Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:11:16 (27578): wrapper (7.7.26015): starting
20:11:16 (27578): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:11:16] Arguments: --nthreads 8
[2025-10-12 20:11:16] Threads: 8
[2025-10-12 20:11:16] Checking for CVMFS
[2025-10-12 20:11:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:11:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:11:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:11:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:11:16] 2.11.2.0 5524 53587 125640 151641 1 57 12699914 18432000 1833 130560 0 48107645 99.975 2391076 39724 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 20:11:16] CVMFS is ok
[2025-10-12 20:11:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:11:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:11:16] Further information can be found at the LHC@home message board.
[2025-10-12 20:11:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:11:16] Checking for apptainer binary...
[2025-10-12 20:11:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:11:16] Running /usr/bin/apptainer --version
[2025-10-12 20:11:16] apptainer version 1.3.2-1.el7
[2025-10-12 20:11:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:11:17] c-206-5.aglt2.org
[2025-10-12 20:11:17] apptainer works
[2025-10-12 20:11:17] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:11:17] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:11:17] Starting ATLAS job with PandaID=6840428565
[2025-10-12 20:11:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:21:53]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:21:53] 2025-10-13 03:21:02,009 | INFO     | chi2: 1.1827939268874335
[2025-10-12 23:21:53] 2025-10-13 03:21:02,009 | INFO     | current chi2=1.1827939268874335 (change=-0.037647108191338374 %)
[2025-10-12 23:21:53] 2025-10-13 03:21:02,009 | INFO     | right removable region: 180
[2025-10-12 23:21:53] 2025-10-13 03:21:02,009 | INFO     | sum of square deviations: 1838657730.0
[2025-10-12 23:21:53] 2025-10-13 03:21:02,010 | INFO     | sum of deviations: 5642140282.999999
[2025-10-12 23:21:53] 2025-10-13 03:21:02,010 | INFO     | mean x: 1760320110.0
[2025-10-12 23:21:53] 2025-10-13 03:21:02,011 | INFO     | mean y: 2496733.276243094
[2025-10-12 23:21:53] 2025-10-13 03:21:02,011 | INFO     | -- intersect: -5399255230.427186
[2025-10-12 23:21:53] 2025-10-13 03:21:02,011 | INFO     | intersect: -5399255230.427186
[2025-10-12 23:21:53] 2025-10-13 03:21:02,011 | INFO     | chi2: 0.019097867078834034
[2025-10-12 23:21:53] 2025-10-13 03:21:02,011 | INFO     | current chi2=0.019097867078834034 (change=98.3847518625843 %)
[2025-10-12 23:21:53] 2025-10-13 03:21:02,011 | INFO     | sum of square deviations: 1690450300.0
[2025-10-12 23:21:53] 2025-10-13 03:21:02,012 | INFO     | sum of deviations: 6435933130.5
[2025-10-12 23:21:53] 2025-10-13 03:21:02,012 | INFO     | mean x: 1760320262.5
[2025-10-12 23:21:53] 2025-10-13 03:21:02,012 | INFO     | mean y: 2495897.3125
[2025-10-12 23:21:53] 2025-10-13 03:21:02,013 | INFO     | -- intersect: -6699448251.956016
[2025-10-12 23:21:53] 2025-10-13 03:21:02,013 | INFO     | intersect: -6699448251.956016
[2025-10-12 23:21:53] 2025-10-13 03:21:02,013 | INFO     | chi2: 0.00162546045091989
[2025-10-12 23:21:53] 2025-10-13 03:21:02,013 | INFO     | current chi2=0.00162546045091989 (change=91.48878540095521 %)
[2025-10-12 23:21:53] 2025-10-13 03:21:02,013 | INFO     | sum of square deviations: 1550429070.0
[2025-10-12 23:21:53] 2025-10-13 03:21:02,014 | INFO     | sum of deviations: 5110015994.000004
[2025-10-12 23:21:53] 2025-10-13 03:21:02,014 | INFO     | mean x: 1760320415.0
[2025-10-12 23:21:53] 2025-10-13 03:21:02,014 | INFO     | mean y: 2497338.2807017546
[2025-10-12 23:21:53] 2025-10-13 03:21:02,014 | INFO     | -- intersect: -5799293694.452401
[2025-10-12 23:21:53] 2025-10-13 03:21:02,015 | INFO     | intersect: -5799293694.452401
[2025-10-12 23:21:53] 2025-10-13 03:21:02,015 | INFO     | chi2: 0.0007867713042112301
[2025-10-12 23:21:53] 2025-10-13 03:21:02,015 | INFO     | current chi2=0.0007867713042112301 (change=51.59701955430685 %)
[2025-10-12 23:21:53] 2025-10-13 03:21:02,015 | INFO     | sum of square deviations: 1418361477.5
[2025-10-12 23:21:53] 2025-10-13 03:21:02,016 | INFO     | sum of deviations: 4229673998.0
[2025-10-12 23:21:53] 2025-10-13 03:21:02,016 | INFO     | mean x: 1760320567.5
[2025-10-12 23:21:53] 2025-10-13 03:21:02,016 | INFO     | mean y: 2498352.2771084337
[2025-10-12 23:21:53] 2025-10-13 03:21:02,016 | INFO     | -- intersect: -5246926600.819416
[2025-10-12 23:21:53] 2025-10-13 03:21:02,016 | INFO     | intersect: -5246926600.819416
[2025-10-12 23:21:53] 2025-10-13 03:21:02,017 | INFO     | chi2: 0.0004945298383661891
[2025-10-12 23:21:53] 2025-10-13 03:21:02,017 | INFO     | current chi2=0.0004945298383661891 (change=37.14439816002502 %)
[2025-10-12 23:21:53] 2025-10-13 03:21:02,017 | INFO     | sum of square deviations: 1294014960.0
[2025-10-12 23:21:53] 2025-10-13 03:21:02,018 | INFO     | sum of deviations: 3565627265.9999995
[2025-10-12 23:21:53] 2025-10-13 03:21:02,018 | INFO     | mean x: 1760320720.0
[2025-10-12 23:21:53] 2025-10-13 03:21:02,018 | INFO     | mean y: 2499166.354037267
[2025-10-12 23:21:53] 2025-10-13 03:21:02,018 | INFO     | -- intersect: -4848022466.051782
[2025-10-12 23:21:53] 2025-10-13 03:21:02,018 | INFO     | intersect: -4848022466.051782
[2025-10-12 23:21:53] 2025-10-13 03:21:02,018 | INFO     | chi2: 0.00037122879219807806
[2025-10-12 23:21:53] 2025-10-13 03:21:02,018 | INFO     | current chi2=0.00037122879219807806 (change=24.932984140141855 %)
[2025-10-12 23:21:53] 2025-10-13 03:21:02,019 | INFO     | left removable region: 50
[2025-10-12 23:21:53] 2025-10-13 03:21:02,019 | INFO     | sum of square deviations: 681212772.5
[2025-10-12 23:21:53] 2025-10-13 03:21:02,019 | INFO     | sum of deviations: 1332931526.5000002
[2025-10-12 23:21:53] 2025-10-13 03:21:02,019 | INFO     | mean x: 1760321299.5
[2025-10-12 23:21:53] 2025-10-13 03:21:02,020 | INFO     | mean y: 2501992.0076923077
[2025-10-12 23:21:53] 2025-10-13 03:21:02,020 | INFO     | -- intersect: -3441925140.886383
[2025-10-12 23:21:53] 2025-10-13 03:21:02,020 | INFO     | intersect: -3441925140.886383
[2025-10-12 23:21:53] 2025-10-13 03:21:02,020 | INFO     | chi2: 0.00012401028352884615
[2025-10-12 23:21:53] 2025-10-13 03:21:02,020 | INFO     | -- intersect: -3441925140.886383
[2025-10-12 23:21:53] 2025-10-13 03:21:02,020 | INFO     | current memory leak: 1.96 B/s (using 130 data points, chi2=0.00)
[2025-10-12 23:21:53] 2025-10-13 03:21:02,021 | INFO     | could have reported an average CPU frequency of 2548 MHz (10 samples)
[2025-10-12 23:21:53] 2025-10-13 03:21:02,021 | INFO     | ..............................
[2025-10-12 23:21:53] 2025-10-13 03:21:02,021 | INFO     | . Timing measurements:
[2025-10-12 23:21:53] 2025-10-13 03:21:02,021 | INFO     | . get job = 0 s
[2025-10-12 23:21:53] 2025-10-13 03:21:02,021 | INFO     | . initial setup = 2 s
[2025-10-12 23:21:53] 2025-10-13 03:21:02,021 | INFO     | . payload setup = 5 s
[2025-10-12 23:21:53] 2025-10-13 03:21:02,021 | INFO     | . stage-in = 0 s
[2025-10-12 23:21:53] 2025-10-13 03:21:02,021 | INFO     | . payload execution = 11338 s
[2025-10-12 23:21:53] 2025-10-13 03:21:02,021 | INFO     | . stage-out = 2 s
[2025-10-12 23:21:53] 2025-10-13 03:21:02,021 | INFO     | . log creation = 0 s
[2025-10-12 23:21:53] 2025-10-13 03:21:02,022 | INFO     | ..............................
[2025-10-12 23:21:53] 2025-10-13 03:21:02,578 | INFO     | 
[2025-10-12 23:21:53] 2025-10-13 03:21:02,578 | INFO     | job summary report
[2025-10-12 23:21:53] 2025-10-13 03:21:02,578 | INFO     | --------------------------------------------------
[2025-10-12 23:21:53] 2025-10-13 03:21:02,578 | INFO     | PanDA job id: 6840428565
[2025-10-12 23:21:53] 2025-10-13 03:21:02,579 | INFO     | task id: 46676269
[2025-10-12 23:21:53] 2025-10-13 03:21:02,579 | INFO     | errors: (none)
[2025-10-12 23:21:53] 2025-10-13 03:21:02,579 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:21:53] 2025-10-13 03:21:02,579 | INFO     | pilot state: finished 
[2025-10-12 23:21:53] 2025-10-13 03:21:02,579 | INFO     | transexitcode: 0
[2025-10-12 23:21:53] 2025-10-13 03:21:02,579 | INFO     | exeerrorcode: 0
[2025-10-12 23:21:53] 2025-10-13 03:21:02,580 | INFO     | exeerrordiag: 
[2025-10-12 23:21:53] 2025-10-13 03:21:02,580 | INFO     | exitcode: 0
[2025-10-12 23:21:53] 2025-10-13 03:21:02,580 | INFO     | exitmsg: OK
[2025-10-12 23:21:53] 2025-10-13 03:21:02,580 | INFO     | cpuconsumptiontime: 84278 s
[2025-10-12 23:21:53] 2025-10-13 03:21:02,580 | INFO     | nevents: 400
[2025-10-12 23:21:53] 2025-10-13 03:21:02,581 | INFO     | neventsw: 0
[2025-10-12 23:21:53] 2025-10-13 03:21:02,581 | INFO     | pid: 6109
[2025-10-12 23:21:53] 2025-10-13 03:21:02,581 | INFO     | pgrp: 6109
[2025-10-12 23:21:53] 2025-10-13 03:21:02,581 | INFO     | corecount: 8
[2025-10-12 23:21:53] 2025-10-13 03:21:02,581 | INFO     | event service: False
[2025-10-12 23:21:53] 2025-10-13 03:21:02,581 | INFO     | sizes: {0: 2348857, 1: 2348857, 4: 2349147, 11: 2349175, 11347: 2378559, 11349: 2387557, 11350: 2387741, 11357: 2387935}
[2025-10-12 23:21:53] 2025-10-13 03:21:02,582 | INFO     | --------------------------------------------------
[2025-10-12 23:21:53] 2025-10-13 03:21:02,582 | INFO     | 
[2025-10-12 23:21:53] 2025-10-13 03:21:02,582 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 23:21:53] 2025-10-13 03:21:02,602 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:21:53] 2025-10-13 03:21:02,602 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:21:53] 2025-10-13 03:21:02,602 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:21:53] 2025-10-13 03:21:02,602 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:21:53] 2025-10-13 03:21:02,603 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:21:53] 2025-10-13 03:21:02,603 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:21:53] 2025-10-13 03:21:02,603 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:21:53] 2025-10-13 03:21:02,603 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:21:53] 2025-10-13 03:21:02,603 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:21:53] 2025-10-13 03:21:02,603 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:21:53] 2025-10-13 03:21:02,604 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:21:53] 2025-10-13 03:21:02,604 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:21:53] 2025-10-13 03:21:02,604 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:21:53] 2025-10-13 03:21:02,604 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:21:53] 2025-10-13 03:21:02,604 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:21:53] 2025-10-13 03:21:02,604 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:21:53] 2025-10-13 03:21:02,605 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:21:53] 2025-10-13 03:21:02,605 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:21:53] 2025-10-13 03:21:02,605 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:21:53] 2025-10-13 03:21:02,605 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:21:53] 2025-10-13 03:21:02,605 | INFO     | job 6840428565 has completed (purged errors)
[2025-10-12 23:21:53] 2025-10-13 03:21:02,606 | INFO     | overall cleanup function is called
[2025-10-12 23:21:53] 2025-10-13 03:21:03,614 | INFO     | --- collectZombieJob: --- 10, [6109]
[2025-10-12 23:21:53] 2025-10-13 03:21:03,614 | INFO     | zombie collector waiting for pid 6109
[2025-10-12 23:21:53] 2025-10-13 03:21:03,614 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:21:53] 2025-10-13 03:21:03,614 | INFO     | collected zombie processes
[2025-10-12 23:21:53] 2025-10-13 03:21:03,614 | INFO     | will attempt to kill all subprocesses of pid=6109
[2025-10-12 23:21:53] 2025-10-13 03:21:03,780 | INFO     | process IDs to be killed: [6109] (in reverse order)
[2025-10-12 23:21:53] 2025-10-13 03:21:03,850 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:21:53] 2025-10-13 03:21:03,851 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:21:53] 2025-10-13 03:21:03,855 | INFO     | did not find any defunct processes belonging to 6109
[2025-10-12 23:21:53] 2025-10-13 03:21:03,859 | INFO     | did not find any defunct processes belonging to 6109
[2025-10-12 23:21:53] 2025-10-13 03:21:03,859 | INFO     | ready for new job
[2025-10-12 23:21:53] 2025-10-13 03:21:03,859 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:21:53] 2025-10-13 03:21:03,861 | INFO     | ***************************************
[2025-10-12 23:21:53] 2025-10-13 03:21:03,861 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:21:53] 2025-10-13 03:21:03,861 | INFO     | ***************************************
[2025-10-12 23:21:53] 2025-10-13 03:21:03,861 | INFO     | 
[2025-10-12 23:21:53] 2025-10-13 03:21:03,863 | INFO     | architecture information:
[2025-10-12 23:21:53] 2025-10-13 03:21:03,867 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:21:53] 2025-10-13 03:21:03,881 | INFO     | cat /etc/os-release:
[2025-10-12 23:21:53] NAME="CentOS Linux"
[2025-10-12 23:21:53] VERSION="7 (Core)"
[2025-10-12 23:21:53] ID="centos"
[2025-10-12 23:21:53] ID_LIKE="rhel fedora"
[2025-10-12 23:21:53] VERSION_ID="7"
[2025-10-12 23:21:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:21:53] ANSI_COLOR="0;31"
[2025-10-12 23:21:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:21:53] HOME_URL="https://www.centos.org/"
[2025-10-12 23:21:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:21:53] 
[2025-10-12 23:21:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:21:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:21:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:21:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:21:53] 
[2025-10-12 23:21:53] 2025-10-13 03:21:03,881 | INFO     | ***************************************
[2025-10-12 23:21:53] 2025-10-13 03:21:04,385 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 23:21:53] 2025-10-13 03:21:04,407 | INFO     | sufficient remaining disk space (27952939008 B)
[2025-10-12 23:21:53] 2025-10-13 03:21:04,408 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:21:53] 2025-10-13 03:21:04,408 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:21:53] 2025-10-13 03:21:04,408 | INFO     | update_server=False
[2025-10-12 23:21:53] 2025-10-13 03:21:04,408 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:21:53] 2025-10-13 03:21:04,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:21:53] 2025-10-13 03:21:05,011 | INFO     | all payload control threads have been joined
[2025-10-12 23:21:53] 2025-10-13 03:21:05,214 | INFO     | all data control threads have been joined
[2025-10-12 23:21:53] 2025-10-13 03:21:05,311 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:21:53] 2025-10-13 03:21:05,312 | INFO     | aborting loop
[2025-10-12 23:21:53] 2025-10-13 03:21:05,410 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:21:53] 2025-10-13 03:21:05,451 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:21:53] 2025-10-13 03:21:05,526 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:21:53] 2025-10-13 03:21:06,017 | INFO     | [payload] control thread has finished
[2025-10-12 23:21:53] 2025-10-13 03:21:06,055 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:21:53] 2025-10-13 03:21:06,111 | INFO     | all job control threads have been joined
[2025-10-12 23:21:53] 2025-10-13 03:21:06,160 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:21:53] 2025-10-13 03:21:06,186 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:21:53] 2025-10-13 03:21:06,187 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:21:53] 2025-10-13 03:21:06,219 | INFO     | [data] control thread has finished
[2025-10-12 23:21:53] 2025-10-13 03:21:06,317 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:21:53] 2025-10-13 03:21:06,480 | INFO     | [job] validate thread has finished
[2025-10-12 23:21:53] 2025-10-13 03:21:06,555 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:21:53] 2025-10-13 03:21:06,855 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:21:53] 2025-10-13 03:21:07,117 | INFO     | [job] control thread has finished
[2025-10-12 23:21:53] 2025-10-13 03:21:07,136 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:21:53] 2025-10-13 03:21:08,144 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:21:53] 2025-10-13 03:21:09,461 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:21:53] 2025-10-13 03:21:14,684 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:21:53] 2025-10-13 03:21:15,689 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:21:53] 2025-10-13 03:21:34,223 | INFO     | PID=31895 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 23:21:53] 2025-10-13 03:21:34,223 | INFO     | .. there are 3 such processes running
[2025-10-12 23:21:53] 2025-10-13 03:21:34,224 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:21:53] 2025-10-13 03:21:34,224 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:21:53] 2025-10-13 03:21:34,224 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:21:53] 2025-10-13 03:21:47,407 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:21:53] 2025-10-13 03:21:48,600 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139878148958016)>', '<ExcThread(monitor, started 139877840557824)>']
[2025-10-12 23:21:53] 2025-10-13 03:21:49,302 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:21:53] 2025-10-13 03:21:49,302 | INFO     | [monitor] control thread has ended
[2025-10-12 23:21:53] 2025-10-13 03:21:53,625 | INFO     | all workflow threads have been joined
[2025-10-12 23:21:53] 2025-10-13 03:21:53,625 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:21:53] 2025-10-13 03:21:53,626 | INFO     | traces error code: 0
[2025-10-12 23:21:53] 2025-10-13 03:21:53,626 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:21:53] 2025-10-13 03:21:53,723 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:21:53] 2025-10-13 03:21:53,725 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:21:53] 2025-10-13 03:21:53,727 [wrapper] pilotpid: 31895
[2025-10-12 23:21:53] 2025-10-13 03:21:53,729 [wrapper] Pilot exit status: 0
[2025-10-12 23:21:53] 2025-10-13 03:21:53,738 [wrapper] pandaids: 6840428565
[2025-10-12 23:21:53] 2025-10-13 03:21:53,777 [wrapper] cleanup supervisor_pilot  3054 31896
[2025-10-12 23:21:53] 2025-10-13 03:21:53,779 [wrapper] Test setup, not cleaning
[2025-10-12 23:21:53] 2025-10-13 03:21:53,783 [wrapper] apfmon messages muted
[2025-10-12 23:21:53] 2025-10-13 03:21:53,785 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:21:53] 2025-10-13 03:21:53,788 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:21:53]  *** Error codes and diagnostics ***
[2025-10-12 23:21:53]     "exeErrorCode": 0,
[2025-10-12 23:21:53]     "exeErrorDiag": "",
[2025-10-12 23:21:53]     "pilotErrorCode": 0,
[2025-10-12 23:21:53]     "pilotErrorDiag": "",
[2025-10-12 23:21:53]  *** Listing of results directory ***
[2025-10-12 23:21:53] total 416752
[2025-10-12 23:21:53] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 12:49 pilot3.tar.gz
[2025-10-12 23:21:53] -rwx------ 1 boincer umatlas     36292 Oct 12 12:54 runpilot2-wrapper.sh
[2025-10-12 23:21:53] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 12:54 queuedata.json
[2025-10-12 23:21:53] -rw-r--r-- 1 boincer umatlas       100 Oct 12 20:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:21:53] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 20:11 run_atlas
[2025-10-12 23:21:53] -rw-r--r-- 1 boincer umatlas       105 Oct 12 20:11 job.xml
[2025-10-12 23:21:53] -rw-r--r-- 2 boincer umatlas 219577043 Oct 12 20:11 EVNT.46676267._004791.pool.root.1
[2025-10-12 23:21:53] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:11 start_atlas.sh
[2025-10-12 23:21:53] drwxrwx--x 2 boincer umatlas      4096 Oct 12 20:11 shared
[2025-10-12 23:21:53] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 20:11 input.tar.gz
[2025-10-12 23:21:53] -rw-r--r-- 1 boincer umatlas         0 Oct 12 20:11 boinc_lockfile
[2025-10-12 23:21:53] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 20:11 pandaJob.out
[2025-10-12 23:21:53] -rw------- 1 boincer umatlas    975603 Oct 12 20:11 agis_schedconf.cvmfs.json
[2025-10-12 23:21:53] drwx------ 5 boincer umatlas      4096 Oct 12 20:11 pilot3
[2025-10-12 23:21:53] -rw------- 1 boincer umatlas 199195234 Oct 12 23:20 HITS.46676269._084167.pool.root.1
[2025-10-12 23:21:53] -rw-r--r-- 1 boincer umatlas       530 Oct 12 23:20 boinc_task_state.xml
[2025-10-12 23:21:53] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 23:20 init_data.xml
[2025-10-12 23:21:53] -rw------- 1 boincer umatlas      1054 Oct 12 23:20 memory_monitor_summary.json
[2025-10-12 23:21:53] -rw------- 1 boincer umatlas   1560580 Oct 12 23:20 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:21:53] -rw------- 1 boincer umatlas    432151 Oct 12 23:20 log.46676269._084167.job.log.tgz.1
[2025-10-12 23:21:53] -rw------- 1 boincer umatlas      7857 Oct 12 23:21 heartbeat.json
[2025-10-12 23:21:53] -rw------- 1 boincer umatlas        95 Oct 12 23:21 pilot_heartbeat.json
[2025-10-12 23:21:53] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 23:21 boinc_mmap_file
[2025-10-12 23:21:53] -rw-r--r-- 1 boincer umatlas        28 Oct 12 23:21 wrapper_checkpoint.txt
[2025-10-12 23:21:53] -rw------- 1 boincer umatlas      4893 Oct 12 23:21 pilotlog.txt
[2025-10-12 23:21:53] -rw------- 1 boincer umatlas   1602558 Oct 12 23:21 log.46676269._084167.job.log.1
[2025-10-12 23:21:53] -rw------- 1 boincer umatlas       357 Oct 12 23:21 output.list
[2025-10-12 23:21:53] -rw-r--r-- 1 boincer umatlas       620 Oct 12 23:21 runtime_log
[2025-10-12 23:21:53] -rw------- 1 boincer umatlas   2058240 Oct 12 23:21 result.tar.gz
[2025-10-12 23:21:53] -rw-r--r-- 1 boincer umatlas      8699 Oct 12 23:21 runtime_log.err
[2025-10-12 23:21:53] -rw------- 1 boincer umatlas       661 Oct 12 23:21 EgQNDmMWES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNkkNDmSdwx5n.diag
[2025-10-12 23:21:53] -rw-r--r-- 1 boincer umatlas     20922 Oct 12 23:21 stderr.txt
[2025-10-12 23:21:53] HITS file was successfully produced:
[2025-10-12 23:21:53] -rw------- 1 boincer umatlas 199195234 Oct 12 23:20 shared/HITS.pool.root.1
[2025-10-12 23:21:53]  *** Contents of shared directory: ***
[2025-10-12 23:21:53] total 411556
[2025-10-12 23:21:53] -rw-r--r-- 2 boincer umatlas 219577043 Oct 12 20:11 ATLAS.root_0
[2025-10-12 23:21:53] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:11 start_atlas.sh
[2025-10-12 23:21:53] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 20:11 input.tar.gz
[2025-10-12 23:21:53] -rw------- 1 boincer umatlas 199195234 Oct 12 23:20 HITS.pool.root.1
[2025-10-12 23:21:53] -rw------- 1 boincer umatlas   2058240 Oct 12 23:21 result.tar.gz
23:21:55 (27578): run_atlas exited; CPU time 84409.541968
23:21:55 (27578): called boinc_finish(0)

</stderr_txt>
]]>

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