Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:53:10 (2395401): wrapper (7.7.26015): starting
01:53:10 (2395401): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 01:53:10] Arguments: --nthreads 3
[2025-10-13 01:53:10] Threads: 3
[2025-10-13 01:53:10] Checking for CVMFS
[2025-10-13 01:53:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:53:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:53:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:53:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:53:10] 2.9.2.0 842304 5019 82248 151641 1 57 2671619 36864001 0 130560 0 4069023 99.991 172003 967 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 01:53:10] CVMFS is ok
[2025-10-13 01:53:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:53:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:53:10] Further information can be found at the LHC@home message board.
[2025-10-13 01:53:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:53:10] Checking for apptainer binary...
[2025-10-13 01:53:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:53:10] Running /usr/bin/apptainer --version
[2025-10-13 01:53:10] apptainer version 1.4.1-1.1
[2025-10-13 01:53:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:53:11] thA330a
[2025-10-13 01:53:11] apptainer works
[2025-10-13 01:53:11] Set ATHENA_PROC_NUMBER=3
[2025-10-13 01:53:11] Set ATHENA_CORE_NUMBER=3
[2025-10-13 01:53:11] Starting ATLAS job with PandaID=6840850772
[2025-10-13 01:53:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:12:29]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:12:29] 2025-10-13 01:11:27,395 | INFO     | all data control threads have been joined
[2025-10-13 03:12:29] 2025-10-13 01:11:27,515 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:12:29] 2025-10-13 01:11:27,515 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:12:29] 2025-10-13 01:11:27,688 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:12:29] 2025-10-13 01:11:27,753 | INFO     | all payload control threads have been joined
[2025-10-13 03:12:29] 2025-10-13 01:11:27,903 | INFO     | all job control threads have been joined
[2025-10-13 03:12:29] 2025-10-13 01:11:27,997 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:12:29] 2025-10-13 01:11:28,196 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:12:29] 2025-10-13 01:11:28,210 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:12:29] 2025-10-13 01:11:28,401 | INFO     | [data] control thread has finished
[2025-10-13 03:12:29] 2025-10-13 01:11:28,448 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:12:29] 2025-10-13 01:11:28,516 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:12:29] 2025-10-13 01:11:28,678 | INFO     | [job] validate thread has finished
[2025-10-13 03:12:29] 2025-10-13 01:11:28,759 | INFO     | [payload] control thread has finished
[2025-10-13 03:12:29] 2025-10-13 01:11:28,783 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:12:29] 2025-10-13 01:11:28,881 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:12:29] 2025-10-13 01:11:28,909 | INFO     | [job] control thread has finished
[2025-10-13 03:12:29] 2025-10-13 01:11:28,943 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:12:29] 2025-10-13 01:11:32,455 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:12:29] 2025-10-13 01:11:36,833 | INFO     | job.realtimelogging is not enabled
[2025-10-13 03:12:29] 2025-10-13 01:11:37,838 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:12:29] 2025-10-13 01:11:56,265 | INFO     | PID=2399120 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:12:29] 2025-10-13 01:11:56,266 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:12:29] 2025-10-13 01:11:56,266 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:12:29] 2025-10-13 01:11:56,266 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:12:29] 2025-10-13 01:12:22,710 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:12:29] 2025-10-13 01:12:24,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140178016868160)>', '<ExcThread(monitor, started 140177397774080)>']
[2025-10-13 03:12:29] 2025-10-13 01:12:24,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:12:29] 2025-10-13 01:12:24,411 | INFO     | [monitor] control thread has ended
[2025-10-13 03:12:29] 2025-10-13 01:12:29,246 | INFO     | all workflow threads have been joined
[2025-10-13 03:12:29] 2025-10-13 01:12:29,247 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:12:29] 2025-10-13 01:12:29,247 | INFO     | traces error code: 0
[2025-10-13 03:12:29] 2025-10-13 01:12:29,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:12:29] 2025-10-13 01:12:29,298 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:12:29] 2025-10-13 01:12:29,301 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:12:29] 2025-10-13 01:12:29,303 [wrapper] pilotpid: 2399120
