Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:35:41 (1243554): wrapper (7.7.26015): starting
22:35:41 (1243554): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 22:35:41] Arguments: --nthreads 8
[2025-10-12 22:35:41] Threads: 8
[2025-10-12 22:35:41] Checking for CVMFS
[2025-10-12 22:35:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:35:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:35:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:35:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:35:43] 2.13.2.0 3695926 130108 249936 151645 1 268 18257219 32935936 27414 16776704 0 217922272 99.574 251313850 29093 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 22:35:43] CVMFS is ok
[2025-10-12 22:35:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:35:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:35:43] Further information can be found at the LHC@home message board.
[2025-10-12 22:35:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:35:43] Checking for apptainer binary...
[2025-10-12 22:35:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:35:43] Running /usr/bin/apptainer --version
[2025-10-12 22:35:43] apptainer version 1.4.3-1.el9
[2025-10-12 22:35:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:35:44] c6-4-5-3.aglt2.org
[2025-10-12 22:35:44] apptainer works
[2025-10-12 22:35:44] Set ATHENA_PROC_NUMBER=8
[2025-10-12 22:35:44] Set ATHENA_CORE_NUMBER=8
[2025-10-12 22:35:44] Starting ATLAS job with PandaID=6840715300
[2025-10-12 22:35:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:40:08 (1243554): BOINC client no longer exists - exiting
23:40:08 (1243554): timer handler: client dead, exiting
23:46:30 (1478456): wrapper (7.7.26015): starting
23:46:30 (1478456): wrapper: running run_atlas (--nthreads 10)
[2025-10-12 23:46:30] Arguments: --nthreads 10
[2025-10-12 23:46:30] Threads: 10
[2025-10-12 23:46:30] This job has been restarted, cleaning up previous attempt
[2025-10-12 23:46:30] Checking for CVMFS
[2025-10-12 23:46:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:46:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:46:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:46:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:46:30] 2.13.2.0 3695926 130179 257944 151647 3 447 18505337 32935936 24511 16776704 0 218107864 99.574 251316573 29093 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 23:46:30] CVMFS is ok
[2025-10-12 23:46:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:46:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:46:30] Further information can be found at the LHC@home message board.
[2025-10-12 23:46:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:46:30] Checking for apptainer binary...
[2025-10-12 23:46:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:46:30] Running /usr/bin/apptainer --version
[2025-10-12 23:46:31] apptainer version 1.4.3-1.el9
[2025-10-12 23:46:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:46:31] c6-4-5-3.aglt2.org
[2025-10-12 23:46:31] apptainer works
[2025-10-12 23:46:31] Set ATHENA_PROC_NUMBER=10
[2025-10-12 23:46:31] Set ATHENA_CORE_NUMBER=10
[2025-10-12 23:46:31] Starting ATLAS job with PandaID=6840715300
[2025-10-12 23:46:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:04:50]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:04:50] 2025-10-13 11:04:06,450 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:04:50] 2025-10-13 11:04:06,455 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:04:50] 2025-10-13 11:04:06,455 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:04:50] 2025-10-13 11:04:06,472 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:04:50] 2025-10-13 11:04:06,473 | INFO     | sum of square deviations: 24481359575.11888
[2025-10-13 07:04:50] 2025-10-13 11:04:06,487 | INFO     | sum of deviations: 76313704257.46852
[2025-10-13 07:04:50] 2025-10-13 11:04:06,488 | INFO     | mean x: 1760340327.7902098
[2025-10-13 07:04:50] 2025-10-13 11:04:06,488 | INFO     | mean y: 2186185.3496503495
[2025-10-13 07:04:50] 2025-10-13 11:04:06,488 | INFO     | -- intersect: -5485176179.280171
[2025-10-13 07:04:50] 2025-10-13 11:04:06,488 | INFO     | intersect: -5485176179.280171
[2025-10-13 07:04:50] 2025-10-13 11:04:06,489 | INFO     | chi2: 2.6890414252483406
[2025-10-13 07:04:50] 2025-10-13 11:04:06,490 | INFO     | sum of square deviations: 23635381986.959866
[2025-10-13 07:04:50] 2025-10-13 11:04:06,498 | INFO     | sum of deviations: 110876263315.35855
[2025-10-13 07:04:50] 2025-10-13 11:04:06,502 | INFO     | mean x: 1760340175.2995284
[2025-10-13 07:04:50] 2025-10-13 11:04:06,502 | INFO     | mean y: 2192376.7924528304
[2025-10-13 07:04:50] 2025-10-13 11:04:06,502 | INFO     | -- intersect: -8255763467.069084
[2025-10-13 07:04:50] 2025-10-13 11:04:06,503 | INFO     | intersect: -8255763467.069084
[2025-10-13 07:04:50] 2025-10-13 11:04:06,503 | INFO     | chi2: 1.8683525598057342
[2025-10-13 07:04:50] 2025-10-13 11:04:06,504 | INFO     | current chi2=1.8683525598057342 (change=30.519755394501345 %)
[2025-10-13 07:04:50] 2025-10-13 11:04:06,504 | INFO     | sum of square deviations: 22809099957.34105
[2025-10-13 07:04:50] 2025-10-13 11:04:06,516 | INFO     | sum of deviations: 116617254299.08836
[2025-10-13 07:04:50] 2025-10-13 11:04:06,516 | INFO     | mean x: 1760340022.8066826
[2025-10-13 07:04:50] 2025-10-13 11:04:06,516 | INFO     | mean y: 2193434.754176611
[2025-10-13 07:04:50] 2025-10-13 11:04:06,516 | INFO     | -- intersect: -8997987215.795303
[2025-10-13 07:04:50] 2025-10-13 11:04:06,517 | INFO     | intersect: -8997987215.795303
[2025-10-13 07:04:50] 2025-10-13 11:04:06,517 | INFO     | chi2: 1.8478505772048284
[2025-10-13 07:04:50] 2025-10-13 11:04:06,517 | INFO     | current chi2=1.8478505772048284 (change=1.0973294356734036 %)
[2025-10-13 07:04:50] 2025-10-13 11:04:06,518 | INFO     | right removable region: 418
[2025-10-13 07:04:50] 2025-10-13 11:04:06,518 | INFO     | sum of square deviations: 23635175196.95987
[2025-10-13 07:04:50] 2025-10-13 11:04:06,534 | INFO     | sum of deviations: 5017487966.226391
[2025-10-13 07:04:50] 2025-10-13 11:04:06,534 | INFO     | mean x: 1760340480.2995284
[2025-10-13 07:04:50] 2025-10-13 11:04:06,534 | INFO     | mean y: 2198990.132075472
[2025-10-13 07:04:50] 2025-10-13 11:04:06,535 | INFO     | -- intersect: -371501949.3684774
[2025-10-13 07:04:50] 2025-10-13 11:04:06,535 | INFO     | intersect: -371501949.3684774
[2025-10-13 07:04:50] 2025-10-13 11:04:06,535 | INFO     | chi2: 1.046823146978595
[2025-10-13 07:04:50] 2025-10-13 11:04:06,536 | INFO     | current chi2=1.046823146978595 (change=61.07076904246955 %)
[2025-10-13 07:04:50] 2025-10-13 11:04:06,536 | INFO     | sum of square deviations: 22808815333.159897
[2025-10-13 07:04:50] 2025-10-13 11:04:06,547 | INFO     | sum of deviations: -3016793900.8830643
[2025-10-13 07:04:50] 2025-10-13 11:04:06,548 | INFO     | mean x: 1760340632.7995226
[2025-10-13 07:04:50] 2025-10-13 11:04:06,548 | INFO     | mean y: 2200464.584725537
[2025-10-13 07:04:50] 2025-10-13 11:04:06,548 | INFO     | -- intersect: 235030833.32314932
[2025-10-13 07:04:50] 2025-10-13 11:04:06,548 | INFO     | intersect: 235030833.32314932
[2025-10-13 07:04:50] 2025-10-13 11:04:06,549 | INFO     | chi2: 1.0108025557039422
[2025-10-13 07:04:50] 2025-10-13 11:04:06,549 | INFO     | current chi2=1.0108025557039422 (change=3.440943332082174 %)
[2025-10-13 07:04:50] 2025-10-13 11:04:06,549 | INFO     | left removable region: 20
[2025-10-13 07:04:50] 2025-10-13 11:04:06,554 | INFO     | sum of square deviations: 19548382922.834305
[2025-10-13 07:04:50] 2025-10-13 11:04:06,564 | INFO     | sum of deviations: 41555965305.94468
[2025-10-13 07:04:50] 2025-10-13 11:04:06,564 | INFO     | mean x: 1760340602.321608
[2025-10-13 07:04:50] 2025-10-13 11:04:06,564 | INFO     | mean y: 2207718.773869347
[2025-10-13 07:04:50] 2025-10-13 11:04:06,564 | INFO     | -- intersect: -3739925494.264099
[2025-10-13 07:04:50] 2025-10-13 11:04:06,565 | INFO     | intersect: -3739925494.264099
[2025-10-13 07:04:50] 2025-10-13 11:04:06,565 | INFO     | chi2: 0.1556526352723493
[2025-10-13 07:04:50] 2025-10-13 11:04:06,565 | INFO     | -- intersect: -3739925494.264099
[2025-10-13 07:04:50] 2025-10-13 11:04:06,566 | INFO     | current memory leak: 2.13 B/s (using 398 data points, chi2=0.16)
[2025-10-13 07:04:50] 2025-10-13 11:04:06,571 | INFO     | could have reported an average CPU frequency of 2861 MHz (18 samples)
[2025-10-13 07:04:50] 2025-10-13 11:04:06,571 | INFO     | ..............................
[2025-10-13 07:04:50] 2025-10-13 11:04:06,571 | INFO     | . Timing measurements:
[2025-10-13 07:04:50] 2025-10-13 11:04:06,571 | INFO     | . get job = 0 s
[2025-10-13 07:04:50] 2025-10-13 11:04:06,571 | INFO     | . initial setup = 1 s
[2025-10-13 07:04:50] 2025-10-13 11:04:06,572 | INFO     | . payload setup = 16 s
[2025-10-13 07:04:50] 2025-10-13 11:04:06,572 | INFO     | . stage-in = 0 s
[2025-10-13 07:04:50] 2025-10-13 11:04:06,572 | INFO     | . payload execution = 26136 s
[2025-10-13 07:04:50] 2025-10-13 11:04:06,572 | INFO     | . stage-out = 7 s
[2025-10-13 07:04:50] 2025-10-13 11:04:06,572 | INFO     | . log creation = 1 s
[2025-10-13 07:04:50] 2025-10-13 11:04:06,572 | INFO     | ..............................
[2025-10-13 07:04:50] 2025-10-13 11:04:06,814 | INFO     | 
[2025-10-13 07:04:50] 2025-10-13 11:04:06,814 | INFO     | job summary report
[2025-10-13 07:04:50] 2025-10-13 11:04:06,814 | INFO     | --------------------------------------------------
[2025-10-13 07:04:50] 2025-10-13 11:04:06,814 | INFO     | PanDA job id: 6840715300
[2025-10-13 07:04:50] 2025-10-13 11:04:06,814 | INFO     | task id: 46676269
[2025-10-13 07:04:50] 2025-10-13 11:04:06,814 | INFO     | errors: (none)
[2025-10-13 07:04:50] 2025-10-13 11:04:06,814 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:04:50] 2025-10-13 11:04:06,814 | INFO     | pilot state: finished 
[2025-10-13 07:04:50] 2025-10-13 11:04:06,814 | INFO     | transexitcode: 0
[2025-10-13 07:04:50] 2025-10-13 11:04:06,814 | INFO     | exeerrorcode: 0
[2025-10-13 07:04:50] 2025-10-13 11:04:06,815 | INFO     | exeerrordiag: 
[2025-10-13 07:04:50] 2025-10-13 11:04:06,815 | INFO     | exitcode: 0
[2025-10-13 07:04:50] 2025-10-13 11:04:06,815 | INFO     | exitmsg: OK
[2025-10-13 07:04:50] 2025-10-13 11:04:06,815 | INFO     | cpuconsumptiontime: 42486 s
[2025-10-13 07:04:50] 2025-10-13 11:04:06,815 | INFO     | nevents: 400
[2025-10-13 07:04:50] 2025-10-13 11:04:06,815 | INFO     | neventsw: 0
[2025-10-13 07:04:50] 2025-10-13 11:04:06,815 | INFO     | pid: 1522532
[2025-10-13 07:04:50] 2025-10-13 11:04:06,815 | INFO     | pgrp: 1522532
[2025-10-13 07:04:50] 2025-10-13 11:04:06,815 | INFO     | corecount: 10
[2025-10-13 07:04:50] 2025-10-13 11:04:06,815 | INFO     | event service: False
[2025-10-13 07:04:50] 2025-10-13 11:04:06,815 | INFO     | sizes: {0: 2348579, 1: 2348834, 2: 2348834, 12: 2349124, 23: 2349152, 26157: 2385444, 26165: 2394442, 26167: 2394498, 26201: 2394692}
[2025-10-13 07:04:50] 2025-10-13 11:04:06,815 | INFO     | --------------------------------------------------
[2025-10-13 07:04:50] 2025-10-13 11:04:06,815 | INFO     | 
[2025-10-13 07:04:50] 2025-10-13 11:04:06,815 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 07:04:50] 2025-10-13 11:04:06,878 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:04:50] 2025-10-13 11:04:06,879 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:04:50] 2025-10-13 11:04:06,879 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:04:50] 2025-10-13 11:04:06,879 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:04:50] 2025-10-13 11:04:06,879 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:04:50] 2025-10-13 11:04:06,879 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:04:50] 2025-10-13 11:04:06,879 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:04:50] 2025-10-13 11:04:06,879 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:04:50] 2025-10-13 11:04:06,879 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:04:50] 2025-10-13 11:04:06,879 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:04:50] 2025-10-13 11:04:06,880 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:04:50] 2025-10-13 11:04:06,880 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:04:50] 2025-10-13 11:04:06,880 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:04:50] 2025-10-13 11:04:06,880 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:04:50] 2025-10-13 11:04:06,880 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:04:50] 2025-10-13 11:04:06,880 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:04:50] 2025-10-13 11:04:06,880 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:04:50] 2025-10-13 11:04:06,880 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:04:50] 2025-10-13 11:04:06,880 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:04:50] 2025-10-13 11:04:06,880 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:04:50] 2025-10-13 11:04:06,880 | INFO     | job 6840715300 has completed (purged errors)
[2025-10-13 07:04:50] 2025-10-13 11:04:06,881 | INFO     | overall cleanup function is called
[2025-10-13 07:04:50] 2025-10-13 11:04:07,894 | INFO     | --- collectZombieJob: --- 10, [1522532]
[2025-10-13 07:04:50] 2025-10-13 11:04:07,894 | INFO     | zombie collector waiting for pid 1522532
[2025-10-13 07:04:50] 2025-10-13 11:04:07,894 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:04:50] 2025-10-13 11:04:07,894 | INFO     | collected zombie processes
[2025-10-13 07:04:50] 2025-10-13 11:04:07,895 | INFO     | will attempt to kill all subprocesses of pid=1522532
[2025-10-13 07:04:50] 2025-10-13 11:04:08,912 | INFO     | process IDs to be killed: [1522532] (in reverse order)
[2025-10-13 07:04:50] 2025-10-13 11:04:09,497 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:04:50] 2025-10-13 11:04:09,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:04:50] 2025-10-13 11:04:09,624 | INFO     | did not find any defunct processes belonging to 1522532
[2025-10-13 07:04:50] 2025-10-13 11:04:09,735 | INFO     | did not find any defunct processes belonging to 1522532
[2025-10-13 07:04:50] 2025-10-13 11:04:09,735 | INFO     | ready for new job
[2025-10-13 07:04:50] 2025-10-13 11:04:09,736 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:04:50] 2025-10-13 11:04:09,768 | INFO     | ***************************************
[2025-10-13 07:04:50] 2025-10-13 11:04:09,768 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:04:50] 2025-10-13 11:04:09,768 | INFO     | ***************************************
[2025-10-13 07:04:50] 2025-10-13 11:04:09,768 | INFO     | 
[2025-10-13 07:04:50] 2025-10-13 11:04:09,816 | INFO     | architecture information:
[2025-10-13 07:04:50] 2025-10-13 11:04:09,830 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:04:50] 2025-10-13 11:04:09,908 | INFO     | cat /etc/os-release:
[2025-10-13 07:04:50] NAME="CentOS Linux"
[2025-10-13 07:04:50] VERSION="7 (Core)"
[2025-10-13 07:04:50] ID="centos"
[2025-10-13 07:04:50] ID_LIKE="rhel fedora"
[2025-10-13 07:04:50] VERSION_ID="7"
[2025-10-13 07:04:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:04:50] ANSI_COLOR="0;31"
[2025-10-13 07:04:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:04:50] HOME_URL="https://www.centos.org/"
[2025-10-13 07:04:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:04:50] 
[2025-10-13 07:04:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:04:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:04:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:04:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:04:50] 
[2025-10-13 07:04:50] 2025-10-13 11:04:09,915 | INFO     | ***************************************
[2025-10-13 07:04:50] 2025-10-13 11:04:10,419 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 07:04:50] 2025-10-13 11:04:10,500 | INFO     | sufficient remaining disk space (75664195584 B)
[2025-10-13 07:04:50] 2025-10-13 11:04:10,501 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:04:50] 2025-10-13 11:04:10,501 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:04:50] 2025-10-13 11:04:10,501 | INFO     | update_server=False
[2025-10-13 07:04:50] 2025-10-13 11:04:10,501 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:04:50] 2025-10-13 11:04:10,502 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:04:50] 2025-10-13 11:04:10,721 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:04:50] 2025-10-13 11:04:10,721 | INFO     | aborting loop
[2025-10-13 07:04:50] 2025-10-13 11:04:10,799 | INFO     | all data control threads have been joined
[2025-10-13 07:04:50] 2025-10-13 11:04:10,818 | INFO     | all payload control threads have been joined
[2025-10-13 07:04:50] 2025-10-13 11:04:11,392 | INFO     | all job control threads have been joined
[2025-10-13 07:04:50] 2025-10-13 11:04:11,515 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:04:50] 2025-10-13 11:04:11,574 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:04:50] 2025-10-13 11:04:11,662 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:04:50] 2025-10-13 11:04:11,693 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:04:50] 2025-10-13 11:04:11,727 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:04:50] 2025-10-13 11:04:11,805 | INFO     | [data] control thread has finished
[2025-10-13 07:04:50] 2025-10-13 11:04:11,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:04:50] 2025-10-13 11:04:11,824 | INFO     | [payload] control thread has finished
[2025-10-13 07:04:50] 2025-10-13 11:04:11,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:04:50] 2025-10-13 11:04:12,398 | INFO     | [job] control thread has finished
[2025-10-13 07:04:50] 2025-10-13 11:04:12,409 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:04:50] 2025-10-13 11:04:12,818 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:04:50] 2025-10-13 11:04:12,849 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:04:50] 2025-10-13 11:04:12,849 | INFO     | [job] validate thread has finished
[2025-10-13 07:04:50] 2025-10-13 11:04:12,868 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:04:50] 2025-10-13 11:04:12,894 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:04:50] 2025-10-13 11:04:13,842 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:04:50] 2025-10-13 11:04:14,511 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:04:50] 2025-10-13 11:04:39,347 | INFO     | PID=1489556 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:04:50] 2025-10-13 11:04:39,347 | INFO     | .. there are 32 such processes running
[2025-10-13 07:04:50] 2025-10-13 11:04:39,352 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:04:50] 2025-10-13 11:04:39,352 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:04:50] 2025-10-13 11:04:39,352 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:04:50] 2025-10-13 11:04:43,124 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:04:50] 2025-10-13 11:04:43,665 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139894104921920)>', '<ExcThread(monitor, started 139893393061632)>']
[2025-10-13 07:04:50] 2025-10-13 11:04:44,393 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:04:50] 2025-10-13 11:04:44,393 | INFO     | [monitor] control thread has ended
[2025-10-13 07:04:50] 2025-10-13 11:04:48,691 | INFO     | all workflow threads have been joined
[2025-10-13 07:04:50] 2025-10-13 11:04:48,691 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:04:50] 2025-10-13 11:04:48,691 | INFO     | traces error code: 0
[2025-10-13 07:04:50] 2025-10-13 11:04:48,691 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:04:50] 2025-10-13 11:04:49,239 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:04:50] 2025-10-13 11:04:49,258 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:04:50] 2025-10-13 11:04:49,264 [wrapper] pilotpid: 1489556
[2025-10-13 07:04:50] 2025-10-13 11:04:49,299 [wrapper] Pilot exit status: 0
[2025-10-13 07:04:50] 2025-10-13 11:04:49,433 [wrapper] pandaids: 6840715300 6840715300
[2025-10-13 07:04:50] 2025-10-13 11:04:49,781 [wrapper] cleanup supervisor_pilot 3451631 1489557
[2025-10-13 07:04:50] 2025-10-13 11:04:49,784 [wrapper] Test setup, not cleaning
[2025-10-13 07:04:50] 2025-10-13 11:04:49,786 [wrapper] apfmon messages muted
[2025-10-13 07:04:50] 2025-10-13 11:04:49,789 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:04:50] 2025-10-13 11:04:49,791 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:04:50]  *** Error codes and diagnostics ***
[2025-10-13 07:04:50]     "exeErrorCode": 0,
[2025-10-13 07:04:50]     "exeErrorDiag": "",
[2025-10-13 07:04:50]     "pilotErrorCode": 0,
[2025-10-13 07:04:50]     "pilotErrorDiag": "",
[2025-10-13 07:04:50]  *** Listing of results directory ***
[2025-10-13 07:04:50] total 632092
[2025-10-13 07:04:50] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-13 07:04:50] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 15:50 pilot3.tar.gz
[2025-10-13 07:04:50] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:03 queuedata.json
[2025-10-13 07:04:50] -rwx------. 1 boincer umatlas     36292 Oct 12 16:04 runpilot2-wrapper.sh
[2025-10-13 07:04:50] -rw-r--r--. 1 boincer umatlas       100 Oct 12 22:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:04:50] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 22:35 run_atlas
[2025-10-13 07:04:50] -rw-r--r--. 1 boincer umatlas       105 Oct 12 22:35 job.xml
[2025-10-13 07:04:50] -rw-r--r--. 3 boincer umatlas 219464889 Oct 12 22:35 EVNT.46676267._004484.pool.root.1
[2025-10-13 07:04:50] -rw-r--r--. 3 boincer umatlas 219464889 Oct 12 22:35 ATLAS.root_0
[2025-10-13 07:04:50] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 22:35 shared
[2025-10-13 07:04:50] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 22:35 input.tar.gz
[2025-10-13 07:04:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 22:35 start_atlas.sh
[2025-10-13 07:04:50] -rw-r--r--. 1 boincer umatlas         0 Oct 12 22:35 boinc_lockfile
[2025-10-13 07:04:50] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 23:46 pandaJob.out
[2025-10-13 07:04:50] -rw-------. 1 boincer umatlas    974373 Oct 12 23:46 agis_schedconf.cvmfs.json
[2025-10-13 07:04:50] -rw-r--r--. 1 boincer umatlas      6856 Oct 13 07:02 init_data.xml
[2025-10-13 07:04:50] -rw-r--r--. 1 boincer umatlas       531 Oct 13 07:02 boinc_task_state.xml
[2025-10-13 07:04:50] -rw-------. 1 boincer umatlas 197014206 Oct 13 07:02 HITS.46676269._088252.pool.root.1
[2025-10-13 07:04:50] -rw-------. 1 boincer umatlas      1055 Oct 13 07:03 memory_monitor_summary.json
[2025-10-13 07:04:50] -rw-------. 1 boincer umatlas   1560580 Oct 13 07:03 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:04:50] -rw-------. 1 boincer umatlas    651217 Oct 13 07:03 log.46676269._088252.job.log.tgz.1
[2025-10-13 07:04:50] -rw-------. 1 boincer umatlas      7849 Oct 13 07:04 heartbeat.json
[2025-10-13 07:04:50] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:04 boinc_mmap_file
[2025-10-13 07:04:50] -rw-r--r--. 1 boincer umatlas        28 Oct 13 07:04 wrapper_checkpoint.txt
[2025-10-13 07:04:50] -rw-------. 1 boincer umatlas        96 Oct 13 07:04 pilot_heartbeat.json
[2025-10-13 07:04:50] -rw-------. 1 boincer umatlas      4824 Oct 13 07:04 pilotlog.txt
[2025-10-13 07:04:50] -rw-------. 1 boincer umatlas   3056616 Oct 13 07:04 log.46676269._088252.job.log.1
[2025-10-13 07:04:50] -rw-------. 1 boincer umatlas       357 Oct 13 07:04 output.list
[2025-10-13 07:04:50] -rw-r--r--. 1 boincer umatlas       620 Oct 13 07:04 runtime_log
[2025-10-13 07:04:50] -rw-------. 1 boincer umatlas   3727360 Oct 13 07:04 result.tar.gz
[2025-10-13 07:04:50] -rw-r--r--. 1 boincer umatlas      8791 Oct 13 07:04 runtime_log.err
[2025-10-13 07:04:50] -rw-------. 1 boincer umatlas       786 Oct 13 07:04 4UzKDm8THS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgNlNDmSFvOym.diag
[2025-10-13 07:04:50] -rw-r--r--. 1 boincer umatlas     23293 Oct 13 07:04 stderr.txt
[2025-10-13 07:04:50] HITS file was successfully produced:
[2025-10-13 07:04:50] -rw-------. 1 boincer umatlas 197014206 Oct 13 07:02 shared/HITS.pool.root.1
[2025-10-13 07:04:50]  *** Contents of shared directory: ***
[2025-10-13 07:04:50] total 410944
[2025-10-13 07:04:50] -rw-r--r--. 3 boincer umatlas 219464889 Oct 12 22:35 ATLAS.root_0
[2025-10-13 07:04:50] -rw-r--r--. 2 boincer umatlas    569676 Oct 12 22:35 input.tar.gz
[2025-10-13 07:04:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 22:35 start_atlas.sh
[2025-10-13 07:04:50] -rw-------. 1 boincer umatlas 197014206 Oct 13 07:02 HITS.pool.root.1
[2025-10-13 07:04:50] -rw-------. 1 boincer umatlas   3727360 Oct 13 07:04 result.tar.gz
07:04:51 (1478456): run_atlas exited; CPU time 43348.813434
07:04:51 (1478456): called boinc_finish(0)

</stderr_txt>
]]>

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