Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:15:09 (11634): wrapper (7.7.26015): starting
20:15:09 (11634): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 20:15:09] Arguments: --nthreads 12
[2025-10-12 20:15:09] Threads: 12
[2025-10-12 20:15:09] Checking for CVMFS
[2025-10-12 20:15:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:15:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:15:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:15:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:15:10] 2.11.2.0 3165 9209 86056 151641 0 57 12286430 20275200 1 130560 0 8985671 99.993 304069 43302 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 20:15:10] CVMFS is ok
[2025-10-12 20:15:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:15:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:15:10] Further information can be found at the LHC@home message board.
[2025-10-12 20:15:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:15:10] Checking for apptainer binary...
[2025-10-12 20:15:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:15:10] Running /usr/bin/apptainer --version
[2025-10-12 20:15:10] apptainer version 1.3.2-1.el7
[2025-10-12 20:15:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:15:11] c-115-40.aglt2.org
[2025-10-12 20:15:11] apptainer works
[2025-10-12 20:15:11] Set ATHENA_PROC_NUMBER=12
[2025-10-12 20:15:11] Set ATHENA_CORE_NUMBER=12
[2025-10-12 20:15:11] Starting ATLAS job with PandaID=6840713031
[2025-10-12 20:15:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:21:40]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:21:40]  status=None
[2025-10-12 21:21:40]  status_code=0
[2025-10-12 21:21:40]  storage_token=
[2025-10-12 21:21:40]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840713031/log.46676269._087544.job.log.tgz.1
[2025-10-12 21:21:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/13/log.46676269._087544.job.log.tgz.1
[2025-10-12 21:21:40]  workdir=None
[2025-10-12 21:21:40] ]
[2025-10-12 21:21:40] 2025-10-13 01:21:12,991 | INFO     | transferring file log.46676269._087544.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840713031/log.46676269._087544.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 21:21:40] 2025-10-13 01:21:12,991 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840713031/log.46676269._087544.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._087544.job
[2025-10-12 21:21:40] 2025-10-13 01:21:13,013 | INFO     | adding to output.list: log.46676269._087544.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/33/13/log.46676269._087544.job.log.tg
[2025-10-12 21:21:40] 2025-10-13 01:21:13,014 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 21:21:40] 2025-10-13 01:21:13,014 | INFO     | summary of transferred files:
[2025-10-12 21:21:40] 2025-10-13 01:21:13,014 | INFO     |  -- lfn=log.46676269._087544.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 21:21:40] 2025-10-13 01:21:13,015 | INFO     | stage-out finished correctly
[2025-10-12 21:21:40] 2025-10-13 01:21:14,069 | INFO     | time since job start (3948s) is within the limit (172800.0s)
[2025-10-12 21:21:40] 2025-10-13 01:21:14,092 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 21:21:40] 2025-10-13 01:21:14,412 | INFO     | monitor loop #297: job 0:6840713031 is in state 'finished'
[2025-10-12 21:21:40] 2025-10-13 01:21:14,412 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:21:40] 2025-10-13 01:21:15,374 | INFO     | job 6840713031 has state=finished
[2025-10-12 21:21:40] 2025-10-13 01:21:15,375 | INFO     | preparing for final server update for job 6840713031 in state='finished'
[2025-10-12 21:21:40] 2025-10-13 01:21:15,375 | INFO     | this job has now completed (state=finished)
[2025-10-12 21:21:40] 2025-10-13 01:21:15,375 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 21:21:40] 2025-10-13 01:21:15,376 | INFO     | log transfer has been attempted: DONE
[2025-10-12 21:21:40] 2025-10-13 01:21:15,376 | INFO     | job 6840713031 has finished - writing final server update
[2025-10-12 21:21:40] 2025-10-13 01:21:15,376 | INFO     | total number of processed events: 400 (read)
[2025-10-12 21:21:40] 2025-10-13 01:21:15,377 | INFO     | executing command: lscpu
[2025-10-12 21:21:40] 2025-10-13 01:21:15,404 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 21:21:40] 2025-10-13 01:21:16,073 | INFO     | time since job start (3950s) is within the limit (172800.0s)
[2025-10-12 21:21:40] 2025-10-13 01:21:16,915 | INFO     | monitor loop #298: job 0:6840713031 is in state 'finished'
[2025-10-12 21:21:40] 2025-10-13 01:21:16,916 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:21:40] 2025-10-13 01:21:18,078 | INFO     | time since job start (3952s) is within the limit (172800.0s)
[2025-10-12 21:21:40] 2025-10-13 01:21:19,419 | INFO     | monitor loop #299: job 0:6840713031 is in state 'finished'
[2025-10-12 21:21:40] 2025-10-13 01:21:19,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:21:40] 2025-10-13 01:21:20,036 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 21:21:40] 2025-10-13 01:21:20,039 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1751.25
[2025-10-12 21:21:40] 2025-10-13 01:21:20,042 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840713031/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:21:40] 2025-10-13 01:21:20,043 | INFO     | extracted standard info from prmon json
[2025-10-12 21:21:40] 2025-10-13 01:21:20,043 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 21:21:40] 2025-10-13 01:21:20,043 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:21:40] 2025-10-13 01:21:20,043 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:21:40] 2025-10-13 01:21:20,044 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:21:40] 2025-10-13 01:21:20,045 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:21:40] 2025-10-13 01:21:20,045 | INFO     | sum of square deviations: 60482994.5
[2025-10-12 21:21:40] 2025-10-13 01:21:20,045 | INFO     | sum of deviations: 1398737533.5
[2025-10-12 21:21:40] 2025-10-13 01:21:20,046 | INFO     | mean x: 1760316597.5
[2025-10-12 21:21:40] 2025-10-13 01:21:20,046 | INFO     | mean y: 2739933.1551724137
[2025-10-12 21:21:40] 2025-10-13 01:21:20,046 | INFO     | -- intersect: -40706568792.72582
[2025-10-12 21:21:40] 2025-10-13 01:21:20,046 | INFO     | intersect: -40706568792.72582
[2025-10-12 21:21:40] 2025-10-13 01:21:20,046 | INFO     | chi2: 0.008890634649655088
[2025-10-12 21:21:40] 2025-10-13 01:21:20,046 | INFO     | -- intersect: -40706568792.72582
[2025-10-12 21:21:40] 2025-10-13 01:21:20,046 | INFO     | current memory leak: 23.13 B/s (using 58 data points, chi2=0.01)
[2025-10-12 21:21:40] 2025-10-13 01:21:20,047 | INFO     | could have reported an average CPU frequency of 2161 MHz (6 samples)
[2025-10-12 21:21:40] 2025-10-13 01:21:20,047 | INFO     | ..............................
[2025-10-12 21:21:40] 2025-10-13 01:21:20,047 | INFO     | . Timing measurements:
[2025-10-12 21:21:40] 2025-10-13 01:21:20,047 | INFO     | . get job = 0 s
[2025-10-12 21:21:40] 2025-10-13 01:21:20,047 | INFO     | . initial setup = 2 s
[2025-10-12 21:21:40] 2025-10-13 01:21:20,047 | INFO     | . payload setup = 7 s
[2025-10-12 21:21:40] 2025-10-13 01:21:20,047 | INFO     | . stage-in = 0 s
[2025-10-12 21:21:40] 2025-10-13 01:21:20,047 | INFO     | . payload execution = 3919 s
[2025-10-12 21:21:40] 2025-10-13 01:21:20,047 | INFO     | . stage-out = 0 s
[2025-10-12 21:21:40] 2025-10-13 01:21:20,047 | INFO     | . log creation = 0 s
[2025-10-12 21:21:40] 2025-10-13 01:21:20,048 | INFO     | ..............................
[2025-10-12 21:21:40] 2025-10-13 01:21:20,086 | INFO     | time since job start (3954s) is within the limit (172800.0s)
[2025-10-12 21:21:40] 2025-10-13 01:21:20,124 | INFO     | 
[2025-10-12 21:21:40] 2025-10-13 01:21:20,124 | INFO     | job summary report
[2025-10-12 21:21:40] 2025-10-13 01:21:20,125 | INFO     | --------------------------------------------------
[2025-10-12 21:21:40] 2025-10-13 01:21:20,125 | INFO     | PanDA job id: 6840713031
[2025-10-12 21:21:40] 2025-10-13 01:21:20,125 | INFO     | task id: 46676269
[2025-10-12 21:21:40] 2025-10-13 01:21:20,125 | INFO     | errors: (none)
[2025-10-12 21:21:40] 2025-10-13 01:21:20,125 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:21:40] 2025-10-13 01:21:20,125 | INFO     | pilot state: finished 
[2025-10-12 21:21:40] 2025-10-13 01:21:20,126 | INFO     | transexitcode: 0
[2025-10-12 21:21:40] 2025-10-13 01:21:20,126 | INFO     | exeerrorcode: 0
[2025-10-12 21:21:40] 2025-10-13 01:21:20,126 | INFO     | exeerrordiag: 
[2025-10-12 21:21:40] 2025-10-13 01:21:20,126 | INFO     | exitcode: 0
[2025-10-12 21:21:40] 2025-10-13 01:21:20,126 | INFO     | exitmsg: OK
[2025-10-12 21:21:40] 2025-10-13 01:21:20,126 | INFO     | cpuconsumptiontime: 41143 s
[2025-10-12 21:21:40] 2025-10-13 01:21:20,126 | INFO     | nevents: 400
[2025-10-12 21:21:40] 2025-10-13 01:21:20,127 | INFO     | neventsw: 0
[2025-10-12 21:21:40] 2025-10-13 01:21:20,127 | INFO     | pid: 21775
[2025-10-12 21:21:40] 2025-10-13 01:21:20,127 | INFO     | pgrp: 21775
[2025-10-12 21:21:40] 2025-10-13 01:21:20,127 | INFO     | corecount: 12
[2025-10-12 21:21:40] 2025-10-13 01:21:20,127 | INFO     | event service: False
[2025-10-12 21:21:40] 2025-10-13 01:21:20,127 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 3930: 2383986, 3932: 2383986, 3937: 2384180}
[2025-10-12 21:21:40] 2025-10-13 01:21:20,128 | INFO     | --------------------------------------------------
[2025-10-12 21:21:40] 2025-10-13 01:21:20,128 | INFO     | 
[2025-10-12 21:21:40] 2025-10-13 01:21:20,128 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 21:21:40] 2025-10-13 01:21:20,153 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:21:40] 2025-10-13 01:21:20,153 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:21:40] 2025-10-13 01:21:20,153 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:21:40] 2025-10-13 01:21:20,153 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:21:40] 2025-10-13 01:21:20,154 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:21:40] 2025-10-13 01:21:20,154 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:21:40] 2025-10-13 01:21:20,154 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:21:40] 2025-10-13 01:21:20,154 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:21:40] 2025-10-13 01:21:20,154 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:21:40] 2025-10-13 01:21:20,154 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:21:40] 2025-10-13 01:21:20,155 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:21:40] 2025-10-13 01:21:20,155 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:21:40] 2025-10-13 01:21:20,155 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:21:40] 2025-10-13 01:21:20,155 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:21:40] 2025-10-13 01:21:20,155 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:21:40] 2025-10-13 01:21:20,155 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:21:40] 2025-10-13 01:21:20,155 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:21:40] 2025-10-13 01:21:20,156 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:21:40] 2025-10-13 01:21:20,156 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:21:40] 2025-10-13 01:21:20,156 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:21:40] 2025-10-13 01:21:20,156 | INFO     | job 6840713031 has completed (purged errors)
[2025-10-12 21:21:40] 2025-10-13 01:21:20,156 | INFO     | overall cleanup function is called
[2025-10-12 21:21:40] 2025-10-13 01:21:21,164 | INFO     | --- collectZombieJob: --- 10, [21775]
[2025-10-12 21:21:40] 2025-10-13 01:21:21,164 | INFO     | zombie collector waiting for pid 21775
[2025-10-12 21:21:40] 2025-10-13 01:21:21,164 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:21:40] 2025-10-13 01:21:21,165 | INFO     | collected zombie processes
[2025-10-12 21:21:40] 2025-10-13 01:21:21,165 | INFO     | will attempt to kill all subprocesses of pid=21775
[2025-10-12 21:21:40] 2025-10-13 01:21:21,255 | INFO     | process IDs to be killed: [21775] (in reverse order)
[2025-10-12 21:21:40] 2025-10-13 01:21:21,309 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:21:40] 2025-10-13 01:21:21,309 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:21:40] 2025-10-13 01:21:21,313 | INFO     | did not find any defunct processes belonging to 21775
[2025-10-12 21:21:40] 2025-10-13 01:21:21,316 | INFO     | did not find any defunct processes belonging to 21775
[2025-10-12 21:21:40] 2025-10-13 01:21:21,316 | INFO     | ready for new job
[2025-10-12 21:21:40] 2025-10-13 01:21:21,316 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:21:40] 2025-10-13 01:21:21,317 | INFO     | ***************************************
[2025-10-12 21:21:40] 2025-10-13 01:21:21,317 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:21:40] 2025-10-13 01:21:21,318 | INFO     | ***************************************
[2025-10-12 21:21:40] 2025-10-13 01:21:21,318 | INFO     | 
[2025-10-12 21:21:40] 2025-10-13 01:21:21,318 | INFO     | architecture information:
[2025-10-12 21:21:40] 2025-10-13 01:21:21,319 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:21:40] 2025-10-13 01:21:21,335 | INFO     | cat /etc/os-release:
[2025-10-12 21:21:40] NAME="CentOS Linux"
[2025-10-12 21:21:40] VERSION="7 (Core)"
[2025-10-12 21:21:40] ID="centos"
[2025-10-12 21:21:40] ID_LIKE="rhel fedora"
[2025-10-12 21:21:40] VERSION_ID="7"
[2025-10-12 21:21:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:21:40] ANSI_COLOR="0;31"
[2025-10-12 21:21:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:21:40] HOME_URL="https://www.centos.org/"
[2025-10-12 21:21:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:21:40] 
[2025-10-12 21:21:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:21:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:21:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:21:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:21:40] 
[2025-10-12 21:21:40] 2025-10-13 01:21:21,335 | INFO     | ***************************************
[2025-10-12 21:21:40] 2025-10-13 01:21:21,839 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 21:21:40] 2025-10-13 01:21:21,856 | INFO     | sufficient remaining disk space (18703450112 B)
[2025-10-12 21:21:40] 2025-10-13 01:21:21,857 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:21:40] 2025-10-13 01:21:21,857 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:21:40] 2025-10-13 01:21:21,857 | INFO     | update_server=False
[2025-10-12 21:21:40] 2025-10-13 01:21:21,857 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:21:40] 2025-10-13 01:21:21,858 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:21:40] 2025-10-13 01:21:21,858 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 21:21:40] 2025-10-13 01:21:21,858 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:21:40] 2025-10-13 01:21:21,859 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:21:40] 2025-10-13 01:21:21,859 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:21:40] 2025-10-13 01:21:21,859 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:21:40] 2025-10-13 01:21:21,917 | INFO     | all data control threads have been joined
[2025-10-12 21:21:40] 2025-10-13 01:21:21,922 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 21:21:40] 2025-10-13 01:21:21,923 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 21:21:40] 2025-10-13 01:21:21,923 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:21:40] 2025-10-13 01:21:21,923 | INFO     | will abort loop
