Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:13:25 (2749838): wrapper (7.7.26015): starting
16:13:25 (2749838): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 16:13:25] Arguments: --nthreads 6
[2025-10-13 16:13:25] Threads: 6
[2025-10-13 16:13:25] Checking for CVMFS
[2025-10-13 16:13:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 16:13:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 16:13:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 16:13:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 16:13:26] 2.11.5.0 3385007 5534 101112 151652 0 187 13645044 20971521 865 130560 0 11034413 99.996 187042 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-10-13 16:13:26] CVMFS is ok
[2025-10-13 16:13:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 16:13:26] Checking for apptainer binary...
[2025-10-13 16:13:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 16:13:26] Running /usr/bin/apptainer --version
[2025-10-13 16:13:26] apptainer version 1.3.6-1.el9
[2025-10-13 16:13:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 16:13:26] testio006
[2025-10-13 16:13:26] apptainer works
[2025-10-13 16:13:26] Set ATHENA_PROC_NUMBER=6
[2025-10-13 16:13:26] Set ATHENA_CORE_NUMBER=6
[2025-10-13 16:13:26] Starting ATLAS job with PandaID=6840748828
[2025-10-13 16:13:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 17:30:46]  *** The last 200 lines of the pilot log: ***
[2025-10-13 17:30:46]  mtime=0
[2025-10-13 17:30:46]  protocol_id=None
[2025-10-13 17:30:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 17:30:46]  replicas=None
[2025-10-13 17:30:46]  scope=mc23_13p6TeV
[2025-10-13 17:30:46]  status=None
[2025-10-13 17:30:46]  status_code=0
[2025-10-13 17:30:46]  storage_token=
[2025-10-13 17:30:46]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6840748828/log.46676269._088394.job.log.tgz.1
[2025-10-13 17:30:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/5b/log.46676269._088394.job.log.tgz.1
[2025-10-13 17:30:46]  workdir=None
[2025-10-13 17:30:46] ]
[2025-10-13 17:30:46] 2025-10-13 08:29:55,884 | INFO     | transferring file log.46676269._088394.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6840748828/log.46676269._088394.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 17:30:46] 2025-10-13 08:29:55,884 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6840748828/log.46676269._088394.job.log.tgz.1 /var/lib/boinc/slots/1/log.46676269._088394.job
[2025-10-13 17:30:46] 2025-10-13 08:29:55,894 | INFO     | adding to output.list: log.46676269._088394.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/5b/log.46676269._088394.job.log.tg
[2025-10-13 17:30:46] 2025-10-13 08:29:55,894 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 17:30:46] 2025-10-13 08:29:55,894 | INFO     | summary of transferred files:
[2025-10-13 17:30:46] 2025-10-13 08:29:55,894 | INFO     |  -- lfn=log.46676269._088394.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 17:30:46] 2025-10-13 08:29:55,894 | INFO     | stage-out finished correctly
[2025-10-13 17:30:46] 2025-10-13 08:29:56,275 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 17:30:46] 2025-10-13 08:29:57,084 | INFO     | time since job start (4583s) is within the limit (172800.0s)
[2025-10-13 17:30:46] 2025-10-13 08:29:57,587 | INFO     | monitor loop #351: job 0:6840748828 is in state 'finished'
[2025-10-13 17:30:46] 2025-10-13 08:29:57,587 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 17:30:46] 2025-10-13 08:29:58,876 | INFO     | job 6840748828 has state=finished
[2025-10-13 17:30:46] 2025-10-13 08:29:58,876 | INFO     | preparing for final server update for job 6840748828 in state='finished'
[2025-10-13 17:30:46] 2025-10-13 08:29:58,877 | INFO     | this job has now completed (state=finished)
