Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:11:20 (27119): wrapper (7.7.26015): starting
20:11:20 (27119): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 20:11:20] Arguments: --nthreads 12
[2025-10-12 20:11:20] Threads: 12
[2025-10-12 20:11:20] Checking for CVMFS
[2025-10-12 20:11:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:11:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:11:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:11:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:11:20] 2.11.2.0 2925 223585 102340 151641 0 57 16807689 20275201 1 130560 1 110740588 99.984 13323145 12647 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 20:11:20] CVMFS is ok
[2025-10-12 20:11:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:11:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:11:20] Further information can be found at the LHC@home message board.
[2025-10-12 20:11:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:11:20] Checking for apptainer binary...
[2025-10-12 20:11:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:11:20] Running /usr/bin/apptainer --version
[2025-10-12 20:11:20] apptainer version 1.3.2-1.el7
[2025-10-12 20:11:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:11:22] c-205-9.aglt2.org
[2025-10-12 20:11:22] apptainer works
[2025-10-12 20:11:22] Set ATHENA_PROC_NUMBER=12
[2025-10-12 20:11:22] Set ATHENA_CORE_NUMBER=12
[2025-10-12 20:11:22] Starting ATLAS job with PandaID=6840715192
[2025-10-12 20:11:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:26:49]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:26:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ec/82/log.46676269._088144.job.log.tgz.1
[2025-10-12 21:26:49]  workdir=None
[2025-10-12 21:26:49] ]
[2025-10-12 21:26:49] 2025-10-13 01:25:38,644 | INFO     | transferring file log.46676269._088144.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840715192/log.46676269._088144.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 21:26:49] 2025-10-13 01:25:38,644 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840715192/log.46676269._088144.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._088144.job
[2025-10-12 21:26:49] 2025-10-13 01:25:38,651 | INFO     | number of running child processes to parent process 4935: 1
[2025-10-12 21:26:49] 2025-10-13 01:25:38,651 | INFO     | maximum number of monitored processes: 6
[2025-10-12 21:26:49] 2025-10-13 01:25:38,673 | INFO     | adding to output.list: log.46676269._088144.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ec/82/log.46676269._088144.job.log.tg
[2025-10-12 21:26:49] 2025-10-13 01:25:38,758 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 21:26:49] 2025-10-13 01:25:38,758 | INFO     | summary of transferred files:
[2025-10-12 21:26:49] 2025-10-13 01:25:38,758 | INFO     |  -- lfn=log.46676269._088144.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 21:26:49] 2025-10-13 01:25:38,759 | INFO     | stage-out finished correctly
[2025-10-12 21:26:49] 2025-10-13 01:25:38,947 | INFO     | time since job start (4441s) is within the limit (172800.0s)
[2025-10-12 21:26:49] 2025-10-13 01:25:40,948 | INFO     | time since job start (4443s) is within the limit (172800.0s)
[2025-10-12 21:26:49] 2025-10-13 01:25:41,154 | INFO     | monitor loop #331: job 0:6840715192 is in state 'finished'
[2025-10-12 21:26:49] 2025-10-13 01:25:41,155 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:26:49] 2025-10-13 01:25:41,874 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 21:26:49] 2025-10-13 01:25:42,957 | INFO     | time since job start (4445s) is within the limit (172800.0s)
[2025-10-12 21:26:49] 2025-10-13 01:25:43,658 | INFO     | monitor loop #332: job 0:6840715192 is in state 'finished'
[2025-10-12 21:26:49] 2025-10-13 01:25:43,658 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:26:49] 2025-10-13 01:25:43,816 | INFO     | job 6840715192 has state=finished
[2025-10-12 21:26:49] 2025-10-13 01:25:43,817 | INFO     | preparing for final server update for job 6840715192 in state='finished'
[2025-10-12 21:26:49] 2025-10-13 01:25:43,817 | INFO     | this job has now completed (state=finished)
[2025-10-12 21:26:49] 2025-10-13 01:25:43,817 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 21:26:49] 2025-10-13 01:25:43,817 | INFO     | log transfer has been attempted: DONE
[2025-10-12 21:26:49] 2025-10-13 01:25:43,818 | INFO     | job 6840715192 has finished - writing final server update
[2025-10-12 21:26:49] 2025-10-13 01:25:43,818 | INFO     | total number of processed events: 400 (read)
[2025-10-12 21:26:49] 2025-10-13 01:25:43,819 | INFO     | executing command: lscpu
[2025-10-12 21:26:49] 2025-10-13 01:25:43,845 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 21:26:49] 2025-10-13 01:25:44,962 | INFO     | time since job start (4447s) is within the limit (172800.0s)
[2025-10-12 21:26:49] 2025-10-13 01:25:46,194 | INFO     | monitor loop #333: job 0:6840715192 is in state 'finished'
[2025-10-12 21:26:49] 2025-10-13 01:25:46,194 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:26:49] 2025-10-13 01:25:46,968 | INFO     | time since job start (4449s) is within the limit (172800.0s)
[2025-10-12 21:26:49] 2025-10-13 01:25:48,697 | INFO     | monitor loop #334: job 0:6840715192 is in state 'finished'
[2025-10-12 21:26:49] 2025-10-13 01:25:48,698 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:26:49] 2025-10-13 01:25:48,722 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 21:26:49] 2025-10-13 01:25:48,726 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.5
[2025-10-12 21:26:49] 2025-10-13 01:25:48,728 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840715192/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:26:49] 2025-10-13 01:25:48,729 | INFO     | extracted standard info from prmon json
[2025-10-12 21:26:49] 2025-10-13 01:25:48,729 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 21:26:49] 2025-10-13 01:25:48,729 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:26:49] 2025-10-13 01:25:48,730 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:26:49] 2025-10-13 01:25:48,730 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:26:49] 2025-10-13 01:25:48,731 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:26:49] 2025-10-13 01:25:48,731 | INFO     | sum of square deviations: 89127252.5
[2025-10-12 21:26:49] 2025-10-13 01:25:48,732 | INFO     | sum of deviations: -399844721.4999998
[2025-10-12 21:26:49] 2025-10-13 01:25:48,732 | INFO     | mean x: 1760316613.5
[2025-10-12 21:26:49] 2025-10-13 01:25:48,732 | INFO     | mean y: 2678159.3181818184
[2025-10-12 21:26:49] 2025-10-13 01:25:48,732 | INFO     | -- intersect: 7899850868.38077
[2025-10-12 21:26:49] 2025-10-13 01:25:48,732 | INFO     | intersect: 7899850868.38077
[2025-10-12 21:26:49] 2025-10-13 01:25:48,732 | INFO     | chi2: 0.01879255399266973
[2025-10-12 21:26:49] 2025-10-13 01:25:48,733 | INFO     | -- intersect: 7899850868.38077
[2025-10-12 21:26:49] 2025-10-13 01:25:48,733 | INFO     | current memory leak: -4.49 B/s (using 66 data points, chi2=0.02)
[2025-10-12 21:26:49] 2025-10-13 01:25:48,733 | INFO     | could have reported an average CPU frequency of 2047 MHz (6 samples)
[2025-10-12 21:26:49] 2025-10-13 01:25:48,733 | INFO     | ..............................
[2025-10-12 21:26:49] 2025-10-13 01:25:48,733 | INFO     | . Timing measurements:
[2025-10-12 21:26:49] 2025-10-13 01:25:48,733 | INFO     | . get job = 0 s
[2025-10-12 21:26:49] 2025-10-13 01:25:48,733 | INFO     | . initial setup = 2 s
[2025-10-12 21:26:49] 2025-10-13 01:25:48,734 | INFO     | . payload setup = 7 s
[2025-10-12 21:26:49] 2025-10-13 01:25:48,734 | INFO     | . stage-in = 0 s
[2025-10-12 21:26:49] 2025-10-13 01:25:48,734 | INFO     | . payload execution = 4412 s
[2025-10-12 21:26:49] 2025-10-13 01:25:48,734 | INFO     | . stage-out = 0 s
[2025-10-12 21:26:49] 2025-10-13 01:25:48,734 | INFO     | . log creation = 0 s
[2025-10-12 21:26:49] 2025-10-13 01:25:48,734 | INFO     | ..............................
