Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:56:17 (2115968): wrapper (7.7.26015): starting
19:56:17 (2115968): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:56:17] Arguments: --nthreads 8
[2025-10-12 19:56:17] Threads: 8
[2025-10-12 19:56:17] Checking for CVMFS
[2025-10-12 19:56:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:56:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:56:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:56:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:56:20] 2.13.2.0 2935877 124637 604576 151641 1 563 33887335 40960000 57343 16776704 0 579130314 99.771 352567352 17521 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 19:56:20] CVMFS is ok
[2025-10-12 19:56:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:56:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:56:20] Further information can be found at the LHC@home message board.
[2025-10-12 19:56:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:56:20] Checking for apptainer binary...
[2025-10-12 19:56:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:56:20] Running /usr/bin/apptainer --version
[2025-10-12 19:56:20] apptainer version 1.4.3-1.el9
[2025-10-12 19:56:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:56:21] c7-2-17.aglt2.org
[2025-10-12 19:56:21] apptainer works
[2025-10-12 19:56:21] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:56:21] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:56:21] Starting ATLAS job with PandaID=6840715302
[2025-10-12 19:56:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:18:04]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:18:04] 2025-10-13 02:17:29,859 | INFO     | monitor loop #531: job 0:6840715302 is in state 'finished'
[2025-10-12 22:18:04] 2025-10-13 02:17:29,859 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:18:04] 2025-10-13 02:17:30,291 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 22:18:04] 2025-10-13 02:17:30,310 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3532.8985416666687
[2025-10-12 22:18:04] 2025-10-13 02:17:30,334 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840715302/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:18:04] 2025-10-13 02:17:30,335 | INFO     | extracted standard info from prmon json
[2025-10-12 22:18:04] 2025-10-13 02:17:30,335 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:18:04] 2025-10-13 02:17:30,335 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:18:04] 2025-10-13 02:17:30,335 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:18:04] 2025-10-13 02:17:30,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:18:04] 2025-10-13 02:17:30,337 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:18:04] 2025-10-13 02:17:30,338 | INFO     | sum of square deviations: 779997149.3823526
[2025-10-12 22:18:04] 2025-10-13 02:17:30,348 | INFO     | sum of deviations: 10010622477.926472
[2025-10-12 22:18:04] 2025-10-13 02:17:30,349 | INFO     | mean x: 1760317697.7205882
[2025-10-12 22:18:04] 2025-10-13 02:17:30,349 | INFO     | mean y: 2123861.919117647
[2025-10-12 22:18:04] 2025-10-13 02:17:30,349 | INFO     | -- intersect: -22590107311.03777
[2025-10-12 22:18:04] 2025-10-13 02:17:30,349 | INFO     | intersect: -22590107311.03777
[2025-10-12 22:18:04] 2025-10-13 02:17:30,349 | INFO     | chi2: 3.735564313973156
[2025-10-12 22:18:04] 2025-10-13 02:17:30,349 | INFO     | sum of square deviations: 697102419.1297699
[2025-10-12 22:18:04] 2025-10-13 02:17:30,350 | INFO     | sum of deviations: 17820964772.015266
[2025-10-12 22:18:04] 2025-10-13 02:17:30,350 | INFO     | mean x: 1760317545.2290077
[2025-10-12 22:18:04] 2025-10-13 02:17:30,350 | INFO     | mean y: 2137790.7328244275
[2025-10-12 22:18:04] 2025-10-13 02:17:30,350 | INFO     | -- intersect: -44999222268.020195
[2025-10-12 22:18:04] 2025-10-13 02:17:30,350 | INFO     | intersect: -44999222268.020195
[2025-10-12 22:18:04] 2025-10-13 02:17:30,350 | INFO     | chi2: 2.9997729799507304
[2025-10-12 22:18:04] 2025-10-13 02:17:30,350 | INFO     | current chi2=2.9997729799507304 (change=19.696925877307034 %)
[2025-10-12 22:18:04] 2025-10-13 02:17:30,350 | INFO     | right removable region: 130
[2025-10-12 22:18:04] 2025-10-13 02:17:30,351 | INFO     | sum of square deviations: 697084119.1297699
[2025-10-12 22:18:04] 2025-10-13 02:17:30,351 | INFO     | sum of deviations: -18313081379.885498
[2025-10-12 22:18:04] 2025-10-13 02:17:30,351 | INFO     | mean x: 1760317850.2290077
[2025-10-12 22:18:04] 2025-10-13 02:17:30,351 | INFO     | mean y: 2175556.4961832063
[2025-10-12 22:18:04] 2025-10-13 02:17:30,351 | INFO     | -- intersect: 46247446623.570465
[2025-10-12 22:18:04] 2025-10-13 02:17:30,351 | INFO     | intersect: 46247446623.570465
[2025-10-12 22:18:04] 2025-10-13 02:17:30,351 | INFO     | chi2: 1.1285321672476598
[2025-10-12 22:18:04] 2025-10-13 02:17:30,351 | INFO     | current chi2=1.1285321672476598 (change=69.78951311248206 %)
[2025-10-12 22:18:04] 2025-10-13 02:17:30,352 | INFO     | sum of square deviations: 620272216.8253978
[2025-10-12 22:18:04] 2025-10-13 02:17:30,352 | INFO     | sum of deviations: -18061514901.77777
[2025-10-12 22:18:04] 2025-10-13 02:17:30,352 | INFO     | mean x: 1760318002.7301588
[2025-10-12 22:18:04] 2025-10-13 02:17:30,352 | INFO     | mean y: 2174811.388888889
[2025-10-12 22:18:04] 2025-10-13 02:17:30,352 | INFO     | -- intersect: 51260330465.85733
[2025-10-12 22:18:04] 2025-10-13 02:17:30,352 | INFO     | intersect: 51260330465.85733
[2025-10-12 22:18:04] 2025-10-13 02:17:30,352 | INFO     | chi2: 1.0268983491098853
[2025-10-12 22:18:04] 2025-10-13 02:17:30,352 | INFO     | current chi2=1.0268983491098853 (change=9.00584148927238 %)
[2025-10-12 22:18:04] 2025-10-13 02:17:30,353 | INFO     | left removable region: 20
[2025-10-12 22:18:04] 2025-10-13 02:17:30,353 | INFO     | sum of square deviations: 412707759.85454476
[2025-10-12 22:18:04] 2025-10-13 02:17:30,353 | INFO     | sum of deviations: 764555286.290909
[2025-10-12 22:18:04] 2025-10-13 02:17:30,353 | INFO     | mean x: 1760318124.7636364
[2025-10-12 22:18:04] 2025-10-13 02:17:30,353 | INFO     | mean y: 2166067.4727272727
[2025-10-12 22:18:04] 2025-10-13 02:17:30,353 | INFO     | -- intersect: -3258883660.10224
[2025-10-12 22:18:04] 2025-10-13 02:17:30,353 | INFO     | intersect: -3258883660.10224
[2025-10-12 22:18:04] 2025-10-13 02:17:30,353 | INFO     | chi2: 0.03590007667750905
[2025-10-12 22:18:04] 2025-10-13 02:17:30,354 | INFO     | -- intersect: -3258883660.10224
[2025-10-12 22:18:04] 2025-10-13 02:17:30,354 | INFO     | current memory leak: 1.85 B/s (using 110 data points, chi2=0.04)
[2025-10-12 22:18:04] 2025-10-13 02:17:30,354 | INFO     | could have reported an average CPU frequency of 3553 MHz (8 samples)
[2025-10-12 22:18:04] 2025-10-13 02:17:30,354 | INFO     | ..............................
[2025-10-12 22:18:04] 2025-10-13 02:17:30,355 | INFO     | . Timing measurements:
[2025-10-12 22:18:04] 2025-10-13 02:17:30,355 | INFO     | . get job = 0 s
[2025-10-12 22:18:04] 2025-10-13 02:17:30,355 | INFO     | . initial setup = 7 s
[2025-10-12 22:18:04] 2025-10-13 02:17:30,355 | INFO     | . payload setup = 40 s
[2025-10-12 22:18:04] 2025-10-13 02:17:30,355 | INFO     | . stage-in = 0 s
[2025-10-12 22:18:04] 2025-10-13 02:17:30,355 | INFO     | . payload execution = 8270 s
[2025-10-12 22:18:04] 2025-10-13 02:17:30,355 | INFO     | . stage-out = 1 s
[2025-10-12 22:18:04] 2025-10-13 02:17:30,355 | INFO     | . log creation = 0 s
[2025-10-12 22:18:04] 2025-10-13 02:17:30,355 | INFO     | ..............................