[2025-10-13 17:30:46] 2025-10-13 08:29:58,877 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 17:30:46] 2025-10-13 08:29:58,877 | INFO     | log transfer has been attempted: DONE
[2025-10-13 17:30:46] 2025-10-13 08:29:58,877 | INFO     | job 6840748828 has finished - writing final server update
[2025-10-13 17:30:46] 2025-10-13 08:29:58,877 | INFO     | total number of processed events: 400 (read)
[2025-10-13 17:30:46] 2025-10-13 08:29:58,877 | INFO     | executing command: lscpu
[2025-10-13 17:30:46] 2025-10-13 08:29:58,891 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 17:30:46] 2025-10-13 08:29:59,089 | INFO     | time since job start (4585s) is within the limit (172800.0s)
[2025-10-13 17:30:46] 2025-10-13 08:30:00,090 | INFO     | monitor loop #352: job 0:6840748828 is in state 'finished'
[2025-10-13 17:30:46] 2025-10-13 08:30:00,090 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 17:30:46] 2025-10-13 08:30:01,094 | INFO     | time since job start (4587s) is within the limit (172800.0s)
[2025-10-13 17:30:46] 2025-10-13 08:30:01,137 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 17:30:46] 2025-10-13 08:30:01,139 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4097.7680625
[2025-10-13 17:30:46] 2025-10-13 08:30:01,140 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6840748828/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 17:30:46] 2025-10-13 08:30:01,141 | INFO     | extracted standard info from prmon json
[2025-10-13 17:30:46] 2025-10-13 08:30:01,141 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 17:30:46] 2025-10-13 08:30:01,141 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 17:30:46] 2025-10-13 08:30:01,141 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 17:30:46] 2025-10-13 08:30:01,141 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 17:30:46] 2025-10-13 08:30:01,142 | INFO     | fitting pss+swap vs Time
[2025-10-13 17:30:46] 2025-10-13 08:30:01,142 | INFO     | sum of square deviations: 97479037.0
[2025-10-13 17:30:46] 2025-10-13 08:30:01,142 | INFO     | sum of deviations: -5586514230.5
[2025-10-13 17:30:46] 2025-10-13 08:30:01,142 | INFO     | mean x: 1760341982.5
[2025-10-13 17:30:46] 2025-10-13 08:30:01,142 | INFO     | mean y: 2734964.4852941176
[2025-10-13 17:30:46] 2025-10-13 08:30:01,142 | INFO     | -- intersect: 100887764591.75615
[2025-10-13 17:30:46] 2025-10-13 08:30:01,142 | INFO     | intersect: 100887764591.75615
[2025-10-13 17:30:46] 2025-10-13 08:30:01,142 | INFO     | chi2: 0.13316891828398555
[2025-10-13 17:30:46] 2025-10-13 08:30:01,142 | INFO     | -- intersect: 100887764591.75615
[2025-10-13 17:30:46] 2025-10-13 08:30:01,142 | INFO     | current memory leak: -57.31 B/s (using 68 data points, chi2=0.13)
[2025-10-13 17:30:46] 2025-10-13 08:30:01,143 | INFO     | could have reported an average CPU frequency of 4045 MHz (6 samples)
[2025-10-13 17:30:46] 2025-10-13 08:30:01,143 | INFO     | ..............................
[2025-10-13 17:30:46] 2025-10-13 08:30:01,143 | INFO     | . Timing measurements:
[2025-10-13 17:30:46] 2025-10-13 08:30:01,143 | INFO     | . get job = 0 s
[2025-10-13 17:30:46] 2025-10-13 08:30:01,143 | INFO     | . initial setup = 4 s
[2025-10-13 17:30:46] 2025-10-13 08:30:01,143 | INFO     | . payload setup = 2 s
[2025-10-13 17:30:46] 2025-10-13 08:30:01,143 | INFO     | . stage-in = 0 s
[2025-10-13 17:30:46] 2025-10-13 08:30:01,143 | INFO     | . payload execution = 4560 s
[2025-10-13 17:30:46] 2025-10-13 08:30:01,143 | INFO     | . stage-out = 0 s
[2025-10-13 17:30:46] 2025-10-13 08:30:01,143 | INFO     | . log creation = 0 s
[2025-10-13 17:30:46] 2025-10-13 08:30:01,143 | INFO     | ..............................
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | 
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | job summary report
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | --------------------------------------------------
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | PanDA job id: 6840748828
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | task id: 46676269
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | errors: (none)
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | pilot state: finished 
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | transexitcode: 0
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | exeerrorcode: 0
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | exeerrordiag: 
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | exitcode: 0
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | exitmsg: OK
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | cpuconsumptiontime: 25043 s
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | nevents: 400
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | neventsw: 0
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | pid: 2760339
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | pgrp: 2760339
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | corecount: 6
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | event service: False
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | sizes: {0: 2348807, 2: 2349069, 11: 2349097, 4567: 2375178, 4568: 2384232, 4573: 2384370}
[2025-10-13 17:30:46] 2025-10-13 08:30:01,192 | INFO     | --------------------------------------------------
[2025-10-13 17:30:46] 2025-10-13 08:30:01,193 | INFO     | 
[2025-10-13 17:30:46] 2025-10-13 08:30:01,193 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-13 17:30:46] 2025-10-13 08:30:01,203 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 17:30:46] 2025-10-13 08:30:01,203 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 17:30:46] 2025-10-13 08:30:01,203 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 17:30:46] 2025-10-13 08:30:01,203 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 17:30:46] 2025-10-13 08:30:01,203 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 17:30:46] 2025-10-13 08:30:01,203 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 17:30:46] 2025-10-13 08:30:01,203 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 17:30:46] 2025-10-13 08:30:01,203 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 17:30:46] 2025-10-13 08:30:01,203 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 17:30:46] 2025-10-13 08:30:01,203 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 17:30:46] 2025-10-13 08:30:01,203 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 17:30:46] 2025-10-13 08:30:01,203 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 17:30:46] 2025-10-13 08:30:01,203 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 17:30:46] 2025-10-13 08:30:01,203 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 17:30:46] 2025-10-13 08:30:01,204 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 17:30:46] 2025-10-13 08:30:01,204 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 17:30:46] 2025-10-13 08:30:01,204 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 17:30:46] 2025-10-13 08:30:01,204 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 17:30:46] 2025-10-13 08:30:01,204 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 17:30:46] 2025-10-13 08:30:01,204 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 17:30:46] 2025-10-13 08:30:01,204 | INFO     | job 6840748828 has completed (purged errors)
[2025-10-13 17:30:46] 2025-10-13 08:30:01,204 | INFO     | overall cleanup function is called
[2025-10-13 17:30:46] 2025-10-13 08:30:02,211 | INFO     | --- collectZombieJob: --- 10, [2760339]
[2025-10-13 17:30:46] 2025-10-13 08:30:02,211 | INFO     | zombie collector waiting for pid 2760339
[2025-10-13 17:30:46] 2025-10-13 08:30:02,211 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 17:30:46] 2025-10-13 08:30:02,211 | INFO     | collected zombie processes
[2025-10-13 17:30:46] 2025-10-13 08:30:02,211 | INFO     | will attempt to kill all subprocesses of pid=2760339
[2025-10-13 17:30:46] 2025-10-13 08:30:02,270 | INFO     | process IDs to be killed: [2760339] (in reverse order)
[2025-10-13 17:30:46] 2025-10-13 08:30:02,298 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 17:30:46] 2025-10-13 08:30:02,298 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 17:30:46] 2025-10-13 08:30:02,300 | INFO     | did not find any defunct processes belonging to 2760339
[2025-10-13 17:30:46] 2025-10-13 08:30:02,302 | INFO     | did not find any defunct processes belonging to 2760339
[2025-10-13 17:30:46] 2025-10-13 08:30:02,302 | INFO     | ready for new job
[2025-10-13 17:30:46] 2025-10-13 08:30:02,302 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 17:30:46] 2025-10-13 08:30:02,303 | INFO     | ***************************************
[2025-10-13 17:30:46] 2025-10-13 08:30:02,303 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 17:30:46] 2025-10-13 08:30:02,303 | INFO     | ***************************************
[2025-10-13 17:30:46] 2025-10-13 08:30:02,303 | INFO     | 
[2025-10-13 17:30:46] 2025-10-13 08:30:02,304 | INFO     | architecture information:
[2025-10-13 17:30:46] 2025-10-13 08:30:02,304 | INFO     | executing command: cat /etc/os-release
[2025-10-13 17:30:46] 2025-10-13 08:30:02,311 | INFO     | cat /etc/os-release:
[2025-10-13 17:30:46] NAME="CentOS Linux"
[2025-10-13 17:30:46] VERSION="7 (Core)"
[2025-10-13 17:30:46] ID="centos"
[2025-10-13 17:30:46] ID_LIKE="rhel fedora"
[2025-10-13 17:30:46] VERSION_ID="7"
[2025-10-13 17:30:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 17:30:46] ANSI_COLOR="0;31"
[2025-10-13 17:30:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 17:30:46] HOME_URL="https://www.centos.org/"
[2025-10-13 17:30:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 17:30:46] 
[2025-10-13 17:30:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 17:30:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 17:30:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 17:30:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 17:30:46] 
[2025-10-13 17:30:46] 2025-10-13 08:30:02,311 | INFO     | ***************************************
[2025-10-13 17:30:46] 2025-10-13 08:30:02,814 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-13 17:30:46] 2025-10-13 08:30:02,823 | INFO     | sufficient remaining disk space (83197165568 B)
[2025-10-13 17:30:46] 2025-10-13 08:30:02,823 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 17:30:46] 2025-10-13 08:30:02,823 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 17:30:46] 2025-10-13 08:30:02,823 | INFO     | update_server=False
[2025-10-13 17:30:46] 2025-10-13 08:30:02,823 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 17:30:46] 2025-10-13 08:30:02,823 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 17:30:46] 2025-10-13 08:30:02,823 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 17:30:46] 2025-10-13 08:30:02,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:30:46] 2025-10-13 08:30:02,824 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 17:30:46] 2025-10-13 08:30:02,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 17:30:46] 2025-10-13 08:30:02,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 17:30:46] 2025-10-13 08:30:03,101 | INFO     | all payload control threads have been joined
[2025-10-13 17:30:46] 2025-10-13 08:30:03,342 | INFO     | all job control threads have been joined
