Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:16:40 (2127486): wrapper (7.7.26015): starting
11:16:40 (2127486): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 11:16:40] Arguments: --nthreads 4
[2025-10-13 11:16:40] Threads: 4
[2025-10-13 11:16:40] Checking for CVMFS
[2025-10-13 11:16:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 11:16:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 11:16:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 11:16:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 11:16:40] 2.9.2.0 168809 5510 98156 151656 0 56 29791209 36864000 0 130560 0 5095036 99.992 191311 863 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 11:16:40] CVMFS is ok
[2025-10-13 11:16:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 11:16:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 11:16:40] Further information can be found at the LHC@home message board.
[2025-10-13 11:16:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 11:16:40] Checking for apptainer binary...
[2025-10-13 11:16:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 11:16:40] Running /usr/bin/apptainer --version
[2025-10-13 11:16:40] apptainer version 1.4.1-1.1
[2025-10-13 11:16:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 11:16:40] thA334
[2025-10-13 11:16:40] apptainer works
[2025-10-13 11:16:40] Set ATHENA_PROC_NUMBER=4
[2025-10-13 11:16:40] Set ATHENA_CORE_NUMBER=4
[2025-10-13 11:16:40] Starting ATLAS job with PandaID=6840714444
[2025-10-13 11:16:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:27:16]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:27:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:27:16] ANSI_COLOR="0;31"
[2025-10-13 12:27:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:27:16] HOME_URL="https://www.centos.org/"
[2025-10-13 12:27:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:27:16] 
[2025-10-13 12:27:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:27:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:27:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:27:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:27:16] 
[2025-10-13 12:27:16] 2025-10-13 10:26:45,719 | INFO     | ***************************************
[2025-10-13 12:27:16] 2025-10-13 10:26:46,222 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 12:27:16] 2025-10-13 10:26:46,239 | INFO     | sufficient remaining disk space (229708398592 B)
[2025-10-13 12:27:16] 2025-10-13 10:26:46,239 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:27:16] 2025-10-13 10:26:46,239 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:27:16] 2025-10-13 10:26:46,239 | INFO     | update_server=False
[2025-10-13 12:27:16] 2025-10-13 10:26:46,239 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:27:16] 2025-10-13 10:26:46,239 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:27:16] 2025-10-13 10:26:46,240 | INFO     | aborting loop
[2025-10-13 12:27:16] 2025-10-13 10:26:46,240 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:27:16] 2025-10-13 10:26:46,457 | INFO     | all data control threads have been joined
[2025-10-13 12:27:16] 2025-10-13 10:26:46,701 | INFO     | all payload control threads have been joined
[2025-10-13 12:27:16] 2025-10-13 10:26:47,245 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:27:16] 2025-10-13 10:26:47,246 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:27:16] 2025-10-13 10:26:47,246 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:27:16] 2025-10-13 10:26:47,381 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:27:16] 2025-10-13 10:26:47,463 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:27:16] 2025-10-13 10:26:47,463 | INFO     | [data] control thread has finished
