc_lockfile
[2025-10-12 23:25:42] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 20:33 pandaJob.out
[2025-10-12 23:25:42] -rw------- 1 boincer umatlas    975603 Oct 12 20:33 agis_schedconf.cvmfs.json
[2025-10-12 23:25:42] -rw------- 1 boincer umatlas   1560580 Oct 12 20:33 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:25:42] drwx------ 5 boincer umatlas      4096 Oct 12 20:33 pilot3
[2025-10-12 23:25:42] -rw-r--r-- 1 boincer umatlas      5949 Oct 12 23:19 init_data.xml
[2025-10-12 23:25:42] -rw------- 1 boincer umatlas 191962605 Oct 12 23:24 HITS.46676269._088546.pool.root.1
[2025-10-12 23:25:42] -rw------- 1 boincer umatlas        95 Oct 12 23:24 pilot_heartbeat.json
[2025-10-12 23:25:42] -rw------- 1 boincer umatlas      1053 Oct 12 23:24 memory_monitor_summary.json
[2025-10-12 23:25:42] -rw-r--r-- 1 boincer umatlas       530 Oct 12 23:24 boinc_task_state.xml
[2025-10-12 23:25:42] -rw------- 1 boincer umatlas    410009 Oct 12 23:24 log.46676269._088546.job.log.tgz.1
[2025-10-12 23:25:42] -rw------- 1 boincer umatlas      7859 Oct 12 23:25 heartbeat.json
[2025-10-12 23:25:42] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 23:25 boinc_mmap_file
[2025-10-12 23:25:42] -rw-r--r-- 1 boincer umatlas        28 Oct 12 23:25 wrapper_checkpoint.txt
[2025-10-12 23:25:42] -rw------- 1 boincer umatlas      4893 Oct 12 23:25 pilotlog.txt
[2025-10-12 23:25:42] -rw------- 1 boincer umatlas   1448662 Oct 12 23:25 log.46676269._088546.job.log.1
[2025-10-12 23:25:42] -rw------- 1 boincer umatlas       357 Oct 12 23:25 output.list
[2025-10-12 23:25:42] -rw-r--r-- 1 boincer umatlas       620 Oct 12 23:25 runtime_log
[2025-10-12 23:25:42] -rw------- 1 boincer umatlas   1873920 Oct 12 23:25 result.tar.gz
[2025-10-12 23:25:42] -rw-r--r-- 1 boincer umatlas      8699 Oct 12 23:25 runtime_log.err
[2025-10-12 23:25:42] -rw------- 1 boincer umatlas       661 Oct 12 23:25 5TtMDmsnHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhRlNDm0MoBGm.diag
[2025-10-12 23:25:42] -rw-r--r-- 1 boincer umatlas     20842 Oct 12 23:25 stderr.txt
[2025-10-12 23:25:42] HITS file was successfully produced:
[2025-10-12 23:25:42] -rw------- 1 boincer umatlas 191962605 Oct 12 23:24 shared/HITS.pool.root.1
[2025-10-12 23:25:42]  *** Contents of shared directory: ***
[2025-10-12 23:25:42] total 406408
[2025-10-12 23:25:42] -rw-r--r-- 2 boincer umatlas 221728279 Oct 12 20:33 ATLAS.root_0
[2025-10-12 23:25:42] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:33 start_atlas.sh
[2025-10-12 23:25:42] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 20:33 input.tar.gz
[2025-10-12 23:25:42] -rw------- 1 boincer umatlas 191962605 Oct 12 23:24 HITS.pool.root.1
[2025-10-12 23:25:42] -rw------- 1 boincer umatlas   1873920 Oct 12 23:25 result.tar.gz
23:25:44 (21543): run_atlas exited; CPU time 77692.183447
23:25:44 (21543): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN