Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:58:40 (3720092): wrapper (7.7.26015): starting
21:58:40 (3720092): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 21:58:40] Arguments: --nthreads 9
[2025-10-12 21:58:40] Threads: 9
[2025-10-12 21:58:40] Checking for CVMFS
[2025-10-12 21:58:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:58:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:58:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:58:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:58:42] 2.13.2.0 4486 36418 401496 151643 2 404 25672759 39288825 10469 16776704 0 60145045 99.525 72936213 31506 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 21:58:42] CVMFS is ok
[2025-10-12 21:58:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:58:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:58:42] Further information can be found at the LHC@home message board.
[2025-10-12 21:58:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:58:42] Checking for apptainer binary...
[2025-10-12 21:58:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:58:42] Running /usr/bin/apptainer --version
[2025-10-12 21:58:43] apptainer version 1.4.3-1.el9
[2025-10-12 21:58:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:58:43] c-211-25.aglt2.org
[2025-10-12 21:58:43] apptainer works
[2025-10-12 21:58:43] Set ATHENA_PROC_NUMBER=9
[2025-10-12 21:58:43] Set ATHENA_CORE_NUMBER=9
[2025-10-12 21:58:44] Starting ATLAS job with PandaID=6840851857
[2025-10-12 21:58:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:22:07]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:22:07] 2025-10-13 14:21:23,724 | INFO     | sum of deviations: 273731762046.7351
[2025-10-13 10:22:07] 2025-10-13 14:21:23,724 | INFO     | mean x: 1760343071.5289257
[2025-10-13 10:22:07] 2025-10-13 14:21:23,724 | INFO     | mean y: 2540868.750688705
[2025-10-13 10:22:07] 2025-10-13 14:21:23,724 | INFO     | -- intersect: -4058373843.374846
[2025-10-13 10:22:07] 2025-10-13 14:21:23,765 | INFO     | intersect: -4058373843.374846
[2025-10-13 10:22:07] 2025-10-13 14:21:23,766 | INFO     | chi2: 4.018942530575825
[2025-10-13 10:22:07] 2025-10-13 14:21:23,767 | INFO     | sum of square deviations: 116223777129.32886
[2025-10-13 10:22:07] 2025-10-13 14:21:24,339 | INFO     | time since job start (44475s) is within the limit (172800.0s)
[2025-10-13 10:22:07] 2025-10-13 14:21:24,341 | INFO     | sum of deviations: 318081218915.14166
[2025-10-13 10:22:07] 2025-10-13 14:21:24,341 | INFO     | mean x: 1760342919.0305133
[2025-10-13 10:22:07] 2025-10-13 14:21:24,341 | INFO     | mean y: 2543630.26629681
[2025-10-13 10:22:07] 2025-10-13 14:21:24,341 | INFO     | -- intersect: -4815162653.455628
[2025-10-13 10:22:07] 2025-10-13 14:21:24,342 | INFO     | intersect: -4815162653.455628
[2025-10-13 10:22:07] 2025-10-13 14:21:24,521 | INFO     | chi2: 3.328469971777796
[2025-10-13 10:22:07] 2025-10-13 14:21:24,521 | INFO     | current chi2=3.328469971777796 (change=17.180453652794572 %)
[2025-10-13 10:22:07] 2025-10-13 14:21:24,522 | INFO     | right removable region: 720
[2025-10-13 10:22:07] 2025-10-13 14:21:24,523 | INFO     | sum of square deviations: 116223498235.06258
[2025-10-13 10:22:07] 2025-10-13 14:21:24,941 | INFO     | monitor loop #2230: job 0:6840851857 is in state 'finished'