[2025-10-13 17:30:46] 2025-10-13 08:30:03,581 | INFO     | all data control threads have been joined
[2025-10-13 17:30:46] 2025-10-13 08:30:03,599 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:30:46] 2025-10-13 08:30:03,599 | INFO     | aborting loop
[2025-10-13 17:30:46] 2025-10-13 08:30:03,829 | INFO     | [job] retrieve thread has finished
[2025-10-13 17:30:46] 2025-10-13 08:30:03,829 | INFO     | [job] queue monitor thread has finished
[2025-10-13 17:30:46] 2025-10-13 08:30:03,953 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 17:30:46] 2025-10-13 08:30:03,957 | INFO     | [data] copytool_in thread has finished
[2025-10-13 17:30:46] 2025-10-13 08:30:04,054 | INFO     | [payload] validate_post thread has finished
[2025-10-13 17:30:46] 2025-10-13 08:30:04,106 | INFO     | [payload] control thread has finished
[2025-10-13 17:30:46] 2025-10-13 08:30:04,347 | INFO     | [job] control thread has finished
[2025-10-13 17:30:46] 2025-10-13 08:30:04,386 | INFO     | [job] validate thread has finished
[2025-10-13 17:30:46] 2025-10-13 08:30:04,456 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 17:30:46] 2025-10-13 08:30:04,586 | INFO     | [data] control thread has finished
[2025-10-13 17:30:46] 2025-10-13 08:30:04,604 | INFO     | [job] job monitor thread has finished
[2025-10-13 17:30:46] 2025-10-13 08:30:04,604 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 17:30:46] 2025-10-13 08:30:04,664 | INFO     | [payload] failed_post thread has finished
[2025-10-13 17:30:46] 2025-10-13 08:30:05,009 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 17:30:46] 2025-10-13 08:30:05,959 | INFO     | [data] copytool_out thread has finished
[2025-10-13 17:30:46] 2025-10-13 08:30:06,829 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 17:30:46] 2025-10-13 08:30:13,381 | INFO     | job.realtimelogging is not enabled
[2025-10-13 17:30:46] 2025-10-13 08:30:14,387 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 17:30:46] 2025-10-13 08:30:40,777 | INFO     | [monitor] cgroup control has ended
[2025-10-13 17:30:46] 2025-10-13 08:30:41,108 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139954885580608)>', '<ExcThread(monitor, started 139954227230464)>']
[2025-10-13 17:30:46] 2025-10-13 08:30:42,027 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 17:30:46] 2025-10-13 08:30:42,027 | INFO     | [monitor] control thread has ended
[2025-10-13 17:30:46] 2025-10-13 08:30:46,109 | INFO     | all workflow threads have been joined
[2025-10-13 17:30:46] 2025-10-13 08:30:46,109 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 17:30:46] 2025-10-13 08:30:46,109 | INFO     | traces error code: 0
[2025-10-13 17:30:46] 2025-10-13 08:30:46,109 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 17:30:46] 2025-10-13 08:30:46,164 [wrapper] ==== pilot stdout END ====
[2025-10-13 17:30:46] 2025-10-13 08:30:46,165 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 17:30:46] 2025-10-13 08:30:46,167 [wrapper] pilotpid: 2753612
[2025-10-13 17:30:46] 2025-10-13 08:30:46,168 [wrapper] Pilot exit status: 0
[2025-10-13 17:30:46] 2025-10-13 08:30:46,173 [wrapper] pandaids: 6840748828
[2025-10-13 17:30:46] 2025-10-13 08:30:46,191 [wrapper] cleanup supervisor_pilot 2796432 2753613
[2025-10-13 17:30:46] 2025-10-13 08:30:46,192 [wrapper] Test setup, not cleaning
[2025-10-13 17:30:46] 2025-10-13 08:30:46,194 [wrapper] apfmon messages muted
[2025-10-13 17:30:46] 2025-10-13 08:30:46,195 [wrapper] ==== wrapper stdout END ====
[2025-10-13 17:30:46] 2025-10-13 08:30:46,197 [wrapper] ==== wrapper stderr END ====
[2025-10-13 17:30:46]  *** Error codes and diagnostics ***
[2025-10-13 17:30:46]     "exeErrorCode": 0,
[2025-10-13 17:30:46]     "exeErrorDiag": "",
[2025-10-13 17:30:46]     "pilotErrorCode": 0,
[2025-10-13 17:30:46]     "pilotErrorDiag": "",
[2025-10-13 17:30:46]  *** Listing of results directory ***