[2025-10-12 21:26:49] 2025-10-13 01:25:48,817 | INFO     | 
[2025-10-12 21:26:49] 2025-10-13 01:25:48,817 | INFO     | job summary report
[2025-10-12 21:26:49] 2025-10-13 01:25:48,817 | INFO     | --------------------------------------------------
[2025-10-12 21:26:49] 2025-10-13 01:25:48,817 | INFO     | PanDA job id: 6840715192
[2025-10-12 21:26:49] 2025-10-13 01:25:48,817 | INFO     | task id: 46676269
[2025-10-12 21:26:49] 2025-10-13 01:25:48,818 | INFO     | errors: (none)
[2025-10-12 21:26:49] 2025-10-13 01:25:48,818 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:26:49] 2025-10-13 01:25:48,818 | INFO     | pilot state: finished 
[2025-10-12 21:26:49] 2025-10-13 01:25:48,818 | INFO     | transexitcode: 0
[2025-10-12 21:26:49] 2025-10-13 01:25:48,818 | INFO     | exeerrorcode: 0
[2025-10-12 21:26:49] 2025-10-13 01:25:48,818 | INFO     | exeerrordiag: 
[2025-10-12 21:26:49] 2025-10-13 01:25:48,818 | INFO     | exitcode: 0
[2025-10-12 21:26:49] 2025-10-13 01:25:48,818 | INFO     | exitmsg: OK
[2025-10-12 21:26:49] 2025-10-13 01:25:48,818 | INFO     | cpuconsumptiontime: 47511 s
[2025-10-12 21:26:49] 2025-10-13 01:25:48,819 | INFO     | nevents: 400
[2025-10-12 21:26:49] 2025-10-13 01:25:48,819 | INFO     | neventsw: 0
[2025-10-12 21:26:49] 2025-10-13 01:25:48,819 | INFO     | pid: 4935
[2025-10-12 21:26:49] 2025-10-13 01:25:48,819 | INFO     | pgrp: 4935
[2025-10-12 21:26:49] 2025-10-13 01:25:48,819 | INFO     | corecount: 12
[2025-10-12 21:26:49] 2025-10-13 01:25:48,819 | INFO     | event service: False
[2025-10-12 21:26:49] 2025-10-13 01:25:48,819 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4423: 2375222, 4425: 2384220, 4428: 2384276, 4435: 2384598}
[2025-10-12 21:26:49] 2025-10-13 01:25:48,819 | INFO     | --------------------------------------------------
[2025-10-12 21:26:49] 2025-10-13 01:25:48,819 | INFO     | 
[2025-10-12 21:26:49] 2025-10-13 01:25:48,820 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 21:26:49] 2025-10-13 01:25:48,921 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:26:49] 2025-10-13 01:25:48,921 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:26:49] 2025-10-13 01:25:48,921 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:26:49] 2025-10-13 01:25:48,921 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:26:49] 2025-10-13 01:25:48,921 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:26:49] 2025-10-13 01:25:48,921 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:26:49] 2025-10-13 01:25:48,922 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:26:49] 2025-10-13 01:25:48,922 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:26:49] 2025-10-13 01:25:48,922 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:26:49] 2025-10-13 01:25:48,922 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:26:49] 2025-10-13 01:25:48,922 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:26:49] 2025-10-13 01:25:48,922 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:26:49] 2025-10-13 01:25:48,923 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:26:49] 2025-10-13 01:25:48,923 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:26:49] 2025-10-13 01:25:48,923 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:26:49] 2025-10-13 01:25:48,923 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:26:49] 2025-10-13 01:25:48,923 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:26:49] 2025-10-13 01:25:48,923 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:26:49] 2025-10-13 01:25:48,924 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:26:49] 2025-10-13 01:25:48,924 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:26:49] 2025-10-13 01:25:48,924 | INFO     | job 6840715192 has completed (purged errors)
[2025-10-12 21:26:49] 2025-10-13 01:25:48,924 | INFO     | overall cleanup function is called
[2025-10-12 21:26:49] 2025-10-13 01:25:49,932 | INFO     | --- collectZombieJob: --- 10, [4935]
[2025-10-12 21:26:49] 2025-10-13 01:25:49,932 | INFO     | zombie collector waiting for pid 4935
[2025-10-12 21:26:49] 2025-10-13 01:25:49,932 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:26:49] 2025-10-13 01:25:49,932 | INFO     | collected zombie processes
[2025-10-12 21:26:49] 2025-10-13 01:25:49,933 | INFO     | will attempt to kill all subprocesses of pid=4935
[2025-10-12 21:26:49] 2025-10-13 01:25:50,021 | INFO     | process IDs to be killed: [4935] (in reverse order)
[2025-10-12 21:26:49] 2025-10-13 01:25:50,073 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:26:49] 2025-10-13 01:25:50,073 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:26:49] 2025-10-13 01:25:50,077 | INFO     | did not find any defunct processes belonging to 4935
[2025-10-12 21:26:49] 2025-10-13 01:25:50,080 | INFO     | did not find any defunct processes belonging to 4935
[2025-10-12 21:26:49] 2025-10-13 01:25:50,080 | INFO     | ready for new job
[2025-10-12 21:26:49] 2025-10-13 01:25:50,080 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:26:49] 2025-10-13 01:25:50,081 | INFO     | ***************************************
[2025-10-12 21:26:49] 2025-10-13 01:25:50,082 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:26:49] 2025-10-13 01:25:50,082 | INFO     | ***************************************
[2025-10-12 21:26:49] 2025-10-13 01:25:50,082 | INFO     | 
[2025-10-12 21:26:49] 2025-10-13 01:25:50,082 | INFO     | architecture information:
[2025-10-12 21:26:49] 2025-10-13 01:25:50,083 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:26:49] 2025-10-13 01:25:50,097 | INFO     | cat /etc/os-release:
[2025-10-12 21:26:49] NAME="CentOS Linux"
[2025-10-12 21:26:49] VERSION="7 (Core)"
[2025-10-12 21:26:49] ID="centos"
[2025-10-12 21:26:49] ID_LIKE="rhel fedora"
[2025-10-12 21:26:49] VERSION_ID="7"
[2025-10-12 21:26:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:26:49] ANSI_COLOR="0;31"
[2025-10-12 21:26:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:26:49] HOME_URL="https://www.centos.org/"
[2025-10-12 21:26:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:26:49] 
[2025-10-12 21:26:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:26:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:26:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:26:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:26:49] 
[2025-10-12 21:26:49] 2025-10-13 01:25:50,097 | INFO     | ***************************************
[2025-10-12 21:26:49] 2025-10-13 01:25:50,600 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 21:26:49] 2025-10-13 01:25:50,618 | INFO     | sufficient remaining disk space (29358030848 B)
[2025-10-12 21:26:49] 2025-10-13 01:25:50,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:26:49] 2025-10-13 01:25:50,618 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:26:49] 2025-10-13 01:25:50,618 | INFO     | update_server=False
[2025-10-12 21:26:49] 2025-10-13 01:25:50,618 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:26:49] 2025-10-13 01:25:50,619 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:26:49] 2025-10-13 01:25:50,619 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:26:49] 2025-10-13 01:25:50,619 | INFO     | aborting loop
[2025-10-12 21:26:49] 2025-10-13 01:25:50,975 | INFO     | all data control threads have been joined
[2025-10-12 21:26:49] 2025-10-13 01:25:50,998 | INFO     | all job control threads have been joined
[2025-10-12 21:26:49] 2025-10-13 01:25:51,624 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:26:49] 2025-10-13 01:25:51,624 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:26:49] 2025-10-13 01:25:51,625 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:26:49] 2025-10-13 01:25:51,663 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:26:49] 2025-10-13 01:25:51,800 | INFO     | all payload control threads have been joined
[2025-10-12 21:26:49] 2025-10-13 01:25:51,859 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:26:49] 2025-10-13 01:25:51,867 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:26:49] 2025-10-13 01:25:51,981 | INFO     | [data] control thread has finished
[2025-10-12 21:26:49] 2025-10-13 01:25:52,003 | INFO     | [job] control thread has finished
[2025-10-12 21:26:49] 2025-10-13 01:25:52,270 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:26:49] 2025-10-13 01:25:52,274 | INFO     | [job] validate thread has finished
[2025-10-12 21:26:49] 2025-10-13 01:25:52,353 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:26:49] 2025-10-13 01:25:52,465 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:26:49] 2025-10-13 01:25:52,647 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:26:49] 2025-10-13 01:25:52,785 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:26:49] 2025-10-13 01:25:52,805 | INFO     | [payload] control thread has finished
[2025-10-12 21:26:49] 2025-10-13 01:25:53,865 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:26:49] 2025-10-13 01:25:56,470 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:26:49] 2025-10-13 01:26:01,507 | INFO     | job.realtimelogging is not enabled
[2025-10-12 21:26:49] 2025-10-13 01:26:02,510 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:26:49] 2025-10-13 01:26:20,164 | INFO     | PID=30788 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 21:26:49] 2025-10-13 01:26:20,164 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:26:49] 2025-10-13 01:26:20,164 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:26:49] 2025-10-13 01:26:20,164 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:26:49] 2025-10-13 01:26:34,664 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-12 21:26:49] 2025-10-13 01:26:44,060 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:26:49] 2025-10-13 01:26:44,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139840434800448)>', '<ExcThread(monitor, started 139839731115776)>']
[2025-10-12 21:26:49] 2025-10-13 01:26:45,274 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:26:49] 2025-10-13 01:26:45,274 | INFO     | [monitor] control thread has ended
[2025-10-12 21:26:49] 2025-10-13 01:26:49,601 | INFO     | all workflow threads have been joined
[2025-10-12 21:26:49] 2025-10-13 01:26:49,601 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:26:49] 2025-10-13 01:26:49,601 | INFO     | traces error code: 0
[2025-10-12 21:26:49] 2025-10-13 01:26:49,602 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:26:49] 2025-10-13 01:26:49,690 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:26:49] 2025-10-13 01:26:49,694 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:26:49] 2025-10-13 01:26:49,698 [wrapper] pilotpid: 30788
[2025-10-12 21:26:49] 2025-10-13 01:26:49,702 [wrapper] Pilot exit status: 0
[2025-10-12 21:26:49] 2025-10-13 01:26:49,719 [wrapper] pandaids: 6840715192
[2025-10-12 21:26:49] 2025-10-13 01:26:49,765 [wrapper] cleanup supervisor_pilot 21349 30789
[2025-10-12 21:26:49] 2025-10-13 01:26:49,770 [wrapper] Test setup, not cleaning
[2025-10-12 21:26:49] 2025-10-13 01:26:49,774 [wrapper] apfmon messages muted
[2025-10-12 21:26:49] 2025-10-13 01:26:49,778 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:26:49] 2025-10-13 01:26:49,782 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:26:49]  *** Error codes and diagnostics ***
[2025-10-12 21:26:49]     "exeErrorCode": 0,
[2025-10-12 21:26:49]     "exeErrorDiag": "",
[2025-10-12 21:26:49]     "pilotErrorCode": 0,
[2025-10-12 21:26:49]     "pilotErrorDiag": "",
[2025-10-12 21:26:49]  *** Listing of results directory ***
[2025-10-12 21:26:49] total 414656
[2025-10-12 21:26:49] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 15:50 pilot3.tar.gz