[2025-10-12 22:18:04] 2025-10-13 02:17:30,560 | INFO     | 
[2025-10-12 22:18:04] 2025-10-13 02:17:30,560 | INFO     | job summary report
[2025-10-12 22:18:04] 2025-10-13 02:17:30,560 | INFO     | --------------------------------------------------
[2025-10-12 22:18:04] 2025-10-13 02:17:30,560 | INFO     | PanDA job id: 6840715302
[2025-10-12 22:18:04] 2025-10-13 02:17:30,560 | INFO     | task id: 46676269
[2025-10-12 22:18:04] 2025-10-13 02:17:30,560 | INFO     | errors: (none)
[2025-10-12 22:18:04] 2025-10-13 02:17:30,560 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:18:04] 2025-10-13 02:17:30,561 | INFO     | pilot state: finished 
[2025-10-12 22:18:04] 2025-10-13 02:17:30,561 | INFO     | transexitcode: 0
[2025-10-12 22:18:04] 2025-10-13 02:17:30,561 | INFO     | exeerrorcode: 0
[2025-10-12 22:18:04] 2025-10-13 02:17:30,561 | INFO     | exeerrordiag: 
[2025-10-12 22:18:04] 2025-10-13 02:17:30,561 | INFO     | exitcode: 0
[2025-10-12 22:18:04] 2025-10-13 02:17:30,561 | INFO     | exitmsg: OK
[2025-10-12 22:18:04] 2025-10-13 02:17:30,561 | INFO     | cpuconsumptiontime: 27583 s
[2025-10-12 22:18:04] 2025-10-13 02:17:30,561 | INFO     | nevents: 400
[2025-10-12 22:18:04] 2025-10-13 02:17:30,561 | INFO     | neventsw: 0
[2025-10-12 22:18:04] 2025-10-13 02:17:30,561 | INFO     | pid: 2135733
[2025-10-12 22:18:04] 2025-10-13 02:17:30,561 | INFO     | pgrp: 2135733
[2025-10-12 22:18:04] 2025-10-13 02:17:30,561 | INFO     | corecount: 8
[2025-10-12 22:18:04] 2025-10-13 02:17:30,561 | INFO     | event service: False
[2025-10-12 22:18:04] 2025-10-13 02:17:30,561 | INFO     | sizes: {0: 2347978, 1: 2348663, 2: 2348862, 13: 2348862, 24: 2348918, 33: 2349208, 35: 2349392, 8314: 2377108, 8315: 2377107, 8317: 2386217, 8330: 2386355}
[2025-10-12 22:18:04] 2025-10-13 02:17:30,561 | INFO     | --------------------------------------------------
[2025-10-12 22:18:04] 2025-10-13 02:17:30,561 | INFO     | 
[2025-10-12 22:18:04] 2025-10-13 02:17:30,561 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 22:18:04] 2025-10-13 02:17:30,680 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:18:04] 2025-10-13 02:17:30,680 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:18:04] 2025-10-13 02:17:30,680 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:18:04] 2025-10-13 02:17:30,680 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:18:04] 2025-10-13 02:17:30,680 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:18:04] 2025-10-13 02:17:30,680 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:18:04] 2025-10-13 02:17:30,680 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:18:04] 2025-10-13 02:17:30,681 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:18:04] 2025-10-13 02:17:30,681 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:18:04] 2025-10-13 02:17:30,681 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:18:04] 2025-10-13 02:17:30,681 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:18:04] 2025-10-13 02:17:30,681 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:18:04] 2025-10-13 02:17:30,681 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:18:04] 2025-10-13 02:17:30,681 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:18:04] 2025-10-13 02:17:30,681 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:18:04] 2025-10-13 02:17:30,681 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:18:04] 2025-10-13 02:17:30,681 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:18:04] 2025-10-13 02:17:30,681 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:18:04] 2025-10-13 02:17:30,681 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:18:04] 2025-10-13 02:17:30,681 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:18:04] 2025-10-13 02:17:30,681 | INFO     | job 6840715302 has completed (purged errors)
[2025-10-12 22:18:04] 2025-10-13 02:17:30,681 | INFO     | overall cleanup function is called
