Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:58:03 (30434): wrapper (7.7.26015): starting
19:58:03 (30434): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 19:58:03] Arguments: --nthreads 12
[2025-10-12 19:58:03] Threads: 12
[2025-10-12 19:58:03] Checking for CVMFS
[2025-10-12 19:58:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:58:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:58:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:58:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:58:03] 2.11.2.0 3297 223525 93676 151641 2 56 15152365 20275201 1 130560 2 109806709 99.984 12999533 12321 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 19:58:03] CVMFS is ok
[2025-10-12 19:58:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:58:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:58:03] Further information can be found at the LHC@home message board.
[2025-10-12 19:58:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:58:03] Checking for apptainer binary...
[2025-10-12 19:58:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:58:03] Running /usr/bin/apptainer --version
[2025-10-12 19:58:03] apptainer version 1.3.2-1.el7
[2025-10-12 19:58:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:58:04] c-205-22.aglt2.org
[2025-10-12 19:58:04] apptainer works
[2025-10-12 19:58:04] Set ATHENA_PROC_NUMBER=12
[2025-10-12 19:58:04] Set ATHENA_CORE_NUMBER=12
[2025-10-12 19:58:04] Starting ATLAS job with PandaID=6840531934
[2025-10-12 19:58:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:12:32]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:12:32]  replicas=None
[2025-10-12 21:12:32]  scope=mc23_13p6TeV
[2025-10-12 21:12:32]  status=None
[2025-10-12 21:12:32]  status_code=0
[2025-10-12 21:12:32]  storage_token=
[2025-10-12 21:12:32]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840531934/log.46676269._085955.job.log.tgz.1
[2025-10-12 21:12:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/47/log.46676269._085955.job.log.tgz.1
[2025-10-12 21:12:32]  workdir=None
[2025-10-12 21:12:32] ]
[2025-10-12 21:12:32] 2025-10-13 01:11:43,582 | INFO     | transferring file log.46676269._085955.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840531934/log.46676269._085955.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 21:12:32] 2025-10-13 01:11:43,583 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840531934/log.46676269._085955.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._085955.job
[2025-10-12 21:12:32] 2025-10-13 01:11:43,607 | INFO     | adding to output.list: log.46676269._085955.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/47/log.46676269._085955.job.log.tg
[2025-10-12 21:12:32] 2025-10-13 01:11:43,608 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 21:12:32] 2025-10-13 01:11:43,608 | INFO     | summary of transferred files:
[2025-10-12 21:12:32] 2025-10-13 01:11:43,608 | INFO     |  -- lfn=log.46676269._085955.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 21:12:32] 2025-10-13 01:11:43,608 | INFO     | stage-out finished correctly
[2025-10-12 21:12:32] 2025-10-13 01:11:43,693 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 21:12:32] 2025-10-13 01:11:44,419 | INFO     | time since job start (4405s) is within the limit (172800.0s)
[2025-10-12 21:12:32] 2025-10-13 01:11:46,160 | INFO     | job 6840531934 has state=finished
[2025-10-12 21:12:32] 2025-10-13 01:11:46,165 | INFO     | preparing for final server update for job 6840531934 in state='finished'
[2025-10-12 21:12:32] 2025-10-13 01:11:46,166 | INFO     | this job has now completed (state=finished)
[2025-10-12 21:12:32] 2025-10-13 01:11:46,166 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 21:12:32] 2025-10-13 01:11:46,166 | INFO     | log transfer has been attempted: DONE
[2025-10-12 21:12:32] 2025-10-13 01:11:46,167 | INFO     | job 6840531934 has finished - writing final server update
[2025-10-12 21:12:32] 2025-10-13 01:11:46,167 | INFO     | total number of processed events: 400 (read)
[2025-10-12 21:12:32] 2025-10-13 01:11:46,169 | INFO     | executing command: lscpu
[2025-10-12 21:12:32] 2025-10-13 01:11:46,196 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 21:12:32] 2025-10-13 01:11:46,267 | WARNING  | process 8178 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 21:12:32] 2025-10-13 01:11:46,268 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840531934/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:12:32] 2025-10-13 01:11:46,358 | INFO     | number of running child processes to parent process 8178: 1
[2025-10-12 21:12:32] 2025-10-13 01:11:46,358 | INFO     | maximum number of monitored processes: 6
[2025-10-12 21:12:32] 2025-10-13 01:11:46,425 | INFO     | time since job start (4407s) is within the limit (172800.0s)
[2025-10-12 21:12:32] 2025-10-13 01:11:48,430 | INFO     | time since job start (4409s) is within the limit (172800.0s)
[2025-10-12 21:12:32] 2025-10-13 01:11:48,861 | INFO     | monitor loop #328: job 0:6840531934 is in state 'finished'
[2025-10-12 21:12:32] 2025-10-13 01:11:48,861 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:12:32] 2025-10-13 01:11:50,436 | INFO     | time since job start (4411s) is within the limit (172800.0s)
[2025-10-12 21:12:32] 2025-10-13 01:11:50,880 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 21:12:32] 2025-10-13 01:11:50,884 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-10-12 21:12:32] 2025-10-13 01:11:50,886 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840531934/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:12:32] 2025-10-13 01:11:50,887 | INFO     | extracted standard info from prmon json
[2025-10-12 21:12:32] 2025-10-13 01:11:50,887 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 21:12:32] 2025-10-13 01:11:50,887 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:12:32] 2025-10-13 01:11:50,887 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:12:32] 2025-10-13 01:11:50,888 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:12:32] 2025-10-13 01:11:50,889 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:12:32] 2025-10-13 01:11:50,889 | INFO     | sum of square deviations: 85136480.0
[2025-10-12 21:12:32] 2025-10-13 01:11:50,890 | INFO     | sum of deviations: -5630540340.0
[2025-10-12 21:12:32] 2025-10-13 01:11:50,890 | INFO     | mean x: 1760315785.0
[2025-10-12 21:12:32] 2025-10-13 01:11:50,890 | INFO     | mean y: 2745099.676923077
[2025-10-12 21:12:32] 2025-10-13 01:11:50,890 | INFO     | -- intersect: 116422040783.28125
[2025-10-12 21:12:32] 2025-10-13 01:11:50,890 | INFO     | intersect: 116422040783.28125
[2025-10-12 21:12:32] 2025-10-13 01:11:50,891 | INFO     | chi2: 0.05520704460803765
[2025-10-12 21:12:32] 2025-10-13 01:11:50,891 | INFO     | -- intersect: 116422040783.28125
[2025-10-12 21:12:32] 2025-10-13 01:11:50,891 | INFO     | current memory leak: -66.14 B/s (using 65 data points, chi2=0.06)
[2025-10-12 21:12:32] 2025-10-13 01:11:50,891 | INFO     | could have reported an average CPU frequency of 2036 MHz (6 samples)
[2025-10-12 21:12:32] 2025-10-13 01:11:50,891 | INFO     | ..............................
[2025-10-12 21:12:32] 2025-10-13 01:11:50,892 | INFO     | . Timing measurements:
[2025-10-12 21:12:32] 2025-10-13 01:11:50,892 | INFO     | . get job = 0 s
[2025-10-12 21:12:32] 2025-10-13 01:11:50,892 | INFO     | . initial setup = 2 s
[2025-10-12 21:12:32] 2025-10-13 01:11:50,892 | INFO     | . payload setup = 7 s
[2025-10-12 21:12:32] 2025-10-13 01:11:50,892 | INFO     | . stage-in = 0 s
[2025-10-12 21:12:32] 2025-10-13 01:11:50,892 | INFO     | . payload execution = 4375 s
[2025-10-12 21:12:32] 2025-10-13 01:11:50,892 | INFO     | . stage-out = 0 s
[2025-10-12 21:12:32] 2025-10-13 01:11:50,892 | INFO     | . log creation = 0 s
[2025-10-12 21:12:32] 2025-10-13 01:11:50,892 | INFO     | ..............................
[2025-10-12 21:12:32] 2025-10-13 01:11:51,242 | INFO     | 
[2025-10-12 21:12:32] 2025-10-13 01:11:51,243 | INFO     | job summary report
[2025-10-12 21:12:32] 2025-10-13 01:11:51,249 | INFO     | --------------------------------------------------
[2025-10-12 21:12:32] 2025-10-13 01:11:51,249 | INFO     | PanDA job id: 6840531934
[2025-10-12 21:12:32] 2025-10-13 01:11:51,249 | INFO     | task id: 46676269
[2025-10-12 21:12:32] 2025-10-13 01:11:51,249 | INFO     | errors: (none)
[2025-10-12 21:12:32] 2025-10-13 01:11:51,250 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:12:32] 2025-10-13 01:11:51,250 | INFO     | pilot state: finished 
[2025-10-12 21:12:32] 2025-10-13 01:11:51,250 | INFO     | transexitcode: 0
[2025-10-12 21:12:32] 2025-10-13 01:11:51,250 | INFO     | exeerrorcode: 0
[2025-10-12 21:12:32] 2025-10-13 01:11:51,250 | INFO     | exeerrordiag: 
[2025-10-12 21:12:32] 2025-10-13 01:11:51,250 | INFO     | exitcode: 0
[2025-10-12 21:12:32] 2025-10-13 01:11:51,251 | INFO     | exitmsg: OK
[2025-10-12 21:12:32] 2025-10-13 01:11:51,251 | INFO     | cpuconsumptiontime: 46913 s
[2025-10-12 21:12:32] 2025-10-13 01:11:51,251 | INFO     | nevents: 400
[2025-10-12 21:12:32] 2025-10-13 01:11:51,251 | INFO     | neventsw: 0
[2025-10-12 21:12:32] 2025-10-13 01:11:51,251 | INFO     | pid: 8178
[2025-10-12 21:12:32] 2025-10-13 01:11:51,251 | INFO     | pgrp: 8178
[2025-10-12 21:12:32] 2025-10-13 01:11:51,252 | INFO     | corecount: 12
[2025-10-12 21:12:32] 2025-10-13 01:11:51,252 | INFO     | event service: False
[2025-10-12 21:12:32] 2025-10-13 01:11:51,252 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 4385: 2375223, 4388: 2384405, 4395: 2384543}
[2025-10-12 21:12:32] 2025-10-13 01:11:51,252 | INFO     | --------------------------------------------------
[2025-10-12 21:12:32] 2025-10-13 01:11:51,252 | INFO     | 
[2025-10-12 21:12:32] 2025-10-13 01:11:51,252 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 21:12:32] 2025-10-13 01:11:51,300 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:12:32] 2025-10-13 01:11:51,300 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:12:32] 2025-10-13 01:11:51,300 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:12:32] 2025-10-13 01:11:51,301 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:12:32] 2025-10-13 01:11:51,301 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:12:32] 2025-10-13 01:11:51,301 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:12:32] 2025-10-13 01:11:51,301 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:12:32] 2025-10-13 01:11:51,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:12:32] 2025-10-13 01:11:51,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:12:32] 2025-10-13 01:11:51,302 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:12:32] 2025-10-13 01:11:51,302 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:12:32] 2025-10-13 01:11:51,302 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:12:32] 2025-10-13 01:11:51,302 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:12:32] 2025-10-13 01:11:51,302 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:12:32] 2025-10-13 01:11:51,302 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:12:32] 2025-10-13 01:11:51,303 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:12:32] 2025-10-13 01:11:51,303 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:12:32] 2025-10-13 01:11:51,303 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:12:32] 2025-10-13 01:11:51,303 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:12:32] 2025-10-13 01:11:51,303 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:12:32] 2025-10-13 01:11:51,303 | INFO     | job 6840531934 has completed (purged errors)
[2025-10-12 21:12:32] 2025-10-13 01:11:51,304 | INFO     | overall cleanup function is called
[2025-10-12 21:12:32] 2025-10-13 01:11:52,312 | INFO     | --- collectZombieJob: --- 10, [8178]
[2025-10-12 21:12:32] 2025-10-13 01:11:52,312 | INFO     | zombie collector waiting for pid 8178
[2025-10-12 21:12:32] 2025-10-13 01:11:52,312 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:12:32] 2025-10-13 01:11:52,312 | INFO     | collected zombie processes
[2025-10-12 21:12:32] 2025-10-13 01:11:52,312 | INFO     | will attempt to kill all subprocesses of pid=8178
[2025-10-12 21:12:32] 2025-10-13 01:11:52,404 | INFO     | process IDs to be killed: [8178] (in reverse order)
[2025-10-12 21:12:32] 2025-10-13 01:11:52,455 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:12:32] 2025-10-13 01:11:52,455 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:12:32] 2025-10-13 01:11:52,459 | INFO     | did not find any defunct processes belonging to 8178
[2025-10-12 21:12:32] 2025-10-13 01:11:52,462 | INFO     | did not find any defunct processes belonging to 8178
[2025-10-12 21:12:32] 2025-10-13 01:11:52,462 | INFO     | ready for new job
[2025-10-12 21:12:32] 2025-10-13 01:11:52,462 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:12:32] 2025-10-13 01:11:52,464 | INFO     | ***************************************
[2025-10-12 21:12:32] 2025-10-13 01:11:52,464 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:12:32] 2025-10-13 01:11:52,464 | INFO     | ***************************************
[2025-10-12 21:12:32] 2025-10-13 01:11:52,464 | INFO     | 
[2025-10-12 21:12:32] 2025-10-13 01:11:52,465 | INFO     | architecture information:
[2025-10-12 21:12:32] 2025-10-13 01:11:52,465 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:12:32] 2025-10-13 01:11:52,481 | INFO     | cat /etc/os-release:
[2025-10-12 21:12:32] NAME="CentOS Linux"
[2025-10-12 21:12:32] VERSION="7 (Core)"
[2025-10-12 21:12:32] ID="centos"
[2025-10-12 21:12:32] ID_LIKE="rhel fedora"
[2025-10-12 21:12:32] VERSION_ID="7"
[2025-10-12 21:12:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:12:32] ANSI_COLOR="0;31"
[2025-10-12 21:12:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:12:32] HOME_URL="https://www.centos.org/"
[2025-10-12 21:12:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:12:32] 
[2025-10-12 21:12:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:12:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:12:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:12:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:12:32] 
[2025-10-12 21:12:32] 2025-10-13 01:11:52,481 | INFO     | ***************************************
[2025-10-12 21:12:32] 2025-10-13 01:11:52,984 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 21:12:32] 2025-10-13 01:11:53,000 | INFO     | sufficient remaining disk space (29371662336 B)
[2025-10-12 21:12:32] 2025-10-13 01:11:53,001 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:12:32] 2025-10-13 01:11:53,001 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:12:32] 2025-10-13 01:11:53,001 | INFO     | update_server=False
[2025-10-12 21:12:32] 2025-10-13 01:11:53,001 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:12:32] 2025-10-13 01:11:53,002 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:12:32] 2025-10-13 01:11:53,002 | INFO     | aborting loop
[2025-10-12 21:12:32] 2025-10-13 01:11:53,379 | INFO     | all data control threads have been joined
[2025-10-12 21:12:32] 2025-10-13 01:11:53,474 | INFO     | all payload control threads have been joined
[2025-10-12 21:12:32] 2025-10-13 01:11:53,984 | INFO     | all job control threads have been joined
[2025-10-12 21:12:32] 2025-10-13 01:11:54,007 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:12:32] 2025-10-13 01:11:54,007 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:12:32] 2025-10-13 01:11:54,125 | INFO     | [job] validate thread has finished
[2025-10-12 21:12:32] 2025-10-13 01:11:54,204 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:12:32] 2025-10-13 01:11:54,283 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:12:32] 2025-10-13 01:11:54,317 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:12:32] 2025-10-13 01:11:54,384 | INFO     | [data] control thread has finished
[2025-10-12 21:12:32] 2025-10-13 01:11:54,457 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:12:32] 2025-10-13 01:11:54,480 | INFO     | [payload] control thread has finished
[2025-10-12 21:12:32] 2025-10-13 01:11:54,639 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:12:32] 2025-10-13 01:11:54,746 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:12:32] 2025-10-13 01:11:54,753 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:12:32] 2025-10-13 01:11:54,990 | INFO     | [job] control thread has finished
[2025-10-12 21:12:32] 2025-10-13 01:11:55,218 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:12:32] 2025-10-13 01:11:55,983 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:12:32] 2025-10-13 01:11:56,210 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:12:32] 2025-10-13 01:11:56,988 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:12:32] 2025-10-13 01:11:58,289 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:12:32] 2025-10-13 01:12:03,613 | INFO     | job.realtimelogging is not enabled
[2025-10-12 21:12:32] 2025-10-13 01:12:04,618 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:12:32] 2025-10-13 01:12:23,646 | INFO     | PID=1706 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 21:12:32] 2025-10-13 01:12:23,647 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:12:32] 2025-10-13 01:12:23,647 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:12:32] 2025-10-13 01:12:23,647 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:12:32] 2025-10-13 01:12:26,373 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:12:32] 2025-10-13 01:12:26,869 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139788286584640)>', '<ExcThread(monitor, started 139787386201856)>']
[2025-10-12 21:12:32] 2025-10-13 01:12:27,668 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:12:32] 2025-10-13 01:12:27,668 | INFO     | [monitor] control thread has ended
[2025-10-12 21:12:32] 2025-10-13 01:12:31,893 | INFO     | all workflow threads have been joined
[2025-10-12 21:12:32] 2025-10-13 01:12:31,893 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:12:32] 2025-10-13 01:12:31,893 | INFO     | traces error code: 0
[2025-10-12 21:12:32] 2025-10-13 01:12:31,894 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:12:32] 2025-10-13 01:12:31,991 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:12:32] 2025-10-13 01:12:31,995 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:12:32] 2025-10-13 01:12:31,999 [wrapper] pilotpid: 1706
[2025-10-12 21:12:32] 2025-10-13 01:12:32,003 [wrapper] Pilot exit status: 0
[2025-10-12 21:12:32] 2025-10-13 01:12:32,019 [wrapper] pandaids: 6840531934
[2025-10-12 21:12:32] 2025-10-13 01:12:32,058 [wrapper] cleanup supervisor_pilot 20988 1707
[2025-10-12 21:12:32] 2025-10-13 01:12:32,062 [wrapper] Test setup, not cleaning
[2025-10-12 21:12:32] 2025-10-13 01:12:32,066 [wrapper] apfmon messages muted
[2025-10-12 21:12:32] 2025-10-13 01:12:32,070 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:12:32] 2025-10-13 01:12:32,074 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:12:32]  *** Error codes and diagnostics ***
[2025-10-12 21:12:32]     "exeErrorCode": 0,
[2025-10-12 21:12:32]     "exeErrorDiag": "",
[2025-10-12 21:12:32]     "pilotErrorCode": 0,
[2025-10-12 21:12:32]     "pilotErrorDiag": "",
[2025-10-12 21:12:32]  *** Listing of results directory ***
[2025-10-12 21:12:32] total 406352
[2025-10-12 21:12:32] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 13:57 pilot3.tar.gz
[2025-10-12 21:12:32] -rwx------ 1 boincer umatlas     36292 Oct 12 14:17 runpilot2-wrapper.sh
[2025-10-12 21:12:32] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 14:17 queuedata.json
[2025-10-12 21:12:32] -rw-r--r-- 1 boincer umatlas       100 Oct 12 19:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:12:32] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 19:58 run_atlas
[2025-10-12 21:12:32] -rw-r--r-- 1 boincer umatlas       105 Oct 12 19:58 job.xml
[2025-10-12 21:12:32] -rw-r--r-- 2 boincer umatlas 218139583 Oct 12 19:58 EVNT.46676267._004398.pool.root.1
[2025-10-12 21:12:32] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 19:58 start_atlas.sh
[2025-10-12 21:12:32] drwxrwx--x 2 boincer umatlas      4096 Oct 12 19:58 shared
[2025-10-12 21:12:32] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 19:58 input.tar.gz
[2025-10-12 21:12:32] -rw-r--r-- 1 boincer umatlas         0 Oct 12 19:58 boinc_lockfile
[2025-10-12 21:12:32] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 19:58 pandaJob.out
[2025-10-12 21:12:32] -rw------- 1 boincer umatlas    975603 Oct 12 19:58 agis_schedconf.cvmfs.json
[2025-10-12 21:12:32] -rw------- 1 boincer umatlas   1560580 Oct 12 19:58 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:12:32] drwx------ 5 boincer umatlas      4096 Oct 12 19:58 pilot3
[2025-10-12 21:12:32] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 21:00 init_data.xml
[2025-10-12 21:12:32] -rw------- 1 boincer umatlas 192023020 Oct 12 21:11 HITS.46676269._085955.pool.root.1
[2025-10-12 21:12:32] -rw-r--r-- 1 boincer umatlas       529 Oct 12 21:11 boinc_task_state.xml
[2025-10-12 21:12:32] -rw------- 1 boincer umatlas      1050 Oct 12 21:11 memory_monitor_summary.json
[2025-10-12 21:12:32] -rw------- 1 boincer umatlas    379972 Oct 12 21:11 log.46676269._085955.job.log.tgz.1
[2025-10-12 21:12:32] -rw------- 1 boincer umatlas      7859 Oct 12 21:11 heartbeat.json
[2025-10-12 21:12:32] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 21:12 boinc_mmap_file
[2025-10-12 21:12:32] -rw-r--r-- 1 boincer umatlas        27 Oct 12 21:12 wrapper_checkpoint.txt
[2025-10-12 21:12:32] -rw------- 1 boincer umatlas        95 Oct 12 21:12 pilot_heartbeat.json
[2025-10-12 21:12:32] -rw------- 1 boincer umatlas      4817 Oct 12 21:12 pilotlog.txt
[2025-10-12 21:12:32] -rw------- 1 boincer umatlas    639598 Oct 12 21:12 log.46676269._085955.job.log.1
[2025-10-12 21:12:32] -rw------- 1 boincer umatlas       357 Oct 12 21:12 output.list
[2025-10-12 21:12:32] -rw-r--r-- 1 boincer umatlas       620 Oct 12 21:12 runtime_log
[2025-10-12 21:12:32] -rw------- 1 boincer umatlas   1034240 Oct 12 21:12 result.tar.gz
[2025-10-12 21:12:32] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 21:12 runtime_log.err
[2025-10-12 21:12:32] -rw------- 1 boincer umatlas       659 Oct 12 21:12 h9xLDmBoFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmq0kNDmIMyv8n.diag
[2025-10-12 21:12:32] -rw-r--r-- 1 boincer umatlas     21803 Oct 12 21:12 stderr.txt
[2025-10-12 21:12:32] HITS file was successfully produced:
[2025-10-12 21:12:32] -rw------- 1 boincer umatlas 192023020 Oct 12 21:11 shared/HITS.pool.root.1
[2025-10-12 21:12:32]  *** Contents of shared directory: ***
[2025-10-12 21:12:32] total 402148
[2025-10-12 21:12:32] -rw-r--r-- 2 boincer umatlas 218139583 Oct 12 19:58 ATLAS.root_0
[2025-10-12 21:12:32] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 19:58 start_atlas.sh
[2025-10-12 21:12:32] -rw-r--r-- 2 boincer umatlas    569682 Oct 12 19:58 input.tar.gz
[2025-10-12 21:12:32] -rw------- 1 boincer umatlas 192023020 Oct 12 21:11 HITS.pool.root.1
[2025-10-12 21:12:32] -rw------- 1 boincer umatlas   1034240 Oct 12 21:12 result.tar.gz
21:12:33 (30434): run_atlas exited; CPU time 46875.445628
21:12:33 (30434): called boinc_finish(0)

</stderr_txt>
]]>

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