[2025-10-12 21:26:49] -rwx------ 1 boincer umatlas     36292 Oct 12 15:59 runpilot2-wrapper.sh
[2025-10-12 21:26:49] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 15:59 queuedata.json
[2025-10-12 21:26:49] -rw-r--r-- 1 boincer umatlas       100 Oct 12 20:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:26:49] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 20:11 run_atlas
[2025-10-12 21:26:49] -rw-r--r-- 1 boincer umatlas       105 Oct 12 20:11 job.xml
[2025-10-12 21:26:49] -rw-r--r-- 2 boincer umatlas 220025496 Oct 12 20:11 EVNT.46676267._004480.pool.root.1
[2025-10-12 21:26:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:11 start_atlas.sh
[2025-10-12 21:26:49] drwxrwx--x 2 boincer umatlas      4096 Oct 12 20:11 shared
[2025-10-12 21:26:49] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 20:11 input.tar.gz
[2025-10-12 21:26:49] -rw-r--r-- 1 boincer umatlas         0 Oct 12 20:11 boinc_lockfile
[2025-10-12 21:26:49] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 20:11 pandaJob.out
[2025-10-12 21:26:49] -rw------- 1 boincer umatlas    975603 Oct 12 20:11 agis_schedconf.cvmfs.json
[2025-10-12 21:26:49] -rw------- 1 boincer umatlas   1560580 Oct 12 20:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:26:49] drwx------ 5 boincer umatlas      4096 Oct 12 20:11 pilot3
[2025-10-12 21:26:49] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 21:18 init_data.xml
[2025-10-12 21:26:49] -rw------- 1 boincer umatlas 198623380 Oct 12 21:25 HITS.46676269._088144.pool.root.1
[2025-10-12 21:26:49] -rw-r--r-- 1 boincer umatlas       529 Oct 12 21:25 boinc_task_state.xml
[2025-10-12 21:26:49] -rw------- 1 boincer umatlas      1050 Oct 12 21:25 memory_monitor_summary.json
[2025-10-12 21:26:49] -rw------- 1 boincer umatlas        95 Oct 12 21:25 pilot_heartbeat.json
[2025-10-12 21:26:49] -rw------- 1 boincer umatlas    382517 Oct 12 21:25 log.46676269._088144.job.log.tgz.1
[2025-10-12 21:26:49] -rw------- 1 boincer umatlas      7848 Oct 12 21:25 heartbeat.json
[2025-10-12 21:26:49] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 21:26 boinc_mmap_file
[2025-10-12 21:26:49] -rw-r--r-- 1 boincer umatlas        27 Oct 12 21:26 wrapper_checkpoint.txt
[2025-10-12 21:26:49] -rw------- 1 boincer umatlas      4818 Oct 12 21:26 pilotlog.txt
[2025-10-12 21:26:49] -rw------- 1 boincer umatlas    645585 Oct 12 21:26 log.46676269._088144.job.log.1
[2025-10-12 21:26:49] -rw------- 1 boincer umatlas       357 Oct 12 21:26 output.list
[2025-10-12 21:26:49] -rw-r--r-- 1 boincer umatlas       620 Oct 12 21:26 runtime_log
[2025-10-12 21:26:49] -rw------- 1 boincer umatlas   1044480 Oct 12 21:26 result.tar.gz
[2025-10-12 21:26:49] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 21:26 runtime_log.err
[2025-10-12 21:26:49] -rw------- 1 boincer umatlas       658 Oct 12 21:26 k71NDm0OHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm3tUMDmPXnDyn.diag
[2025-10-12 21:26:49] -rw-r--r-- 1 boincer umatlas     22193 Oct 12 21:26 stderr.txt
[2025-10-12 21:26:49] HITS file was successfully produced:
[2025-10-12 21:26:49] -rw------- 1 boincer umatlas 198623380 Oct 12 21:25 shared/HITS.pool.root.1
[2025-10-12 21:26:49]  *** Contents of shared directory: ***
[2025-10-12 21:26:49] total 410444
[2025-10-12 21:26:49] -rw-r--r-- 2 boincer umatlas 220025496 Oct 12 20:11 ATLAS.root_0
[2025-10-12 21:26:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:11 start_atlas.sh
[2025-10-12 21:26:49] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 20:11 input.tar.gz
[2025-10-12 21:26:49] -rw------- 1 boincer umatlas 198623380 Oct 12 21:25 HITS.pool.root.1
[2025-10-12 21:26:49] -rw------- 1 boincer umatlas   1044480 Oct 12 21:26 result.tar.gz
21:26:51 (27119): run_atlas exited; CPU time 47491.529521
21:26:51 (27119): called boinc_finish(0)

</stderr_txt>
]]>

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