Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:13:31 (12258): wrapper (7.7.26015): starting
20:13:31 (12258): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 20:13:31] Arguments: --nthreads 12
[2025-10-12 20:13:31] Threads: 12
[2025-10-12 20:13:31] Checking for CVMFS
[2025-10-12 20:13:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:13:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:13:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:13:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:13:31] 2.11.2.0 2998 39300 92932 151641 1 57 15413549 20275200 1 130560 0 24755501 99.991 1281513 44944 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 20:13:31] CVMFS is ok
[2025-10-12 20:13:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:13:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:13:31] Further information can be found at the LHC@home message board.
[2025-10-12 20:13:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:13:31] Checking for apptainer binary...
[2025-10-12 20:13:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:13:31] Running /usr/bin/apptainer --version
[2025-10-12 20:13:31] apptainer version 1.3.2-1.el7
[2025-10-12 20:13:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:13:33] c-205-12.aglt2.org
[2025-10-12 20:13:33] apptainer works
[2025-10-12 20:13:33] Set ATHENA_PROC_NUMBER=12
[2025-10-12 20:13:33] Set ATHENA_CORE_NUMBER=12
[2025-10-12 20:13:33] Starting ATLAS job with PandaID=6840536109
[2025-10-12 20:13:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:26:00]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:26:00]  storage_token=
[2025-10-12 21:26:00]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840536109/log.46676269._086164.job.log.tgz.1
[2025-10-12 21:26:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/6d/log.46676269._086164.job.log.tgz.1
[2025-10-12 21:26:00]  workdir=None
[2025-10-12 21:26:00] ]
[2025-10-12 21:26:00] 2025-10-13 01:25:18,677 | INFO     | transferring file log.46676269._086164.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840536109/log.46676269._086164.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 21:26:00] 2025-10-13 01:25:18,678 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840536109/log.46676269._086164.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._086164.job
[2025-10-12 21:26:00] 2025-10-13 01:25:18,704 | INFO     | adding to output.list: log.46676269._086164.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/6d/log.46676269._086164.job.log.tg
[2025-10-12 21:26:00] 2025-10-13 01:25:18,705 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 21:26:00] 2025-10-13 01:25:18,705 | INFO     | summary of transferred files:
[2025-10-12 21:26:00] 2025-10-13 01:25:18,705 | INFO     |  -- lfn=log.46676269._086164.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 21:26:00] 2025-10-13 01:25:18,705 | INFO     | stage-out finished correctly
[2025-10-12 21:26:00] 2025-10-13 01:25:19,188 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 21:26:00] 2025-10-13 01:25:20,087 | INFO     | time since job start (4292s) is within the limit (172800.0s)
[2025-10-12 21:26:00] 2025-10-13 01:25:21,226 | WARNING  | process 22335 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 21:26:00] 2025-10-13 01:25:21,226 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840536109/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:26:00] 2025-10-13 01:25:21,313 | INFO     | number of running child processes to parent process 22335: 1
[2025-10-12 21:26:00] 2025-10-13 01:25:21,313 | INFO     | maximum number of monitored processes: 6
[2025-10-12 21:26:00] 2025-10-13 01:25:22,019 | INFO     | job 6840536109 has state=finished
[2025-10-12 21:26:00] 2025-10-13 01:25:22,019 | INFO     | preparing for final server update for job 6840536109 in state='finished'
[2025-10-12 21:26:00] 2025-10-13 01:25:22,020 | INFO     | this job has now completed (state=finished)
