Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:09:14 (1103291): wrapper (7.7.26015): starting
20:09:14 (1103291): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:09:14] Arguments: --nthreads 8
[2025-10-12 20:09:14] Threads: 8
[2025-10-12 20:09:14] Checking for CVMFS
[2025-10-12 20:09:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:09:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:09:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:09:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:09:14] 2.10.1.0 4440 187772 165476 151641 2 188 16920344 18432000 3656 130560 2 226720961 99.991 7161526 5576 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-12 20:09:14] CVMFS is ok
[2025-10-12 20:09:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:09:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:09:14] Further information can be found at the LHC@home message board.
[2025-10-12 20:09:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:09:14] Checking for apptainer binary...
[2025-10-12 20:09:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:09:14] Running /usr/bin/apptainer --version
[2025-10-12 20:09:14] apptainer version 1.1.9-1.el8
[2025-10-12 20:09:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:09:15] c-16-31.aglt2.org
[2025-10-12 20:09:15] apptainer works
[2025-10-12 20:09:15] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:09:15] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:09:15] Starting ATLAS job with PandaID=6840536908
[2025-10-12 20:09:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:59:50]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:59:50] 2025-10-13 02:58:57,669 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:59:50] 2025-10-13 02:58:57,669 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:59:50] 2025-10-13 02:58:57,674 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:59:50] 2025-10-13 02:58:57,675 | INFO     | sum of square deviations: 1444149868.0
[2025-10-12 22:59:50] 2025-10-13 02:58:57,676 | INFO     | sum of deviations: 16417784305.0
[2025-10-12 22:59:50] 2025-10-13 02:58:57,676 | INFO     | mean x: 1760319254.0
[2025-10-12 22:59:50] 2025-10-13 02:58:57,676 | INFO     | mean y: 2472297.251497006
[2025-10-12 22:59:50] 2025-10-13 02:58:57,677 | INFO     | -- intersect: -20009676345.004593
[2025-10-12 22:59:50] 2025-10-13 02:58:57,677 | INFO     | intersect: -20009676345.004593
[2025-10-12 22:59:50] 2025-10-13 02:58:57,677 | INFO     | chi2: 2.2290298064392653
[2025-10-12 22:59:50] 2025-10-13 02:58:57,678 | INFO     | sum of square deviations: 1318277740.5
[2025-10-12 22:59:50] 2025-10-13 02:58:57,679 | INFO     | sum of deviations: 26755151806.0
[2025-10-12 22:59:50] 2025-10-13 02:58:57,679 | INFO     | mean x: 1760319101.5
[2025-10-12 22:59:50] 2025-10-13 02:58:57,679 | INFO     | mean y: 2484492.901234568
[2025-10-12 22:59:50] 2025-10-13 02:58:57,679 | INFO     | -- intersect: -35724133154.280396
[2025-10-12 22:59:50] 2025-10-13 02:58:57,680 | INFO     | intersect: -35724133154.280396
[2025-10-12 22:59:50] 2025-10-13 02:58:57,680 | INFO     | chi2: 1.4476898334515222
[2025-10-12 22:59:50] 2025-10-13 02:58:57,680 | INFO     | current chi2=1.4476898334515222 (change=35.05291722571823 %)
[2025-10-12 22:59:50] 2025-10-13 02:58:57,681 | INFO     | sum of square deviations: 1199940638.0