[2025-10-12 22:18:04] 2025-10-13 02:17:31,694 | INFO     | --- collectZombieJob: --- 10, [2135733]
[2025-10-12 22:18:04] 2025-10-13 02:17:31,694 | INFO     | zombie collector waiting for pid 2135733
[2025-10-12 22:18:04] 2025-10-13 02:17:31,694 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:18:04] 2025-10-13 02:17:31,695 | INFO     | collected zombie processes
[2025-10-12 22:18:04] 2025-10-13 02:17:31,695 | INFO     | will attempt to kill all subprocesses of pid=2135733
[2025-10-12 22:18:04] 2025-10-13 02:17:33,112 | INFO     | process IDs to be killed: [2135733] (in reverse order)
[2025-10-12 22:18:04] 2025-10-13 02:17:33,416 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:18:04] 2025-10-13 02:17:33,417 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:18:04] 2025-10-13 02:17:33,449 | INFO     | did not find any defunct processes belonging to 2135733
[2025-10-12 22:18:04] 2025-10-13 02:17:33,477 | INFO     | did not find any defunct processes belonging to 2135733
[2025-10-12 22:18:04] 2025-10-13 02:17:33,478 | INFO     | ready for new job
[2025-10-12 22:18:04] 2025-10-13 02:17:33,478 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:18:04] 2025-10-13 02:17:33,480 | INFO     | ***************************************
[2025-10-12 22:18:04] 2025-10-13 02:17:33,481 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:18:04] 2025-10-13 02:17:33,481 | INFO     | ***************************************
[2025-10-12 22:18:04] 2025-10-13 02:17:33,481 | INFO     | 
[2025-10-12 22:18:04] 2025-10-13 02:17:33,507 | INFO     | architecture information:
[2025-10-12 22:18:04] 2025-10-13 02:17:33,524 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:18:04] 2025-10-13 02:17:33,570 | INFO     | cat /etc/os-release:
[2025-10-12 22:18:04] NAME="CentOS Linux"
[2025-10-12 22:18:04] VERSION="7 (Core)"
[2025-10-12 22:18:04] ID="centos"
[2025-10-12 22:18:04] ID_LIKE="rhel fedora"
[2025-10-12 22:18:04] VERSION_ID="7"
[2025-10-12 22:18:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:18:04] ANSI_COLOR="0;31"
[2025-10-12 22:18:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:18:04] HOME_URL="https://www.centos.org/"
[2025-10-12 22:18:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:18:04] 
[2025-10-12 22:18:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:18:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:18:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:18:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:18:04] 
[2025-10-12 22:18:04] 2025-10-13 02:17:33,570 | INFO     | ***************************************
[2025-10-12 22:18:04] 2025-10-13 02:17:34,074 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 22:18:04] 2025-10-13 02:17:34,139 | INFO     | sufficient remaining disk space (127211143168 B)
[2025-10-12 22:18:04] 2025-10-13 02:17:34,141 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:18:04] 2025-10-13 02:17:34,141 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:18:04] 2025-10-13 02:17:34,141 | INFO     | update_server=False
[2025-10-12 22:18:04] 2025-10-13 02:17:34,141 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:18:04] 2025-10-13 02:17:34,142 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:18:04] 2025-10-13 02:17:34,143 | INFO     | aborting loop
[2025-10-12 22:18:04] 2025-10-13 02:17:34,568 | INFO     | all data control threads have been joined
[2025-10-12 22:18:04] 2025-10-13 02:17:34,680 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:18:04] 2025-10-13 02:17:34,879 | INFO     | all job control threads have been joined
[2025-10-12 22:18:04] 2025-10-13 02:17:35,148 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:18:04] 2025-10-13 02:17:35,152 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:18:04] 2025-10-13 02:17:35,335 | INFO     | all payload control threads have been joined
[2025-10-12 22:18:04] 2025-10-13 02:17:35,408 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:18:04] 2025-10-13 02:17:35,585 | INFO     | [data] control thread has finished
[2025-10-12 22:18:04] 2025-10-13 02:17:35,593 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:18:04] 2025-10-13 02:17:35,886 | INFO     | [job] control thread has finished
[2025-10-12 22:18:04] 2025-10-13 02:17:35,899 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:18:04] 2025-10-13 02:17:36,069 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:18:04] 2025-10-13 02:17:36,170 | INFO     | [job] validate thread has finished
[2025-10-12 22:18:04] 2025-10-13 02:17:36,341 | INFO     | [payload] control thread has finished
[2025-10-12 22:18:04] 2025-10-13 02:17:36,422 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:18:04] 2025-10-13 02:17:36,426 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:18:04] 2025-10-13 02:17:36,474 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:18:04] 2025-10-13 02:17:36,567 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:18:04] 2025-10-13 02:17:36,600 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:18:04] 2025-10-13 02:17:36,673 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:18:04] 2025-10-13 02:17:36,687 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:18:04] 2025-10-13 02:17:40,454 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:18:04] 2025-10-13 02:17:47,507 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:18:04] 2025-10-13 02:17:47,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140214078646080)>', '<ExcThread(monitor, started 140213728814848)>']
[2025-10-12 22:18:04] 2025-10-13 02:17:52,994 | INFO     | all workflow threads have been joined
[2025-10-12 22:18:04] 2025-10-13 02:17:53,002 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:18:04] 2025-10-13 02:17:53,002 | INFO     | traces error code: 0
[2025-10-12 22:18:04] 2025-10-13 02:17:53,003 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:18:04] 2025-10-13 02:18:03,400 | INFO     | PID=2123079 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:18:04] 2025-10-13 02:18:03,401 | INFO     | .. there are 88 such processes running
[2025-10-12 22:18:04] 2025-10-13 02:18:03,401 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:18:04] 2025-10-13 02:18:03,401 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:18:04] 2025-10-13 02:18:03,401 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:18:04] 2025-10-13 02:18:03,401 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:18:04] 2025-10-13 02:18:03,401 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 22:18:04] 2025-10-13 02:18:03,401 | INFO     | [monitor] control thread has ended
[2025-10-12 22:18:04] 2025-10-13 02:18:03,840 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:18:04] 2025-10-13 02:18:03,860 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:18:04] 2025-10-13 02:18:03,862 [wrapper] pilotpid: 2123079
[2025-10-12 22:18:04] 2025-10-13 02:18:03,867 [wrapper] Pilot exit status: 0
[2025-10-12 22:18:04] 2025-10-13 02:18:03,907 [wrapper] pandaids: 6840715302
[2025-10-12 22:18:04] 2025-10-13 02:18:04,109 [wrapper] cleanup supervisor_pilot 3531647 2123080
[2025-10-12 22:18:04] 2025-10-13 02:18:04,135 [wrapper] Test setup, not cleaning
[2025-10-12 22:18:04] 2025-10-13 02:18:04,151 [wrapper] apfmon messages muted
[2025-10-12 22:18:04] 2025-10-13 02:18:04,154 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:18:04] 2025-10-13 02:18:04,160 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:18:04]  *** Error codes and diagnostics ***
[2025-10-12 22:18:04]     "exeErrorCode": 0,
[2025-10-12 22:18:04]     "exeErrorDiag": "",
[2025-10-12 22:18:04]     "pilotErrorCode": 0,
[2025-10-12 22:18:04]     "pilotErrorDiag": "",
[2025-10-12 22:18:04]  *** Listing of results directory ***
[2025-10-12 22:18:04] total 409904
[2025-10-12 22:18:04] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 15:50 pilot3.tar.gz
[2025-10-12 22:18:04] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:03 queuedata.json
[2025-10-12 22:18:04] -rwx------. 1 boincer umatlas     36292 Oct 12 16:04 runpilot2-wrapper.sh
[2025-10-12 22:18:04] -rw-r--r--. 1 boincer umatlas       100 Oct 12 19:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:18:04] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 19:56 run_atlas
[2025-10-12 22:18:04] -rw-r--r--. 1 boincer umatlas       105 Oct 12 19:56 job.xml
[2025-10-12 22:18:04] -rw-r--r--. 2 boincer umatlas 219464889 Oct 12 19:56 EVNT.46676267._004484.pool.root.1
[2025-10-12 22:18:04] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 19:56 shared
[2025-10-12 22:18:04] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 19:56 input.tar.gz
[2025-10-12 22:18:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:56 start_atlas.sh
[2025-10-12 22:18:04] -rw-r--r--. 1 boincer umatlas         0 Oct 12 19:56 boinc_lockfile
[2025-10-12 22:18:04] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 19:56 pandaJob.out
[2025-10-12 22:18:04] -rw-------. 1 boincer umatlas    975603 Oct 12 19:57 agis_schedconf.cvmfs.json
[2025-10-12 22:18:04] -rw-------. 1 boincer umatlas   1560580 Oct 12 19:57 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:18:04] drwx------. 5 boincer umatlas      4096 Oct 12 19:57 pilot3
[2025-10-12 22:18:04] -rw-r--r--. 1 boincer umatlas      6937 Oct 12 22:13 init_data.xml
[2025-10-12 22:18:04] -rw-------. 1 boincer umatlas 193427597 Oct 12 22:16 HITS.46676269._088254.pool.root.1
[2025-10-12 22:18:04] -rw-r--r--. 1 boincer umatlas       530 Oct 12 22:16 boinc_task_state.xml
[2025-10-12 22:18:04] -rw-------. 1 boincer umatlas      1048 Oct 12 22:17 memory_monitor_summary.json
[2025-10-12 22:18:04] -rw-------. 1 boincer umatlas    391029 Oct 12 22:17 log.46676269._088254.job.log.tgz.1
[2025-10-12 22:18:04] -rw-------. 1 boincer umatlas        95 Oct 12 22:17 pilot_heartbeat.json
[2025-10-12 22:18:04] -rw-------. 1 boincer umatlas      7777 Oct 12 22:17 heartbeat.json
[2025-10-12 22:18:04] -rw-------. 1 boincer umatlas       893 Oct 12 22:18 pilotlog.txt
[2025-10-12 22:18:04] -rw-------. 1 boincer umatlas   1089426 Oct 12 22:18 log.46676269._088254.job.log.1
[2025-10-12 22:18:04] -rw-r--r--. 1 boincer umatlas        27 Oct 12 22:18 wrapper_checkpoint.txt
[2025-10-12 22:18:04] -rw-------. 1 boincer umatlas       357 Oct 12 22:18 output.list
[2025-10-12 22:18:04] -rw-r--r--. 1 boincer umatlas       620 Oct 12 22:18 runtime_log
[2025-10-12 22:18:04] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 22:18 boinc_mmap_file
[2025-10-12 22:18:04] -rw-------. 1 boincer umatlas   1495040 Oct 12 22:18 result.tar.gz
[2025-10-12 22:18:04] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 22:18 runtime_log.err
[2025-10-12 22:18:04] -rw-------. 1 boincer umatlas       651 Oct 12 22:18 Jh1KDm8THS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiNlNDmigCKBn.diag
[2025-10-12 22:18:04] -rw-r--r--. 1 boincer umatlas     12624 Oct 12 22:18 stderr.txt
[2025-10-12 22:18:04] HITS file was successfully produced:
[2025-10-12 22:18:04] -rw-------. 1 boincer umatlas 193427597 Oct 12 22:16 shared/HITS.pool.root.1
[2025-10-12 22:18:04]  *** Contents of shared directory: ***
[2025-10-12 22:18:04] total 405264
[2025-10-12 22:18:04] -rw-r--r--. 2 boincer umatlas 219464889 Oct 12 19:56 ATLAS.root_0
[2025-10-12 22:18:04] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 19:56 input.tar.gz
[2025-10-12 22:18:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 19:56 start_atlas.sh
[2025-10-12 22:18:04] -rw-------. 1 boincer umatlas 193427597 Oct 12 22:16 HITS.pool.root.1
[2025-10-12 22:18:04] -rw-------. 1 boincer umatlas   1495040 Oct 12 22:18 result.tar.gz
22:18:06 (2115968): run_atlas exited; CPU time 27997.459147
22:18:06 (2115968): called boinc_finish(0)

</stderr_txt>
]]>

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