[2025-10-12 21:21:40] 2025-10-13 01:21:22,842 | INFO     | all payload control threads have been joined
[2025-10-12 21:21:40] 2025-10-13 01:21:22,863 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:21:40] 2025-10-13 01:21:22,864 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:21:40] 2025-10-13 01:21:22,874 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:21:40] 2025-10-13 01:21:22,893 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:21:40] 2025-10-13 01:21:22,923 | INFO     | [data] control thread has finished
[2025-10-12 21:21:40] 2025-10-13 01:21:22,928 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:21:40] 2025-10-13 01:21:23,143 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:21:40] 2025-10-13 01:21:23,206 | INFO     | all job control threads have been joined
[2025-10-12 21:21:40] 2025-10-13 01:21:23,616 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:21:40] 2025-10-13 01:21:23,716 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:21:40] 2025-10-13 01:21:23,847 | INFO     | [payload] control thread has finished
[2025-10-12 21:21:40] 2025-10-13 01:21:23,863 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:21:40] 2025-10-13 01:21:23,913 | INFO     | [job] validate thread has finished
[2025-10-12 21:21:40] 2025-10-13 01:21:24,211 | INFO     | [job] control thread has finished
[2025-10-12 21:21:40] 2025-10-13 01:21:24,219 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:21:40] 2025-10-13 01:21:24,675 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:21:40] 2025-10-13 01:21:28,677 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:21:40] 2025-10-13 01:21:31,744 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:21:40] 2025-10-13 01:21:32,485 | INFO     | job.realtimelogging is not enabled
[2025-10-12 21:21:40] 2025-10-13 01:21:33,490 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:21:40] 2025-10-13 01:21:35,400 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140230998333248)>', '<ExcThread(monitor, started 140229667186432)>']
[2025-10-12 21:21:40] 2025-10-13 01:21:35,927 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:21:40] 2025-10-13 01:21:35,927 | INFO     | [monitor] control thread has ended
[2025-10-12 21:21:40] 2025-10-13 01:21:40,407 | INFO     | all workflow threads have been joined
[2025-10-12 21:21:40] 2025-10-13 01:21:40,407 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:21:40] 2025-10-13 01:21:40,417 | INFO     | traces error code: 0
[2025-10-12 21:21:40] 2025-10-13 01:21:40,417 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:21:40] 2025-10-13 01:21:40,490 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:21:40] 2025-10-13 01:21:40,494 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:21:40] 2025-10-13 01:21:40,498 [wrapper] pilotpid: 15325
[2025-10-12 21:21:40] 2025-10-13 01:21:40,501 [wrapper] Pilot exit status: 0
[2025-10-12 21:21:40] 2025-10-13 01:21:40,516 [wrapper] pandaids: 6840713031
[2025-10-12 21:21:40] 2025-10-13 01:21:40,554 [wrapper] cleanup supervisor_pilot 19621 15326
[2025-10-12 21:21:40] 2025-10-13 01:21:40,558 [wrapper] Test setup, not cleaning
[2025-10-12 21:21:40] 2025-10-13 01:21:40,561 [wrapper] apfmon messages muted
[2025-10-12 21:21:40] 2025-10-13 01:21:40,565 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:21:40] 2025-10-13 01:21:40,569 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:21:40]  *** Error codes and diagnostics ***
[2025-10-12 21:21:40]     "exeErrorCode": 0,
[2025-10-12 21:21:40]     "exeErrorDiag": "",
[2025-10-12 21:21:40]     "pilotErrorCode": 0,
[2025-10-12 21:21:40]     "pilotErrorDiag": "",
[2025-10-12 21:21:40]  *** Listing of results directory ***
[2025-10-12 21:21:40] total 414060
[2025-10-12 21:21:40] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 15:28 pilot3.tar.gz
[2025-10-12 21:21:40] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 15:33 queuedata.json
[2025-10-12 21:21:40] -rwx------ 1 boincer umatlas     36292 Oct 12 15:34 runpilot2-wrapper.sh
[2025-10-12 21:21:40] -rw-r--r-- 1 boincer umatlas       100 Oct 12 20:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:21:40] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 20:15 run_atlas
[2025-10-12 21:21:40] -rw-r--r-- 1 boincer umatlas       105 Oct 12 20:15 job.xml
[2025-10-12 21:21:40] -rw-r--r-- 2 boincer umatlas 219296950 Oct 12 20:15 EVNT.46676267._004456.pool.root.1
[2025-10-12 21:21:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:15 start_atlas.sh
[2025-10-12 21:21:40] drwxrwx--x 2 boincer umatlas      4096 Oct 12 20:15 shared
[2025-10-12 21:21:40] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 20:15 input.tar.gz
[2025-10-12 21:21:40] -rw-r--r-- 1 boincer umatlas         0 Oct 12 20:15 boinc_lockfile
[2025-10-12 21:21:40] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 20:15 pandaJob.out
[2025-10-12 21:21:40] -rw------- 1 boincer umatlas    975603 Oct 12 20:15 agis_schedconf.cvmfs.json
[2025-10-12 21:21:40] -rw------- 1 boincer umatlas   1560580 Oct 12 20:15 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:21:40] drwx------ 5 boincer umatlas      4096 Oct 12 20:15 pilot3
[2025-10-12 21:21:40] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 21:19 init_data.xml
[2025-10-12 21:21:40] -rw-r--r-- 1 boincer umatlas       529 Oct 12 21:20 boinc_task_state.xml
[2025-10-12 21:21:40] -rw------- 1 boincer umatlas 198867663 Oct 12 21:20 HITS.46676269._087544.pool.root.1
[2025-10-12 21:21:40] -rw------- 1 boincer umatlas      1050 Oct 12 21:21 memory_monitor_summary.json
[2025-10-12 21:21:40] -rw------- 1 boincer umatlas    378368 Oct 12 21:21 log.46676269._087544.job.log.tgz.1
[2025-10-12 21:21:40] -rw-r--r-- 1 boincer umatlas        27 Oct 12 21:21 wrapper_checkpoint.txt
[2025-10-12 21:21:40] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 21:21 boinc_mmap_file
[2025-10-12 21:21:40] -rw------- 1 boincer umatlas        95 Oct 12 21:21 pilot_heartbeat.json
[2025-10-12 21:21:40] -rw------- 1 boincer umatlas      7852 Oct 12 21:21 heartbeat.json
[2025-10-12 21:21:40] -rw------- 1 boincer umatlas      4810 Oct 12 21:21 pilotlog.txt
[2025-10-12 21:21:40] -rw------- 1 boincer umatlas    583160 Oct 12 21:21 log.46676269._087544.job.log.1
[2025-10-12 21:21:40] -rw------- 1 boincer umatlas       357 Oct 12 21:21 output.list
[2025-10-12 21:21:40] -rw-r--r-- 1 boincer umatlas       620 Oct 12 21:21 runtime_log
[2025-10-12 21:21:40] -rw------- 1 boincer umatlas    983040 Oct 12 21:21 result.tar.gz
[2025-10-12 21:21:40] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 21:21 runtime_log.err
[2025-10-12 21:21:40] -rw------- 1 boincer umatlas       659 Oct 12 21:21 lAfKDmq0GS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmnpUMDmkmdG1n.diag
[2025-10-12 21:21:40] -rw-r--r-- 1 boincer umatlas     21857 Oct 12 21:21 stderr.txt
[2025-10-12 21:21:40] HITS file was successfully produced:
[2025-10-12 21:21:40] -rw------- 1 boincer umatlas 198867663 Oct 12 21:20 shared/HITS.pool.root.1
[2025-10-12 21:21:40]  *** Contents of shared directory: ***
[2025-10-12 21:21:40] total 409912
[2025-10-12 21:21:40] -rw-r--r-- 2 boincer umatlas 219296950 Oct 12 20:15 ATLAS.root_0
[2025-10-12 21:21:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:15 start_atlas.sh
[2025-10-12 21:21:40] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 20:15 input.tar.gz
[2025-10-12 21:21:40] -rw------- 1 boincer umatlas 198867663 Oct 12 21:20 HITS.pool.root.1
[2025-10-12 21:21:40] -rw------- 1 boincer umatlas    983040 Oct 12 21:21 result.tar.gz
21:21:42 (11634): run_atlas exited; CPU time 41140.244891
21:21:42 (11634): called boinc_finish(0)

</stderr_txt>
]]>

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