[2025-10-12 21:26:00] 2025-10-13 01:25:22,020 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 21:26:00] 2025-10-13 01:25:22,020 | INFO     | log transfer has been attempted: DONE
[2025-10-12 21:26:00] 2025-10-13 01:25:22,020 | INFO     | job 6840536109 has finished - writing final server update
[2025-10-12 21:26:00] 2025-10-13 01:25:22,020 | INFO     | total number of processed events: 400 (read)
[2025-10-12 21:26:00] 2025-10-13 01:25:22,021 | INFO     | executing command: lscpu
[2025-10-12 21:26:00] 2025-10-13 01:25:22,050 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 21:26:00] 2025-10-13 01:25:22,090 | INFO     | time since job start (4294s) is within the limit (172800.0s)
[2025-10-12 21:26:00] 2025-10-13 01:25:23,816 | INFO     | monitor loop #322: job 0:6840536109 is in state 'finished'
[2025-10-12 21:26:00] 2025-10-13 01:25:23,816 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:26:00] 2025-10-13 01:25:24,095 | INFO     | time since job start (4296s) is within the limit (172800.0s)
[2025-10-12 21:26:00] 2025-10-13 01:25:26,100 | INFO     | time since job start (4298s) is within the limit (172800.0s)
[2025-10-12 21:26:00] 2025-10-13 01:25:26,319 | INFO     | monitor loop #323: job 0:6840536109 is in state 'finished'
[2025-10-12 21:26:00] 2025-10-13 01:25:26,319 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:26:00] 2025-10-13 01:25:26,909 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 21:26:00] 2025-10-13 01:25:26,912 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.6666666666667
[2025-10-12 21:26:00] 2025-10-13 01:25:26,914 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840536109/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:26:00] 2025-10-13 01:25:26,914 | INFO     | extracted standard info from prmon json
[2025-10-12 21:26:00] 2025-10-13 01:25:26,915 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 21:26:00] 2025-10-13 01:25:26,915 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:26:00] 2025-10-13 01:25:26,915 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:26:00] 2025-10-13 01:25:26,915 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:26:00] 2025-10-13 01:25:26,917 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:26:00] 2025-10-13 01:25:26,917 | INFO     | sum of square deviations: 77515872.0
[2025-10-12 21:26:00] 2025-10-13 01:25:26,917 | INFO     | sum of deviations: 1414499476.0
[2025-10-12 21:26:00] 2025-10-13 01:25:26,917 | INFO     | mean x: 1760316653.0
[2025-10-12 21:26:00] 2025-10-13 01:25:26,917 | INFO     | mean y: 2730744.492063492
[2025-10-12 21:26:00] 2025-10-13 01:25:26,917 | INFO     | -- intersect: -32119296899.892483
[2025-10-12 21:26:00] 2025-10-13 01:25:26,918 | INFO     | intersect: -32119296899.892483
[2025-10-12 21:26:00] 2025-10-13 01:25:26,918 | INFO     | chi2: 0.013879656012522605
[2025-10-12 21:26:00] 2025-10-13 01:25:26,918 | INFO     | -- intersect: -32119296899.892483
[2025-10-12 21:26:00] 2025-10-13 01:25:26,918 | INFO     | current memory leak: 18.25 B/s (using 63 data points, chi2=0.01)
[2025-10-12 21:26:00] 2025-10-13 01:25:26,918 | INFO     | could have reported an average CPU frequency of 2019 MHz (6 samples)
[2025-10-12 21:26:00] 2025-10-13 01:25:26,918 | INFO     | ..............................
[2025-10-12 21:26:00] 2025-10-13 01:25:26,918 | INFO     | . Timing measurements:
[2025-10-12 21:26:00] 2025-10-13 01:25:26,919 | INFO     | . get job = 0 s
[2025-10-12 21:26:00] 2025-10-13 01:25:26,919 | INFO     | . initial setup = 2 s
[2025-10-12 21:26:00] 2025-10-13 01:25:26,919 | INFO     | . payload setup = 7 s
[2025-10-12 21:26:00] 2025-10-13 01:25:26,919 | INFO     | . stage-in = 0 s
[2025-10-12 21:26:00] 2025-10-13 01:25:26,919 | INFO     | . payload execution = 4262 s
[2025-10-12 21:26:00] 2025-10-13 01:25:26,919 | INFO     | . stage-out = 0 s
[2025-10-12 21:26:00] 2025-10-13 01:25:26,919 | INFO     | . log creation = 0 s
[2025-10-12 21:26:00] 2025-10-13 01:25:26,919 | INFO     | ..............................