[2025-10-13 12:27:16] 2025-10-13 10:26:47,619 | INFO     | all job control threads have been joined
[2025-10-13 12:27:16] 2025-10-13 10:26:47,660 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:27:16] 2025-10-13 10:26:47,707 | INFO     | [payload] control thread has finished
[2025-10-13 12:27:16] 2025-10-13 10:26:47,877 | INFO     | [job] validate thread has finished
[2025-10-13 12:27:16] 2025-10-13 10:26:48,008 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:27:16] 2025-10-13 10:26:48,121 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:27:16] 2025-10-13 10:26:48,160 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:27:16] 2025-10-13 10:26:48,324 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:27:16] 2025-10-13 10:26:48,622 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:27:16] 2025-10-13 10:26:48,624 | INFO     | [job] control thread has finished
[2025-10-13 12:27:16] 2025-10-13 10:26:48,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:27:16] 2025-10-13 10:26:49,387 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:27:16] 2025-10-13 10:26:52,721 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:27:16] 2025-10-13 10:26:53,635 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:27:16] 2025-10-13 10:26:54,020 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140154443446080)>', '<ExcThread(monitor, started 140153372800768)>']
[2025-10-13 12:27:16] 2025-10-13 10:26:59,044 | INFO     | all workflow threads have been joined
[2025-10-13 12:27:16] 2025-10-13 10:26:59,045 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:27:16] 2025-10-13 10:26:59,045 | INFO     | traces error code: 0
[2025-10-13 12:27:16] 2025-10-13 10:26:59,045 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:27:16] 2025-10-13 10:27:15,937 | INFO     | PID=2131286 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 12:27:16] 2025-10-13 10:27:15,937 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:27:16] 2025-10-13 10:27:15,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:27:16] 2025-10-13 10:27:15,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:27:16] 2025-10-13 10:27:15,937 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:27:16] 2025-10-13 10:27:15,937 | INFO     | [monitor] control thread has ended
[2025-10-13 12:27:16] 2025-10-13 10:27:16,001 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:27:16] 2025-10-13 10:27:16,005 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:27:16] 2025-10-13 10:27:16,009 [wrapper] pilotpid: 2131286
[2025-10-13 12:27:16] 2025-10-13 10:27:16,012 [wrapper] Pilot exit status: 0
[2025-10-13 12:27:16] 2025-10-13 10:27:16,023 [wrapper] pandaids: 6840714444
[2025-10-13 12:27:16] 2025-10-13 10:27:16,043 [wrapper] cleanup supervisor_pilot 2147546 2131287
[2025-10-13 12:27:16] 2025-10-13 10:27:16,046 [wrapper] Test setup, not cleaning
[2025-10-13 12:27:16] 2025-10-13 10:27:16,050 [wrapper] apfmon messages muted
[2025-10-13 12:27:16] 2025-10-13 10:27:16,053 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:27:16] 2025-10-13 10:27:16,057 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:27:16]  *** Error codes and diagnostics ***
[2025-10-13 12:27:16]     "exeErrorCode": 0,
[2025-10-13 12:27:16]     "exeErrorDiag": "",
[2025-10-13 12:27:16]     "pilotErrorCode": 0,
[2025-10-13 12:27:16]     "pilotErrorDiag": "",
[2025-10-13 12:27:16]  *** Listing of results directory ***
[2025-10-13 12:27:16] total 408488
[2025-10-13 12:27:16] -rw-r--r-- 1 boinc boinc    557409 Oct 12 21:28 pilot3.tar.gz
[2025-10-13 12:27:16] -rw-r--r-- 1 boinc boinc      5112 Oct 12 21:43 queuedata.json