[2025-10-12 22:59:50] 2025-10-13 02:58:57,682 | INFO     | sum of deviations: 25679340434.000004
[2025-10-12 22:59:50] 2025-10-13 02:58:57,682 | INFO     | mean x: 1760318949.0
[2025-10-12 22:59:50] 2025-10-13 02:58:57,682 | INFO     | mean y: 2483105.305732484
[2025-10-12 22:59:50] 2025-10-13 02:58:57,682 | INFO     | -- intersect: -37669238421.79875
[2025-10-12 22:59:50] 2025-10-13 02:58:57,682 | INFO     | intersect: -37669238421.79875
[2025-10-12 22:59:50] 2025-10-13 02:58:57,683 | INFO     | chi2: 1.4488994552518086
[2025-10-12 22:59:50] 2025-10-13 02:58:57,683 | INFO     | current chi2=1.4488994552518086 (change=-0.0835553149808655 %)
[2025-10-12 22:59:50] 2025-10-13 02:58:57,683 | INFO     | right removable region: 156
[2025-10-12 22:59:50] 2025-10-13 02:58:57,684 | INFO     | sum of square deviations: 1318277740.5
[2025-10-12 22:59:50] 2025-10-13 02:58:57,685 | INFO     | sum of deviations: -8872049138.5
[2025-10-12 22:59:50] 2025-10-13 02:58:57,685 | INFO     | mean x: 1760319406.5
[2025-10-12 22:59:50] 2025-10-13 02:58:57,685 | INFO     | mean y: 2502525.0185185187
[2025-10-12 22:59:50] 2025-10-13 02:58:57,685 | INFO     | -- intersect: 11849505469.936373
[2025-10-12 22:59:50] 2025-10-13 02:58:57,686 | INFO     | intersect: 11849505469.936373
[2025-10-12 22:59:50] 2025-10-13 02:58:57,686 | INFO     | chi2: 0.81658283239229
[2025-10-12 22:59:50] 2025-10-13 02:58:57,686 | INFO     | current chi2=0.81658283239229 (change=63.36599761773801 %)
[2025-10-12 22:59:50] 2025-10-13 02:58:57,687 | INFO     | sum of square deviations: 1199940638.0
[2025-10-12 22:59:50] 2025-10-13 02:58:57,688 | INFO     | sum of deviations: -6529479345.000002
[2025-10-12 22:59:50] 2025-10-13 02:58:57,688 | INFO     | mean x: 1760319559.0
[2025-10-12 22:59:50] 2025-10-13 02:58:57,688 | INFO     | mean y: 2499498.993630573
[2025-10-12 22:59:50] 2025-10-13 02:58:57,688 | INFO     | -- intersect: 9581281846.300058
[2025-10-12 22:59:50] 2025-10-13 02:58:57,688 | INFO     | intersect: 9581281846.300058
[2025-10-12 22:59:50] 2025-10-13 02:58:57,689 | INFO     | chi2: 0.809811840788156
[2025-10-12 22:59:50] 2025-10-13 02:58:57,689 | INFO     | current chi2=0.809811840788156 (change=0.8291861322013631 %)
[2025-10-12 22:59:50] 2025-10-13 02:58:57,689 | INFO     | left removable region: 20
[2025-10-12 22:59:50] 2025-10-13 02:58:57,690 | INFO     | sum of square deviations: 779958810.0
[2025-10-12 22:59:50] 2025-10-13 02:58:57,690 | INFO     | sum of deviations: 2653280338.9999995
[2025-10-12 22:59:50] 2025-10-13 02:58:57,691 | INFO     | mean x: 1760319528.5
[2025-10-12 22:59:50] 2025-10-13 02:58:57,691 | INFO     | mean y: 2514117.7647058824
[2025-10-12 22:59:50] 2025-10-13 02:58:57,691 | INFO     | -- intersect: -5985778001.5675955
[2025-10-12 22:59:50] 2025-10-13 02:58:57,691 | INFO     | intersect: -5985778001.5675955
[2025-10-12 22:59:50] 2025-10-13 02:58:57,692 | INFO     | chi2: 0.00032041293017086585
[2025-10-12 22:59:50] 2025-10-13 02:58:57,692 | INFO     | -- intersect: -5985778001.5675955
[2025-10-12 22:59:50] 2025-10-13 02:58:57,692 | INFO     | current memory leak: 3.40 B/s (using 136 data points, chi2=0.00)
[2025-10-12 22:59:50] 2025-10-13 02:58:57,693 | INFO     | could have reported an average CPU frequency of 2967 MHz (9 samples)
[2025-10-12 22:59:50] 2025-10-13 02:58:57,693 | INFO     | ..............................
