Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:13:03 (3828937): wrapper (7.7.26015): starting
20:13:03 (3828937): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 20:13:03] Arguments: --nthreads 8
[2025-10-12 20:13:03] Threads: 8
[2025-10-12 20:13:03] Checking for CVMFS
[2025-10-12 20:13:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:13:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:13:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:13:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:13:05] 2.13.2.0 2956151 129949 464196 151641 1 846 27567375 32935936 59359 16776704 0 876325825 99.729 604656020 33094 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 20:13:05] CVMFS is ok
[2025-10-12 20:13:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:13:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:13:05] Further information can be found at the LHC@home message board.
[2025-10-12 20:13:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:13:05] Checking for apptainer binary...
[2025-10-12 20:13:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:13:05] Running /usr/bin/apptainer --version
[2025-10-12 20:13:05] apptainer version 1.4.3-1.el9
[2025-10-12 20:13:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:13:06] c7-9-15.aglt2.org
[2025-10-12 20:13:06] apptainer works
[2025-10-12 20:13:06] Set ATHENA_PROC_NUMBER=8
[2025-10-12 20:13:06] Set ATHENA_CORE_NUMBER=8
[2025-10-12 20:13:06] Starting ATLAS job with PandaID=6840530416
[2025-10-12 20:13:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:47:23]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:47:23] 2025-10-13 01:46:22,440 | INFO     | job 6840530416 has state=finished
[2025-10-12 21:47:23] 2025-10-13 01:46:22,440 | INFO     | preparing for final server update for job 6840530416 in state='finished'
[2025-10-12 21:47:23] 2025-10-13 01:46:22,441 | INFO     | this job has now completed (state=finished)
[2025-10-12 21:47:23] 2025-10-13 01:46:22,441 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 21:47:23] 2025-10-13 01:46:22,441 | INFO     | log transfer has been attempted: DONE
[2025-10-12 21:47:23] 2025-10-13 01:46:22,441 | INFO     | job 6840530416 has finished - writing final server update
[2025-10-12 21:47:23] 2025-10-13 01:46:22,441 | INFO     | total number of processed events: 400 (read)
[2025-10-12 21:47:23] 2025-10-13 01:46:22,441 | INFO     | executing command: lscpu
[2025-10-12 21:47:23] 2025-10-13 01:46:22,563 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 21:47:23] 2025-10-13 01:46:22,978 | INFO     | time since job start (5505s) is within the limit (172800.0s)
[2025-10-12 21:47:23] 2025-10-13 01:46:23,380 | INFO     | monitor loop #343: job 0:6840530416 is in state 'finished'
[2025-10-12 21:47:23] 2025-10-13 01:46:23,380 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:47:23] 2025-10-13 01:46:24,985 | INFO     | time since job start (5507s) is within the limit (172800.0s)
[2025-10-12 21:47:23] 2025-10-13 01:46:25,885 | INFO     | monitor loop #344: job 0:6840530416 is in state 'finished'
[2025-10-12 21:47:23] 2025-10-13 01:46:25,885 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:47:23] 2025-10-13 01:46:26,993 | INFO     | time since job start (5509s) is within the limit (172800.0s)
[2025-10-12 21:47:23] 2025-10-13 01:46:28,398 | INFO     | monitor loop #345: job 0:6840530416 is in state 'finished'
[2025-10-12 21:47:23] 2025-10-13 01:46:28,398 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:47:23] 2025-10-13 01:46:29,001 | INFO     | time since job start (5512s) is within the limit (172800.0s)
[2025-10-12 21:47:23] 2025-10-13 01:46:30,929 | INFO     | monitor loop #346: job 0:6840530416 is in state 'finished'
[2025-10-12 21:47:23] 2025-10-13 01:46:30,929 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:47:23] 2025-10-13 01:46:31,012 | INFO     | time since job start (5514s) is within the limit (172800.0s)
[2025-10-12 21:47:23] 2025-10-13 01:46:33,019 | INFO     | time since job start (5516s) is within the limit (172800.0s)
[2025-10-12 21:47:23] 2025-10-13 01:46:33,436 | INFO     | monitor loop #347: job 0:6840530416 is in state 'finished'
[2025-10-12 21:47:23] 2025-10-13 01:46:33,436 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:47:23] 2025-10-13 01:46:35,051 | INFO     | time since job start (5518s) is within the limit (172800.0s)
[2025-10-12 21:47:23] 2025-10-13 01:46:35,952 | INFO     | monitor loop #348: job 0:6840530416 is in state 'finished'
[2025-10-12 21:47:23] 2025-10-13 01:46:35,952 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:47:23] 2025-10-13 01:46:38,072 | INFO     | PID=3838659 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:47:23] 2025-10-13 01:46:38,072 | INFO     | .. there are 83 such processes running
[2025-10-12 21:47:23] 2025-10-13 01:46:38,484 | INFO     | monitor loop #349: job 0:6840530416 is in state 'finished'
[2025-10-12 21:47:23] 2025-10-13 01:46:38,484 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 21:47:23] 2025-10-13 01:46:39,074 | INFO     | time since job start (5522s) is within the limit (172800.0s)
[2025-10-12 21:47:23] 2025-10-13 01:46:40,671 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 21:47:23] 2025-10-13 01:46:40,676 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9889296874962
[2025-10-12 21:47:23] 2025-10-13 01:46:40,688 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6840530416/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 21:47:23] 2025-10-13 01:46:40,689 | INFO     | extracted standard info from prmon json
[2025-10-12 21:47:23] 2025-10-13 01:46:40,689 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 21:47:23] 2025-10-13 01:46:40,689 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 21:47:23] 2025-10-13 01:46:40,690 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 21:47:23] 2025-10-13 01:46:40,690 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 21:47:23] 2025-10-13 01:46:40,691 | INFO     | fitting pss+swap vs Time
[2025-10-12 21:47:23] 2025-10-13 01:46:40,691 | INFO     | sum of square deviations: 164770406.91358048
[2025-10-12 21:47:23] 2025-10-13 01:46:40,691 | INFO     | sum of deviations: -557501586.9012349
[2025-10-12 21:47:23] 2025-10-13 01:46:40,691 | INFO     | mean x: 1760317396.1604939
[2025-10-12 21:47:23] 2025-10-13 01:46:40,691 | INFO     | mean y: 2224952.5308641978
[2025-10-12 21:47:23] 2025-10-13 01:46:40,691 | INFO     | -- intersect: 5958268638.968098
[2025-10-12 21:47:23] 2025-10-13 01:46:40,691 | INFO     | intersect: 5958268638.968098
[2025-10-12 21:47:23] 2025-10-13 01:46:40,691 | INFO     | chi2: 0.31256948671748597
[2025-10-12 21:47:23] 2025-10-13 01:46:40,692 | INFO     | -- intersect: 5958268638.968098
[2025-10-12 21:47:23] 2025-10-13 01:46:40,692 | INFO     | current memory leak: -3.38 B/s (using 81 data points, chi2=0.31)
[2025-10-12 21:47:23] 2025-10-13 01:46:40,692 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2025-10-12 21:47:23] 2025-10-13 01:46:40,692 | INFO     | ..............................
[2025-10-12 21:47:23] 2025-10-13 01:46:40,692 | INFO     | . Timing measurements:
[2025-10-12 21:47:23] 2025-10-13 01:46:40,692 | INFO     | . get job = 0 s
[2025-10-12 21:47:23] 2025-10-13 01:46:40,692 | INFO     | . initial setup = 8 s
[2025-10-12 21:47:23] 2025-10-13 01:46:40,692 | INFO     | . payload setup = 53 s
[2025-10-12 21:47:23] 2025-10-13 01:46:40,692 | INFO     | . stage-in = 0 s
[2025-10-12 21:47:23] 2025-10-13 01:46:40,692 | INFO     | . payload execution = 5361 s
[2025-10-12 21:47:23] 2025-10-13 01:46:40,692 | INFO     | . stage-out = 1 s
[2025-10-12 21:47:23] 2025-10-13 01:46:40,692 | INFO     | . log creation = 0 s
[2025-10-12 21:47:23] 2025-10-13 01:46:40,692 | INFO     | ..............................
[2025-10-12 21:47:23] 2025-10-13 01:46:40,745 | INFO     | 
[2025-10-12 21:47:23] 2025-10-13 01:46:40,745 | INFO     | job summary report
[2025-10-12 21:47:23] 2025-10-13 01:46:40,745 | INFO     | --------------------------------------------------
[2025-10-12 21:47:23] 2025-10-13 01:46:40,745 | INFO     | PanDA job id: 6840530416
[2025-10-12 21:47:23] 2025-10-13 01:46:40,745 | INFO     | task id: 46676269
[2025-10-12 21:47:23] 2025-10-13 01:46:40,745 | INFO     | errors: (none)
[2025-10-12 21:47:23] 2025-10-13 01:46:40,745 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 21:47:23] 2025-10-13 01:46:40,745 | INFO     | pilot state: finished 
[2025-10-12 21:47:23] 2025-10-13 01:46:40,745 | INFO     | transexitcode: 0
[2025-10-12 21:47:23] 2025-10-13 01:46:40,745 | INFO     | exeerrorcode: 0
[2025-10-12 21:47:23] 2025-10-13 01:46:40,745 | INFO     | exeerrordiag: 
[2025-10-12 21:47:23] 2025-10-13 01:46:40,746 | INFO     | exitcode: 0
[2025-10-12 21:47:23] 2025-10-13 01:46:40,746 | INFO     | exitmsg: OK
[2025-10-12 21:47:23] 2025-10-13 01:46:40,746 | INFO     | cpuconsumptiontime: 23223 s
[2025-10-12 21:47:23] 2025-10-13 01:46:40,746 | INFO     | nevents: 400
[2025-10-12 21:47:23] 2025-10-13 01:46:40,746 | INFO     | neventsw: 0
[2025-10-12 21:47:23] 2025-10-13 01:46:40,746 | INFO     | pid: 3868819
[2025-10-12 21:47:23] 2025-10-13 01:46:40,746 | INFO     | pgrp: 3868819
[2025-10-12 21:47:23] 2025-10-13 01:46:40,746 | INFO     | corecount: 8
[2025-10-12 21:47:23] 2025-10-13 01:46:40,746 | INFO     | event service: False
[2025-10-12 21:47:23] 2025-10-13 01:46:40,746 | INFO     | sizes: {0: 2347977, 1: 2348833, 2: 2348833, 12: 2348861, 23: 2348889, 34: 2348917, 39: 2349335, 45: 2349363, 5419: 2375942, 5422: 2384996, 5441: 2384964}
[2025-10-12 21:47:23] 2025-10-13 01:46:40,746 | INFO     | --------------------------------------------------
[2025-10-12 21:47:23] 2025-10-13 01:46:40,746 | INFO     | 
[2025-10-12 21:47:23] 2025-10-13 01:46:40,746 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-12 21:47:23] 2025-10-13 01:46:40,889 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 21:47:23] 2025-10-13 01:46:40,889 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 21:47:23] 2025-10-13 01:46:40,889 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 21:47:23] 2025-10-13 01:46:40,889 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 21:47:23] 2025-10-13 01:46:40,889 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 21:47:23] 2025-10-13 01:46:40,889 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 21:47:23] 2025-10-13 01:46:40,890 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 21:47:23] 2025-10-13 01:46:40,890 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 21:47:23] 2025-10-13 01:46:40,890 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 21:47:23] 2025-10-13 01:46:40,890 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 21:47:23] 2025-10-13 01:46:40,890 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 21:47:23] 2025-10-13 01:46:40,890 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 21:47:23] 2025-10-13 01:46:40,890 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 21:47:23] 2025-10-13 01:46:40,890 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 21:47:23] 2025-10-13 01:46:40,890 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 21:47:23] 2025-10-13 01:46:40,890 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 21:47:23] 2025-10-13 01:46:40,890 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 21:47:23] 2025-10-13 01:46:40,890 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 21:47:23] 2025-10-13 01:46:40,890 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 21:47:23] 2025-10-13 01:46:40,890 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 21:47:23] 2025-10-13 01:46:40,890 | INFO     | job 6840530416 has completed (purged errors)
[2025-10-12 21:47:23] 2025-10-13 01:46:40,890 | INFO     | overall cleanup function is called
[2025-10-12 21:47:23] 2025-10-13 01:46:41,909 | INFO     | --- collectZombieJob: --- 10, [3868819]
[2025-10-12 21:47:23] 2025-10-13 01:46:41,909 | INFO     | zombie collector waiting for pid 3868819
[2025-10-12 21:47:23] 2025-10-13 01:46:41,909 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 21:47:23] 2025-10-13 01:46:41,909 | INFO     | collected zombie processes
[2025-10-12 21:47:23] 2025-10-13 01:46:41,909 | INFO     | will attempt to kill all subprocesses of pid=3868819
[2025-10-12 21:47:23] 2025-10-13 01:46:44,624 | INFO     | process IDs to be killed: [3868819] (in reverse order)
[2025-10-12 21:47:23] 2025-10-13 01:46:45,075 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 21:47:23] 2025-10-13 01:46:45,075 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 21:47:23] 2025-10-13 01:46:45,135 | INFO     | did not find any defunct processes belonging to 3868819
[2025-10-12 21:47:23] 2025-10-13 01:46:45,196 | INFO     | did not find any defunct processes belonging to 3868819
[2025-10-12 21:47:23] 2025-10-13 01:46:45,197 | INFO     | ready for new job
[2025-10-12 21:47:23] 2025-10-13 01:46:45,197 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 21:47:23] 2025-10-13 01:46:45,202 | INFO     | ***************************************
[2025-10-12 21:47:23] 2025-10-13 01:46:45,202 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 21:47:23] 2025-10-13 01:46:45,202 | INFO     | ***************************************
[2025-10-12 21:47:23] 2025-10-13 01:46:45,202 | INFO     | 
[2025-10-12 21:47:23] 2025-10-13 01:46:45,210 | INFO     | architecture information:
[2025-10-12 21:47:23] 2025-10-13 01:46:45,212 | INFO     | executing command: cat /etc/os-release
[2025-10-12 21:47:23] 2025-10-13 01:46:45,299 | INFO     | cat /etc/os-release:
[2025-10-12 21:47:23] NAME="CentOS Linux"
[2025-10-12 21:47:23] VERSION="7 (Core)"
[2025-10-12 21:47:23] ID="centos"
[2025-10-12 21:47:23] ID_LIKE="rhel fedora"
[2025-10-12 21:47:23] VERSION_ID="7"
[2025-10-12 21:47:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 21:47:23] ANSI_COLOR="0;31"
[2025-10-12 21:47:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 21:47:23] HOME_URL="https://www.centos.org/"
[2025-10-12 21:47:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 21:47:23] 
[2025-10-12 21:47:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 21:47:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 21:47:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 21:47:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 21:47:23] 
[2025-10-12 21:47:23] 2025-10-13 01:46:45,299 | INFO     | ***************************************
[2025-10-12 21:47:23] 2025-10-13 01:46:45,818 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-12 21:47:23] 2025-10-13 01:46:45,897 | INFO     | sufficient remaining disk space (72658976768 B)
[2025-10-12 21:47:23] 2025-10-13 01:46:45,897 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 21:47:23] 2025-10-13 01:46:45,897 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 21:47:23] 2025-10-13 01:46:45,897 | INFO     | update_server=False
[2025-10-12 21:47:23] 2025-10-13 01:46:45,898 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 21:47:23] 2025-10-13 01:46:45,898 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:47:23] 2025-10-13 01:46:45,997 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:47:23] 2025-10-13 01:46:46,099 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 21:47:23] 2025-10-13 01:46:46,099 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 21:47:23] 2025-10-13 01:46:46,099 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 21:47:23] 2025-10-13 01:46:46,099 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 21:47:23] 2025-10-13 01:46:46,099 | INFO     | will abort loop
[2025-10-12 21:47:23] 2025-10-13 01:46:46,159 | INFO     | all payload control threads have been joined
[2025-10-12 21:47:23] 2025-10-13 01:46:46,369 | INFO     | all job control threads have been joined
