Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:43:35 (2487898): wrapper (7.7.26015): starting
15:43:35 (2487898): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 15:43:35] Arguments: --nthreads 6
[2025-10-13 15:43:35] Threads: 6
[2025-10-13 15:43:35] Checking for CVMFS
[2025-10-13 15:43:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 15:43:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 15:43:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 15:43:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 15:43:35] 2.11.5.0 3102357 4917 91184 151652 2 187 42873861 52428801 861 130560 0 11175014 99.997 175187 15 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-10-13 15:43:35] CVMFS is ok
[2025-10-13 15:43:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 15:43:35] Checking for apptainer binary...
[2025-10-13 15:43:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 15:43:35] Running /usr/bin/apptainer --version
[2025-10-13 15:43:35] apptainer version 1.3.6-1.el9
[2025-10-13 15:43:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 15:43:35] testio002
[2025-10-13 15:43:35] apptainer works
[2025-10-13 15:43:35] Set ATHENA_PROC_NUMBER=6
[2025-10-13 15:43:35] Set ATHENA_CORE_NUMBER=6
[2025-10-13 15:43:35] Starting ATLAS job with PandaID=6840850758
[2025-10-13 15:43:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:59:05]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:59:05]  protocol_id=None
[2025-10-13 16:59:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 16:59:05]  replicas=None
[2025-10-13 16:59:05]  scope=mc23_13p6TeV
[2025-10-13 16:59:05]  status=None
[2025-10-13 16:59:05]  status_code=0
[2025-10-13 16:59:05]  storage_token=
[2025-10-13 16:59:05]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6840850758/log.46676269._090706.job.log.tgz.1
[2025-10-13 16:59:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/7a/log.46676269._090706.job.log.tgz.1
[2025-10-13 16:59:05]  workdir=None
[2025-10-13 16:59:05] ]
[2025-10-13 16:59:05] 2025-10-13 07:58:43,103 | INFO     | transferring file log.46676269._090706.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6840850758/log.46676269._090706.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 16:59:05] 2025-10-13 07:58:43,103 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6840850758/log.46676269._090706.job.log.tgz.1 /var/lib/boinc/slots/2/log.46676269._090706.job
[2025-10-13 16:59:05] 2025-10-13 07:58:43,108 | INFO     | adding to output.list: log.46676269._090706.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/7a/log.46676269._090706.job.log.tg
[2025-10-13 16:59:05] 2025-10-13 07:58:43,109 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 16:59:05] 2025-10-13 07:58:43,109 | INFO     | summary of transferred files:
[2025-10-13 16:59:05] 2025-10-13 07:58:43,109 | INFO     |  -- lfn=log.46676269._090706.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 16:59:05] 2025-10-13 07:58:43,109 | INFO     | stage-out finished correctly
[2025-10-13 16:59:05] 2025-10-13 07:58:43,136 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 16:59:05] 2025-10-13 07:58:43,172 | INFO     | job 6840850758 has state=finished
[2025-10-13 16:59:05] 2025-10-13 07:58:43,173 | INFO     | preparing for final server update for job 6840850758 in state='finished'
[2025-10-13 16:59:05] 2025-10-13 07:58:43,627 | INFO     | time since job start (4500s) is within the limit (172800.0s)
[2025-10-13 16:59:05] 2025-10-13 07:58:44,270 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-13 16:59:05] 2025-10-13 07:58:44,270 | INFO     | this job has now completed (state=finished)
[2025-10-13 16:59:05] 2025-10-13 07:58:44,270 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 16:59:05] 2025-10-13 07:58:44,270 | INFO     | log transfer has been attempted: DONE
[2025-10-13 16:59:05] 2025-10-13 07:58:44,270 | INFO     | job 6840850758 has finished - writing final server update
[2025-10-13 16:59:05] 2025-10-13 07:58:44,270 | INFO     | total number of processed events: 400 (read)
[2025-10-13 16:59:05] 2025-10-13 07:58:44,271 | INFO     | executing command: lscpu
[2025-10-13 16:59:05] 2025-10-13 07:58:44,278 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 16:59:05] 2025-10-13 07:58:45,632 | INFO     | time since job start (4502s) is within the limit (172800.0s)
[2025-10-13 16:59:05] 2025-10-13 07:58:45,674 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 16:59:05] 2025-10-13 07:58:45,674 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4249.3835625
[2025-10-13 16:59:05] 2025-10-13 07:58:45,675 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6840850758/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 16:59:05] 2025-10-13 07:58:45,676 | INFO     | extracted standard info from prmon json
[2025-10-13 16:59:05] 2025-10-13 07:58:45,676 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 16:59:05] 2025-10-13 07:58:45,676 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 16:59:05] 2025-10-13 07:58:45,676 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 16:59:05] 2025-10-13 07:58:45,676 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 16:59:05] 2025-10-13 07:58:45,676 | INFO     | fitting pss+swap vs Time
[2025-10-13 16:59:05] 2025-10-13 07:58:45,676 | INFO     | sum of square deviations: 93240818.0
[2025-10-13 16:59:05] 2025-10-13 07:58:45,677 | INFO     | sum of deviations: -3691454040.0000005
[2025-10-13 16:59:05] 2025-10-13 07:58:45,677 | INFO     | mean x: 1760340157.0
[2025-10-13 16:59:05] 2025-10-13 07:58:45,677 | INFO     | mean y: 2497804.447761194
[2025-10-13 16:59:05] 2025-10-13 07:58:45,677 | INFO     | -- intersect: 69695309640.69617
[2025-10-13 16:59:05] 2025-10-13 07:58:45,677 | INFO     | intersect: 69695309640.69617
[2025-10-13 16:59:05] 2025-10-13 07:58:45,677 | INFO     | chi2: 0.04719437714651619
[2025-10-13 16:59:05] 2025-10-13 07:58:45,677 | INFO     | -- intersect: 69695309640.69617
[2025-10-13 16:59:05] 2025-10-13 07:58:45,677 | INFO     | current memory leak: -39.59 B/s (using 67 data points, chi2=0.05)
[2025-10-13 16:59:05] 2025-10-13 07:58:45,677 | INFO     | could have reported an average CPU frequency of 4182 MHz (6 samples)
[2025-10-13 16:59:05] 2025-10-13 07:58:45,677 | INFO     | ..............................
[2025-10-13 16:59:05] 2025-10-13 07:58:45,677 | INFO     | . Timing measurements:
[2025-10-13 16:59:05] 2025-10-13 07:58:45,677 | INFO     | . get job = 0 s
[2025-10-13 16:59:05] 2025-10-13 07:58:45,677 | INFO     | . initial setup = 4 s
[2025-10-13 16:59:05] 2025-10-13 07:58:45,677 | INFO     | . payload setup = 1 s
[2025-10-13 16:59:05] 2025-10-13 07:58:45,677 | INFO     | . stage-in = 0 s
[2025-10-13 16:59:05] 2025-10-13 07:58:45,677 | INFO     | . payload execution = 4482 s
[2025-10-13 16:59:05] 2025-10-13 07:58:45,677 | INFO     | . stage-out = 0 s
[2025-10-13 16:59:05] 2025-10-13 07:58:45,677 | INFO     | . log creation = 0 s
[2025-10-13 16:59:05] 2025-10-13 07:58:45,677 | INFO     | ..............................
[2025-10-13 16:59:05] 2025-10-13 07:58:45,704 | INFO     | 
[2025-10-13 16:59:05] 2025-10-13 07:58:45,704 | INFO     | job summary report
[2025-10-13 16:59:05] 2025-10-13 07:58:45,704 | INFO     | --------------------------------------------------
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | PanDA job id: 6840850758
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | task id: 46676269
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | errors: (none)
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | pilot state: finished 
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | transexitcode: 0
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | exeerrorcode: 0
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | exeerrordiag: 
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | exitcode: 0
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | exitmsg: OK
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | cpuconsumptiontime: 24497 s
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | nevents: 400
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | neventsw: 0
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | pid: 2498511
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | pgrp: 2498511
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | corecount: 6
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | event service: False
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | sizes: {0: 2348857, 1: 2349119, 11: 2349147, 4487: 2375359, 4488: 2384413, 4490: 2384551}
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | --------------------------------------------------
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | 
[2025-10-13 16:59:05] 2025-10-13 07:58:45,705 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | job 6840850758 has completed (purged errors)
[2025-10-13 16:59:05] 2025-10-13 07:58:45,712 | INFO     | overall cleanup function is called
[2025-10-13 16:59:05] 2025-10-13 07:58:46,718 | INFO     | --- collectZombieJob: --- 10, [2498511]
[2025-10-13 16:59:05] 2025-10-13 07:58:46,718 | INFO     | zombie collector waiting for pid 2498511
[2025-10-13 16:59:05] 2025-10-13 07:58:46,718 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 16:59:05] 2025-10-13 07:58:46,718 | INFO     | collected zombie processes
[2025-10-13 16:59:05] 2025-10-13 07:58:46,718 | INFO     | will attempt to kill all subprocesses of pid=2498511
[2025-10-13 16:59:05] 2025-10-13 07:58:46,749 | INFO     | process IDs to be killed: [2498511] (in reverse order)
[2025-10-13 16:59:05] 2025-10-13 07:58:46,763 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 16:59:05] 2025-10-13 07:58:46,763 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 16:59:05] 2025-10-13 07:58:46,764 | INFO     | did not find any defunct processes belonging to 2498511
[2025-10-13 16:59:05] 2025-10-13 07:58:46,765 | INFO     | did not find any defunct processes belonging to 2498511
[2025-10-13 16:59:05] 2025-10-13 07:58:46,765 | INFO     | ready for new job
[2025-10-13 16:59:05] 2025-10-13 07:58:46,766 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 16:59:05] 2025-10-13 07:58:46,766 | INFO     | ***************************************
[2025-10-13 16:59:05] 2025-10-13 07:58:46,766 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 16:59:05] 2025-10-13 07:58:46,766 | INFO     | ***************************************
[2025-10-13 16:59:05] 2025-10-13 07:58:46,766 | INFO     | 
[2025-10-13 16:59:05] 2025-10-13 07:58:46,766 | INFO     | architecture information:
[2025-10-13 16:59:05] 2025-10-13 07:58:46,767 | INFO     | executing command: cat /etc/os-release
[2025-10-13 16:59:05] 2025-10-13 07:58:46,771 | INFO     | cat /etc/os-release:
[2025-10-13 16:59:05] NAME="CentOS Linux"
[2025-10-13 16:59:05] VERSION="7 (Core)"
[2025-10-13 16:59:05] ID="centos"
[2025-10-13 16:59:05] ID_LIKE="rhel fedora"
[2025-10-13 16:59:05] VERSION_ID="7"
[2025-10-13 16:59:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 16:59:05] ANSI_COLOR="0;31"
[2025-10-13 16:59:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 16:59:05] HOME_URL="https://www.centos.org/"
[2025-10-13 16:59:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 16:59:05] 
[2025-10-13 16:59:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 16:59:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 16:59:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 16:59:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 16:59:05] 
[2025-10-13 16:59:05] 2025-10-13 07:58:46,771 | INFO     | ***************************************
[2025-10-13 16:59:05] 2025-10-13 07:58:47,274 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-13 16:59:05] 2025-10-13 07:58:47,279 | INFO     | sufficient remaining disk space (301511737344 B)
[2025-10-13 16:59:05] 2025-10-13 07:58:47,279 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 16:59:05] 2025-10-13 07:58:47,279 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 16:59:05] 2025-10-13 07:58:47,279 | INFO     | update_server=False
[2025-10-13 16:59:05] 2025-10-13 07:58:47,279 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 16:59:05] 2025-10-13 07:58:47,279 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 16:59:05] 2025-10-13 07:58:47,279 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:59:05] 2025-10-13 07:58:47,279 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:59:05] 2025-10-13 07:58:47,280 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:59:05] 2025-10-13 07:58:47,280 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:59:05] 2025-10-13 07:58:47,379 | INFO     | all data control threads have been joined
[2025-10-13 16:59:05] 2025-10-13 07:58:47,466 | INFO     | all payload control threads have been joined
[2025-10-13 16:59:05] 2025-10-13 07:58:48,284 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:59:05] 2025-10-13 07:58:48,284 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:59:05] 2025-10-13 07:58:48,384 | INFO     | [data] control thread has finished
[2025-10-13 16:59:05] 2025-10-13 07:58:48,446 | INFO     | all job control threads have been joined
[2025-10-13 16:59:05] 2025-10-13 07:58:48,471 | INFO     | [payload] control thread has finished
[2025-10-13 16:59:05] 2025-10-13 07:58:48,636 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:59:05] 2025-10-13 07:58:48,643 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 16:59:05] 2025-10-13 07:58:48,742 | WARNING  | process 2498511 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 16:59:05] 2025-10-13 07:58:48,766 | INFO     | using path: /var/lib/boinc/slots/2/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 16:59:05] 2025-10-13 07:58:48,798 | INFO     | number of running child processes to parent process 2498511: 1
[2025-10-13 16:59:05] 2025-10-13 07:58:48,798 | INFO     | maximum number of monitored processes: 6
[2025-10-13 16:59:05] 2025-10-13 07:58:48,798 | INFO     | aborting job monitoring since job object (job id=6840850758) has expired
[2025-10-13 16:59:05] 2025-10-13 07:58:48,798 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:59:05] 2025-10-13 07:58:48,798 | INFO     | will abort loop
[2025-10-13 16:59:05] 2025-10-13 07:58:48,866 | INFO     | [job] validate thread has finished
[2025-10-13 16:59:05] 2025-10-13 07:58:48,917 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:59:05] 2025-10-13 07:58:48,922 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:59:05] 2025-10-13 07:58:49,035 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:59:05] 2025-10-13 07:58:49,178 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:59:05] 2025-10-13 07:58:49,394 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:59:05] 2025-10-13 07:58:49,451 | INFO     | [job] control thread has finished
[2025-10-13 16:59:05] 2025-10-13 07:58:49,689 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:59:05] 2025-10-13 07:58:49,803 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:59:05] 2025-10-13 07:58:49,917 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:59:05] 2025-10-13 07:58:50,648 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:59:05] 2025-10-13 07:58:53,183 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:59:05] 2025-10-13 07:58:57,464 | INFO     | job.realtimelogging is not enabled
[2025-10-13 16:59:05] 2025-10-13 07:58:58,469 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:59:05] 2025-10-13 07:59:00,156 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140309860116288)>', '<ExcThread(monitor, started 140309375731456)>']
[2025-10-13 16:59:05] 2025-10-13 07:59:00,341 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:59:05] 2025-10-13 07:59:00,341 | INFO     | [monitor] control thread has ended
[2025-10-13 16:59:05] 2025-10-13 07:59:05,159 | INFO     | all workflow threads have been joined
[2025-10-13 16:59:05] 2025-10-13 07:59:05,159 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:59:05] 2025-10-13 07:59:05,159 | INFO     | traces error code: 0
[2025-10-13 16:59:05] 2025-10-13 07:59:05,159 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:59:05] 2025-10-13 07:59:05,200 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:59:05] 2025-10-13 07:59:05,201 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:59:05] 2025-10-13 07:59:05,202 [wrapper] pilotpid: 2491712
[2025-10-13 16:59:05] 2025-10-13 07:59:05,203 [wrapper] Pilot exit status: 0
[2025-10-13 16:59:05] 2025-10-13 07:59:05,205 [wrapper] pandaids: 6840850758
[2025-10-13 16:59:05] 2025-10-13 07:59:05,213 [wrapper] cleanup supervisor_pilot 2534769 2491713
[2025-10-13 16:59:05] 2025-10-13 07:59:05,214 [wrapper] Test setup, not cleaning
[2025-10-13 16:59:05] 2025-10-13 07:59:05,215 [wrapper] apfmon messages muted
[2025-10-13 16:59:05] 2025-10-13 07:59:05,215 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:59:05] 2025-10-13 07:59:05,216 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:59:05]  *** Error codes and diagnostics ***
[2025-10-13 16:59:05]     "exeErrorCode": 0,
[2025-10-13 16:59:05]     "exeErrorDiag": "",
[2025-10-13 16:59:05]     "pilotErrorCode": 0,
[2025-10-13 16:59:05]     "pilotErrorDiag": "",
[2025-10-13 16:59:05]  *** Listing of results directory ***
[2025-10-13 16:59:05] total 411820
[2025-10-13 16:59:05] -rw-r--r--. 1 boinc boinc    557409 Oct 13 06:57 pilot3.tar.gz
[2025-10-13 16:59:05] -rw-r--r--. 1 boinc boinc      5112 Oct 13 07:06 queuedata.json
[2025-10-13 16:59:05] -rwx------. 1 boinc boinc     36292 Oct 13 07:08 runpilot2-wrapper.sh
[2025-10-13 16:59:05] -rw-r--r--. 1 boinc boinc       100 Oct 13 15:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:59:05] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 15:43 run_atlas
[2025-10-13 16:59:05] -rw-r--r--. 1 boinc boinc       105 Oct 13 15:43 job.xml
[2025-10-13 16:59:05] -rw-r--r--. 2 boinc boinc 223297019 Oct 13 15:43 EVNT.46676267._004296.pool.root.1
[2025-10-13 16:59:05] -rw-r--r--. 2 boinc boinc     15120 Oct 13 15:43 start_atlas.sh
[2025-10-13 16:59:05] drwxrwx--x. 2 boinc boinc        68 Oct 13 15:43 shared
[2025-10-13 16:59:05] -rw-r--r--. 2 boinc boinc    569682 Oct 13 15:43 input.tar.gz
[2025-10-13 16:59:05] -rw-r--r--. 1 boinc boinc      9628 Oct 13 15:43 init_data.xml
[2025-10-13 16:59:05] -rw-r--r--. 1 boinc boinc         0 Oct 13 15:43 boinc_lockfile
[2025-10-13 16:59:05] -rw-r--r--. 1 boinc boinc      2550 Oct 13 15:43 pandaJob.out
[2025-10-13 16:59:05] -rw-------. 1 boinc boinc    972849 Oct 13 15:43 agis_schedconf.cvmfs.json
[2025-10-13 16:59:05] -rw-------. 1 boinc boinc   1560580 Oct 13 15:43 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:59:05] drwx------. 5 boinc boinc      4096 Oct 13 15:43 pilot3
[2025-10-13 16:59:05] -rw-------. 1 boinc boinc        95 Oct 13 16:58 pilot_heartbeat.json
[2025-10-13 16:59:05] -rw-------. 1 boinc boinc 192605528 Oct 13 16:58 HITS.46676269._090706.pool.root.1
[2025-10-13 16:59:05] -rw-r--r--. 1 boinc boinc       530 Oct 13 16:58 boinc_task_state.xml
[2025-10-13 16:59:05] -rw-------. 1 boinc boinc      1029 Oct 13 16:58 memory_monitor_summary.json
[2025-10-13 16:59:05] -rw-------. 1 boinc boinc    281237 Oct 13 16:58 log.46676269._090706.job.log.tgz.1
[2025-10-13 16:59:05] -rw-------. 1 boinc boinc      7795 Oct 13 16:58 heartbeat.json
[2025-10-13 16:59:05] -rw-r--r--. 1 boinc boinc      8192 Oct 13 16:58 boinc_mmap_file
[2025-10-13 16:59:05] -rw-r--r--. 1 boinc boinc        27 Oct 13 16:58 wrapper_checkpoint.txt
[2025-10-13 16:59:05] -rw-------. 1 boinc boinc      5146 Oct 13 16:59 pilotlog.txt
[2025-10-13 16:59:05] -rw-------. 1 boinc boinc    675864 Oct 13 16:59 log.46676269._090706.job.log.1
[2025-10-13 16:59:05] -rw-------. 1 boinc boinc       357 Oct 13 16:59 output.list
[2025-10-13 16:59:05] -rw-r--r--. 1 boinc boinc       620 Oct 13 16:59 runtime_log
[2025-10-13 16:59:05] -rw-------. 1 boinc boinc    972800 Oct 13 16:59 result.tar.gz
[2025-10-13 16:59:05] -rw-------. 1 boinc boinc       642 Oct 13 16:59 XIlNDmdPJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmk8UMDmzmVFdn.diag
[2025-10-13 16:59:05] -rw-r--r--. 1 boinc boinc      8661 Oct 13 16:59 runtime_log.err
[2025-10-13 16:59:05] -rw-r--r--. 1 boinc boinc     21360 Oct 13 16:59 stderr.txt
[2025-10-13 16:59:05] HITS file was successfully produced:
[2025-10-13 16:59:05] -rw-------. 1 boinc boinc 192605528 Oct 13 16:58 shared/HITS.pool.root.1
[2025-10-13 16:59:05]  *** Contents of shared directory: ***
[2025-10-13 16:59:05] total 407684
[2025-10-13 16:59:05] -rw-r--r--. 2 boinc boinc 223297019 Oct 13 15:43 ATLAS.root_0
[2025-10-13 16:59:05] -rw-r--r--. 2 boinc boinc     15120 Oct 13 15:43 start_atlas.sh
[2025-10-13 16:59:05] -rw-r--r--. 2 boinc boinc    569682 Oct 13 15:43 input.tar.gz
[2025-10-13 16:59:05] -rw-------. 1 boinc boinc 192605528 Oct 13 16:58 HITS.pool.root.1
[2025-10-13 16:59:05] -rw-------. 1 boinc boinc    972800 Oct 13 16:59 result.tar.gz
16:59:06 (2487898): run_atlas exited; CPU time 24519.754712
16:59:06 (2487898): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN