Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:49:55 (2906037): wrapper (7.7.26015): starting
21:49:55 (2906037): wrapper: running run_atlas (--nthreads 10)
[2025-10-12 21:49:55] Arguments: --nthreads 10
[2025-10-12 21:49:55] Threads: 10
[2025-10-12 21:49:55] Checking for CVMFS
[2025-10-12 21:49:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:49:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:50:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:50:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:50:17] 2.13.2.0 929169 19396 197236 151643 1 65 18207974 32935937 23407 16776704 0 57717983 99.664 51334498 31826 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 21:50:17] CVMFS is ok
[2025-10-12 21:50:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:50:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:50:17] Further information can be found at the LHC@home message board.
[2025-10-12 21:50:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:50:17] Checking for apptainer binary...
[2025-10-12 21:50:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:50:17] Running /usr/bin/apptainer --version
[2025-10-12 21:50:17] apptainer version 1.4.3-1.el9
[2025-10-12 21:50:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:50:18] c6-4-5-2.aglt2.org
[2025-10-12 21:50:18] apptainer works
[2025-10-12 21:50:18] Set ATHENA_PROC_NUMBER=10
[2025-10-12 21:50:18] Set ATHENA_CORE_NUMBER=10
[2025-10-12 21:50:18] Starting ATLAS job with PandaID=6840749037
[2025-10-12 21:50:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:42:40]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:42:40] 2025-10-13 04:41:29,083 | INFO     | monitor loop #690: job 0:6840749037 is in state 'finished'
[2025-10-13 00:42:40] 2025-10-13 04:41:29,100 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:42:40] 2025-10-13 04:41:29,101 | INFO     | sum of deviations: 4214405351.733326
[2025-10-13 00:42:40] 2025-10-13 04:41:29,101 | INFO     | mean x: 1760325396.351515
[2025-10-13 00:42:40] 2025-10-13 04:41:29,101 | INFO     | mean y: 2197741.8666666667
[2025-10-13 00:42:40] 2025-10-13 04:41:29,102 | INFO     | -- intersect: -5323550426.22492
[2025-10-13 00:42:40] 2025-10-13 04:41:29,102 | INFO     | intersect: -5323550426.22492
[2025-10-13 00:42:40] 2025-10-13 04:41:29,102 | INFO     | chi2: 2.4167676572466763
[2025-10-13 00:42:40] 2025-10-13 04:41:29,102 | INFO     | sum of square deviations: 1270138761.7749953
[2025-10-13 00:42:40] 2025-10-13 04:41:29,103 | INFO     | sum of deviations: 15830735597.049997
[2025-10-13 00:42:40] 2025-10-13 04:41:29,103 | INFO     | mean x: 1760325243.8375
[2025-10-13 00:42:40] 2025-10-13 04:41:29,103 | INFO     | mean y: 2211894.425
[2025-10-13 00:42:40] 2025-10-13 04:41:29,103 | INFO     | -- intersect: -21938102296.963093
[2025-10-13 00:42:40] 2025-10-13 04:41:29,103 | INFO     | intersect: -21938102296.963093
[2025-10-13 00:42:40] 2025-10-13 04:41:29,103 | INFO     | chi2: 1.7260385481644
[2025-10-13 00:42:40] 2025-10-13 04:41:29,103 | INFO     | current chi2=1.7260385481644 (change=28.580699804183716 %)
[2025-10-13 00:42:40] 2025-10-13 04:41:29,104 | INFO     | sum of square deviations: 1154737982.2193549
[2025-10-13 00:42:40] 2025-10-13 04:41:29,104 | INFO     | sum of deviations: 16699920513.825813
[2025-10-13 00:42:40] 2025-10-13 04:41:29,105 | INFO     | mean x: 1760325091.3290322
[2025-10-13 00:42:40] 2025-10-13 04:41:29,110 | INFO     | mean y: 2213031.2387096775
[2025-10-13 00:42:40] 2025-10-13 04:41:29,110 | INFO     | -- intersect: -25455760601.175915
[2025-10-13 00:42:40] 2025-10-13 04:41:29,110 | INFO     | intersect: -25455760601.175915
[2025-10-13 00:42:40] 2025-10-13 04:41:29,110 | INFO     | chi2: 1.7237913295129843
[2025-10-13 00:42:40] 2025-10-13 04:41:29,111 | INFO     | current chi2=1.7237913295129843 (change=0.13019516011421717 %)
[2025-10-13 00:42:40] 2025-10-13 04:41:29,111 | INFO     | right removable region: 154
[2025-10-13 00:42:40] 2025-10-13 04:41:29,111 | INFO     | sum of square deviations: 1270154197.6937542
[2025-10-13 00:42:40] 2025-10-13 04:41:29,112 | INFO     | sum of deviations: -20520286424.118744
[2025-10-13 00:42:40] 2025-10-13 04:41:29,112 | INFO     | mean x: 1760325548.85625
[2025-10-13 00:42:40] 2025-10-13 04:41:29,112 | INFO     | mean y: 2228154.16875
[2025-10-13 00:42:40] 2025-10-13 04:41:29,112 | INFO     | -- intersect: 28441597584.913822
[2025-10-13 00:42:40] 2025-10-13 04:41:29,112 | INFO     | intersect: 28441597584.913822
[2025-10-13 00:42:40] 2025-10-13 04:41:29,112 | INFO     | chi2: 0.8921448008640693
[2025-10-13 00:42:40] 2025-10-13 04:41:29,112 | INFO     | current chi2=0.8921448008640693 (change=63.08520605243232 %)
[2025-10-13 00:42:40] 2025-10-13 04:41:29,112 | INFO     | sum of square deviations: 1154748602.0387049
[2025-10-13 00:42:40] 2025-10-13 04:41:29,113 | INFO     | sum of deviations: -17908177704.529037
[2025-10-13 00:42:40] 2025-10-13 04:41:29,113 | INFO     | mean x: 1760325701.3677418
[2025-10-13 00:42:40] 2025-10-13 04:41:29,113 | INFO     | mean y: 2224611.9741935483
[2025-10-13 00:42:40] 2025-10-13 04:41:29,113 | INFO     | -- intersect: 27301868380.57224
[2025-10-13 00:42:40] 2025-10-13 04:41:29,113 | INFO     | intersect: 27301868380.57224
[2025-10-13 00:42:40] 2025-10-13 04:41:29,116 | INFO     | chi2: 0.8617821934728138
[2025-10-13 00:42:40] 2025-10-13 04:41:29,116 | INFO     | current chi2=0.8617821934728138 (change=3.4033272807114283 %)
[2025-10-13 00:42:40] 2025-10-13 04:41:29,116 | INFO     | left removable region: 20
[2025-10-13 00:42:40] 2025-10-13 04:41:29,116 | INFO     | sum of square deviations: 746077598.3059697
[2025-10-13 00:42:40] 2025-10-13 04:41:29,117 | INFO     | sum of deviations: 1990436013.47015
[2025-10-13 00:42:40] 2025-10-13 04:41:29,117 | INFO     | mean x: 1760325670.858209
[2025-10-13 00:42:40] 2025-10-13 04:41:29,117 | INFO     | mean y: 2232562.7089552237
[2025-10-13 00:42:40] 2025-10-13 04:41:29,117 | INFO     | -- intersect: -4694082698.1538315
[2025-10-13 00:42:40] 2025-10-13 04:41:29,117 | INFO     | intersect: -4694082698.1538315
[2025-10-13 00:42:40] 2025-10-13 04:41:29,117 | INFO     | chi2: 0.027695482507628544
[2025-10-13 00:42:40] 2025-10-13 04:41:29,118 | INFO     | -- intersect: -4694082698.1538315
[2025-10-13 00:42:40] 2025-10-13 04:41:29,118 | INFO     | current memory leak: 2.67 B/s (using 134 data points, chi2=0.03)
[2025-10-13 00:42:40] 2025-10-13 04:41:29,118 | INFO     | could have reported an average CPU frequency of 2941 MHz (9 samples)
[2025-10-13 00:42:40] 2025-10-13 04:41:29,118 | INFO     | ..............................
[2025-10-13 00:42:40] 2025-10-13 04:41:29,118 | INFO     | . Timing measurements:
[2025-10-13 00:42:40] 2025-10-13 04:41:29,118 | INFO     | . get job = 0 s
[2025-10-13 00:42:40] 2025-10-13 04:41:29,118 | INFO     | . initial setup = 3 s
[2025-10-13 00:42:40] 2025-10-13 04:41:29,119 | INFO     | . payload setup = 33 s
[2025-10-13 00:42:40] 2025-10-13 04:41:29,119 | INFO     | . stage-in = 0 s
[2025-10-13 00:42:40] 2025-10-13 04:41:29,119 | INFO     | . payload execution = 10078 s
[2025-10-13 00:42:40] 2025-10-13 04:41:29,119 | INFO     | . stage-out = 2 s
[2025-10-13 00:42:40] 2025-10-13 04:41:29,119 | INFO     | . log creation = 0 s
[2025-10-13 00:42:40] 2025-10-13 04:41:29,119 | INFO     | ..............................
[2025-10-13 00:42:40] 2025-10-13 04:41:29,477 | INFO     | 
[2025-10-13 00:42:40] 2025-10-13 04:41:29,477 | INFO     | job summary report
[2025-10-13 00:42:40] 2025-10-13 04:41:29,477 | INFO     | --------------------------------------------------
[2025-10-13 00:42:40] 2025-10-13 04:41:29,477 | INFO     | PanDA job id: 6840749037
[2025-10-13 00:42:40] 2025-10-13 04:41:29,477 | INFO     | task id: 46676269
[2025-10-13 00:42:40] 2025-10-13 04:41:29,477 | INFO     | errors: (none)
[2025-10-13 00:42:40] 2025-10-13 04:41:29,477 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:42:40] 2025-10-13 04:41:29,477 | INFO     | pilot state: finished 
[2025-10-13 00:42:40] 2025-10-13 04:41:29,477 | INFO     | transexitcode: 0
[2025-10-13 00:42:40] 2025-10-13 04:41:29,478 | INFO     | exeerrorcode: 0
[2025-10-13 00:42:40] 2025-10-13 04:41:29,478 | INFO     | exeerrordiag: 
[2025-10-13 00:42:40] 2025-10-13 04:41:29,478 | INFO     | exitcode: 0
[2025-10-13 00:42:40] 2025-10-13 04:41:29,478 | INFO     | exitmsg: OK
[2025-10-13 00:42:40] 2025-10-13 04:41:29,478 | INFO     | cpuconsumptiontime: 41171 s
[2025-10-13 00:42:40] 2025-10-13 04:41:29,478 | INFO     | nevents: 400
[2025-10-13 00:42:40] 2025-10-13 04:41:29,478 | INFO     | neventsw: 0
[2025-10-13 00:42:40] 2025-10-13 04:41:29,478 | INFO     | pid: 2922203
[2025-10-13 00:42:40] 2025-10-13 04:41:29,478 | INFO     | pgrp: 2922203
[2025-10-13 00:42:40] 2025-10-13 04:41:29,478 | INFO     | corecount: 10
[2025-10-13 00:42:40] 2025-10-13 04:41:29,478 | INFO     | event service: False
[2025-10-13 00:42:40] 2025-10-13 04:41:29,478 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 13: 2348913, 24: 2348969, 29: 2349259, 35: 2349415, 10115: 2378536, 10116: 2378535, 10118: 2387589, 10120: 2387645, 101
[2025-10-13 00:42:40] 2025-10-13 04:41:29,478 | INFO     | --------------------------------------------------
[2025-10-13 00:42:40] 2025-10-13 04:41:29,478 | INFO     | 
[2025-10-13 00:42:40] 2025-10-13 04:41:29,478 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 00:42:40] 2025-10-13 04:41:29,651 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:42:40] 2025-10-13 04:41:29,651 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:42:40] 2025-10-13 04:41:29,651 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:42:40] 2025-10-13 04:41:29,651 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:42:40] 2025-10-13 04:41:29,652 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:42:40] 2025-10-13 04:41:29,652 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:42:40] 2025-10-13 04:41:29,652 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:42:40] 2025-10-13 04:41:29,652 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:42:40] 2025-10-13 04:41:29,652 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:42:40] 2025-10-13 04:41:29,652 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:42:40] 2025-10-13 04:41:29,652 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:42:40] 2025-10-13 04:41:29,652 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:42:40] 2025-10-13 04:41:29,652 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:42:40] 2025-10-13 04:41:29,652 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:42:40] 2025-10-13 04:41:29,652 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:42:40] 2025-10-13 04:41:29,652 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:42:40] 2025-10-13 04:41:29,652 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:42:40] 2025-10-13 04:41:29,652 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:42:40] 2025-10-13 04:41:29,652 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:42:40] 2025-10-13 04:41:29,653 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:42:40] 2025-10-13 04:41:29,653 | INFO     | job 6840749037 has completed (purged errors)