[2025-10-13 12:27:16] -rwx------ 1 boinc boinc     36292 Oct 12 21:43 runpilot2-wrapper.sh
[2025-10-13 12:27:16] -rw-r--r-- 1 boinc boinc       100 Oct 13 11:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:27:16] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 11:16 run_atlas
[2025-10-13 12:27:16] -rw-r--r-- 1 boinc boinc       105 Oct 13 11:16 job.xml
[2025-10-13 12:27:16] -rw-r--r-- 2 boinc boinc 220212047 Oct 13 11:16 EVNT.46676267._004468.pool.root.1
[2025-10-13 12:27:16] -rw-r--r-- 2 boinc boinc    569679 Oct 13 11:16 input.tar.gz
[2025-10-13 12:27:16] -rw-r--r-- 2 boinc boinc     15120 Oct 13 11:16 start_atlas.sh
[2025-10-13 12:27:16] drwxrwx--x 2 boinc boinc      4096 Oct 13 11:16 shared
[2025-10-13 12:27:16] -rw-r--r-- 1 boinc boinc         0 Oct 13 11:16 boinc_setup_complete
[2025-10-13 12:27:16] -rw-r--r-- 1 boinc boinc      6368 Oct 13 11:16 init_data.xml
[2025-10-13 12:27:16] -rw-r--r-- 1 boinc boinc         0 Oct 13 11:16 boinc_lockfile
[2025-10-13 12:27:16] -rw-r--r-- 1 boinc boinc      2550 Oct 13 11:16 pandaJob.out
[2025-10-13 12:27:16] -rw------- 1 boinc boinc    972849 Oct 13 11:16 agis_schedconf.cvmfs.json
[2025-10-13 12:27:16] -rw------- 1 boinc boinc   1560580 Oct 13 11:16 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:27:16] drwx------ 5 boinc boinc      4096 Oct 13 11:16 pilot3
[2025-10-13 12:27:16] -rw------- 1 boinc boinc 192432531 Oct 13 12:26 HITS.46676269._087840.pool.root.1
[2025-10-13 12:27:16] -rw-r--r-- 1 boinc boinc       529 Oct 13 12:26 boinc_task_state.xml
[2025-10-13 12:27:16] -rw------- 1 boinc boinc      1019 Oct 13 12:26 memory_monitor_summary.json
[2025-10-13 12:27:16] -rw------- 1 boinc boinc    254176 Oct 13 12:26 log.46676269._087840.job.log.tgz.1
[2025-10-13 12:27:16] -rw------- 1 boinc boinc      7763 Oct 13 12:26 heartbeat.json
[2025-10-13 12:27:16] -rw-r--r-- 1 boinc boinc      8192 Oct 13 12:27 boinc_mmap_file
[2025-10-13 12:27:16] -rw-r--r-- 1 boinc boinc        27 Oct 13 12:27 wrapper_checkpoint.txt
[2025-10-13 12:27:16] -rw------- 1 boinc boinc       747 Oct 13 12:27 pilotlog.txt
[2025-10-13 12:27:16] -rw------- 1 boinc boinc        95 Oct 13 12:27 pilot_heartbeat.json
[2025-10-13 12:27:16] -rw------- 1 boinc boinc    624710 Oct 13 12:27 log.46676269._087840.job.log.1
[2025-10-13 12:27:16] -rw------- 1 boinc boinc       357 Oct 13 12:27 output.list
[2025-10-13 12:27:16] -rw-r--r-- 1 boinc boinc       620 Oct 13 12:27 runtime_log
[2025-10-13 12:27:16] -rw------- 1 boinc boinc    901120 Oct 13 12:27 result.tar.gz
[2025-10-13 12:27:16] -rw-r--r-- 1 boinc boinc      8777 Oct 13 12:27 runtime_log.err
[2025-10-13 12:27:16] -rw------- 1 boinc boinc       658 Oct 13 12:27 X9QNDmCAHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWJlNDm1vZERn.diag
[2025-10-13 12:27:16] -rw-r--r-- 1 boinc boinc      8507 Oct 13 12:27 stderr.txt
[2025-10-13 12:27:16] HITS file was successfully produced:
[2025-10-13 12:27:16] -rw------- 1 boinc boinc 192432531 Oct 13 12:26 shared/HITS.pool.root.1
[2025-10-13 12:27:16]  *** Contents of shared directory: ***
[2025-10-13 12:27:16] total 404440
[2025-10-13 12:27:16] -rw-r--r-- 2 boinc boinc 220212047 Oct 13 11:16 ATLAS.root_0
[2025-10-13 12:27:16] -rw-r--r-- 2 boinc boinc    569679 Oct 13 11:16 input.tar.gz
[2025-10-13 12:27:16] -rw-r--r-- 2 boinc boinc     15120 Oct 13 11:16 start_atlas.sh
[2025-10-13 12:27:16] -rw------- 1 boinc boinc 192432531 Oct 13 12:26 HITS.pool.root.1
[2025-10-13 12:27:16] -rw------- 1 boinc boinc    901120 Oct 13 12:27 result.tar.gz
12:27:17 (2127486): run_atlas exited; CPU time 15768.205380
12:27:17 (2127486): called boinc_finish(0)

</stderr_txt>
]]>

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