[2025-10-12 22:59:50] 2025-10-13 02:58:57,693 | INFO     | . Timing measurements:
[2025-10-12 22:59:50] 2025-10-13 02:58:57,693 | INFO     | . get job = 0 s
[2025-10-12 22:59:50] 2025-10-13 02:58:57,693 | INFO     | . initial setup = 2 s
[2025-10-12 22:59:50] 2025-10-13 02:58:57,693 | INFO     | . payload setup = 5 s
[2025-10-12 22:59:50] 2025-10-13 02:58:57,694 | INFO     | . stage-in = 0 s
[2025-10-12 22:59:50] 2025-10-13 02:58:57,694 | INFO     | . payload execution = 10135 s
[2025-10-12 22:59:50] 2025-10-13 02:58:57,694 | INFO     | . stage-out = 0 s
[2025-10-12 22:59:50] 2025-10-13 02:58:57,694 | INFO     | . log creation = 0 s
[2025-10-12 22:59:50] 2025-10-13 02:58:57,694 | INFO     | ..............................
[2025-10-12 22:59:50] 2025-10-13 02:58:58,010 | INFO     | 
[2025-10-12 22:59:50] 2025-10-13 02:58:58,010 | INFO     | job summary report
[2025-10-12 22:59:50] 2025-10-13 02:58:58,010 | INFO     | --------------------------------------------------
[2025-10-12 22:59:50] 2025-10-13 02:58:58,010 | INFO     | PanDA job id: 6840536908
[2025-10-12 22:59:50] 2025-10-13 02:58:58,010 | INFO     | task id: 46676269
[2025-10-12 22:59:50] 2025-10-13 02:58:58,011 | INFO     | errors: (none)
[2025-10-12 22:59:50] 2025-10-13 02:58:58,011 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:59:50] 2025-10-13 02:58:58,011 | INFO     | pilot state: finished 
[2025-10-12 22:59:50] 2025-10-13 02:58:58,011 | INFO     | transexitcode: 0
[2025-10-12 22:59:50] 2025-10-13 02:58:58,011 | INFO     | exeerrorcode: 0
[2025-10-12 22:59:50] 2025-10-13 02:58:58,011 | INFO     | exeerrordiag: 
[2025-10-12 22:59:50] 2025-10-13 02:58:58,012 | INFO     | exitcode: 0
[2025-10-12 22:59:50] 2025-10-13 02:58:58,012 | INFO     | exitmsg: OK
[2025-10-12 22:59:50] 2025-10-13 02:58:58,012 | INFO     | cpuconsumptiontime: 75825 s
[2025-10-12 22:59:50] 2025-10-13 02:58:58,012 | INFO     | nevents: 400
[2025-10-12 22:59:50] 2025-10-13 02:58:58,012 | INFO     | neventsw: 0
[2025-10-12 22:59:50] 2025-10-13 02:58:58,012 | INFO     | pid: 1127587
[2025-10-12 22:59:50] 2025-10-13 02:58:58,013 | INFO     | pgrp: 1127587
[2025-10-12 22:59:50] 2025-10-13 02:58:58,013 | INFO     | corecount: 8
[2025-10-12 22:59:50] 2025-10-13 02:58:58,013 | INFO     | event service: False
[2025-10-12 22:59:50] 2025-10-13 02:58:58,013 | INFO     | sizes: {0: 2348028, 1: 2348884, 5: 2349146, 12: 2349202, 10145: 2377730, 10146: 2386912, 10157: 2387114}
[2025-10-12 22:59:50] 2025-10-13 02:58:58,013 | INFO     | --------------------------------------------------
[2025-10-12 22:59:50] 2025-10-13 02:58:58,013 | INFO     | 
[2025-10-12 22:59:50] 2025-10-13 02:58:58,014 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 22:59:50] 2025-10-13 02:58:58,033 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:59:50] 2025-10-13 02:58:58,034 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:59:50] 2025-10-13 02:58:58,034 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:59:50] 2025-10-13 02:58:58,034 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:59:50] 2025-10-13 02:58:58,034 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:59:50] 2025-10-13 02:58:58,034 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:59:50] 2025-10-13 02:58:58,034 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:59:50] 2025-10-13 02:58:58,035 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:59:50] 2025-10-13 02:58:58,035 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:59:50] 2025-10-13 02:58:58,035 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:59:50] 2025-10-13 02:58:58,035 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:59:50] 2025-10-13 02:58:58,035 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:59:50] 2025-10-13 02:58:58,035 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:59:50] 2025-10-13 02:58:58,036 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:59:50] 2025-10-13 02:58:58,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:59:50] 2025-10-13 02:58:58,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:59:50] 2025-10-13 02:58:58,036 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:59:50] 2025-10-13 02:58:58,036 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:59:50] 2025-10-13 02:58:58,036 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:59:50] 2025-10-13 02:58:58,037 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:59:50] 2025-10-13 02:58:58,037 | INFO     | job 6840536908 has completed (purged errors)