[2025-10-13 00:42:40] 2025-10-13 04:41:29,653 | INFO     | overall cleanup function is called
[2025-10-13 00:42:40] 2025-10-13 04:41:30,363 | INFO     | PID=2913378 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:42:40] 2025-10-13 04:41:30,363 | INFO     | .. there are 31 such processes running
[2025-10-13 00:42:40] 2025-10-13 04:41:30,717 | INFO     | --- collectZombieJob: --- 10, [2922203]
[2025-10-13 00:42:40] 2025-10-13 04:41:30,717 | INFO     | zombie collector waiting for pid 2922203
[2025-10-13 00:42:40] 2025-10-13 04:41:30,717 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:42:40] 2025-10-13 04:41:30,717 | INFO     | collected zombie processes
[2025-10-13 00:42:40] 2025-10-13 04:41:30,717 | INFO     | will attempt to kill all subprocesses of pid=2922203
[2025-10-13 00:42:40] 2025-10-13 04:41:31,682 | INFO     | process IDs to be killed: [2922203] (in reverse order)
[2025-10-13 00:42:40] 2025-10-13 04:41:31,794 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:42:40] 2025-10-13 04:41:31,794 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:42:40] 2025-10-13 04:41:31,835 | INFO     | did not find any defunct processes belonging to 2922203
[2025-10-13 00:42:40] 2025-10-13 04:41:31,915 | INFO     | did not find any defunct processes belonging to 2922203
[2025-10-13 00:42:40] 2025-10-13 04:41:31,915 | INFO     | ready for new job
[2025-10-13 00:42:40] 2025-10-13 04:41:31,915 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:42:40] 2025-10-13 04:41:31,929 | INFO     | ***************************************
[2025-10-13 00:42:40] 2025-10-13 04:41:31,929 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:42:40] 2025-10-13 04:41:31,929 | INFO     | ***************************************
[2025-10-13 00:42:40] 2025-10-13 04:41:31,929 | INFO     | 
[2025-10-13 00:42:40] 2025-10-13 04:41:31,946 | INFO     | architecture information:
[2025-10-13 00:42:40] 2025-10-13 04:41:31,961 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:42:40] 2025-10-13 04:41:32,056 | INFO     | cat /etc/os-release:
[2025-10-13 00:42:40] NAME="CentOS Linux"
[2025-10-13 00:42:40] VERSION="7 (Core)"
[2025-10-13 00:42:40] ID="centos"
[2025-10-13 00:42:40] ID_LIKE="rhel fedora"
[2025-10-13 00:42:40] VERSION_ID="7"
[2025-10-13 00:42:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:42:40] ANSI_COLOR="0;31"
[2025-10-13 00:42:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:42:40] HOME_URL="https://www.centos.org/"
[2025-10-13 00:42:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:42:40] 
[2025-10-13 00:42:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:42:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:42:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:42:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:42:40] 
[2025-10-13 00:42:40] 2025-10-13 04:41:32,056 | INFO     | ***************************************
[2025-10-13 00:42:40] 2025-10-13 04:41:32,560 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 00:42:40] 2025-10-13 04:41:32,628 | INFO     | sufficient remaining disk space (74136420352 B)
[2025-10-13 00:42:40] 2025-10-13 04:41:32,628 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:42:40] 2025-10-13 04:41:32,629 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:42:40] 2025-10-13 04:41:32,629 | INFO     | update_server=False
[2025-10-13 00:42:40] 2025-10-13 04:41:32,629 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:42:40] 2025-10-13 04:41:32,629 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:42:40] 2025-10-13 04:41:32,629 | INFO     | aborting loop
[2025-10-13 00:42:40] 2025-10-13 04:41:32,630 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:42:40] 2025-10-13 04:41:32,963 | INFO     | all payload control threads have been joined