[2025-10-13 10:22:07] 2025-10-13 14:21:24,941 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:22:07] 2025-10-13 14:21:25,137 | INFO     | sum of deviations: 70899054152.9972
[2025-10-13 10:22:07] 2025-10-13 14:21:25,137 | INFO     | mean x: 1760343224.036061
[2025-10-13 10:22:07] 2025-10-13 14:21:25,137 | INFO     | mean y: 2553563.153952843
[2025-10-13 10:22:07] 2025-10-13 14:21:25,137 | INFO     | -- intersect: -1071297004.6234193
[2025-10-13 10:22:07] 2025-10-13 14:21:25,138 | INFO     | intersect: -1071297004.6234193
[2025-10-13 10:22:07] 2025-10-13 14:21:25,139 | INFO     | chi2: 1.2588458990401592
[2025-10-13 10:22:07] 2025-10-13 14:21:25,139 | INFO     | current chi2=1.2588458990401592 (change=68.67718586511377 %)
[2025-10-13 10:22:07] 2025-10-13 14:21:25,140 | INFO     | sum of square deviations: 113822134715.7432
[2025-10-13 10:22:07] 2025-10-13 14:21:25,345 | INFO     | sum of deviations: -6914086253.648033
[2025-10-13 10:22:07] 2025-10-13 14:21:25,345 | INFO     | mean x: 1760343376.5418994
[2025-10-13 10:22:07] 2025-10-13 14:21:25,345 | INFO     | mean y: 2558501.3882681564
[2025-10-13 10:22:07] 2025-10-13 14:21:25,345 | INFO     | -- intersect: 109489951.68872777
[2025-10-13 10:22:07] 2025-10-13 14:21:25,346 | INFO     | intersect: 109489951.68872777
[2025-10-13 10:22:07] 2025-10-13 14:21:25,347 | INFO     | chi2: 0.86189774777866
[2025-10-13 10:22:07] 2025-10-13 14:21:25,347 | INFO     | current chi2=0.86189774777866 (change=31.532704008025362 %)
[2025-10-13 10:22:07] 2025-10-13 14:21:25,404 | INFO     | sum of square deviations: 111454073780.37415
[2025-10-13 10:22:07] 2025-10-13 14:21:25,681 | INFO     | sum of deviations: -44231929735.64837
[2025-10-13 10:22:07] 2025-10-13 14:21:25,681 | INFO     | mean x: 1760343529.0478199
[2025-10-13 10:22:07] 2025-10-13 14:21:25,681 | INFO     | mean y: 2560901.8720112517
[2025-10-13 10:22:07] 2025-10-13 14:21:25,681 | INFO     | -- intersect: 701175036.343939
[2025-10-13 10:22:07] 2025-10-13 14:21:25,681 | INFO     | intersect: 701175036.343939
[2025-10-13 10:22:07] 2025-10-13 14:21:26,189 | INFO     | chi2: 0.7631653518483679
[2025-10-13 10:22:07] 2025-10-13 14:21:26,189 | INFO     | current chi2=0.7631653518483679 (change=11.455233081273484 %)
[2025-10-13 10:22:07] 2025-10-13 14:21:26,189 | INFO     | left removable region: 30
[2025-10-13 10:22:07] 2025-10-13 14:21:26,190 | INFO     | sum of square deviations: 101866874590.87674
[2025-10-13 10:22:07] 2025-10-13 14:21:27,034 | INFO     | sum of deviations: -4577054982.594181
[2025-10-13 10:22:07] 2025-10-13 14:21:27,034 | INFO     | mean x: 1760343803.5724638
[2025-10-13 10:22:07] 2025-10-13 14:21:27,034 | INFO     | mean y: 2564243.031884058
[2025-10-13 10:22:07] 2025-10-13 14:21:27,035 | INFO     | -- intersect: 81659536.86101018
[2025-10-13 10:22:07] 2025-10-13 14:21:27,035 | INFO     | intersect: 81659536.86101018
[2025-10-13 10:22:07] 2025-10-13 14:21:27,036 | INFO     | chi2: 0.034528051549616516
[2025-10-13 10:22:07] 2025-10-13 14:21:27,036 | INFO     | -- intersect: 81659536.86101018
[2025-10-13 10:22:07] 2025-10-13 14:21:27,060 | INFO     | current memory leak: -0.04 B/s (using 690 data points, chi2=0.03)
[2025-10-13 10:22:07] 2025-10-13 14:21:27,061 | INFO     | could have reported an average CPU frequency of 2899 MHz (27 samples)
[2025-10-13 10:22:07] 2025-10-13 14:21:27,062 | INFO     | ..............................