[2025-10-12 22:59:50] 2025-10-13 02:58:58,037 | INFO     | overall cleanup function is called
[2025-10-12 22:59:50] 2025-10-13 02:58:59,046 | INFO     | --- collectZombieJob: --- 10, [1127587]
[2025-10-12 22:59:50] 2025-10-13 02:58:59,046 | INFO     | zombie collector waiting for pid 1127587
[2025-10-12 22:59:50] 2025-10-13 02:58:59,046 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:59:50] 2025-10-13 02:58:59,047 | INFO     | collected zombie processes
[2025-10-12 22:59:50] 2025-10-13 02:58:59,047 | INFO     | will attempt to kill all subprocesses of pid=1127587
[2025-10-12 22:59:50] 2025-10-13 02:58:59,355 | INFO     | process IDs to be killed: [1127587] (in reverse order)
[2025-10-12 22:59:50] 2025-10-13 02:58:59,448 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:59:50] 2025-10-13 02:58:59,449 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:59:50] 2025-10-13 02:58:59,467 | INFO     | did not find any defunct processes belonging to 1127587
[2025-10-12 22:59:50] 2025-10-13 02:58:59,482 | INFO     | did not find any defunct processes belonging to 1127587
[2025-10-12 22:59:50] 2025-10-13 02:58:59,483 | INFO     | ready for new job
[2025-10-12 22:59:50] 2025-10-13 02:58:59,483 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:59:50] 2025-10-13 02:58:59,485 | INFO     | ***************************************
[2025-10-12 22:59:50] 2025-10-13 02:58:59,485 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:59:50] 2025-10-13 02:58:59,486 | INFO     | ***************************************
[2025-10-12 22:59:50] 2025-10-13 02:58:59,486 | INFO     | 
[2025-10-12 22:59:50] 2025-10-13 02:58:59,501 | INFO     | architecture information:
[2025-10-12 22:59:50] 2025-10-13 02:58:59,501 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:59:50] 2025-10-13 02:58:59,512 | INFO     | cat /etc/os-release:
[2025-10-12 22:59:50] NAME="CentOS Linux"
[2025-10-12 22:59:50] VERSION="7 (Core)"
[2025-10-12 22:59:50] ID="centos"
[2025-10-12 22:59:50] ID_LIKE="rhel fedora"
[2025-10-12 22:59:50] VERSION_ID="7"
[2025-10-12 22:59:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:59:50] ANSI_COLOR="0;31"
[2025-10-12 22:59:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:59:50] HOME_URL="https://www.centos.org/"
[2025-10-12 22:59:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:59:50] 
[2025-10-12 22:59:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:59:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:59:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:59:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:59:50] 
[2025-10-12 22:59:50] 2025-10-13 02:58:59,513 | INFO     | ***************************************
[2025-10-12 22:59:50] 2025-10-13 02:59:00,016 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 22:59:50] 2025-10-13 02:59:00,031 | INFO     | sufficient remaining disk space (103611891712 B)
[2025-10-12 22:59:50] 2025-10-13 02:59:00,031 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:59:50] 2025-10-13 02:59:00,032 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:59:50] 2025-10-13 02:59:00,032 | INFO     | update_server=False
[2025-10-12 22:59:50] 2025-10-13 02:59:00,032 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:59:50] 2025-10-13 02:59:00,187 | INFO     | all job control threads have been joined
[2025-10-12 22:59:50] 2025-10-13 02:59:00,277 | INFO     | all data control threads have been joined
[2025-10-12 22:59:50] 2025-10-13 02:59:00,429 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:59:50] 2025-10-13 02:59:00,429 | INFO     | aborting loop