[2025-10-13 03:12:29] 2025-10-13 01:12:29,305 [wrapper] Pilot exit status: 0
[2025-10-13 03:12:29] 2025-10-13 01:12:29,313 [wrapper] pandaids: 6840850772
[2025-10-13 03:12:29] 2025-10-13 01:12:29,331 [wrapper] cleanup supervisor_pilot 2417341 2399121
[2025-10-13 03:12:29] 2025-10-13 01:12:29,333 [wrapper] Test setup, not cleaning
[2025-10-13 03:12:29] 2025-10-13 01:12:29,335 [wrapper] apfmon messages muted
[2025-10-13 03:12:29] 2025-10-13 01:12:29,338 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:12:29] 2025-10-13 01:12:29,340 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:12:29]  *** Error codes and diagnostics ***
[2025-10-13 03:12:29]     "exeErrorCode": 0,
[2025-10-13 03:12:29]     "exeErrorDiag": "",
[2025-10-13 03:12:29]     "pilotErrorCode": 0,
[2025-10-13 03:12:29]     "pilotErrorDiag": "",
[2025-10-13 03:12:29]  *** Listing of results directory ***
[2025-10-13 03:12:29] total 409384
[2025-10-13 03:12:29] -rw-r--r-- 1 boinc boinc    557409 Oct 12 23:57 pilot3.tar.gz
[2025-10-13 03:12:29] -rwx------ 1 boinc boinc     36292 Oct 13 00:06 runpilot2-wrapper.sh
[2025-10-13 03:12:29] -rw-r--r-- 1 boinc boinc      5112 Oct 13 00:06 queuedata.json
[2025-10-13 03:12:29] -rw-r--r-- 1 boinc boinc       100 Oct 13 01:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:12:29] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 01:53 run_atlas
[2025-10-13 03:12:29] -rw-r--r-- 1 boinc boinc       105 Oct 13 01:53 job.xml
[2025-10-13 03:12:29] -rw-r--r-- 2 boinc boinc 223297019 Oct 13 01:53 EVNT.46676267._004296.pool.root.1
[2025-10-13 03:12:29] drwxrwx--x 2 boinc boinc      4096 Oct 13 01:53 shared
[2025-10-13 03:12:29] -rw-r--r-- 2 boinc boinc    569678 Oct 13 01:53 input.tar.gz
[2025-10-13 03:12:29] -rw-r--r-- 2 boinc boinc     15120 Oct 13 01:53 start_atlas.sh
[2025-10-13 03:12:29] -rw-r--r-- 1 boinc boinc         0 Oct 13 01:53 boinc_setup_complete
[2025-10-13 03:12:29] -rw-r--r-- 1 boinc boinc      6439 Oct 13 01:53 init_data.xml
[2025-10-13 03:12:29] -rw-r--r-- 1 boinc boinc         0 Oct 13 01:53 boinc_lockfile
[2025-10-13 03:12:29] -rw-r--r-- 1 boinc boinc      2550 Oct 13 01:53 pandaJob.out
[2025-10-13 03:12:29] -rw------- 1 boinc boinc    975603 Oct 13 01:53 agis_schedconf.cvmfs.json
[2025-10-13 03:12:29] -rw------- 1 boinc boinc   1560580 Oct 13 01:53 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:12:29] drwx------ 5 boinc boinc      4096 Oct 13 01:53 pilot3
[2025-10-13 03:12:29] -rw------- 1 boinc boinc 190123738 Oct 13 03:11 HITS.46676269._090720.pool.root.1
[2025-10-13 03:12:29] -rw-r--r-- 1 boinc boinc       529 Oct 13 03:11 boinc_task_state.xml
[2025-10-13 03:12:29] -rw------- 1 boinc boinc      1017 Oct 13 03:11 memory_monitor_summary.json
[2025-10-13 03:12:29] -rw------- 1 boinc boinc    257863 Oct 13 03:11 log.46676269._090720.job.log.tgz.1
[2025-10-13 03:12:29] -rw------- 1 boinc boinc      7761 Oct 13 03:11 heartbeat.json
[2025-10-13 03:12:29] -rw------- 1 boinc boinc        95 Oct 13 03:11 pilot_heartbeat.json
[2025-10-13 03:12:29] -rw-r--r-- 1 boinc boinc        27 Oct 13 03:12 wrapper_checkpoint.txt
[2025-10-13 03:12:29] -rw-r--r-- 1 boinc boinc      8192 Oct 13 03:12 boinc_mmap_file
[2025-10-13 03:12:29] -rw------- 1 boinc boinc      5010 Oct 13 03:12 pilotlog.txt
[2025-10-13 03:12:29] -rw------- 1 boinc boinc    691874 Oct 13 03:12 log.46676269._090720.job.log.1
[2025-10-13 03:12:29] -rw------- 1 boinc boinc       357 Oct 13 03:12 output.list
[2025-10-13 03:12:29] -rw-r--r-- 1 boinc boinc       620 Oct 13 03:12 runtime_log
[2025-10-13 03:12:29] -rw------- 1 boinc boinc    972800 Oct 13 03:12 result.tar.gz
[2025-10-13 03:12:29] -rw-r--r-- 1 boinc boinc      8782 Oct 13 03:12 runtime_log.err
[2025-10-13 03:12:29] -rw------- 1 boinc boinc       659 Oct 13 03:12 4LkKDmVOJS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7nlNDmuFFI3m.diag
[2025-10-13 03:12:29] -rw-r--r-- 1 boinc boinc      6829 Oct 13 03:12 stderr.txt
[2025-10-13 03:12:29] HITS file was successfully produced:
[2025-10-13 03:12:29] -rw------- 1 boinc boinc 190123738 Oct 13 03:11 shared/HITS.pool.root.1
[2025-10-13 03:12:29]  *** Contents of shared directory: ***
[2025-10-13 03:12:29] total 405268
[2025-10-13 03:12:29] -rw-r--r-- 2 boinc boinc 223297019 Oct 13 01:53 ATLAS.root_0
[2025-10-13 03:12:29] -rw-r--r-- 2 boinc boinc    569678 Oct 13 01:53 input.tar.gz
[2025-10-13 03:12:29] -rw-r--r-- 2 boinc boinc     15120 Oct 13 01:53 start_atlas.sh
[2025-10-13 03:12:29] -rw------- 1 boinc boinc 190123738 Oct 13 03:11 HITS.pool.root.1
[2025-10-13 03:12:29] -rw------- 1 boinc boinc    972800 Oct 13 03:12 result.tar.gz
03:12:30 (2395401): run_atlas exited; CPU time 13455.354094
03:12:30 (2395401): called boinc_finish(0)

</stderr_txt>
]]>

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