[2025-10-13 00:42:40] 2025-10-13 04:41:33,510 | INFO     | all data control threads have been joined
[2025-10-13 00:42:40] 2025-10-13 04:41:33,635 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:42:40] 2025-10-13 04:41:33,639 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:42:40] 2025-10-13 04:41:33,727 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:42:40] 2025-10-13 04:41:33,862 | INFO     | [job] validate thread has finished
[2025-10-13 00:42:40] 2025-10-13 04:41:33,869 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:42:40] 2025-10-13 04:41:33,869 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:42:40] 2025-10-13 04:41:33,916 | INFO     | all job control threads have been joined
[2025-10-13 00:42:40] 2025-10-13 04:41:33,970 | INFO     | [payload] control thread has finished
[2025-10-13 00:42:40] 2025-10-13 04:41:34,053 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:42:40] 2025-10-13 04:41:34,302 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:42:40] 2025-10-13 04:41:34,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:42:40] 2025-10-13 04:41:34,516 | INFO     | [data] control thread has finished
[2025-10-13 00:42:40] 2025-10-13 04:41:34,807 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:42:40] 2025-10-13 04:41:34,914 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:42:40] 2025-10-13 04:41:34,922 | INFO     | [job] control thread has finished
[2025-10-13 00:42:40] 2025-10-13 04:41:35,515 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:42:40] 2025-10-13 04:41:36,059 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:42:40] 2025-10-13 04:41:36,650 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:42:40] 2025-10-13 04:41:43,486 | INFO     | job.realtimelogging is not enabled
[2025-10-13 00:42:40] 2025-10-13 04:41:44,492 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:42:40] 2025-10-13 04:42:02,985 | INFO     | PID=2913378 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:42:40] 2025-10-13 04:42:02,985 | INFO     | .. there are 31 such processes running
[2025-10-13 00:42:40] 2025-10-13 04:42:02,985 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:42:40] 2025-10-13 04:42:02,985 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:42:40] 2025-10-13 04:42:02,985 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:42:40] 2025-10-13 04:42:32,539 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:42:40] 2025-10-13 04:42:33,094 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139748076844864)>', '<ExcThread(monitor, started 139747733255936)>']
[2025-10-13 00:42:40] 2025-10-13 04:42:33,303 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:42:40] 2025-10-13 04:42:33,303 | INFO     | [monitor] control thread has ended
[2025-10-13 00:42:40] 2025-10-13 04:42:38,123 | INFO     | all workflow threads have been joined
[2025-10-13 00:42:40] 2025-10-13 04:42:38,123 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:42:40] 2025-10-13 04:42:38,123 | INFO     | traces error code: 0
[2025-10-13 00:42:40] 2025-10-13 04:42:38,123 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:42:40] 2025-10-13 04:42:38,614 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:42:40] 2025-10-13 04:42:38,636 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:42:40] 2025-10-13 04:42:38,650 [wrapper] pilotpid: 2913378
[2025-10-13 00:42:40] 2025-10-13 04:42:38,684 [wrapper] Pilot exit status: 0
[2025-10-13 00:42:40] 2025-10-13 04:42:38,853 [wrapper] pandaids: 6840749037
[2025-10-13 00:42:40] 2025-10-13 04:42:39,496 [wrapper] cleanup supervisor_pilot 3487204 2913379
[2025-10-13 00:42:40] 2025-10-13 04:42:39,517 [wrapper] Test setup, not cleaning
[2025-10-13 00:42:40] 2025-10-13 04:42:39,528 [wrapper] apfmon messages muted
[2025-10-13 00:42:40] 2025-10-13 04:42:39,547 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:42:40] 2025-10-13 04:42:39,562 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:42:40]  *** Error codes and diagnostics ***
[2025-10-13 00:42:40]     "exeErrorCode": 0,
[2025-10-13 00:42:40]     "exeErrorDiag": "",
[2025-10-13 00:42:40]     "pilotErrorCode": 0,