[2025-10-12 22:59:50] 2025-10-13 02:59:00,478 | INFO     | all payload control threads have been joined
[2025-10-12 22:59:50] 2025-10-13 02:59:00,619 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:59:50] 2025-10-13 02:59:01,036 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:59:50] 2025-10-13 02:59:01,193 | INFO     | [job] control thread has finished
[2025-10-12 22:59:50] 2025-10-13 02:59:01,282 | INFO     | [data] control thread has finished
[2025-10-12 22:59:50] 2025-10-13 02:59:01,434 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:59:50] 2025-10-13 02:59:01,483 | INFO     | [payload] control thread has finished
[2025-10-12 22:59:50] 2025-10-13 02:59:01,526 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:59:50] 2025-10-13 02:59:01,884 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:59:50] 2025-10-13 02:59:01,940 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:59:50] 2025-10-13 02:59:01,989 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:59:50] 2025-10-13 02:59:02,157 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:59:50] 2025-10-13 02:59:02,392 | INFO     | [job] validate thread has finished
[2025-10-12 22:59:50] 2025-10-13 02:59:02,394 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:59:50] 2025-10-13 02:59:02,624 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:59:50] 2025-10-13 02:59:02,734 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:59:50] 2025-10-13 02:59:02,862 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:59:50] 2025-10-13 02:59:03,867 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:59:50] 2025-10-13 02:59:06,739 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:59:50] 2025-10-13 02:59:11,083 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:59:50] 2025-10-13 02:59:12,088 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:59:50] 2025-10-13 02:59:30,117 | INFO     | PID=1110569 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:59:50] 2025-10-13 02:59:30,117 | INFO     | .. there are 5 such processes running
[2025-10-12 22:59:50] 2025-10-13 02:59:30,119 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:59:50] 2025-10-13 02:59:30,119 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:59:50] 2025-10-13 02:59:30,119 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:59:50] 2025-10-13 02:59:43,073 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:59:50] 2025-10-13 02:59:44,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140311747639104)>', '<ExcThread(monitor, started 140311296710400)>']
[2025-10-12 22:59:50] 2025-10-13 02:59:45,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:59:50] 2025-10-13 02:59:45,193 | INFO     | [monitor] control thread has ended
[2025-10-12 22:59:50] 2025-10-13 02:59:49,515 | INFO     | all workflow threads have been joined
[2025-10-12 22:59:50] 2025-10-13 02:59:49,515 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:59:50] 2025-10-13 02:59:49,515 | INFO     | traces error code: 0
[2025-10-12 22:59:50] 2025-10-13 02:59:49,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:59:50] 2025-10-13 02:59:49,619 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:59:50] 2025-10-13 02:59:49,621 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:59:50] 2025-10-13 02:59:49,624 [wrapper] pilotpid: 1110569
[2025-10-12 22:59:50] 2025-10-13 02:59:49,626 [wrapper] Pilot exit status: 0
[2025-10-12 22:59:50] 2025-10-13 02:59:49,634 [wrapper] pandaids: 6840536908
[2025-10-12 22:59:50] 2025-10-13 02:59:49,697 [wrapper] cleanup supervisor_pilot 3602794 1110570
[2025-10-12 22:59:50] 2025-10-13 02:59:49,700 [wrapper] Test setup, not cleaning
[2025-10-12 22:59:50] 2025-10-13 02:59:49,703 [wrapper] apfmon messages muted
[2025-10-12 22:59:50] 2025-10-13 02:59:49,706 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:59:50] 2025-10-13 02:59:49,708 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:59:50]  *** Error codes and diagnostics ***
[2025-10-12 22:59:50]     "exeErrorCode": 0,
[2025-10-12 22:59:50]     "exeErrorDiag": "",
[2025-10-12 22:59:50]     "pilotErrorCode": 0,