[2025-10-13 17:30:46] total 412276
[2025-10-13 17:30:46] -rw-r--r--. 1 boinc boinc    557409 Oct 13 05:08 pilot3.tar.gz
[2025-10-13 17:30:46] -rw-r--r--. 1 boinc boinc      5112 Oct 13 05:12 queuedata.json
[2025-10-13 17:30:46] -rwx------. 1 boinc boinc     36292 Oct 13 05:12 runpilot2-wrapper.sh
[2025-10-13 17:30:46] -rw-r--r--. 1 boinc boinc       100 Oct 13 16:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 17:30:46] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 16:13 run_atlas
[2025-10-13 17:30:46] -rw-r--r--. 1 boinc boinc       105 Oct 13 16:13 job.xml
[2025-10-13 17:30:46] -rw-r--r--. 2 boinc boinc     15120 Oct 13 16:13 start_atlas.sh
[2025-10-13 17:30:46] drwxrwx--x. 2 boinc boinc        68 Oct 13 16:13 shared
[2025-10-13 17:30:46] -rw-r--r--. 2 boinc boinc    569684 Oct 13 16:13 input.tar.gz
[2025-10-13 17:30:46] -rw-r--r--. 1 boinc boinc      9465 Oct 13 16:13 init_data.xml
[2025-10-13 17:30:46] -rw-r--r--. 2 boinc boinc 222313244 Oct 13 16:13 EVNT.46676267._002143.pool.root.1
[2025-10-13 17:30:46] -rw-r--r--. 1 boinc boinc         0 Oct 13 16:13 boinc_lockfile
[2025-10-13 17:30:46] -rw-r--r--. 1 boinc boinc      2550 Oct 13 16:13 pandaJob.out
[2025-10-13 17:30:46] -rw-------. 1 boinc boinc    972849 Oct 13 16:13 agis_schedconf.cvmfs.json
[2025-10-13 17:30:46] -rw-------. 1 boinc boinc   1560580 Oct 13 16:13 agis_ddmendpoints.agis.ALL.json
[2025-10-13 17:30:46] drwx------. 5 boinc boinc      4096 Oct 13 16:13 pilot3
[2025-10-13 17:30:46] -rw-------. 1 boinc boinc        95 Oct 13 17:29 pilot_heartbeat.json
[2025-10-13 17:30:46] -rw-r--r--. 1 boinc boinc       529 Oct 13 17:29 boinc_task_state.xml
[2025-10-13 17:30:46] -rw-------. 1 boinc boinc 193996625 Oct 13 17:29 HITS.46676269._088394.pool.root.1
[2025-10-13 17:30:46] -rw-------. 1 boinc boinc      1020 Oct 13 17:29 memory_monitor_summary.json
[2025-10-13 17:30:46] -rw-------. 1 boinc boinc    299116 Oct 13 17:29 log.46676269._088394.job.log.tgz.1
[2025-10-13 17:30:46] -rw-------. 1 boinc boinc      7753 Oct 13 17:30 heartbeat.json
[2025-10-13 17:30:46] -rw-r--r--. 1 boinc boinc      8192 Oct 13 17:30 boinc_mmap_file
[2025-10-13 17:30:46] -rw-r--r--. 1 boinc boinc        27 Oct 13 17:30 wrapper_checkpoint.txt
[2025-10-13 17:30:46] -rw-------. 1 boinc boinc      4624 Oct 13 17:30 pilotlog.txt
[2025-10-13 17:30:46] -rw-------. 1 boinc boinc    685875 Oct 13 17:30 log.46676269._088394.job.log.1
[2025-10-13 17:30:46] -rw-------. 1 boinc boinc       357 Oct 13 17:30 output.list
[2025-10-13 17:30:46] -rw-r--r--. 1 boinc boinc       620 Oct 13 17:30 runtime_log
[2025-10-13 17:30:46] -rw-------. 1 boinc boinc   1003520 Oct 13 17:30 result.tar.gz
[2025-10-13 17:30:46] -rw-r--r--. 1 boinc boinc      8661 Oct 13 17:30 runtime_log.err
[2025-10-13 17:30:46] -rw-------. 1 boinc boinc       641 Oct 13 17:30 PdYMDmybHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtOlNDmmZCA5n.diag
[2025-10-13 17:30:46] -rw-r--r--. 1 boinc boinc     21271 Oct 13 17:30 stderr.txt
[2025-10-13 17:30:46] HITS file was successfully produced:
[2025-10-13 17:30:46] -rw-------. 1 boinc boinc 193996625 Oct 13 17:29 shared/HITS.pool.root.1
[2025-10-13 17:30:46]  *** Contents of shared directory: ***
[2025-10-13 17:30:46] total 408112
[2025-10-13 17:30:46] -rw-r--r--. 2 boinc boinc     15120 Oct 13 16:13 start_atlas.sh
[2025-10-13 17:30:46] -rw-r--r--. 2 boinc boinc    569684 Oct 13 16:13 input.tar.gz
[2025-10-13 17:30:46] -rw-r--r--. 2 boinc boinc 222313244 Oct 13 16:13 ATLAS.root_0
[2025-10-13 17:30:46] -rw-------. 1 boinc boinc 193996625 Oct 13 17:29 HITS.pool.root.1
[2025-10-13 17:30:46] -rw-------. 1 boinc boinc   1003520 Oct 13 17:30 result.tar.gz
17:30:47 (2749838): run_atlas exited; CPU time 25080.147662
17:30:47 (2749838): called boinc_finish(0)

</stderr_txt>
]]>

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