[2025-10-13 00:42:40]     "pilotErrorDiag": "",
[2025-10-13 00:42:40]  *** Listing of results directory ***
[2025-10-13 00:42:40] total 413180
[2025-10-13 00:42:40] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 16:08 pilot3.tar.gz
[2025-10-13 00:42:40] -rwx------. 1 boincer umatlas     36292 Oct 12 16:22 runpilot2-wrapper.sh
[2025-10-13 00:42:40] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:22 queuedata.json
[2025-10-13 00:42:40] -rw-r--r--. 1 boincer umatlas       100 Oct 12 21:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:42:40] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 21:49 run_atlas
[2025-10-13 00:42:40] -rw-r--r--. 1 boincer umatlas       105 Oct 12 21:49 job.xml
[2025-10-13 00:42:40] -rw-r--r--. 2 boincer umatlas 222009975 Oct 12 21:49 EVNT.46676267._004496.pool.root.1
[2025-10-13 00:42:40] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 21:49 input.tar.gz
[2025-10-13 00:42:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 21:49 start_atlas.sh
[2025-10-13 00:42:40] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 21:49 shared
[2025-10-13 00:42:40] -rw-r--r--. 1 boincer umatlas         0 Oct 12 21:49 boinc_lockfile
[2025-10-13 00:42:40] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 21:50 pandaJob.out
[2025-10-13 00:42:40] -rw-------. 1 boincer umatlas    975595 Oct 12 21:51 agis_schedconf.cvmfs.json
[2025-10-13 00:42:40] -rw-------. 1 boincer umatlas   1560580 Oct 12 21:51 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:42:40] drwx------. 5 boincer umatlas      4096 Oct 12 21:51 pilot3
[2025-10-13 00:42:40] -rw-r--r--. 1 boincer umatlas      6856 Oct 13 00:37 init_data.xml
[2025-10-13 00:42:40] -rw-------. 1 boincer umatlas 193555797 Oct 13 00:39 HITS.46676269._088603.pool.root.1
[2025-10-13 00:42:40] -rw-r--r--. 1 boincer umatlas       531 Oct 13 00:39 boinc_task_state.xml
[2025-10-13 00:42:40] -rw-------. 1 boincer umatlas      1043 Oct 13 00:40 memory_monitor_summary.json
[2025-10-13 00:42:40] -rw-------. 1 boincer umatlas    444521 Oct 13 00:40 log.46676269._088603.job.log.tgz.1
[2025-10-13 00:42:40] -rw-------. 1 boincer umatlas        95 Oct 13 00:41 pilot_heartbeat.json
[2025-10-13 00:42:40] -rw-------. 1 boincer umatlas      7826 Oct 13 00:41 heartbeat.json
[2025-10-13 00:42:40] -rw-------. 1 boincer umatlas      4896 Oct 13 00:42 pilotlog.txt
[2025-10-13 00:42:40] -rw-r--r--. 1 boincer umatlas        27 Oct 13 00:42 wrapper_checkpoint.txt
[2025-10-13 00:42:40] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 00:42 boinc_mmap_file
[2025-10-13 00:42:40] -rw-------. 1 boincer umatlas   1369704 Oct 13 00:42 log.46676269._088603.job.log.1
[2025-10-13 00:42:40] -rw-------. 1 boincer umatlas       357 Oct 13 00:42 output.list
[2025-10-13 00:42:40] -rw-r--r--. 1 boincer umatlas       620 Oct 13 00:42 runtime_log
[2025-10-13 00:42:40] -rw-------. 1 boincer umatlas   1832960 Oct 13 00:42 result.tar.gz
[2025-10-13 00:42:40] -rw-------. 1 boincer umatlas       655 Oct 13 00:42 YIJKDmvlHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyQlNDmzD1rRm.diag
[2025-10-13 00:42:40] -rw-r--r--. 1 boincer umatlas      8706 Oct 13 00:42 runtime_log.err
[2025-10-13 00:42:40] -rw-r--r--. 1 boincer umatlas     21206 Oct 13 00:42 stderr.txt
[2025-10-13 00:42:40] HITS file was successfully produced:
[2025-10-13 00:42:40] -rw-------. 1 boincer umatlas 193555797 Oct 13 00:39 shared/HITS.pool.root.1
[2025-10-13 00:42:40]  *** Contents of shared directory: ***
[2025-10-13 00:42:40] total 408200
[2025-10-13 00:42:40] -rw-r--r--. 2 boincer umatlas 222009975 Oct 12 21:49 ATLAS.root_0
[2025-10-13 00:42:40] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 21:49 input.tar.gz
[2025-10-13 00:42:40] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 21:49 start_atlas.sh
[2025-10-13 00:42:40] -rw-------. 1 boincer umatlas 193555797 Oct 13 00:39 HITS.pool.root.1
[2025-10-13 00:42:40] -rw-------. 1 boincer umatlas   1832960 Oct 13 00:42 result.tar.gz
00:42:42 (2906037): run_atlas exited; CPU time 41493.500631
00:42:42 (2906037): called boinc_finish(0)

</stderr_txt>
]]>

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