[2025-10-13 10:22:07] 2025-10-13 14:21:27,062 | INFO     | . Timing measurements:
[2025-10-13 10:22:07] 2025-10-13 14:21:27,062 | INFO     | . get job = 0 s
[2025-10-13 10:22:07] 2025-10-13 14:21:27,062 | INFO     | . initial setup = 6 s
[2025-10-13 10:22:07] 2025-10-13 14:21:27,062 | INFO     | . payload setup = 45 s
[2025-10-13 10:22:07] 2025-10-13 14:21:27,092 | INFO     | . stage-in = 0 s
[2025-10-13 10:22:07] 2025-10-13 14:21:27,092 | INFO     | . payload execution = 44294 s
[2025-10-13 10:22:07] 2025-10-13 14:21:27,093 | INFO     | . stage-out = 9 s
[2025-10-13 10:22:07] 2025-10-13 14:21:27,093 | INFO     | . log creation = 3 s
[2025-10-13 10:22:07] 2025-10-13 14:21:27,093 | INFO     | ..............................
[2025-10-13 10:22:07] 2025-10-13 14:21:27,782 | INFO     | 
[2025-10-13 10:22:07] 2025-10-13 14:21:27,782 | INFO     | job summary report
[2025-10-13 10:22:07] 2025-10-13 14:21:27,782 | INFO     | --------------------------------------------------
[2025-10-13 10:22:07] 2025-10-13 14:21:27,782 | INFO     | PanDA job id: 6840851857
[2025-10-13 10:22:07] 2025-10-13 14:21:27,782 | INFO     | task id: 46676269
[2025-10-13 10:22:07] 2025-10-13 14:21:27,787 | INFO     | errors: (none)
[2025-10-13 10:22:07] 2025-10-13 14:21:27,787 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:22:07] 2025-10-13 14:21:27,787 | INFO     | pilot state: finished 
[2025-10-13 10:22:07] 2025-10-13 14:21:27,787 | INFO     | transexitcode: 0
[2025-10-13 10:22:07] 2025-10-13 14:21:27,787 | INFO     | exeerrorcode: 0
[2025-10-13 10:22:07] 2025-10-13 14:21:27,801 | INFO     | exeerrordiag: 
[2025-10-13 10:22:07] 2025-10-13 14:21:27,801 | INFO     | exitcode: 0
[2025-10-13 10:22:07] 2025-10-13 14:21:27,801 | INFO     | exitmsg: OK
[2025-10-13 10:22:07] 2025-10-13 14:21:27,801 | INFO     | cpuconsumptiontime: 79075 s
[2025-10-13 10:22:07] 2025-10-13 14:21:27,801 | INFO     | nevents: 400
[2025-10-13 10:22:07] 2025-10-13 14:21:27,808 | INFO     | neventsw: 0
[2025-10-13 10:22:07] 2025-10-13 14:21:27,808 | INFO     | pid: 3752027
[2025-10-13 10:22:07] 2025-10-13 14:21:27,808 | INFO     | pgrp: 3752027
[2025-10-13 10:22:07] 2025-10-13 14:21:27,808 | INFO     | corecount: 9
[2025-10-13 10:22:07] 2025-10-13 14:21:27,808 | INFO     | event service: False
[2025-10-13 10:22:07] 2025-10-13 14:21:27,809 | INFO     | sizes: {0: 2348686, 1: 2348686, 2: 2348742, 3: 2348913, 15: 2348941, 26: 2348969, 32: 2349387, 37: 2349415, 44345: 2392800, 44347: 2392799, 44357: 2402189, 44408: 
[2025-10-13 10:22:07] 2025-10-13 14:21:27,809 | INFO     | --------------------------------------------------
[2025-10-13 10:22:07] 2025-10-13 14:21:27,809 | INFO     | 
[2025-10-13 10:22:07] 2025-10-13 14:21:27,809 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 10:22:07] 2025-10-13 14:21:28,129 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:22:07] 2025-10-13 14:21:28,129 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:22:07] 2025-10-13 14:21:28,129 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:22:07] 2025-10-13 14:21:28,129 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:22:07] 2025-10-13 14:21:28,130 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:22:07] 2025-10-13 14:21:28,130 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:22:07] 2025-10-13 14:21:28,130 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:22:07] 2025-10-13 14:21:28,130 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:22:07] 2025-10-13 14:21:28,130 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:22:07] 2025-10-13 14:21:28,130 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:22:07] 2025-10-13 14:21:28,131 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:22:07] 2025-10-13 14:21:28,131 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:22:07] 2025-10-13 14:21:28,131 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:22:07] 2025-10-13 14:21:28,131 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:22:07] 2025-10-13 14:21:28,131 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:22:07] 2025-10-13 14:21:28,131 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:22:07] 2025-10-13 14:21:28,132 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:22:07] 2025-10-13 14:21:28,132 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:22:07] 2025-10-13 14:21:28,132 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:22:07] 2025-10-13 14:21:28,132 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:22:07] 2025-10-13 14:21:28,132 | INFO     | job 6840851857 has completed (purged errors)
[2025-10-13 10:22:07] 2025-10-13 14:21:28,141 | INFO     | overall cleanup function is called
[2025-10-13 10:22:07] 2025-10-13 14:21:29,193 | INFO     | --- collectZombieJob: --- 10, [3752027]
[2025-10-13 10:22:07] 2025-10-13 14:21:29,193 | INFO     | zombie collector waiting for pid 3752027
[2025-10-13 10:22:07] 2025-10-13 14:21:29,193 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:22:07] 2025-10-13 14:21:29,193 | INFO     | collected zombie processes
[2025-10-13 10:22:07] 2025-10-13 14:21:29,194 | INFO     | will attempt to kill all subprocesses of pid=3752027
[2025-10-13 10:22:07] 2025-10-13 14:21:30,713 | INFO     | PID=3735511 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:22:07] 2025-10-13 14:21:30,713 | INFO     | .. there are 23 such processes running
[2025-10-13 10:22:07] 2025-10-13 14:21:31,826 | INFO     | process IDs to be killed: [3752027] (in reverse order)
[2025-10-13 10:22:07] 2025-10-13 14:21:32,215 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:22:07] 2025-10-13 14:21:32,215 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:22:07] 2025-10-13 14:21:32,255 | INFO     | did not find any defunct processes belonging to 3752027
[2025-10-13 10:22:07] 2025-10-13 14:21:32,294 | INFO     | did not find any defunct processes belonging to 3752027
[2025-10-13 10:22:07] 2025-10-13 14:21:32,294 | INFO     | ready for new job
[2025-10-13 10:22:07] 2025-10-13 14:21:32,295 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:22:07] 2025-10-13 14:21:32,302 | INFO     | ***************************************
[2025-10-13 10:22:07] 2025-10-13 14:21:32,302 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:22:07] 2025-10-13 14:21:32,303 | INFO     | ***************************************
[2025-10-13 10:22:07] 2025-10-13 14:21:32,303 | INFO     | 
[2025-10-13 10:22:07] 2025-10-13 14:21:32,305 | INFO     | architecture information:
[2025-10-13 10:22:07] 2025-10-13 14:21:32,305 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:22:07] 2025-10-13 14:21:32,346 | INFO     | cat /etc/os-release:
[2025-10-13 10:22:07] NAME="CentOS Linux"
[2025-10-13 10:22:07] VERSION="7 (Core)"
[2025-10-13 10:22:07] ID="centos"
[2025-10-13 10:22:07] ID_LIKE="rhel fedora"
[2025-10-13 10:22:07] VERSION_ID="7"
[2025-10-13 10:22:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:22:07] ANSI_COLOR="0;31"
[2025-10-13 10:22:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:22:07] HOME_URL="https://www.centos.org/"
[2025-10-13 10:22:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:22:07] 
[2025-10-13 10:22:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:22:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:22:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:22:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:22:07] 
[2025-10-13 10:22:07] 2025-10-13 14:21:32,346 | INFO     | ***************************************
[2025-10-13 10:22:07] 2025-10-13 14:21:32,852 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 10:22:07] 2025-10-13 14:21:32,917 | INFO     | sufficient remaining disk space (51890880512 B)
[2025-10-13 10:22:07] 2025-10-13 14:21:32,917 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:22:07] 2025-10-13 14:21:32,918 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:22:07] 2025-10-13 14:21:32,918 | INFO     | update_server=False
[2025-10-13 10:22:07] 2025-10-13 14:21:32,918 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:22:07] 2025-10-13 14:21:32,918 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:22:07] 2025-10-13 14:21:32,919 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:22:07] 2025-10-13 14:21:33,405 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:22:07] 2025-10-13 14:21:33,520 | INFO     | all data control threads have been joined