[2025-10-12 22:59:50]     "pilotErrorDiag": "",
[2025-10-12 22:59:50]  *** Listing of results directory ***
[2025-10-12 22:59:50] total 415408
[2025-10-12 22:59:50] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 14:20 pilot3.tar.gz
[2025-10-12 22:59:50] -rwx------ 1 boincer umatlas     36292 Oct 12 14:37 runpilot2-wrapper.sh
[2025-10-12 22:59:50] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 14:37 queuedata.json
[2025-10-12 22:59:50] -rw-r--r-- 1 boincer umatlas       100 Oct 12 20:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:59:50] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 20:09 run_atlas
[2025-10-12 22:59:50] -rw-r--r-- 1 boincer umatlas       105 Oct 12 20:09 job.xml
[2025-10-12 22:59:50] -rw-r--r-- 2 boincer umatlas 218486912 Oct 12 20:09 EVNT.46676267._004412.pool.root.1
[2025-10-12 22:59:50] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:09 start_atlas.sh
[2025-10-12 22:59:50] drwxrwx--x 2 boincer umatlas      4096 Oct 12 20:09 shared
[2025-10-12 22:59:50] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 20:09 input.tar.gz
[2025-10-12 22:59:50] -rw-r--r-- 1 boincer umatlas         0 Oct 12 20:09 boinc_lockfile
[2025-10-12 22:59:50] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 20:09 pandaJob.out
[2025-10-12 22:59:50] -rw------- 1 boincer umatlas    975603 Oct 12 20:09 agis_schedconf.cvmfs.json
[2025-10-12 22:59:50] -rw------- 1 boincer umatlas   1560580 Oct 12 20:09 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:59:50] drwx------ 5 boincer umatlas      4096 Oct 12 20:09 pilot3
[2025-10-12 22:59:50] -rw-r--r-- 1 boincer umatlas      6014 Oct 12 22:56 init_data.xml
[2025-10-12 22:59:50] -rw------- 1 boincer umatlas 199261151 Oct 12 22:58 HITS.46676269._086327.pool.root.1
[2025-10-12 22:59:50] -rw-r--r-- 1 boincer umatlas       531 Oct 12 22:58 boinc_task_state.xml
[2025-10-12 22:59:50] -rw------- 1 boincer umatlas      1048 Oct 12 22:58 memory_monitor_summary.json
[2025-10-12 22:59:50] -rw------- 1 boincer umatlas    425232 Oct 12 22:58 log.46676269._086327.job.log.tgz.1
[2025-10-12 22:59:50] -rw------- 1 boincer umatlas      7833 Oct 12 22:58 heartbeat.json
[2025-10-12 22:59:50] -rw------- 1 boincer umatlas        95 Oct 12 22:59 pilot_heartbeat.json
[2025-10-12 22:59:50] -rw------- 1 boincer umatlas      4896 Oct 12 22:59 pilotlog.txt
[2025-10-12 22:59:50] -rw------- 1 boincer umatlas   1435504 Oct 12 22:59 log.46676269._086327.job.log.1
[2025-10-12 22:59:50] -rw------- 1 boincer umatlas       357 Oct 12 22:59 output.list
[2025-10-12 22:59:50] -rw-r--r-- 1 boincer umatlas       620 Oct 12 22:59 runtime_log
[2025-10-12 22:59:50] -rw------- 1 boincer umatlas   1884160 Oct 12 22:59 result.tar.gz
[2025-10-12 22:59:50] -rw-r--r-- 1 boincer umatlas      8699 Oct 12 22:59 runtime_log.err
[2025-10-12 22:59:50] -rw------- 1 boincer umatlas       658 Oct 12 22:59 4DyMDm67FS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmH6kNDmmIj3Go.diag
[2025-10-12 22:59:50] -rw-r--r-- 1 boincer umatlas        28 Oct 12 22:59 wrapper_checkpoint.txt
[2025-10-12 22:59:50] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 22:59 boinc_mmap_file
[2025-10-12 22:59:50] -rw-r--r-- 1 boincer umatlas     20879 Oct 12 22:59 stderr.txt
[2025-10-12 22:59:50] HITS file was successfully produced:
[2025-10-12 22:59:50] -rw------- 1 boincer umatlas 199261151 Oct 12 22:58 shared/HITS.pool.root.1
[2025-10-12 22:59:50]  *** Contents of shared directory: ***
[2025-10-12 22:59:50] total 410384
[2025-10-12 22:59:50] -rw-r--r-- 2 boincer umatlas 218486912 Oct 12 20:09 ATLAS.root_0
[2025-10-12 22:59:50] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:09 start_atlas.sh
[2025-10-12 22:59:50] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 20:09 input.tar.gz
[2025-10-12 22:59:50] -rw------- 1 boincer umatlas 199261151 Oct 12 22:58 HITS.pool.root.1
[2025-10-12 22:59:50] -rw------- 1 boincer umatlas   1884160 Oct 12 22:59 result.tar.gz
22:59:51 (1103291): run_atlas exited; CPU time 76150.718570
22:59:51 (1103291): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN