Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
19:55:34 (2724225): wrapper (7.7.26015): starting
19:55:34 (2724225): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 19:55:34] Arguments: --nthreads 4
[2025-10-12 19:55:34] Threads: 4
[2025-10-12 19:55:34] Checking for CVMFS
[2025-10-12 19:55:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:55:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:55:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:55:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:55:34] 2.13.2.0 3732220 7261 61788 151641 0 188 2721257 4096001 11983 130560 0 50590001 99.999 379838 1280 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 19:55:34] CVMFS is ok
[2025-10-12 19:55:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:55:34] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 19:55:34] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 19:55:34] Further information can be found at the LHC@home message board.
[2025-10-12 19:55:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:55:34] Checking for apptainer binary...
[2025-10-12 19:55:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:55:34] Running /usr/bin/apptainer --version
[2025-10-12 19:55:34] apptainer version 1.4.3
[2025-10-12 19:55:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:55:34] T7810-Ubuntu
[2025-10-12 19:55:34] apptainer works
[2025-10-12 19:55:34] Set ATHENA_PROC_NUMBER=4
[2025-10-12 19:55:34] Set ATHENA_CORE_NUMBER=4
[2025-10-12 19:55:34] Starting ATLAS job with PandaID=6840850778
[2025-10-12 19:55:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:29:22]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:29:22] 2025-10-13 03:28:49,316 | INFO     | sum of deviations: 32015738736.000004
[2025-10-12 23:29:22] 2025-10-13 03:28:49,316 | INFO     | mean x: 1760319719.0
[2025-10-12 23:29:22] 2025-10-13 03:28:49,316 | INFO     | mean y: 2287656.6172248805
[2025-10-12 23:29:22] 2025-10-13 03:28:49,317 | INFO     | -- intersect: -19906634174.226276
[2025-10-12 23:29:22] 2025-10-13 03:28:49,317 | INFO     | intersect: -19906634174.226276
[2025-10-12 23:29:22] 2025-10-13 03:28:49,317 | INFO     | chi2: 1.485660431457341
[2025-10-12 23:29:22] 2025-10-13 03:28:49,318 | INFO     | sum of square deviations: 2632440055.0
[2025-10-12 23:29:22] 2025-10-13 03:28:49,319 | INFO     | sum of deviations: 31018536691.500004
[2025-10-12 23:29:22] 2025-10-13 03:28:49,319 | INFO     | mean x: 1760319566.5
[2025-10-12 23:29:22] 2025-10-13 03:28:49,319 | INFO     | mean y: 2286889.7892156863
[2025-10-12 23:29:22] 2025-10-13 03:28:49,320 | INFO     | -- intersect: -20739889920.100433
[2025-10-12 23:29:22] 2025-10-13 03:28:49,320 | INFO     | intersect: -20739889920.100433
[2025-10-12 23:29:22] 2025-10-13 03:28:49,320 | INFO     | chi2: 1.486469716740471
[2025-10-12 23:29:22] 2025-10-13 03:28:49,320 | INFO     | current chi2=1.486469716740471 (change=-0.05447309937010364 %)
[2025-10-12 23:29:22] 2025-10-13 03:28:49,320 | INFO     | right removable region: 203
[2025-10-12 23:29:22] 2025-10-13 03:28:49,321 | INFO     | sum of square deviations: 2632440055.0
[2025-10-12 23:29:22] 2025-10-13 03:28:49,322 | INFO     | sum of deviations: 1986559611.0000002
[2025-10-12 23:29:22] 2025-10-13 03:28:49,323 | INFO     | mean x: 1760319871.5
[2025-10-12 23:29:22] 2025-10-13 03:28:49,323 | INFO     | mean y: 2310498.6666666665
[2025-10-12 23:29:22] 2025-10-13 03:28:49,323 | INFO     | -- intersect: -1326107351.7305422
[2025-10-12 23:29:22] 2025-10-13 03:28:49,323 | INFO     | intersect: -1326107351.7305422
[2025-10-12 23:29:22] 2025-10-13 03:28:49,323 | INFO     | chi2: 0.007786738110739125
[2025-10-12 23:29:22] 2025-10-13 03:28:49,324 | INFO     | current chi2=0.007786738110739125 (change=99.47587362859892 %)
[2025-10-12 23:29:22] 2025-10-13 03:28:49,324 | INFO     | sum of square deviations: 2443580700.0
[2025-10-12 23:29:22] 2025-10-13 03:28:49,325 | INFO     | sum of deviations: 1108849277.0000002
[2025-10-12 23:29:22] 2025-10-13 03:28:49,326 | INFO     | mean x: 1760320024.0
[2025-10-12 23:29:22] 2025-10-13 03:28:49,326 | INFO     | mean y: 2311191.773869347
[2025-10-12 23:29:22] 2025-10-13 03:28:49,326 | INFO     | -- intersect: -796487712.5966812
[2025-10-12 23:29:22] 2025-10-13 03:28:49,326 | INFO     | intersect: -796487712.5966812
[2025-10-12 23:29:22] 2025-10-13 03:28:49,326 | INFO     | chi2: 0.004198019204933408
[2025-10-12 23:29:22] 2025-10-13 03:28:49,327 | INFO     | current chi2=0.004198019204933408 (change=46.087576784639964 %)
[2025-10-12 23:29:22] 2025-10-13 03:28:49,327 | INFO     | sum of square deviations: 2263977332.5
[2025-10-12 23:29:22] 2025-10-13 03:28:49,328 | INFO     | sum of deviations: 1707512548.9999998
[2025-10-12 23:29:22] 2025-10-13 03:28:49,329 | INFO     | mean x: 1760320176.5
[2025-10-12 23:29:22] 2025-10-13 03:28:49,329 | INFO     | mean y: 2310681.494845361
[2025-10-12 23:29:22] 2025-10-13 03:28:49,329 | INFO     | -- intersect: -1325339003.1919358
[2025-10-12 23:29:22] 2025-10-13 03:28:49,329 | INFO     | intersect: -1325339003.1919358
[2025-10-12 23:29:22] 2025-10-13 03:28:49,329 | INFO     | chi2: 0.003653016850146552
[2025-10-12 23:29:22] 2025-10-13 03:28:49,330 | INFO     | current chi2=0.003653016850146552 (change=12.982369259921029 %)
[2025-10-12 23:29:22] 2025-10-13 03:28:49,330 | INFO     | left removable region: 30
[2025-10-12 23:29:22] 2025-10-13 03:28:49,330 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 23:29:22] 2025-10-13 03:28:49,332 | INFO     | sum of deviations: 2998796844.0
[2025-10-12 23:29:22] 2025-10-13 03:28:49,332 | INFO     | mean x: 1760320451.0
[2025-10-12 23:29:22] 2025-10-13 03:28:49,332 | INFO     | mean y: 2308895.9826589595
[2025-10-12 23:29:22] 2025-10-13 03:28:49,332 | INFO     | -- intersect: -3285727054.553813
[2025-10-12 23:29:22] 2025-10-13 03:28:49,332 | INFO     | intersect: -3285727054.553813
[2025-10-12 23:29:22] 2025-10-13 03:28:49,333 | INFO     | chi2: 0.00019379680104573125
[2025-10-12 23:29:22] 2025-10-13 03:28:49,333 | INFO     | -- intersect: -3285727054.553813
[2025-10-12 23:29:22] 2025-10-13 03:28:49,333 | INFO     | current memory leak: 1.87 B/s (using 173 data points, chi2=0.00)
[2025-10-12 23:29:22] 2025-10-13 03:28:49,334 | INFO     | could have reported an average CPU frequency of 2674 MHz (11 samples)
[2025-10-12 23:29:22] 2025-10-13 03:28:49,334 | INFO     | ..............................
[2025-10-12 23:29:22] 2025-10-13 03:28:49,334 | INFO     | . Timing measurements:
[2025-10-12 23:29:22] 2025-10-13 03:28:49,334 | INFO     | . get job = 0 s
[2025-10-12 23:29:22] 2025-10-13 03:28:49,334 | INFO     | . initial setup = 3 s
[2025-10-12 23:29:22] 2025-10-13 03:28:49,335 | INFO     | . payload setup = 6 s
[2025-10-12 23:29:22] 2025-10-13 03:28:49,335 | INFO     | . stage-in = 0 s
[2025-10-12 23:29:22] 2025-10-13 03:28:49,335 | INFO     | . payload execution = 12743 s
[2025-10-12 23:29:22] 2025-10-13 03:28:49,335 | INFO     | . stage-out = 3 s
[2025-10-12 23:29:22] 2025-10-13 03:28:49,335 | INFO     | . log creation = 0 s
[2025-10-12 23:29:22] 2025-10-13 03:28:49,335 | INFO     | ..............................
[2025-10-12 23:29:22] 2025-10-13 03:28:49,606 | INFO     | PID=2729432 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 23:29:22] 2025-10-13 03:28:49,606 | INFO     | .. there are 14 such processes running
[2025-10-12 23:29:22] 2025-10-13 03:28:49,942 | INFO     | 
[2025-10-12 23:29:22] 2025-10-13 03:28:49,942 | INFO     | job summary report
[2025-10-12 23:29:22] 2025-10-13 03:28:49,943 | INFO     | --------------------------------------------------
[2025-10-12 23:29:22] 2025-10-13 03:28:49,943 | INFO     | PanDA job id: 6840850778
[2025-10-12 23:29:22] 2025-10-13 03:28:49,943 | INFO     | task id: 46676269
[2025-10-12 23:29:22] 2025-10-13 03:28:49,943 | INFO     | errors: (none)
[2025-10-12 23:29:22] 2025-10-13 03:28:49,943 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:29:22] 2025-10-13 03:28:49,943 | INFO     | pilot state: finished 
[2025-10-12 23:29:22] 2025-10-13 03:28:49,943 | INFO     | transexitcode: 0
[2025-10-12 23:29:22] 2025-10-13 03:28:49,943 | INFO     | exeerrorcode: 0
[2025-10-12 23:29:22] 2025-10-13 03:28:49,943 | INFO     | exeerrordiag: 
[2025-10-12 23:29:22] 2025-10-13 03:28:49,944 | INFO     | exitcode: 0
[2025-10-12 23:29:22] 2025-10-13 03:28:49,944 | INFO     | exitmsg: OK
[2025-10-12 23:29:22] 2025-10-13 03:28:49,944 | INFO     | cpuconsumptiontime: 49633 s
[2025-10-12 23:29:22] 2025-10-13 03:28:49,944 | INFO     | nevents: 400
[2025-10-12 23:29:22] 2025-10-13 03:28:49,944 | INFO     | neventsw: 0
[2025-10-12 23:29:22] 2025-10-13 03:28:49,944 | INFO     | pid: 2737421
[2025-10-12 23:29:22] 2025-10-13 03:28:49,944 | INFO     | pgrp: 2737421
[2025-10-12 23:29:22] 2025-10-13 03:28:49,944 | INFO     | corecount: 4
[2025-10-12 23:29:22] 2025-10-13 03:28:49,944 | INFO     | event service: False
[2025-10-12 23:29:22] 2025-10-13 03:28:49,945 | INFO     | sizes: {0: 2348758, 1: 2348900, 5: 2349162, 11: 2349218, 12753: 2379199, 12757: 2388227, 12758: 2388411, 12765: 2388605}
[2025-10-12 23:29:22] 2025-10-13 03:28:49,945 | INFO     | --------------------------------------------------
[2025-10-12 23:29:22] 2025-10-13 03:28:49,945 | INFO     | 
[2025-10-12 23:29:22] 2025-10-13 03:28:49,945 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/24
[2025-10-12 23:29:22] 2025-10-13 03:28:49,969 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:29:22] 2025-10-13 03:28:49,969 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:29:22] 2025-10-13 03:28:49,970 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:29:22] 2025-10-13 03:28:49,970 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:29:22] 2025-10-13 03:28:49,970 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:29:22] 2025-10-13 03:28:49,970 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:29:22] 2025-10-13 03:28:49,970 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:29:22] 2025-10-13 03:28:49,970 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:29:22] 2025-10-13 03:28:49,970 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:29:22] 2025-10-13 03:28:49,970 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:29:22] 2025-10-13 03:28:49,971 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:29:22] 2025-10-13 03:28:49,971 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:29:22] 2025-10-13 03:28:49,971 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:29:22] 2025-10-13 03:28:49,971 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:29:22] 2025-10-13 03:28:49,971 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:29:22] 2025-10-13 03:28:49,971 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:29:22] 2025-10-13 03:28:49,971 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:29:22] 2025-10-13 03:28:49,971 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:29:22] 2025-10-13 03:28:49,971 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:29:22] 2025-10-13 03:28:49,972 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:29:22] 2025-10-13 03:28:49,972 | INFO     | job 6840850778 has completed (purged errors)
[2025-10-12 23:29:22] 2025-10-13 03:28:49,972 | INFO     | overall cleanup function is called
[2025-10-12 23:29:22] 2025-10-13 03:28:50,981 | INFO     | --- collectZombieJob: --- 10, [2737421]
[2025-10-12 23:29:22] 2025-10-13 03:28:50,981 | INFO     | zombie collector waiting for pid 2737421
[2025-10-12 23:29:22] 2025-10-13 03:28:50,981 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:29:22] 2025-10-13 03:28:50,981 | INFO     | collected zombie processes
[2025-10-12 23:29:22] 2025-10-13 03:28:50,981 | INFO     | will attempt to kill all subprocesses of pid=2737421
[2025-10-12 23:29:22] 2025-10-13 03:28:51,486 | INFO     | process IDs to be killed: [2737421] (in reverse order)
[2025-10-12 23:29:22] 2025-10-13 03:28:51,602 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:29:22] 2025-10-13 03:28:51,603 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:29:22] 2025-10-13 03:28:51,616 | INFO     | did not find any defunct processes belonging to 2737421
[2025-10-12 23:29:22] 2025-10-13 03:28:51,626 | INFO     | did not find any defunct processes belonging to 2737421
[2025-10-12 23:29:22] 2025-10-13 03:28:51,626 | INFO     | ready for new job
[2025-10-12 23:29:22] 2025-10-13 03:28:51,626 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:29:22] 2025-10-13 03:28:51,628 | INFO     | ***************************************
[2025-10-12 23:29:22] 2025-10-13 03:28:51,629 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:29:22] 2025-10-13 03:28:51,629 | INFO     | ***************************************
[2025-10-12 23:29:22] 2025-10-13 03:28:51,629 | INFO     | 
[2025-10-12 23:29:22] 2025-10-13 03:28:51,632 | INFO     | architecture information:
[2025-10-12 23:29:22] 2025-10-13 03:28:51,633 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:29:22] 2025-10-13 03:28:51,651 | INFO     | cat /etc/os-release:
[2025-10-12 23:29:22] NAME="CentOS Linux"
[2025-10-12 23:29:22] VERSION="7 (Core)"
[2025-10-12 23:29:22] ID="centos"
[2025-10-12 23:29:22] ID_LIKE="rhel fedora"
[2025-10-12 23:29:22] VERSION_ID="7"
[2025-10-12 23:29:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:29:22] ANSI_COLOR="0;31"
[2025-10-12 23:29:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:29:22] HOME_URL="https://www.centos.org/"
[2025-10-12 23:29:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:29:22] 
[2025-10-12 23:29:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:29:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:29:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:29:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:29:22] 
[2025-10-12 23:29:22] 2025-10-13 03:28:51,651 | INFO     | ***************************************
[2025-10-12 23:29:22] 2025-10-13 03:28:52,154 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/24
[2025-10-12 23:29:22] 2025-10-13 03:28:52,172 | INFO     | sufficient remaining disk space (399717171200 B)
[2025-10-12 23:29:22] 2025-10-13 03:28:52,172 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:29:22] 2025-10-13 03:28:52,173 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:29:22] 2025-10-13 03:28:52,173 | INFO     | update_server=False
[2025-10-12 23:29:22] 2025-10-13 03:28:52,173 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:29:22] 2025-10-13 03:28:52,173 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:29:22] 2025-10-13 03:28:52,317 | INFO     | all payload control threads have been joined
[2025-10-12 23:29:22] 2025-10-13 03:28:52,411 | INFO     | all job control threads have been joined
[2025-10-12 23:29:22] 2025-10-13 03:28:52,445 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 23:29:22] 2025-10-13 03:28:52,445 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 23:29:22] 2025-10-13 03:28:52,445 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:29:22] 2025-10-13 03:28:52,446 | INFO     | will abort loop
[2025-10-12 23:29:22] 2025-10-13 03:28:52,478 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:29:22] 2025-10-13 03:28:53,015 | INFO     | all data control threads have been joined
[2025-10-12 23:29:22] 2025-10-13 03:28:53,174 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:29:22] 2025-10-13 03:28:53,322 | INFO     | [payload] control thread has finished
[2025-10-12 23:29:22] 2025-10-13 03:28:53,383 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:29:22] 2025-10-13 03:28:53,416 | INFO     | [job] control thread has finished
[2025-10-12 23:29:22] 2025-10-13 03:28:53,451 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:29:22] 2025-10-13 03:28:53,895 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:29:22] 2025-10-13 03:28:53,926 | INFO     | [job] validate thread has finished
[2025-10-12 23:29:22] 2025-10-13 03:28:54,020 | INFO     | [data] control thread has finished
[2025-10-12 23:29:22] 2025-10-13 03:28:54,178 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:29:22] 2025-10-13 03:28:54,192 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:29:22] 2025-10-13 03:28:54,291 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:29:22] 2025-10-13 03:28:54,315 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:29:22] 2025-10-13 03:28:54,357 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:29:22] 2025-10-13 03:28:54,453 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:29:22] 2025-10-13 03:28:55,459 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:29:22] 2025-10-13 03:28:56,484 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:29:22] 2025-10-13 03:29:03,087 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:29:22] 2025-10-13 03:29:04,092 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:29:22] 2025-10-13 03:29:08,360 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:29:22] 2025-10-13 03:29:10,092 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135629879150400)>', '<ExcThread(monitor, started 135629094516480)>']
[2025-10-12 23:29:22] 2025-10-13 03:29:15,117 | INFO     | all workflow threads have been joined
[2025-10-12 23:29:22] 2025-10-13 03:29:15,118 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:29:22] 2025-10-13 03:29:15,118 | INFO     | traces error code: 0
[2025-10-12 23:29:22] 2025-10-13 03:29:15,118 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:29:22] 2025-10-13 03:29:22,198 | INFO     | PID=2729432 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:29:22] 2025-10-13 03:29:22,199 | INFO     | .. there are 14 such processes running
[2025-10-12 23:29:22] 2025-10-13 03:29:22,199 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:29:22] 2025-10-13 03:29:22,199 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:29:22] 2025-10-13 03:29:22,199 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:29:22] 2025-10-13 03:29:22,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:29:22] 2025-10-13 03:29:22,199 | INFO     | [monitor] control thread has ended
[2025-10-12 23:29:22] 2025-10-13 03:29:22,313 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:29:22] 2025-10-13 03:29:22,317 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:29:22] 2025-10-13 03:29:22,320 [wrapper] pilotpid: 2729432
[2025-10-12 23:29:22] 2025-10-13 03:29:22,322 [wrapper] Pilot exit status: 0
[2025-10-12 23:29:22] 2025-10-13 03:29:22,334 [wrapper] pandaids: 6840850778
[2025-10-12 23:29:22] 2025-10-13 03:29:22,412 [wrapper] cleanup supervisor_pilot 3279689 2729434
[2025-10-12 23:29:22] 2025-10-13 03:29:22,415 [wrapper] Test setup, not cleaning
[2025-10-12 23:29:22] 2025-10-13 03:29:22,420 [wrapper] apfmon messages muted
[2025-10-12 23:29:22] 2025-10-13 03:29:22,423 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:29:22] 2025-10-13 03:29:22,426 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:29:22]  *** Error codes and diagnostics ***
[2025-10-12 23:29:22]     "exeErrorCode": 0,
[2025-10-12 23:29:22]     "exeErrorDiag": "",
[2025-10-12 23:29:22]     "pilotErrorCode": 0,
[2025-10-12 23:29:22]     "pilotErrorDiag": "",
[2025-10-12 23:29:22]  *** Listing of results directory ***
[2025-10-12 23:29:22] total 415580