[2025-10-12 21:47:23] 2025-10-13 01:46:46,913 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:47:23] 2025-10-13 01:46:46,913 | INFO     | [job] queue monitor thread has finished
[2025-10-12 21:47:23] 2025-10-13 01:46:47,031 | INFO     | all data control threads have been joined
[2025-10-12 21:47:23] 2025-10-13 01:46:47,118 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:47:23] 2025-10-13 01:46:47,167 | INFO     | [payload] control thread has finished
[2025-10-12 21:47:23] 2025-10-13 01:46:47,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:47:23] 2025-10-13 01:46:47,375 | INFO     | [job] control thread has finished
[2025-10-12 21:47:23] 2025-10-13 01:46:47,433 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:47:23] 2025-10-13 01:46:47,435 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:47:23] 2025-10-13 01:46:47,741 | INFO     | [job] validate thread has finished
[2025-10-12 21:47:23] 2025-10-13 01:46:47,765 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:47:23] 2025-10-13 01:46:47,819 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:47:23] 2025-10-13 01:46:48,038 | INFO     | [data] control thread has finished
[2025-10-12 21:47:23] 2025-10-13 01:46:48,220 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:47:23] 2025-10-13 01:46:48,260 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:47:23] 2025-10-13 01:46:49,332 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:47:23] 2025-10-13 01:46:50,118 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:47:23] 2025-10-13 01:46:56,721 | INFO     | job.realtimelogging is not enabled
[2025-10-12 21:47:23] 2025-10-13 01:46:57,726 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:47:23] 2025-10-13 01:46:58,665 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747259782976)>', '<ExcThread(monitor, started 139746617583360)>']
[2025-10-12 21:47:23] 2025-10-13 01:47:03,693 | INFO     | all workflow threads have been joined
[2025-10-12 21:47:23] 2025-10-13 01:47:03,693 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:47:23] 2025-10-13 01:47:03,693 | INFO     | traces error code: 0
[2025-10-12 21:47:23] 2025-10-13 01:47:03,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:47:23] 2025-10-13 01:47:19,174 | INFO     | PID=3838659 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:47:23] 2025-10-13 01:47:19,174 | INFO     | .. there are 83 such processes running
[2025-10-12 21:47:23] 2025-10-13 01:47:19,175 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:47:23] 2025-10-13 01:47:19,175 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:47:23] 2025-10-13 01:47:19,175 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:47:23] 2025-10-13 01:47:19,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:47:23] 2025-10-13 01:47:19,175 | INFO     | [monitor] control thread has ended
[2025-10-12 21:47:23] 2025-10-13 01:47:21,392 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:47:23] 2025-10-13 01:47:21,459 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:47:23] 2025-10-13 01:47:21,490 [wrapper] pilotpid: 3838659
[2025-10-12 21:47:23] 2025-10-13 01:47:21,510 [wrapper] Pilot exit status: 0
[2025-10-12 21:47:23] 2025-10-13 01:47:21,625 [wrapper] pandaids: 6840530416
[2025-10-12 21:47:23] 2025-10-13 01:47:22,192 [wrapper] cleanup supervisor_pilot  831798 3838660
[2025-10-12 21:47:23] 2025-10-13 01:47:22,278 [wrapper] Test setup, not cleaning
[2025-10-12 21:47:23] 2025-10-13 01:47:22,316 [wrapper] apfmon messages muted
[2025-10-12 21:47:23] 2025-10-13 01:47:22,366 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:47:23] 2025-10-13 01:47:22,415 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:47:23]  *** Error codes and diagnostics ***
[2025-10-12 21:47:23]     "exeErrorCode": 0,
[2025-10-12 21:47:23]     "exeErrorDiag": "",
[2025-10-12 21:47:23]     "pilotErrorCode": 0,
[2025-10-12 21:47:23]     "pilotErrorDiag": "",
[2025-10-12 21:47:23]  *** Listing of results directory ***
[2025-10-12 21:47:23] total 411516
[2025-10-12 21:47:23] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 13:32 pilot3.tar.gz
[2025-10-12 21:47:23] -rwx------. 1 boincer umatlas     36292 Oct 12 13:50 runpilot2-wrapper.sh
[2025-10-12 21:47:23] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 13:50 queuedata.json
[2025-10-12 21:47:23] -rw-r--r--. 1 boincer umatlas       100 Oct 12 20:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:47:23] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 20:13 run_atlas
[2025-10-12 21:47:23] -rw-r--r--. 1 boincer umatlas       105 Oct 12 20:13 job.xml
[2025-10-12 21:47:23] -rw-r--r--. 2 boincer umatlas 220723472 Oct 12 20:13 EVNT.46676267._001919.pool.root.1
[2025-10-12 21:47:23] -rw-r--r--. 2 boincer umatlas    569684 Oct 12 20:13 input.tar.gz
[2025-10-12 21:47:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:13 start_atlas.sh
[2025-10-12 21:47:23] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 20:13 shared
[2025-10-12 21:47:23] -rw-r--r--. 1 boincer umatlas         0 Oct 12 20:13 boinc_lockfile
[2025-10-12 21:47:23] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 20:13 pandaJob.out
[2025-10-12 21:47:23] -rw-------. 1 boincer umatlas    975603 Oct 12 20:14 agis_schedconf.cvmfs.json
[2025-10-12 21:47:23] -rw-------. 1 boincer umatlas   1560580 Oct 12 20:14 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:47:23] drwx------. 5 boincer umatlas      4096 Oct 12 20:14 pilot3
[2025-10-12 21:47:23] -rw-r--r--. 1 boincer umatlas       529 Oct 12 21:45 boinc_task_state.xml
[2025-10-12 21:47:23] -rw-------. 1 boincer umatlas 194715526 Oct 12 21:45 HITS.46676269._085342.pool.root.1
[2025-10-12 21:47:23] -rw-r--r--. 1 boincer umatlas      7161 Oct 12 21:46 init_data.xml
[2025-10-12 21:47:23] -rw-------. 1 boincer umatlas      1038 Oct 12 21:46 memory_monitor_summary.json
[2025-10-12 21:47:23] -rw-------. 1 boincer umatlas    319748 Oct 12 21:46 log.46676269._085342.job.log.tgz.1
[2025-10-12 21:47:23] -rw-------. 1 boincer umatlas        95 Oct 12 21:46 pilot_heartbeat.json
[2025-10-12 21:47:23] -rw-------. 1 boincer umatlas      7794 Oct 12 21:46 heartbeat.json
[2025-10-12 21:47:23] -rw-r--r--. 1 boincer umatlas        27 Oct 12 21:47 wrapper_checkpoint.txt
[2025-10-12 21:47:23] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 21:47 boinc_mmap_file
[2025-10-12 21:47:23] -rw-------. 1 boincer umatlas       823 Oct 12 21:47 pilotlog.txt
[2025-10-12 21:47:23] -rw-------. 1 boincer umatlas    708186 Oct 12 21:47 log.46676269._085342.job.log.1
[2025-10-12 21:47:23] -rw-------. 1 boincer umatlas       357 Oct 12 21:47 output.list
[2025-10-12 21:47:23] -rw-r--r--. 1 boincer umatlas       620 Oct 12 21:47 runtime_log
[2025-10-12 21:47:23] -rw-------. 1 boincer umatlas   1044480 Oct 12 21:47 result.tar.gz
[2025-10-12 21:47:23] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 21:47 runtime_log.err
[2025-10-12 21:47:23] -rw-------. 1 boincer umatlas       651 Oct 12 21:47 esuKDmDOFS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm5aUMDm5Ik2om.diag
[2025-10-12 21:47:23] -rw-r--r--. 1 boincer umatlas     22280 Oct 12 21:47 stderr.txt
[2025-10-12 21:47:23] HITS file was successfully produced:
[2025-10-12 21:47:23] -rw-------. 1 boincer umatlas 194715526 Oct 12 21:45 shared/HITS.pool.root.1
[2025-10-12 21:47:23]  *** Contents of shared directory: ***
[2025-10-12 21:47:23] total 407308
[2025-10-12 21:47:23] -rw-r--r--. 2 boincer umatlas 220723472 Oct 12 20:13 ATLAS.root_0
[2025-10-12 21:47:23] -rw-r--r--. 2 boincer umatlas    569684 Oct 12 20:13 input.tar.gz
[2025-10-12 21:47:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 20:13 start_atlas.sh
[2025-10-12 21:47:23] -rw-------. 1 boincer umatlas 194715526 Oct 12 21:45 HITS.pool.root.1
[2025-10-12 21:47:23] -rw-------. 1 boincer umatlas   1044480 Oct 12 21:47 result.tar.gz
21:47:24 (3828937): run_atlas exited; CPU time 23352.005663
21:47:24 (3828937): called boinc_finish(0)

</stderr_txt>
]]>

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