[2025-10-12 21:26:00] 2025-10-13 01:25:27,001 | INFO     | 
[2025-10-12 21:26:00] 2025-10-13 01:25:27,001 | INFO     | job summary report
[2025-10-12 21:26:00] 2025-10-13 01:25:27,002 | INFO     | --------------------------------------------------
[2025-10-12 21:26:00] 2025-10-13 01:25:27,002 | INFO     | PanDA job id: 6840536109
[2025-10-12 21:26:00] 2025-10-13 01:25:27,002 | INFO     | task id: 46676269
[2025-10-12 21:26:00] 2025-10-13 01:25:27,002 | INFO     | errors: (none)
[2025-10-12 21:26:00] 2025-10-13 01:25:27,002 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:26:00] 2025-10-13 01:25:27,002 | INFO     | pilot state: finished 
[2025-10-12 21:26:00] 2025-10-13 01:25:27,002 | INFO     | transexitcode: 0
[2025-10-12 21:26:00] 2025-10-13 01:25:27,003 | INFO     | exeerrorcode: 0
[2025-10-12 21:26:00] 2025-10-13 01:25:27,003 | INFO     | exeerrordiag: 
[2025-10-12 21:26:00] 2025-10-13 01:25:27,003 | INFO     | exitcode: 0
[2025-10-12 21:26:00] 2025-10-13 01:25:27,003 | INFO     | exitmsg: OK
[2025-10-12 21:26:00] 2025-10-13 01:25:27,003 | INFO     | cpuconsumptiontime: 44195 s
[2025-10-12 21:26:00] 2025-10-13 01:25:27,003 | INFO     | nevents: 400
[2025-10-12 21:26:00] 2025-10-13 01:25:27,004 | INFO     | neventsw: 0
[2025-10-12 21:26:00] 2025-10-13 01:25:27,004 | INFO     | pid: 22335
[2025-10-12 21:26:00] 2025-10-13 01:25:27,004 | INFO     | pgrp: 22335
[2025-10-12 21:26:00] 2025-10-13 01:25:27,004 | INFO     | corecount: 12
[2025-10-12 21:26:00] 2025-10-13 01:25:27,004 | INFO     | event service: False
[2025-10-12 21:26:00] 2025-10-13 01:25:27,004 | INFO     | sizes: {0: 2348806, 5: 2349068, 11: 2349124, 4273: 2375145, 4274: 2384199, 4282: 2384337}
[2025-10-12 21:26:00] 2025-10-13 01:25:27,005 | INFO     | --------------------------------------------------
[2025-10-12 21:26:00] 2025-10-13 01:25:27,005 | INFO     | 
[2025-10-12 21:26:00] 2025-10-13 01:25:27,005 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 21:26:00] 2025-10-13 01:25:27,033 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:26:00] 2025-10-13 01:25:27,033 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:26:00] 2025-10-13 01:25:27,033 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:26:00] 2025-10-13 01:25:27,033 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:26:00] 2025-10-13 01:25:27,034 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:26:00] 2025-10-13 01:25:27,034 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:26:00] 2025-10-13 01:25:27,034 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:26:00] 2025-10-13 01:25:27,034 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:26:00] 2025-10-13 01:25:27,034 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:26:00] 2025-10-13 01:25:27,034 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:26:00] 2025-10-13 01:25:27,035 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:26:00] 2025-10-13 01:25:27,035 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:26:00] 2025-10-13 01:25:27,035 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:26:00] 2025-10-13 01:25:27,035 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:26:00] 2025-10-13 01:25:27,035 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:26:00] 2025-10-13 01:25:27,035 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:26:00] 2025-10-13 01:25:27,035 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:26:00] 2025-10-13 01:25:27,036 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:26:00] 2025-10-13 01:25:27,036 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:26:00] 2025-10-13 01:25:27,036 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:26:00] 2025-10-13 01:25:27,036 | INFO     | job 6840536109 has completed (purged errors)
[2025-10-12 21:26:00] 2025-10-13 01:25:27,036 | INFO     | overall cleanup function is called
[2025-10-12 21:26:00] 2025-10-13 01:25:28,042 | INFO     | --- collectZombieJob: --- 10, [22335]
[2025-10-12 21:26:00] 2025-10-13 01:25:28,043 | INFO     | zombie collector waiting for pid 22335
[2025-10-12 21:26:00] 2025-10-13 01:25:28,043 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:26:00] 2025-10-13 01:25:28,043 | INFO     | collected zombie processes
[2025-10-12 21:26:00] 2025-10-13 01:25:28,043 | INFO     | will attempt to kill all subprocesses of pid=22335
[2025-10-12 21:26:00] 2025-10-13 01:25:28,133 | INFO     | process IDs to be killed: [22335] (in reverse order)
[2025-10-12 21:26:00] 2025-10-13 01:25:28,186 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:26:00] 2025-10-13 01:25:28,187 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:26:00] 2025-10-13 01:25:28,191 | INFO     | did not find any defunct processes belonging to 22335
[2025-10-12 21:26:00] 2025-10-13 01:25:28,193 | INFO     | did not find any defunct processes belonging to 22335
[2025-10-12 21:26:00] 2025-10-13 01:25:28,193 | INFO     | ready for new job
[2025-10-12 21:26:00] 2025-10-13 01:25:28,193 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:26:00] 2025-10-13 01:25:28,194 | INFO     | ***************************************
[2025-10-12 21:26:00] 2025-10-13 01:25:28,194 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:26:00] 2025-10-13 01:25:28,194 | INFO     | ***************************************
[2025-10-12 21:26:00] 2025-10-13 01:25:28,194 | INFO     | 
[2025-10-12 21:26:00] 2025-10-13 01:25:28,195 | INFO     | architecture information:
[2025-10-12 21:26:00] 2025-10-13 01:25:28,195 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:26:00] 2025-10-13 01:25:28,213 | INFO     | cat /etc/os-release:
[2025-10-12 21:26:00] NAME="CentOS Linux"
[2025-10-12 21:26:00] VERSION="7 (Core)"
[2025-10-12 21:26:00] ID="centos"
[2025-10-12 21:26:00] ID_LIKE="rhel fedora"
[2025-10-12 21:26:00] VERSION_ID="7"
[2025-10-12 21:26:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:26:00] ANSI_COLOR="0;31"
[2025-10-12 21:26:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:26:00] HOME_URL="https://www.centos.org/"
[2025-10-12 21:26:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:26:00] 
[2025-10-12 21:26:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:26:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:26:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:26:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:26:00] 
[2025-10-12 21:26:00] 2025-10-13 01:25:28,213 | INFO     | ***************************************
[2025-10-12 21:26:00] 2025-10-13 01:25:28,716 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 21:26:00] 2025-10-13 01:25:28,735 | INFO     | sufficient remaining disk space (29369565184 B)
[2025-10-12 21:26:00] 2025-10-13 01:25:28,735 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:26:00] 2025-10-13 01:25:28,735 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:26:00] 2025-10-13 01:25:28,735 | INFO     | update_server=False
[2025-10-12 21:26:00] 2025-10-13 01:25:28,736 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:26:00] 2025-10-13 01:25:28,736 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:26:00] 2025-10-13 01:25:28,822 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 21:26:00] 2025-10-13 01:25:28,822 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 21:26:00] 2025-10-13 01:25:28,822 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:26:00] 2025-10-13 01:25:28,823 | INFO     | will abort loop
[2025-10-12 21:26:00] 2025-10-13 01:25:28,989 | INFO     | all job control threads have been joined
[2025-10-12 21:26:00] 2025-10-13 01:25:29,304 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:26:00] 2025-10-13 01:25:29,460 | INFO     | all payload control threads have been joined
[2025-10-12 21:26:00] 2025-10-13 01:25:29,624 | INFO     | all data control threads have been joined
[2025-10-12 21:26:00] 2025-10-13 01:25:29,741 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:26:00] 2025-10-13 01:25:29,742 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:26:00] 2025-10-13 01:25:29,775 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:26:00] 2025-10-13 01:25:29,827 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:26:00] 2025-10-13 01:25:29,995 | INFO     | [job] control thread has finished
[2025-10-12 21:26:00] 2025-10-13 01:25:30,139 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:26:00] 2025-10-13 01:25:30,324 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:26:00] 2025-10-13 01:25:30,466 | INFO     | [payload] control thread has finished
[2025-10-12 21:26:00] 2025-10-13 01:25:30,629 | INFO     | [data] control thread has finished
[2025-10-12 21:26:00] 2025-10-13 01:25:30,836 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:26:00] 2025-10-13 01:25:30,845 | INFO     | [job] validate thread has finished
[2025-10-12 21:26:00] 2025-10-13 01:25:31,051 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:26:00] 2025-10-13 01:25:31,103 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:26:00] 2025-10-13 01:25:31,238 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:26:00] 2025-10-13 01:25:31,310 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:26:00] 2025-10-13 01:25:33,781 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:26:00] 2025-10-13 01:25:39,514 | INFO     | job.realtimelogging is not enabled
[2025-10-12 21:26:00] 2025-10-13 01:25:40,519 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:26:00] 2025-10-13 01:25:54,660 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:26:00] 2025-10-13 01:25:54,865 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140290776213312)>', '<ExcThread(monitor, started 140290190989056)>']
[2025-10-12 21:26:00] 2025-10-13 01:25:59,305 | INFO     | PID=15929 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 21:26:00] 2025-10-13 01:25:59,306 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:26:00] 2025-10-13 01:25:59,306 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:26:00] 2025-10-13 01:25:59,306 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:26:00] 2025-10-13 01:25:59,306 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:26:00] 2025-10-13 01:25:59,306 | INFO     | [monitor] control thread has ended
[2025-10-12 21:26:00] 2025-10-13 01:25:59,891 | INFO     | all workflow threads have been joined
[2025-10-12 21:26:00] 2025-10-13 01:25:59,891 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:26:00] 2025-10-13 01:25:59,917 | INFO     | traces error code: 0
[2025-10-12 21:26:00] 2025-10-13 01:25:59,917 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:26:00] 2025-10-13 01:26:00,005 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:26:00] 2025-10-13 01:26:00,009 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:26:00] 2025-10-13 01:26:00,013 [wrapper] pilotpid: 15929
[2025-10-12 21:26:00] 2025-10-13 01:26:00,017 [wrapper] Pilot exit status: 0
[2025-10-12 21:26:00] 2025-10-13 01:26:00,033 [wrapper] pandaids: 6840536109
[2025-10-12 21:26:00] 2025-10-13 01:26:00,078 [wrapper] cleanup supervisor_pilot 29471 15930
[2025-10-12 21:26:00] 2025-10-13 01:26:00,082 [wrapper] Test setup, not cleaning
[2025-10-12 21:26:00] 2025-10-13 01:26:00,086 [wrapper] apfmon messages muted
[2025-10-12 21:26:00] 2025-10-13 01:26:00,090 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:26:00] 2025-10-13 01:26:00,095 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:26:00]  *** Error codes and diagnostics ***
[2025-10-12 21:26:00]     "exeErrorCode": 0,
[2025-10-12 21:26:00]     "exeErrorDiag": "",
[2025-10-12 21:26:00]     "pilotErrorCode": 0,
[2025-10-12 21:26:00]     "pilotErrorDiag": "",
[2025-10-12 21:26:00]  *** Listing of results directory ***
[2025-10-12 21:26:00] total 408716
[2025-10-12 21:26:00] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 14:20 pilot3.tar.gz
[2025-10-12 21:26:00] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 14:25 queuedata.json
[2025-10-12 21:26:00] -rwx------ 1 boincer umatlas     36292 Oct 12 14:27 runpilot2-wrapper.sh
[2025-10-12 21:26:00] -rw-r--r-- 1 boincer umatlas       100 Oct 12 20:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:26:00] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 20:13 run_atlas
[2025-10-12 21:26:00] -rw-r--r-- 1 boincer umatlas       105 Oct 12 20:13 job.xml
[2025-10-12 21:26:00] -rw-r--r-- 2 boincer umatlas 219202047 Oct 12 20:13 EVNT.46676267._004406.pool.root.1
[2025-10-12 21:26:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:13 start_atlas.sh
[2025-10-12 21:26:00] drwxrwx--x 2 boincer umatlas      4096 Oct 12 20:13 shared
[2025-10-12 21:26:00] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 20:13 input.tar.gz
[2025-10-12 21:26:00] -rw-r--r-- 1 boincer umatlas         0 Oct 12 20:13 boinc_lockfile
[2025-10-12 21:26:00] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 20:13 pandaJob.out
[2025-10-12 21:26:00] -rw------- 1 boincer umatlas    975603 Oct 12 20:13 agis_schedconf.cvmfs.json
[2025-10-12 21:26:00] -rw------- 1 boincer umatlas   1560580 Oct 12 20:13 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:26:00] drwx------ 5 boincer umatlas      4096 Oct 12 20:13 pilot3
[2025-10-12 21:26:00] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 21:20 init_data.xml
[2025-10-12 21:26:00] -rw------- 1 boincer umatlas 193391900 Oct 12 21:24 HITS.46676269._086164.pool.root.1
[2025-10-12 21:26:00] -rw-r--r-- 1 boincer umatlas       529 Oct 12 21:25 boinc_task_state.xml
[2025-10-12 21:26:00] -rw------- 1 boincer umatlas      1049 Oct 12 21:25 memory_monitor_summary.json
[2025-10-12 21:26:00] -rw------- 1 boincer umatlas    386075 Oct 12 21:25 log.46676269._086164.job.log.tgz.1
[2025-10-12 21:26:00] -rw------- 1 boincer umatlas      7849 Oct 12 21:25 heartbeat.json
[2025-10-12 21:26:00] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 21:25 boinc_mmap_file
[2025-10-12 21:26:00] -rw-r--r-- 1 boincer umatlas        27 Oct 12 21:25 wrapper_checkpoint.txt
[2025-10-12 21:26:00] -rw------- 1 boincer umatlas        95 Oct 12 21:25 pilot_heartbeat.json
[2025-10-12 21:26:00] -rw------- 1 boincer umatlas      5004 Oct 12 21:25 pilotlog.txt
[2025-10-12 21:26:00] -rw------- 1 boincer umatlas    628205 Oct 12 21:26 log.46676269._086164.job.log.1
[2025-10-12 21:26:00] -rw------- 1 boincer umatlas       357 Oct 12 21:26 output.list
[2025-10-12 21:26:00] -rw-r--r-- 1 boincer umatlas       620 Oct 12 21:26 runtime_log
[2025-10-12 21:26:00] -rw------- 1 boincer umatlas   1034240 Oct 12 21:26 result.tar.gz
[2025-10-12 21:26:00] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 21:26 runtime_log.err
[2025-10-12 21:26:00] -rw------- 1 boincer umatlas       659 Oct 12 21:26 5ZYMDmVyFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmz3kNDm9HjcNo.diag
[2025-10-12 21:26:00] -rw-r--r-- 1 boincer umatlas     22138 Oct 12 21:26 stderr.txt
[2025-10-12 21:26:00] HITS file was successfully produced:
[2025-10-12 21:26:00] -rw------- 1 boincer umatlas 193391900 Oct 12 21:24 shared/HITS.pool.root.1
[2025-10-12 21:26:00]  *** Contents of shared directory: ***
[2025-10-12 21:26:00] total 404516
[2025-10-12 21:26:00] -rw-r--r-- 2 boincer umatlas 219202047 Oct 12 20:13 ATLAS.root_0
[2025-10-12 21:26:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:13 start_atlas.sh
[2025-10-12 21:26:00] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 20:13 input.tar.gz
[2025-10-12 21:26:00] -rw------- 1 boincer umatlas 193391900 Oct 12 21:24 HITS.pool.root.1
[2025-10-12 21:26:00] -rw------- 1 boincer umatlas   1034240 Oct 12 21:26 result.tar.gz
21:26:01 (12258): run_atlas exited; CPU time 44196.430321
21:26:01 (12258): called boinc_finish(0)

</stderr_txt>
]]>

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