[2025-10-13 10:22:07] 2025-10-13 14:21:33,723 | INFO     | all job control threads have been joined
[2025-10-13 10:22:07] 2025-10-13 14:21:33,916 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:22:07] 2025-10-13 14:21:33,916 | INFO     | aborting loop
[2025-10-13 10:22:07] 2025-10-13 14:21:33,934 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:22:07] 2025-10-13 14:21:33,934 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:22:07] 2025-10-13 14:21:34,046 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:22:07] 2025-10-13 14:21:34,046 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:22:07] 2025-10-13 14:21:34,047 | INFO     | [job] validate thread has finished
[2025-10-13 10:22:07] 2025-10-13 14:21:34,165 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:22:07] 2025-10-13 14:21:34,419 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:22:07] 2025-10-13 14:21:34,464 | INFO     | all payload control threads have been joined
[2025-10-13 10:22:07] 2025-10-13 14:21:34,530 | INFO     | [data] control thread has finished
[2025-10-13 10:22:07] 2025-10-13 14:21:34,727 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:22:07] 2025-10-13 14:21:34,728 | INFO     | [job] control thread has finished
[2025-10-13 10:22:07] 2025-10-13 14:21:34,854 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:22:07] 2025-10-13 14:21:34,922 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:22:07] 2025-10-13 14:21:34,943 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:22:07] 2025-10-13 14:21:34,999 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:22:07] 2025-10-13 14:21:35,473 | INFO     | [payload] control thread has finished
[2025-10-13 10:22:07] 2025-10-13 14:21:37,429 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:22:07] 2025-10-13 14:21:39,848 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:22:07] 2025-10-13 14:21:41,281 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140641957152576)>', '<ExcThread(monitor, started 140641203885824)>']
[2025-10-13 10:22:07] 2025-10-13 14:21:46,323 | INFO     | all workflow threads have been joined
[2025-10-13 10:22:07] 2025-10-13 14:21:46,323 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:22:07] 2025-10-13 14:21:46,323 | INFO     | traces error code: 0
[2025-10-13 10:22:07] 2025-10-13 14:21:46,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:22:07] 2025-10-13 14:22:05,284 | INFO     | PID=3735511 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:22:07] 2025-10-13 14:22:05,285 | INFO     | .. there are 23 such processes running
[2025-10-13 10:22:07] 2025-10-13 14:22:05,286 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:22:07] 2025-10-13 14:22:05,286 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:22:07] 2025-10-13 14:22:05,287 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:22:07] 2025-10-13 14:22:05,287 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:22:07] 2025-10-13 14:22:05,287 | INFO     | [monitor] control thread has ended
[2025-10-13 10:22:07] 2025-10-13 14:22:06,020 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:22:07] 2025-10-13 14:22:06,023 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:22:07] 2025-10-13 14:22:06,029 [wrapper] pilotpid: 3735511
[2025-10-13 10:22:07] 2025-10-13 14:22:06,049 [wrapper] Pilot exit status: 0
[2025-10-13 10:22:07] 2025-10-13 14:22:06,140 [wrapper] pandaids: 6840851857
[2025-10-13 10:22:07] 2025-10-13 14:22:06,418 [wrapper] cleanup supervisor_pilot  726635 3735512
[2025-10-13 10:22:07] 2025-10-13 14:22:06,433 [wrapper] Test setup, not cleaning
[2025-10-13 10:22:07] 2025-10-13 14:22:06,452 [wrapper] apfmon messages muted
[2025-10-13 10:22:07] 2025-10-13 14:22:06,481 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:22:07] 2025-10-13 14:22:06,503 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:22:07]  *** Error codes and diagnostics ***
[2025-10-13 10:22:07]     "exeErrorCode": 0,
[2025-10-13 10:22:07]     "exeErrorDiag": "",
[2025-10-13 10:22:07]     "pilotErrorCode": 0,
[2025-10-13 10:22:07]     "pilotErrorDiag": "",
[2025-10-13 10:22:07]  *** Listing of results directory ***
[2025-10-13 10:22:07] total 415792
[2025-10-13 10:22:07] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 10:22:07] -rwx------. 1 boincer umatlas     36292 Oct 12 18:24 runpilot2-wrapper.sh
[2025-10-13 10:22:07] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:24 queuedata.json
[2025-10-13 10:22:07] -rw-r--r--. 1 boincer umatlas       100 Oct 12 21:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:22:07] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 21:58 run_atlas
[2025-10-13 10:22:07] -rw-r--r--. 1 boincer umatlas       105 Oct 12 21:58 job.xml
[2025-10-13 10:22:07] -rw-r--r--. 2 boincer umatlas 219964363 Oct 12 21:58 EVNT.46676267._004613.pool.root.1
[2025-10-13 10:22:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 21:58 start_atlas.sh
[2025-10-13 10:22:07] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 21:58 shared
[2025-10-13 10:22:07] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 21:58 input.tar.gz
[2025-10-13 10:22:07] -rw-r--r--. 1 boincer umatlas         0 Oct 12 21:58 boinc_lockfile
[2025-10-13 10:22:07] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 21:58 pandaJob.out
[2025-10-13 10:22:07] -rw-------. 1 boincer umatlas    975595 Oct 12 22:00 agis_schedconf.cvmfs.json
[2025-10-13 10:22:07] drwx------. 5 boincer umatlas      4096 Oct 12 22:00 pilot3
[2025-10-13 10:22:07] -rw-------. 1 boincer umatlas 190415706 Oct 13 10:18 HITS.46676269._091036.pool.root.1
[2025-10-13 10:22:07] -rw-r--r--. 1 boincer umatlas       531 Oct 13 10:19 boinc_task_state.xml
[2025-10-13 10:22:07] -rw-------. 1 boincer umatlas      1059 Oct 13 10:20 memory_monitor_summary.json
[2025-10-13 10:22:07] -rw-------. 1 boincer umatlas   1560580 Oct 13 10:20 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:22:07] -rw-------. 1 boincer umatlas    810661 Oct 13 10:20 log.46676269._091036.job.log.tgz.1
[2025-10-13 10:22:07] -rw-------. 1 boincer umatlas      7824 Oct 13 10:21 heartbeat.json
[2025-10-13 10:22:07] -rw-r--r--. 1 boincer umatlas        28 Oct 13 10:21 wrapper_checkpoint.txt
[2025-10-13 10:22:07] -rw-r--r--. 1 boincer umatlas      6523 Oct 13 10:21 init_data.xml
[2025-10-13 10:22:07] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 10:21 boinc_mmap_file
[2025-10-13 10:22:07] -rw-------. 1 boincer umatlas        95 Oct 13 10:22 pilot_heartbeat.json
[2025-10-13 10:22:07] -rw-------. 1 boincer umatlas       823 Oct 13 10:22 pilotlog.txt
[2025-10-13 10:22:07] -rw-------. 1 boincer umatlas   4946914 Oct 13 10:22 log.46676269._091036.job.log.1
[2025-10-13 10:22:07] -rw-------. 1 boincer umatlas       357 Oct 13 10:22 output.list
[2025-10-13 10:22:07] -rw-r--r--. 1 boincer umatlas       620 Oct 13 10:22 runtime_log
[2025-10-13 10:22:07] -rw-------. 1 boincer umatlas   5775360 Oct 13 10:22 result.tar.gz
[2025-10-13 10:22:07] -rw-------. 1 boincer umatlas       658 Oct 13 10:22 vGUNDmbfJS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmErlNDmNxAnHn.diag
[2025-10-13 10:22:07] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 10:22 runtime_log.err
[2025-10-13 10:22:07] -rw-r--r--. 1 boincer umatlas      2141 Oct 13 10:22 stderr.txt
[2025-10-13 10:22:07] HITS file was successfully produced:
[2025-10-13 10:22:07] -rw-------. 1 boincer umatlas 190415706 Oct 13 10:18 shared/HITS.pool.root.1
[2025-10-13 10:22:07]  *** Contents of shared directory: ***
[2025-10-13 10:22:07] total 406988
[2025-10-13 10:22:07] -rw-r--r--. 2 boincer umatlas 219964363 Oct 12 21:58 ATLAS.root_0
[2025-10-13 10:22:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 21:58 start_atlas.sh
[2025-10-13 10:22:07] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 21:58 input.tar.gz
[2025-10-13 10:22:07] -rw-------. 1 boincer umatlas 190415706 Oct 13 10:18 HITS.pool.root.1
[2025-10-13 10:22:07] -rw-------. 1 boincer umatlas   5775360 Oct 13 10:22 result.tar.gz
10:22:10 (3720092): run_atlas exited; CPU time 81145.454622
10:22:10 (3720092): called boinc_finish(0)

</stderr_txt>
]]>

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