Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:11:59 (22991): wrapper (7.7.26015): starting
20:11:59 (22991): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 20:11:59] Arguments: --nthreads 12
[2025-10-12 20:11:59] Threads: 12
[2025-10-12 20:11:59] Checking for CVMFS
[2025-10-12 20:11:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:11:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:11:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:12:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:12:00] 2.11.2.0 2937 223585 98720 151641 1 57 10180274 20275200 1 130560 1 109898332 99.984 13764912 13163 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 20:12:00] CVMFS is ok
[2025-10-12 20:12:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:12:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:12:00] Further information can be found at the LHC@home message board.
[2025-10-12 20:12:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:12:00] Checking for apptainer binary...
[2025-10-12 20:12:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:12:00] Running /usr/bin/apptainer --version
[2025-10-12 20:12:00] apptainer version 1.3.2-1.el7
[2025-10-12 20:12:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:12:01] c-205-8.aglt2.org
[2025-10-12 20:12:01] apptainer works
[2025-10-12 20:12:01] Set ATHENA_PROC_NUMBER=12
[2025-10-12 20:12:01] Set ATHENA_CORE_NUMBER=12
[2025-10-12 20:12:01] Starting ATLAS job with PandaID=6840711698
[2025-10-12 20:12:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:25:30]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:25:30]  protocol_id=None
[2025-10-12 21:25:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 21:25:30]  replicas=None
[2025-10-12 21:25:30]  scope=mc23_13p6TeV
[2025-10-12 21:25:30]  status=None
[2025-10-12 21:25:30]  status_code=0
[2025-10-12 21:25:30]  storage_token=
[2025-10-12 21:25:30]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840711698/log.46676269._087266.job.log.tgz.1
[2025-10-12 21:25:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/19/log.46676269._087266.job.log.tgz.1
[2025-10-12 21:25:30]  workdir=None
[2025-10-12 21:25:30] ]
[2025-10-12 21:25:30] 2025-10-13 01:24:55,451 | INFO     | transferring file log.46676269._087266.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840711698/log.46676269._087266.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 21:25:30] 2025-10-13 01:24:55,452 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840711698/log.46676269._087266.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._087266.job
[2025-10-12 21:25:30] 2025-10-13 01:24:55,473 | INFO     | adding to output.list: log.46676269._087266.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/19/log.46676269._087266.job.log.tg
[2025-10-12 21:25:30] 2025-10-13 01:24:55,474 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 21:25:30] 2025-10-13 01:24:55,475 | INFO     | summary of transferred files:
[2025-10-12 21:25:30] 2025-10-13 01:24:55,475 | INFO     |  -- lfn=log.46676269._087266.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 21:25:30] 2025-10-13 01:24:55,475 | INFO     | stage-out finished correctly
[2025-10-12 21:25:30] 2025-10-13 01:24:55,640 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 21:25:30] 2025-10-13 01:24:55,722 | INFO     | job 6840711698 has state=finished
[2025-10-12 21:25:30] 2025-10-13 01:24:55,722 | INFO     | preparing for final server update for job 6840711698 in state='finished'
[2025-10-12 21:25:30] 2025-10-13 01:24:55,723 | INFO     | this job has now completed (state=finished)
[2025-10-12 21:25:30] 2025-10-13 01:24:55,723 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 21:25:30] 2025-10-13 01:24:55,723 | INFO     | log transfer has been attempted: DONE
[2025-10-12 21:25:30] 2025-10-13 01:24:55,724 | INFO     | job 6840711698 has finished - writing final server update
[2025-10-12 21:25:30] 2025-10-13 01:24:55,724 | INFO     | total number of processed events: 400 (read)
[2025-10-12 21:25:30] 2025-10-13 01:24:55,725 | INFO     | executing command: lscpu
[2025-10-12 21:25:30] 2025-10-13 01:24:55,753 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 21:25:30] 2025-10-13 01:24:56,558 | INFO     | time since job start (4360s) is within the limit (172800.0s)
[2025-10-12 21:25:30] 2025-10-13 01:24:57,784 | INFO     | monitor loop #326: job 0:6840711698 is in state 'finished'
[2025-10-12 21:25:30] 2025-10-13 01:24:57,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:25:30] 2025-10-13 01:24:58,563 | INFO     | time since job start (4362s) is within the limit (172800.0s)
[2025-10-12 21:25:30] 2025-10-13 01:25:00,287 | INFO     | monitor loop #327: job 0:6840711698 is in state 'finished'
[2025-10-12 21:25:30] 2025-10-13 01:25:00,288 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:25:30] 2025-10-13 01:25:00,564 | INFO     | time since job start (4364s) is within the limit (172800.0s)
[2025-10-12 21:25:30] 2025-10-13 01:25:00,574 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 21:25:30] 2025-10-13 01:25:00,578 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-12 21:25:30] 2025-10-13 01:25:00,580 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840711698/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:25:30] 2025-10-13 01:25:00,581 | INFO     | extracted standard info from prmon json
[2025-10-12 21:25:30] 2025-10-13 01:25:00,581 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 21:25:30] 2025-10-13 01:25:00,581 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:25:30] 2025-10-13 01:25:00,581 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:25:30] 2025-10-13 01:25:00,582 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:25:30] 2025-10-13 01:25:00,583 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:25:30] 2025-10-13 01:25:00,583 | INFO     | sum of square deviations: 81266640.0
[2025-10-12 21:25:30] 2025-10-13 01:25:00,584 | INFO     | sum of deviations: -988271370.0
[2025-10-12 21:25:30] 2025-10-13 01:25:00,584 | INFO     | mean x: 1760316591.5
[2025-10-12 21:25:30] 2025-10-13 01:25:00,584 | INFO     | mean y: 2687758.9375
[2025-10-12 21:25:30] 2025-10-13 01:25:00,584 | INFO     | -- intersect: 21409632718.33825
[2025-10-12 21:25:30] 2025-10-13 01:25:00,584 | INFO     | intersect: 21409632718.33825
[2025-10-12 21:25:30] 2025-10-13 01:25:00,584 | INFO     | chi2: 0.022741223942235378
[2025-10-12 21:25:30] 2025-10-13 01:25:00,584 | INFO     | -- intersect: 21409632718.33825
[2025-10-12 21:25:30] 2025-10-13 01:25:00,585 | INFO     | current memory leak: -12.16 B/s (using 64 data points, chi2=0.02)
[2025-10-12 21:25:30] 2025-10-13 01:25:00,585 | INFO     | could have reported an average CPU frequency of 2034 MHz (6 samples)
[2025-10-12 21:25:30] 2025-10-13 01:25:00,585 | INFO     | ..............................
[2025-10-12 21:25:30] 2025-10-13 01:25:00,585 | INFO     | . Timing measurements:
[2025-10-12 21:25:30] 2025-10-13 01:25:00,585 | INFO     | . get job = 0 s
[2025-10-12 21:25:30] 2025-10-13 01:25:00,585 | INFO     | . initial setup = 2 s
[2025-10-12 21:25:30] 2025-10-13 01:25:00,585 | INFO     | . payload setup = 7 s
[2025-10-12 21:25:30] 2025-10-13 01:25:00,585 | INFO     | . stage-in = 0 s
[2025-10-12 21:25:30] 2025-10-13 01:25:00,586 | INFO     | . payload execution = 4329 s
[2025-10-12 21:25:30] 2025-10-13 01:25:00,586 | INFO     | . stage-out = 0 s
[2025-10-12 21:25:30] 2025-10-13 01:25:00,586 | INFO     | . log creation = 0 s
[2025-10-12 21:25:30] 2025-10-13 01:25:00,586 | INFO     | ..............................
[2025-10-12 21:25:30] 2025-10-13 01:25:00,670 | INFO     | 
[2025-10-12 21:25:30] 2025-10-13 01:25:00,670 | INFO     | job summary report
[2025-10-12 21:25:30] 2025-10-13 01:25:00,670 | INFO     | --------------------------------------------------
[2025-10-12 21:25:30] 2025-10-13 01:25:00,670 | INFO     | PanDA job id: 6840711698
[2025-10-12 21:25:30] 2025-10-13 01:25:00,670 | INFO     | task id: 46676269
[2025-10-12 21:25:30] 2025-10-13 01:25:00,670 | INFO     | errors: (none)
[2025-10-12 21:25:30] 2025-10-13 01:25:00,671 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:25:30] 2025-10-13 01:25:00,671 | INFO     | pilot state: finished 
[2025-10-12 21:25:30] 2025-10-13 01:25:00,671 | INFO     | transexitcode: 0
[2025-10-12 21:25:30] 2025-10-13 01:25:00,671 | INFO     | exeerrorcode: 0
[2025-10-12 21:25:30] 2025-10-13 01:25:00,671 | INFO     | exeerrordiag: 
[2025-10-12 21:25:30] 2025-10-13 01:25:00,671 | INFO     | exitcode: 0
[2025-10-12 21:25:30] 2025-10-13 01:25:00,672 | INFO     | exitmsg: OK
[2025-10-12 21:25:30] 2025-10-13 01:25:00,672 | INFO     | cpuconsumptiontime: 46974 s
[2025-10-12 21:25:30] 2025-10-13 01:25:00,672 | INFO     | nevents: 400
[2025-10-12 21:25:30] 2025-10-13 01:25:00,672 | INFO     | neventsw: 0
[2025-10-12 21:25:30] 2025-10-13 01:25:00,672 | INFO     | pid: 613
[2025-10-12 21:25:30] 2025-10-13 01:25:00,672 | INFO     | pgrp: 613
[2025-10-12 21:25:30] 2025-10-13 01:25:00,672 | INFO     | corecount: 12
[2025-10-12 21:25:30] 2025-10-13 01:25:00,673 | INFO     | event service: False
[2025-10-12 21:25:30] 2025-10-13 01:25:00,673 | INFO     | sizes: {0: 2348685, 1: 2348884, 5: 2349146, 11: 2349202, 4340: 2375248, 4343: 2384430, 4348: 2384568}
[2025-10-12 21:25:30] 2025-10-13 01:25:00,673 | INFO     | --------------------------------------------------
[2025-10-12 21:25:30] 2025-10-13 01:25:00,673 | INFO     | 
[2025-10-12 21:25:30] 2025-10-13 01:25:00,673 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 21:25:30] 2025-10-13 01:25:00,699 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:25:30] 2025-10-13 01:25:00,699 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:25:30] 2025-10-13 01:25:00,699 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:25:30] 2025-10-13 01:25:00,699 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:25:30] 2025-10-13 01:25:00,699 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:25:30] 2025-10-13 01:25:00,700 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:25:30] 2025-10-13 01:25:00,700 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:25:30] 2025-10-13 01:25:00,700 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:25:30] 2025-10-13 01:25:00,700 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:25:30] 2025-10-13 01:25:00,700 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:25:30] 2025-10-13 01:25:00,700 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:25:30] 2025-10-13 01:25:00,701 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:25:30] 2025-10-13 01:25:00,701 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:25:30] 2025-10-13 01:25:00,701 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:25:30] 2025-10-13 01:25:00,701 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:25:30] 2025-10-13 01:25:00,701 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:25:30] 2025-10-13 01:25:00,701 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:25:30] 2025-10-13 01:25:00,702 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:25:30] 2025-10-13 01:25:00,702 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:25:30] 2025-10-13 01:25:00,702 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:25:30] 2025-10-13 01:25:00,702 | INFO     | job 6840711698 has completed (purged errors)
[2025-10-12 21:25:30] 2025-10-13 01:25:00,702 | INFO     | overall cleanup function is called
[2025-10-12 21:25:30] 2025-10-13 01:25:01,710 | INFO     | --- collectZombieJob: --- 10, [613]
[2025-10-12 21:25:30] 2025-10-13 01:25:01,710 | INFO     | zombie collector waiting for pid 613
[2025-10-12 21:25:30] 2025-10-13 01:25:01,717 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:25:30] 2025-10-13 01:25:01,718 | INFO     | collected zombie processes
[2025-10-12 21:25:30] 2025-10-13 01:25:01,718 | INFO     | will attempt to kill all subprocesses of pid=613
[2025-10-12 21:25:30] 2025-10-13 01:25:01,808 | INFO     | process IDs to be killed: [613] (in reverse order)
[2025-10-12 21:25:30] 2025-10-13 01:25:01,859 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:25:30] 2025-10-13 01:25:01,859 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:25:30] 2025-10-13 01:25:01,863 | INFO     | did not find any defunct processes belonging to 613
[2025-10-12 21:25:30] 2025-10-13 01:25:01,867 | INFO     | did not find any defunct processes belonging to 613
[2025-10-12 21:25:30] 2025-10-13 01:25:01,867 | INFO     | ready for new job
[2025-10-12 21:25:30] 2025-10-13 01:25:01,867 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:25:30] 2025-10-13 01:25:01,869 | INFO     | ***************************************
[2025-10-12 21:25:30] 2025-10-13 01:25:01,869 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:25:30] 2025-10-13 01:25:01,869 | INFO     | ***************************************
[2025-10-12 21:25:30] 2025-10-13 01:25:01,869 | INFO     | 
[2025-10-12 21:25:30] 2025-10-13 01:25:01,870 | INFO     | architecture information:
[2025-10-12 21:25:30] 2025-10-13 01:25:01,870 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:25:30] 2025-10-13 01:25:01,885 | INFO     | cat /etc/os-release:
[2025-10-12 21:25:30] NAME="CentOS Linux"
[2025-10-12 21:25:30] VERSION="7 (Core)"
[2025-10-12 21:25:30] ID="centos"
[2025-10-12 21:25:30] ID_LIKE="rhel fedora"
[2025-10-12 21:25:30] VERSION_ID="7"
[2025-10-12 21:25:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:25:30] ANSI_COLOR="0;31"
[2025-10-12 21:25:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:25:30] HOME_URL="https://www.centos.org/"
[2025-10-12 21:25:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:25:30] 
[2025-10-12 21:25:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:25:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:25:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:25:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:25:30] 
[2025-10-12 21:25:30] 2025-10-13 01:25:01,885 | INFO     | ***************************************
[2025-10-12 21:25:30] 2025-10-13 01:25:02,388 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 21:25:30] 2025-10-13 01:25:02,406 | INFO     | sufficient remaining disk space (29353836544 B)
[2025-10-12 21:25:30] 2025-10-13 01:25:02,406 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:25:30] 2025-10-13 01:25:02,406 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:25:30] 2025-10-13 01:25:02,406 | INFO     | update_server=False
[2025-10-12 21:25:30] 2025-10-13 01:25:02,407 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:25:30] 2025-10-13 01:25:02,407 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:25:30] 2025-10-13 01:25:02,407 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:25:30] 2025-10-13 01:25:02,408 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 21:25:30] 2025-10-13 01:25:02,408 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:25:30] 2025-10-13 01:25:02,408 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:25:30] 2025-10-13 01:25:02,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:25:30] 2025-10-13 01:25:02,489 | INFO     | all payload control threads have been joined
[2025-10-12 21:25:30] 2025-10-13 01:25:02,585 | INFO     | all data control threads have been joined
[2025-10-12 21:25:30] 2025-10-13 01:25:02,791 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 21:25:30] 2025-10-13 01:25:02,791 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 21:25:30] 2025-10-13 01:25:02,791 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:25:30] 2025-10-13 01:25:02,791 | INFO     | will abort loop
[2025-10-12 21:25:30] 2025-10-13 01:25:03,388 | INFO     | all job control threads have been joined
[2025-10-12 21:25:30] 2025-10-13 01:25:03,412 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:25:30] 2025-10-13 01:25:03,413 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:25:30] 2025-10-13 01:25:03,492 | INFO     | [payload] control thread has finished
[2025-10-12 21:25:30] 2025-10-13 01:25:03,570 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:25:30] 2025-10-13 01:25:03,590 | INFO     | [data] control thread has finished
[2025-10-12 21:25:30] 2025-10-13 01:25:03,731 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:25:30] 2025-10-13 01:25:03,797 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:25:30] 2025-10-13 01:25:03,947 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:25:30] 2025-10-13 01:25:04,202 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:25:30] 2025-10-13 01:25:04,393 | INFO     | [job] control thread has finished
[2025-10-12 21:25:30] 2025-10-13 01:25:04,616 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:25:30] 2025-10-13 01:25:04,635 | INFO     | [job] validate thread has finished
[2025-10-12 21:25:30] 2025-10-13 01:25:04,655 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:25:30] 2025-10-13 01:25:04,753 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:25:30] 2025-10-13 01:25:04,863 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:25:30] 2025-10-13 01:25:05,576 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:25:30] 2025-10-13 01:25:06,414 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:25:30] 2025-10-13 01:25:23,099 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:25:30] 2025-10-13 01:25:24,844 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140270243444544)>', '<ExcThread(monitor, started 140269622105856)>']
[2025-10-12 21:25:30] 2025-10-13 01:25:25,519 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:25:30] 2025-10-13 01:25:25,519 | INFO     | [monitor] control thread has ended
[2025-10-12 21:25:30] 2025-10-13 01:25:29,870 | INFO     | all workflow threads have been joined
[2025-10-12 21:25:30] 2025-10-13 01:25:29,872 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:25:30] 2025-10-13 01:25:29,874 | INFO     | traces error code: 0
[2025-10-12 21:25:30] 2025-10-13 01:25:29,875 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:25:30] 2025-10-13 01:25:29,975 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:25:30] 2025-10-13 01:25:29,978 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:25:30] 2025-10-13 01:25:29,982 [wrapper] pilotpid: 26708
[2025-10-12 21:25:30] 2025-10-13 01:25:29,985 [wrapper] Pilot exit status: 0
[2025-10-12 21:25:30] 2025-10-13 01:25:30,000 [wrapper] pandaids: 6840711698
[2025-10-12 21:25:30] 2025-10-13 01:25:30,038 [wrapper] cleanup supervisor_pilot 11350 26709
[2025-10-12 21:25:30] 2025-10-13 01:25:30,041 [wrapper] Test setup, not cleaning
[2025-10-12 21:25:30] 2025-10-13 01:25:30,045 [wrapper] apfmon messages muted
[2025-10-12 21:25:30] 2025-10-13 01:25:30,049 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:25:30] 2025-10-13 01:25:30,052 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:25:30]  *** Error codes and diagnostics ***
[2025-10-12 21:25:30]     "exeErrorCode": 0,
[2025-10-12 21:25:30]     "exeErrorDiag": "",
[2025-10-12 21:25:30]     "pilotErrorCode": 0,
[2025-10-12 21:25:30]     "pilotErrorDiag": "",
[2025-10-12 21:25:30]  *** Listing of results directory ***
[2025-10-12 21:25:30] total 411328
[2025-10-12 21:25:30] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 14:53 pilot3.tar.gz
[2025-10-12 21:25:30] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 15:15 queuedata.json
[2025-10-12 21:25:30] -rwx------ 1 boincer umatlas     36292 Oct 12 15:17 runpilot2-wrapper.sh
[2025-10-12 21:25:30] -rw-r--r-- 1 boincer umatlas       100 Oct 12 20:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:25:30] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 20:11 run_atlas
[2025-10-12 21:25:30] -rw-r--r-- 1 boincer umatlas       105 Oct 12 20:11 job.xml
[2025-10-12 21:25:30] -rw-r--r-- 2 boincer umatlas 222382289 Oct 12 20:11 EVNT.46676267._004445.pool.root.1
[2025-10-12 21:25:30] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:11 start_atlas.sh
[2025-10-12 21:25:30] drwxrwx--x 2 boincer umatlas      4096 Oct 12 20:11 shared
[2025-10-12 21:25:30] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 20:11 input.tar.gz
[2025-10-12 21:25:30] -rw-r--r-- 1 boincer umatlas         0 Oct 12 20:11 boinc_lockfile
[2025-10-12 21:25:30] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 20:12 pandaJob.out
[2025-10-12 21:25:30] -rw------- 1 boincer umatlas    975603 Oct 12 20:12 agis_schedconf.cvmfs.json
[2025-10-12 21:25:30] -rw------- 1 boincer umatlas   1560580 Oct 12 20:12 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:25:30] drwx------ 5 boincer umatlas      4096 Oct 12 20:12 pilot3
[2025-10-12 21:25:30] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 21:22 init_data.xml
[2025-10-12 21:25:30] -rw------- 1 boincer umatlas        95 Oct 12 21:24 pilot_heartbeat.json
[2025-10-12 21:25:30] -rw------- 1 boincer umatlas 192885220 Oct 12 21:24 HITS.46676269._087266.pool.root.1
[2025-10-12 21:25:30] -rw-r--r-- 1 boincer umatlas       529 Oct 12 21:24 boinc_task_state.xml
[2025-10-12 21:25:30] -rw------- 1 boincer umatlas      1049 Oct 12 21:24 memory_monitor_summary.json
[2025-10-12 21:25:30] -rw------- 1 boincer umatlas    379943 Oct 12 21:24 log.46676269._087266.job.log.tgz.1
[2025-10-12 21:25:30] -rw------- 1 boincer umatlas      7851 Oct 12 21:25 heartbeat.json
[2025-10-12 21:25:30] -rw-r--r-- 1 boincer umatlas        27 Oct 12 21:25 wrapper_checkpoint.txt
[2025-10-12 21:25:30] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 21:25 boinc_mmap_file
[2025-10-12 21:25:30] -rw------- 1 boincer umatlas      4738 Oct 12 21:25 pilotlog.txt
[2025-10-12 21:25:30] -rw------- 1 boincer umatlas    632303 Oct 12 21:25 log.46676269._087266.job.log.1
[2025-10-12 21:25:30] -rw------- 1 boincer umatlas       357 Oct 12 21:25 output.list
[2025-10-12 21:25:30] -rw-r--r-- 1 boincer umatlas       620 Oct 12 21:25 runtime_log
[2025-10-12 21:25:30] -rw------- 1 boincer umatlas   1034240 Oct 12 21:25 result.tar.gz
[2025-10-12 21:25:30] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 21:25 runtime_log.err
[2025-10-12 21:25:30] -rw------- 1 boincer umatlas       658 Oct 12 21:25 74dLDmNkGS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnFlNDmPgE7Gn.diag
[2025-10-12 21:25:30] -rw-r--r-- 1 boincer umatlas     21649 Oct 12 21:25 stderr.txt
[2025-10-12 21:25:30] HITS file was successfully produced:
[2025-10-12 21:25:30] -rw------- 1 boincer umatlas 192885220 Oct 12 21:24 shared/HITS.pool.root.1
[2025-10-12 21:25:30]  *** Contents of shared directory: ***
[2025-10-12 21:25:30] total 407132
[2025-10-12 21:25:30] -rw-r--r-- 2 boincer umatlas 222382289 Oct 12 20:11 ATLAS.root_0
[2025-10-12 21:25:30] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 20:11 start_atlas.sh
[2025-10-12 21:25:30] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 20:11 input.tar.gz
[2025-10-12 21:25:30] -rw------- 1 boincer umatlas 192885220 Oct 12 21:24 HITS.pool.root.1
[2025-10-12 21:25:30] -rw------- 1 boincer umatlas   1034240 Oct 12 21:25 result.tar.gz
21:25:31 (22991): run_atlas exited; CPU time 46950.225331
21:25:31 (22991): called boinc_finish(0)

</stderr_txt>
]]>

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