[2025-10-12 23:29:22] -rw-r--r-- 1 whitlerd whitlerd    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-12 23:29:22] -rw-r--r-- 1 whitlerd whitlerd      5112 Oct 12 18:06 queuedata.json
[2025-10-12 23:29:22] -rwx------ 1 whitlerd whitlerd     36292 Oct 12 18:07 runpilot2-wrapper.sh
[2025-10-12 23:29:22] -rw-rw-r-- 1 whitlerd whitlerd       100 Oct 12 19:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:29:22] -rwxr-xr-x 1 whitlerd whitlerd      7986 Oct 12 19:55 run_atlas
[2025-10-12 23:29:22] -rw-rw-r-- 1 whitlerd whitlerd       105 Oct 12 19:55 job.xml
[2025-10-12 23:29:22] -rw-r--r-- 2 whitlerd whitlerd 223297019 Oct 12 19:55 EVNT.46676267._004296.pool.root.1
[2025-10-12 23:29:22] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 12 19:55 start_atlas.sh
[2025-10-12 23:29:22] drwxrwx--x 2 whitlerd whitlerd      4096 Oct 12 19:55 shared
[2025-10-12 23:29:22] -rw-r--r-- 2 whitlerd whitlerd    569680 Oct 12 19:55 input.tar.gz
[2025-10-12 23:29:22] -rw-rw-r-- 1 whitlerd whitlerd      8957 Oct 12 19:55 init_data.xml
[2025-10-12 23:29:22] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 12 19:55 boinc_setup_complete
[2025-10-12 23:29:22] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 12 19:55 boinc_lockfile
[2025-10-12 23:29:22] -rw-rw-r-- 1 whitlerd whitlerd      2550 Oct 12 19:55 pandaJob.out
[2025-10-12 23:29:22] -rw------- 1 whitlerd whitlerd    975603 Oct 12 19:55 agis_schedconf.cvmfs.json
[2025-10-12 23:29:22] drwx------ 5 whitlerd whitlerd      4096 Oct 12 19:55 pilot3
[2025-10-12 23:29:22] -rw------- 1 whitlerd whitlerd 193939891 Oct 12 23:28 HITS.46676269._090726.pool.root.1
[2025-10-12 23:29:22] -rw-rw-r-- 1 whitlerd whitlerd       531 Oct 12 23:28 boinc_task_state.xml
[2025-10-12 23:29:22] -rw------- 1 whitlerd whitlerd      1033 Oct 12 23:28 memory_monitor_summary.json
[2025-10-12 23:29:22] -rw------- 1 whitlerd whitlerd        95 Oct 12 23:28 pilot_heartbeat.json
[2025-10-12 23:29:22] -rw------- 1 whitlerd whitlerd   1560580 Oct 12 23:28 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:29:22] -rw------- 1 whitlerd whitlerd    397984 Oct 12 23:28 log.46676269._090726.job.log.tgz.1
[2025-10-12 23:29:22] -rw------- 1 whitlerd whitlerd      7787 Oct 12 23:28 heartbeat.json
[2025-10-12 23:29:22] -rw-rw-r-- 1 whitlerd whitlerd      8192 Oct 12 23:29 boinc_mmap_file
[2025-10-12 23:29:22] -rw-rw-r-- 1 whitlerd whitlerd        28 Oct 12 23:29 wrapper_checkpoint.txt
[2025-10-12 23:29:22] -rw------- 1 whitlerd whitlerd       823 Oct 12 23:29 pilotlog.txt
[2025-10-12 23:29:22] -rw------- 1 whitlerd whitlerd   1808231 Oct 12 23:29 log.46676269._090726.job.log.1
[2025-10-12 23:29:22] -rw------- 1 whitlerd whitlerd       357 Oct 12 23:29 output.list
[2025-10-12 23:29:22] -rw-rw-r-- 1 whitlerd whitlerd       620 Oct 12 23:29 runtime_log
[2025-10-12 23:29:22] -rw------- 1 whitlerd whitlerd   2222080 Oct 12 23:29 result.tar.gz
[2025-10-12 23:29:22] -rw------- 1 whitlerd whitlerd       650 Oct 12 23:29 CO2MDmfOJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDma8UMDmFJ3ZZm.diag
[2025-10-12 23:29:22] -rw-rw-r-- 1 whitlerd whitlerd      8893 Oct 12 23:29 runtime_log.err
[2025-10-12 23:29:22] -rw-rw-r-- 1 whitlerd whitlerd     21195 Oct 12 23:29 stderr.txt
[2025-10-12 23:29:22] HITS file was successfully produced:
[2025-10-12 23:29:22] -rw------- 1 whitlerd whitlerd 193939891 Oct 12 23:28 shared/HITS.pool.root.1
[2025-10-12 23:29:22]  *** Contents of shared directory: ***
[2025-10-12 23:29:22] total 410216
[2025-10-12 23:29:22] -rw-r--r-- 2 whitlerd whitlerd 223297019 Oct 12 19:55 ATLAS.root_0
[2025-10-12 23:29:22] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 12 19:55 start_atlas.sh
[2025-10-12 23:29:22] -rw-r--r-- 2 whitlerd whitlerd    569680 Oct 12 19:55 input.tar.gz
[2025-10-12 23:29:22] -rw------- 1 whitlerd whitlerd 193939891 Oct 12 23:28 HITS.pool.root.1
[2025-10-12 23:29:22] -rw------- 1 whitlerd whitlerd   2222080 Oct 12 23:29 result.tar.gz
23:29:24 (2724225): run_atlas exited; CPU time 50262.196488
23:29:24 (2724225): called boinc_finish(0)

</stderr_txt>
]]>

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